F388245
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 287 | 160 | 574 | 643 |
Family's Representative Sequence
| Representative Sequence | 3300049581|Ga0501047_0011477|Ga0501047_0011477_3959_6025 |
| Length | 688 |
| Sequence | MNTTHLPFLESAEAQQHLRPLDLAFARFLAERDAQAPPALLLLATLLSRQLADGHLCLDLTLLHALATEQGWPPAWRALTDTLDADTLRGMASPLLANARDGMPAAAPLVLDGNRLYLRRHWNHEREVAQGIAARLARPTPLPAHLADELDHLFPPLGTAPDEPDWPRIACALAARGAFSVITGGPGTGKTTTVVRLLGLLQTLHLREQPRPLRIRLAAPTGKAAARLNASIATQLAQLDVGDAVRAAIPAQVDTLHRLLGARPDSRRFRHDRDNPLHLDVLVIDEASMIDLEMMAAVLAALPAQARLVLLGDKDQLSSVEAGAVLGDLCRRAEAGHYNPATAGWLRDAGCGDIAPFVGDDARPLDQQVAMLRHSHRFAAGSGIGRLAQAVNGSDAAAVRELLAAPGDDLAWSADDSHVIPIAIDGRADGMPADGAPKGYRHYLEQLRRERPAADAGDHAFVAWADRILQAYAQFQWLCALRHGPFGTQTLNQRIAAALLASGLIEADHGWYEGRPVMVLRNDYTLGLMNGDVGIALRRPGHDGSLRLYVAFPDTRADAAAPVRFVLPSRLEETDTVYAMTVHKSQGSEFGHTALLLPDQATSLLTRELLYTGITRARRHFTLVAPLASIELAVSQRTRRHSGLAKRLIDSTAFARHSREALLQQPKGWSSGNPSGSAQQPGFPPSRE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 2 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 3 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 4 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 5 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 6 | 3300002771 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB | Metagenome | Endosphere |
| 7 | 3300002772 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS | Metagenome | Endosphere |
| 8 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 9 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 10 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 11 | 3300003751 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 | Metagenome | Endosphere |
| 12 | 3300003752 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 | Metagenome | Endosphere |
| 13 | 3300003756 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 | Metagenome | Endosphere |
| 14 | 3300003759 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 | Metagenome | Endosphere |
| 15 | 3300003760 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 | Metagenome | Endosphere |
| 16 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 17 | 3300003762 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 | Metagenome | Endosphere |
| 18 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 19 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 20 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 21 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 22 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 24 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 25 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 26 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 27 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 28 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 29 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 30 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300012500 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 | Metagenome | Rhizosphere |
| 35 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 41 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 43 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 44 | 3300015687 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 | Metagenome | Rhizosphere |
| 45 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300025224 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 47 | 3300025225 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025226 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 49 | 3300025228 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 50 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 55 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 56 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 58 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 59 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 75 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 76 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 77 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 78 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 79 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 80 | 3300044672 | Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E | Metagenome | Unclassified |
| 81 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 82 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 83 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 84 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 85 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 86 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 87 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 88 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 89 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 90 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 91 | 3300046452 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300047446 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 117 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 118 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 119 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 120 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 121 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 122 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 123 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 124 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 125 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 126 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 127 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 128 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 129 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 130 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 131 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 132 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 133 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300049460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 137 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 138 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 139 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 140 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 141 | 3300053103 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere | Metagenome | Endosphere |
| 142 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 143 | 2593339238 | Luteibacter sp. UNCMF366Tsu5.1 | Isolate | Unclassified |
| 144 | 2593339239 | Luteibacter sp. UNCMF331Sha3.1 | Isolate | Unclassified |
| 145 | 2643221577 | Rhodanobacter sp. Root627 | Isolate | Unclassified |
| 146 | 2643221685 | Rhodanobacter sp. Root480 | Isolate | Unclassified |
| 147 | 2718218334 | Luteibacter rhizovicinus LJ96 | Isolate | Rhizosphere |
| 148 | 2734482264 | Dyella sp. AD052 | Isolate | Unclassified |
| 149 | 2738543009 | Luteibacter sp. OK325 | Isolate | Unclassified |
| 150 | 2739367700 | Dyella sp. YR388 | Isolate | Unclassified |
| 151 | 2818991440 | Luteibacter yeojuensis 583 | Isolate | Unclassified |
| 152 | 2842914999 | Luteibacter sp. R-72151 | Isolate | Unclassified |
| 153 | 2884338543 | Luteibacter pinisoli MAH-14 | Isolate | Rhizosphere |
| 154 | 2884411467 | Dyella sp. AD56 | Isolate | Rhizosphere |
| 155 | 2895395659 | Rhodanobacter sp. T12-5 | Isolate | Unclassified |
| 156 | 2904463128 | Luteibacter yeojuensis 3191 | Isolate | Unclassified |
| 157 | 2919085039 | Luteibacter sp. 1214 | Isolate | Unclassified |
| 158 | 2919404418 | Luteibacter sp. 3190 | Isolate | Unclassified |
| 159 | 2928963466 | Dyella japonica 1073 | Isolate | Unclassified |
| 160 | 2941471342 | Luteibacter sp. 621 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.38 |
| Metatranscriptomes | 0.35 |
| Isolates | 6.27 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 26.13 |
| Nodule | 0 |
| Rhizoplane | 3.48 |
| Rhizosphere | 50.17 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0501047_0011477 | 3300049581 | Bacteria | 8384 |
| 2 | JGI24737J22298_10005481 | 3300001990 | Bacteria | 4380 |
| 3 | JGI25156J39149_1003334 | 3300002705 | Bacteria | 5303 |
| 4 | JGI25162J39368_1000028 | 3300002737 | Bacteria | 221876 |
| 5 | JGI25162J39368_1000236 | 3300002737 | Bacteria | 55248 |
| 6 | JGI25162J39368_1000484 | 3300002737 | Bacteria | 30422 |
| 7 | JGI25157J39369_1000068 | 3300002741 | Bacteria | 94833 |
| 8 | JGI25157J39369_1000126 | 3300002741 | Bacteria | 65430 |
| 9 | JGI25157J39369_1000266 | 3300002741 | Bacteria | 38247 |
| 10 | JGI25157J39369_1001887 | 3300002741 | Bacteria | 6422 |
| 11 | JGI25157J39369_1002765 | 3300002741 | Bacteria | 4024 |
| 12 | JGI25163J39215_1000096 | 3300002771 | Bacteria | 36239 |
| 13 | JGI25164J39214_1000012 | 3300002772 | Bacteria | 255140 |
| 14 | JGI25164J39214_1000113 | 3300002772 | Bacteria | 78046 |
| 15 | JGI25165J46597_1000048 | 3300003214 | Bacteria | 254392 |
| 16 | JGI25165J46597_1000158 | 3300003214 | Bacteria | 108257 |
| 17 | rootH2_10006739 | 3300003320 | Bacteria | 31620 |
| 18 | Ga0006562J51391_1040015 | 3300003578 | Bacteria | 4147 |
| 19 | Ga0055538_1000601 | 3300003751 | Bacteria | 11956 |
| 20 | Ga0055539_1001682 | 3300003752 | Bacteria | 3918 |
| 21 | Ga0055533_1000275 | 3300003756 | Bacteria | 28133 |
| 22 | Ga0055525_1000239 | 3300003759 | Bacteria | 57171 |
| 23 | Ga0055527_1000066 | 3300003760 | Bacteria | 88276 |
| 24 | Ga0055527_1000136 | 3300003760 | Bacteria | 52239 |
| 25 | Ga0055527_1002177 | 3300003760 | Bacteria | 3470 |
| 26 | Ga0055535_1000027 | 3300003761 | Bacteria | 202056 |
| 27 | Ga0055535_1000058 | 3300003761 | Bacteria | 125370 |
| 28 | Ga0055535_1000149 | 3300003761 | Bacteria | 74091 |
| 29 | Ga0055535_1000151 | 3300003761 | Bacteria | 74028 |
| 30 | Ga0055535_1000427 | 3300003761 | Bacteria | 39418 |
| 31 | Ga0055535_1000990 | 3300003761 | Bacteria | 18357 |
| 32 | Ga0055542_1000034 | 3300003762 | Bacteria | 231972 |
| 33 | Ga0055542_1000067 | 3300003762 | Bacteria | 154585 |
| 34 | Ga0055542_1000085 | 3300003762 | Bacteria | 125370 |
| 35 | Ga0055542_1000134 | 3300003762 | Bacteria | 94890 |
| 36 | Ga0055542_1000315 | 3300003762 | Bacteria | 52239 |
| 37 | Ga0055542_1000503 | 3300003762 | Bacteria | 35709 |
| 38 | Ga0055529_1000056 | 3300003763 | Bacteria | 196316 |
| 39 | Ga0055529_1000173 | 3300003763 | Bacteria | 88663 |
| 40 | Ga0055529_1000240 | 3300003763 | Bacteria | 68255 |
| 41 | Ga0055529_1002254 | 3300003763 | Bacteria | 3919 |
| 42 | Ga0065165_1000186 | 3300005262 | Bacteria | 108712 |
| 43 | Ga0070682_100018577 | 3300005337 | Bacteria | 4068 |
| 44 | Ga0070689_100016504 | 3300005340 | Bacteria | 5404 |
| 45 | Ga0070714_100000245 | 3300005435 | Bacteria | 42373 |
| 46 | Ga0070685_10005616 | 3300005466 | Bacteria | 6362 |
| 47 | Ga0068853_100033125 | 3300005539 | Bacteria | 4382 |
| 48 | Ga0068855_100005665 | 3300005563 | Bacteria | 15250 |
| 49 | Ga0068855_100013113 | 3300005563 | Bacteria | 9995 |
| 50 | Ga0068857_100047885 | 3300005577 | Bacteria | 3796 |
| 51 | Ga0068854_100002097 | 3300005578 | Bacteria | 12219 |
| 52 | Ga0068856_100000562 | 3300005614 | Bacteria | 40765 |
| 53 | Ga0068856_100025615 | 3300005614 | Bacteria | 5752 |
| 54 | Ga0068858_100072134 | 3300005842 | Bacteria | 3204 |
| 55 | Ga0105240_10002111 | 3300009093 | Bacteria | 32519 |
| 56 | Ga0105240_10002149 | 3300009093 | Bacteria | 32197 |
| 57 | Ga0105240_10013684 | 3300009093 | Bacteria | 11126 |
| 58 | Ga0105240_10016107 | 3300009093 | Bacteria | 10129 |
| 59 | Ga0105240_10088387 | 3300009093 | Bacteria | 3792 |
| 60 | Ga0105240_10229582 | 3300009093 | Bacteria | 2158 |
| 61 | Ga0105237_10000183 | 3300009545 | Bacteria | 88412 |
| 62 | Ga0105237_10010121 | 3300009545 | Bacteria | 10052 |
| 63 | Ga0105238_10031616 | 3300009551 | Bacteria | 5389 |
| 64 | Ga0105239_10000020 | 3300010375 | Bacteria | 264435 |
| 65 | Ga0157314_1000311 | 3300012500 | Bacteria | 5071 |
| 66 | Ga0157373_10003397 | 3300013100 | Bacteria | 12043 |
| 67 | Ga0157371_10005085 | 3300013102 | Bacteria | 11226 |
| 68 | Ga0157371_10010920 | 3300013102 | Bacteria | 7041 |
| 69 | Ga0157370_10000044 | 3300013104 | Bacteria | 131302 |
| 70 | Ga0157370_10006373 | 3300013104 | Bacteria | 13022 |
| 71 | Ga0157369_10001035 | 3300013105 | Bacteria | 35142 |
| 72 | Ga0157372_10007437 | 3300013307 | Bacteria | 11648 |
| 73 | Ga0182008_10019669 | 3300014497 | Bacteria | 3484 |
| 74 | Ga0157376_10126819 | 3300014969 | Bacteria | 2271 |
| 75 | Ga0182006_1001006 | 3300015261 | Bacteria | 18442 |
| 76 | Ga0182006_1014570 | 3300015261 | Bacteria | 3386 |
| 77 | Ga0182005_1000205 | 3300015265 | Bacteria | 39713 |
| 78 | Ga0183368_1003 | 3300015687 | Bacteria | 1276390 |
| 79 | Ga0163161_10002184 | 3300017792 | Bacteria | 14110 |
| 80 | Ga0163161_10060616 | 3300017792 | Bacteria | 2754 |
| 81 | Ga0209784_100016 | 3300025224 | Bacteria | 481036 |
| 82 | Ga0209566_102569 | 3300025225 | Bacteria | 3260 |
| 83 | Ga0209674_100012 | 3300025226 | Bacteria | 950162 |
| 84 | Ga0209672_100007 | 3300025228 | Bacteria | 959482 |
| 85 | Ga0209672_100018 | 3300025228 | Bacteria | 432924 |
| 86 | Ga0209672_100161 | 3300025228 | Bacteria | 57457 |
| 87 | Ga0209672_101141 | 3300025228 | Bacteria | 10995 |
| 88 | Ga0209672_101656 | 3300025228 | Bacteria | 7261 |
| 89 | Ga0209563_100071 | 3300025230 | Bacteria | 232653 |
| 90 | Ga0207427_100019 | 3300025231 | Bacteria | 513977 |
| 91 | Ga0207427_100036 | 3300025231 | Bacteria | 309540 |
| 92 | Ga0207427_101627 | 3300025231 | Bacteria | 7605 |
| 93 | Ga0209437_100054 | 3300025233 | Bacteria | 366715 |
| 94 | Ga0209437_100126 | 3300025233 | Bacteria | 192521 |
| 95 | Ga0209437_100127 | 3300025233 | Bacteria | 190741 |
| 96 | Ga0209258_100017 | 3300025242 | Bacteria | 590785 |
| 97 | Ga0209258_100024 | 3300025242 | Bacteria | 542096 |
| 98 | Ga0209258_100035 | 3300025242 | Bacteria | 430864 |
| 99 | Ga0209258_100039 | 3300025242 | Bacteria | 386366 |
| 100 | Ga0209258_100256 | 3300025242 | Bacteria | 93548 |
| 101 | Ga0209258_100925 | 3300025242 | Bacteria | 14590 |
| 102 | Ga0209646_1000269 | 3300025246 | Bacteria | 48883 |
| 103 | Ga0209026_1000012 | 3300025250 | Bacteria | 480426 |
| 104 | Ga0209026_1000056 | 3300025250 | Bacteria | 236450 |
| 105 | Ga0209026_1002566 | 3300025250 | Bacteria | 6695 |
| 106 | Ga0209148_1000001 | 3300025254 | Bacteria | 2545271 |
| 107 | Ga0209148_1000002 | 3300025254 | Bacteria | 2399500 |
| 108 | Ga0209148_1000009 | 3300025254 | Bacteria | 1395625 |
| 109 | Ga0209148_1000045 | 3300025254 | Bacteria | 448076 |
| 110 | Ga0209148_1000048 | 3300025254 | Bacteria | 430913 |
| 111 | Ga0209148_1000084 | 3300025254 | Bacteria | 268147 |
| 112 | Ga0209148_1001593 | 3300025254 | Bacteria | 10678 |
| 113 | Ga0209759_1000317 | 3300025256 | Bacteria | 64752 |
| 114 | Ga0209759_1000404 | 3300025256 | Bacteria | 53269 |
| 115 | Ga0209759_1001201 | 3300025256 | Bacteria | 16115 |
| 116 | Ga0209759_1005072 | 3300025256 | Bacteria | 4716 |
| 117 | Ga0209759_1005363 | 3300025256 | Bacteria | 4513 |
| 118 | Ga0209129_1001230 | 3300025258 | Bacteria | 14682 |
| 119 | Ga0209233_1000002 | 3300025261 | Bacteria | 2501366 |
| 120 | Ga0209233_1000101 | 3300025261 | Bacteria | 286063 |
| 121 | Ga0209455_1000010 | 3300025272 | Bacteria | 959482 |
| 122 | Ga0209455_1000029 | 3300025272 | Bacteria | 542096 |
| 123 | Ga0209455_1000035 | 3300025272 | Bacteria | 479071 |
| 124 | Ga0209455_1000039 | 3300025272 | Bacteria | 437734 |
| 125 | Ga0209455_1000308 | 3300025272 | Bacteria | 49953 |
| 126 | Ga0209455_1004373 | 3300025272 | Bacteria | 4654 |
| 127 | Ga0209758_1004306 | 3300025297 | Bacteria | 11994 |
| 128 | Ga0209758_1010219 | 3300025297 | Bacteria | 5658 |
| 129 | Ga0207426_1004952 | 3300025302 | Bacteria | 6279 |
| 130 | Ga0207647_10000078 | 3300025904 | Bacteria | 73787 |
| 131 | Ga0207695_10000318 | 3300025913 | Bacteria | 116126 |
| 132 | Ga0207695_10000382 | 3300025913 | Bacteria | 100524 |
| 133 | Ga0207695_10008447 | 3300025913 | Bacteria | 12895 |
| 134 | Ga0207695_10012159 | 3300025913 | Bacteria | 10347 |
| 135 | Ga0207695_10013197 | 3300025913 | Bacteria | 9858 |
| 136 | Ga0207695_10131972 | 3300025913 | Bacteria | 2454 |
| 137 | Ga0207671_10000020 | 3300025914 | Bacteria | 309636 |
| 138 | Ga0207671_10000643 | 3300025914 | Bacteria | 45627 |
| 139 | Ga0207664_10001755 | 3300025929 | Bacteria | 14286 |
| 140 | Ga0207670_10005832 | 3300025936 | Bacteria | 6797 |
| 141 | Ga0207667_10000094 | 3300025949 | Bacteria | 145771 |
| 142 | Ga0207667_10011575 | 3300025949 | Bacteria | 10243 |
| 143 | Ga0207640_10001582 | 3300025981 | Bacteria | 12226 |
| 144 | Ga0207640_10040591 | 3300025981 | Bacteria | 2953 |
| 145 | Ga0207703_10067418 | 3300026035 | Bacteria | 2945 |
| 146 | Ga0207639_10055944 | 3300026041 | Bacteria | 3021 |
| 147 | Ga0207702_10000580 | 3300026078 | Bacteria | 40765 |
| 148 | Ga0207702_10001228 | 3300026078 | Bacteria | 25915 |
| 149 | Ga0207674_10011428 | 3300026116 | Bacteria | 9977 |
| 150 | Ga0207674_10040366 | 3300026116 | Bacteria | 4834 |
| 151 | Ga0207674_10085891 | 3300026116 | Bacteria | 3141 |
| 152 | Ga0265332_10009191 | 3300031238 | Bacteria | 4421 |
| 153 | Ga0395899_0000119 | 3300037312 | Bacteria | 127184 |
| 154 | Ga0395899_0001295 | 3300037312 | Bacteria | 21592 |
| 155 | Ga0395900_0001110 | 3300037418 | Bacteria | 34236 |
| 156 | Ga0395898_0000078 | 3300037466 | Bacteria | 244514 |
| 157 | Ga0395898_0000211 | 3300037466 | Bacteria | 149301 |
| 158 | Ga0395901_0020440 | 3300038443 | Bacteria | 6777 |
| 159 | Ga0466969_0001465 | 3300044656 | Bacteria | 12681 |
| 160 | Ga0466969_0008056 | 3300044656 | Bacteria | 5596 |
| 161 | Ga0466982_0000009 | 3300044672 | Bacteria | 221166 |
| 162 | Ga0466982_0065282 | 3300044672 | Bacteria | 2243 |
| 163 | Ga0466966_0006843 | 3300044684 | Bacteria | 7550 |
| 164 | Ga0466964_0000566 | 3300044706 | Bacteria | 11622 |
| 165 | Ga0466971_0003451 | 3300044719 | Bacteria | 6750 |
| 166 | Ga0466968_0012879 | 3300044735 | Bacteria | 3281 |
| 167 | Ga0466970_0000759 | 3300044765 | Bacteria | 15661 |
| 168 | Ga0466970_0012173 | 3300044765 | Bacteria | 4392 |
| 169 | Ga0466957_0001783 | 3300044842 | Bacteria | 11331 |
| 170 | Ga0466957_0055517 | 3300044842 | Bacteria | 2421 |
| 171 | Ga0466960_0010231 | 3300044901 | Bacteria | 3893 |
| 172 | Ga0466959_0000007 | 3300045049 | Bacteria | 184664 |
| 173 | Ga0466959_0028258 | 3300045049 | Bacteria | 4158 |
| 174 | Ga0466958_0058070 | 3300045836 | Bacteria | 2352 |
| 175 | Ga0466967_0201362 | 3300045976 | Bacteria | 1886 |
| 176 | Ga0495617_000243 | 3300046452 | Bacteria | 32367 |
| 177 | Ga0495617_002213 | 3300046452 | Bacteria | 7916 |
| 178 | Ga0495638_0000095 | 3300046460 | Bacteria | 141825 |
| 179 | Ga0495638_0000314 | 3300046460 | Bacteria | 62575 |
| 180 | Ga0495638_0000430 | 3300046460 | Bacteria | 50741 |
| 181 | Ga0495638_0013453 | 3300046460 | Bacteria | 5571 |
| 182 | Ga0495650_0000078 | 3300046471 | Bacteria | 245487 |
| 183 | Ga0495650_0002596 | 3300046471 | Bacteria | 14201 |
| 184 | Ga0495650_0018375 | 3300046471 | Bacteria | 3475 |
| 185 | Ga0495584_0013546 | 3300046491 | Bacteria | 4162 |
| 186 | Ga0495585_0000676 | 3300046492 | Bacteria | 31230 |
| 187 | Ga0495585_0003004 | 3300046492 | Bacteria | 11641 |
| 188 | Ga0495607_0000274 | 3300046501 | Bacteria | 55539 |
| 189 | Ga0495607_0000705 | 3300046501 | Bacteria | 32214 |
| 190 | Ga0495607_0005414 | 3300046501 | Bacteria | 9140 |
| 191 | Ga0495606_0001281 | 3300046507 | Bacteria | 34808 |
| 192 | Ga0495606_0004312 | 3300046507 | Bacteria | 14312 |
| 193 | Ga0495606_0004474 | 3300046507 | Bacteria | 13934 |
| 194 | Ga0495606_0006943 | 3300046507 | Bacteria | 10298 |
| 195 | Ga0495606_0027902 | 3300046507 | Bacteria | 3992 |
| 196 | Ga0495616_0000098 | 3300046513 | Bacteria | 74007 |
| 197 | Ga0495620_0000289 | 3300046515 | Bacteria | 36154 |
| 198 | Ga0495631_0000129 | 3300046518 | Bacteria | 50887 |
| 199 | Ga0495631_0000716 | 3300046518 | Bacteria | 21307 |
| 200 | Ga0495632_0000019 | 3300046519 | Bacteria | 215713 |
| 201 | Ga0495632_0016843 | 3300046519 | Bacteria | 4052 |
| 202 | Ga0495637_0005959 | 3300046520 | Bacteria | 6164 |
| 203 | Ga0495648_0002041 | 3300046524 | Bacteria | 19157 |
| 204 | Ga0495648_0007859 | 3300046524 | Bacteria | 8481 |
| 205 | Ga0495622_0005034 | 3300046557 | Bacteria | 6126 |
| 206 | Ga0495668_0003846 | 3300046616 | Bacteria | 10989 |
| 207 | Ga0495611_0000001 | 3300046648 | Bacteria | 2628469 |
| 208 | Ga0495611_0000092 | 3300046648 | Bacteria | 62897 |
| 209 | Ga0495625_0000037 | 3300046660 | Bacteria | 219383 |
| 210 | Ga0495625_0039965 | 3300046660 | Bacteria | 3424 |
| 211 | Ga0495661_0000793 | 3300046665 | Bacteria | 29963 |
| 212 | Ga0495670_0001704 | 3300046691 | Bacteria | 10807 |
| 213 | Ga0495670_0009119 | 3300046691 | Bacteria | 4878 |
| 214 | Ga0495671_0001295 | 3300046692 | Bacteria | 17073 |
| 215 | Ga0495589_0000523 | 3300046794 | Bacteria | 26993 |
| 216 | Ga0495660_0001179 | 3300046810 | Bacteria | 18430 |
| 217 | Ga0495679_000001 | 3300047446 | Bacteria | 1607568 |
| 218 | Ga0495673_0000010 | 3300047469 | Bacteria | 709599 |
| 219 | Ga0495673_0000741 | 3300047469 | Bacteria | 31140 |
| 220 | Ga0495686_0000123 | 3300047472 | Bacteria | 159841 |
| 221 | Ga0495686_0002411 | 3300047472 | Bacteria | 17731 |
| 222 | Ga0496100_0001839 | 3300048903 | Bacteria | 10602 |
| 223 | Ga0496100_0048441 | 3300048903 | Bacteria | 2743 |
| 224 | Ga0496101_0019271 | 3300048904 | Bacteria | 4655 |
| 225 | Ga0496104_0124199 | 3300048907 | Bacteria | 2478 |
| 226 | Ga0496105_0001915 | 3300048908 | Bacteria | 14951 |
| 227 | Ga0496106_0003587 | 3300048909 | Bacteria | 11567 |
| 228 | Ga0496113_0003708 | 3300048916 | Bacteria | 9209 |
| 229 | Ga0496115_0000025 | 3300048918 | Bacteria | 151658 |
| 230 | Ga0496115_0000543 | 3300048918 | Bacteria | 29378 |
| 231 | Ga0496115_0003256 | 3300048918 | Bacteria | 11656 |
| 232 | Ga0496117_0006318 | 3300048920 | Bacteria | 12055 |
| 233 | Ga0496117_0016082 | 3300048920 | Bacteria | 6332 |
| 234 | Ga0496118_0001059 | 3300048921 | Bacteria | 42966 |
| 235 | Ga0496118_0003180 | 3300048921 | Bacteria | 20973 |
| 236 | Ga0496118_0003485 | 3300048921 | Bacteria | 19735 |
| 237 | Ga0496119_0000058 | 3300048922 | Bacteria | 173131 |
| 238 | Ga0496120_0000469 | 3300048923 | Bacteria | 63212 |
| 239 | Ga0496120_0002242 | 3300048923 | Bacteria | 20201 |
| 240 | Ga0496121_0000401 | 3300048924 | Bacteria | 86663 |
| 241 | Ga0496121_0000541 | 3300048924 | Bacteria | 71839 |
| 242 | Ga0496121_0004351 | 3300048924 | Bacteria | 19147 |
| 243 | Ga0496121_0005150 | 3300048924 | Bacteria | 16990 |
| 244 | Ga0496121_0013308 | 3300048924 | Bacteria | 8856 |
| 245 | Ga0496121_0022237 | 3300048924 | Bacteria | 6167 |
| 246 | Ga0496122_0019220 | 3300048925 | Bacteria | 6252 |
| 247 | Ga0496123_0011128 | 3300048926 | Bacteria | 7844 |
| 248 | Ga0496123_0036051 | 3300048926 | Bacteria | 3514 |
| 249 | Ga0496123_0038630 | 3300048926 | Bacteria | 3352 |
| 250 | Ga0496124_0000635 | 3300048927 | Bacteria | 58069 |
| 251 | Ga0496124_0002254 | 3300048927 | Bacteria | 25621 |
| 252 | Ga0496125_0002023 | 3300048928 | Bacteria | 27465 |
| 253 | Ga0496126_0001166 | 3300048929 | Bacteria | 43310 |
| 254 | Ga0496126_0003201 | 3300048929 | Bacteria | 21009 |
| 255 | Ga0496126_0046032 | 3300048929 | Bacteria | 4006 |
| 256 | Ga0495678_000028 | 3300049459 | Bacteria | 220080 |
| 257 | Ga0495682_0002292 | 3300049460 | Bacteria | 9145 |
| 258 | Ga0501032_0030569 | 3300049569 | Bacteria | 3696 |
| 259 | Ga0501033_0000945 | 3300049570 | Bacteria | 26418 |
| 260 | Ga0501037_0005246 | 3300049573 | Bacteria | 9423 |
| 261 | Ga0501047_0004544 | 3300049581 | Bacteria | 13045 |
| 262 | Ga0501035_0012028 | 3300049822 | Bacteria | 8006 |
| 263 | Ga0501035_0013414 | 3300049822 | Bacteria | 7563 |
| 264 | Ga0501035_0037437 | 3300049822 | Bacteria | 4393 |
| 265 | Ga0501035_0082397 | 3300049822 | Bacteria | 2839 |
| 266 | Ga0501044_0016302 | 3300049823 | Bacteria | 7983 |
| 267 | Ga0500643_000152 | 3300053087 | Bacteria | 69800 |
| 268 | Ga0500555_000361 | 3300053103 | Bacteria | 19312 |
| 269 | Ga0500645_000866 | 3300053730 | Bacteria | 17631 |
| 270 | 2595448278 | 2593339238 | Bacteria | 4182970 |
| 271 | 2595451576 | 2593339239 | Bacteria | 4124669 |
| 272 | 2643895150 | 2643221577 | Bacteria | 3710843 |
| 273 | 2644477309 | 2643221685 | Bacteria | 3673288 |
| 274 | 2721028381 | 2718218334 | Bacteria | 4765486 |
| 275 | 2735836040 | 2734482264 | Unclassified | 5014763 |
| 276 | 2739227790 | 2738543009 | Bacteria | 4944499 |
| 277 | 2739731897 | 2739367700 | Bacteria | 4747630 |
| 278 | 2819563400 | 2818991440 | Bacteria | 4774720 |
| 279 | 2842915234 | 2842914999 | Bacteria | 4419378 |
| 280 | 2884339832 | 2884338543 | Bacteria | 4610696 |
| 281 | 2884413389 | 2884411467 | Bacteria | 5246714 |
| 282 | 2895397726 | 2895395659 | Bacteria | 3983269 |
| 283 | 2904464291 | 2904463128 | Bacteria | 4775606 |
| 284 | 2919088509 | 2919085039 | Bacteria | 4532964 |
| 285 | 2919404656 | 2919404418 | Bacteria | 4232372 |
| 286 | 2928964593 | 2928963466 | Bacteria | 5165703 |
| 287 | 2941472472 | 2941471342 | Bacteria | 5018624 |
| 288 | Ga0501047_0011477 | |||
| 289 | JGI24737J22298_10005481 | |||
| 290 | JGI25156J39149_1003334 | |||
| 291 | JGI25162J39368_1000028 | |||
| 292 | JGI25162J39368_1000236 | |||
| 293 | JGI25162J39368_1000484 | |||
| 294 | JGI25157J39369_1000068 | |||
| 295 | JGI25157J39369_1000126 | |||
| 296 | JGI25157J39369_1000266 | |||
| 297 | JGI25157J39369_1001887 | |||
| 298 | JGI25157J39369_1002765 | |||
| 299 | JGI25163J39215_1000096 | |||
| 300 | JGI25164J39214_1000012 | |||
| 301 | JGI25164J39214_1000113 | |||
| 302 | JGI25165J46597_1000048 | |||
| 303 | JGI25165J46597_1000158 | |||
| 304 | rootH2_10006739 | |||
| 305 | Ga0006562J51391_1040015 | |||
| 306 | Ga0055538_1000601 | |||
| 307 | Ga0055539_1001682 | |||
| 308 | Ga0055533_1000275 | |||
| 309 | Ga0055525_1000239 | |||
| 310 | Ga0055527_1000066 | |||
| 311 | Ga0055527_1000136 | |||
| 312 | Ga0055527_1002177 | |||
| 313 | Ga0055535_1000027 | |||
| 314 | Ga0055535_1000058 | |||
| 315 | Ga0055535_1000149 | |||
| 316 | Ga0055535_1000151 | |||
| 317 | Ga0055535_1000427 | |||
| 318 | Ga0055535_1000990 | |||
| 319 | Ga0055542_1000034 | |||
| 320 | Ga0055542_1000067 | |||
| 321 | Ga0055542_1000085 | |||
| 322 | Ga0055542_1000134 | |||
| 323 | Ga0055542_1000315 | |||
| 324 | Ga0055542_1000503 | |||
| 325 | Ga0055529_1000056 | |||
| 326 | Ga0055529_1000173 | |||
| 327 | Ga0055529_1000240 | |||
| 328 | Ga0055529_1002254 | |||
| 329 | Ga0065165_1000186 | |||
| 330 | Ga0070682_100018577 | |||
| 331 | Ga0070689_100016504 | |||
| 332 | Ga0070714_100000245 | |||
| 333 | Ga0070685_10005616 | |||
| 334 | Ga0068853_100033125 | |||
| 335 | Ga0068855_100005665 | |||
| 336 | Ga0068855_100013113 | |||
| 337 | Ga0068857_100047885 | |||
| 338 | Ga0068854_100002097 | |||
| 339 | Ga0068856_100000562 | |||
| 340 | Ga0068856_100025615 | |||
| 341 | Ga0068858_100072134 | |||
| 342 | Ga0105240_10002111 | |||
| 343 | Ga0105240_10002149 | |||
| 344 | Ga0105240_10013684 | |||
| 345 | Ga0105240_10016107 | |||
| 346 | Ga0105240_10088387 | |||
| 347 | Ga0105240_10229582 | |||
| 348 | Ga0105237_10000183 | |||
| 349 | Ga0105237_10010121 | |||
| 350 | Ga0105238_10031616 | |||
| 351 | Ga0105239_10000020 | |||
| 352 | Ga0157314_1000311 | |||
| 353 | Ga0157373_10003397 | |||
| 354 | Ga0157371_10005085 | |||
| 355 | Ga0157371_10010920 | |||
| 356 | Ga0157370_10000044 | |||
| 357 | Ga0157370_10006373 | |||
| 358 | Ga0157369_10001035 | |||
| 359 | Ga0157372_10007437 | |||
| 360 | Ga0182008_10019669 | |||
| 361 | Ga0157376_10126819 | |||
| 362 | Ga0182006_1001006 | |||
| 363 | Ga0182006_1014570 | |||
| 364 | Ga0182005_1000205 | |||
| 365 | Ga0183368_1003 | |||
| 366 | Ga0163161_10002184 | |||
| 367 | Ga0163161_10060616 | |||
| 368 | Ga0209784_100016 | |||
| 369 | Ga0209566_102569 | |||
| 370 | Ga0209674_100012 | |||
| 371 | Ga0209672_100007 | |||
| 372 | Ga0209672_100018 | |||
| 373 | Ga0209672_100161 | |||
| 374 | Ga0209672_101141 | |||
| 375 | Ga0209672_101656 | |||
| 376 | Ga0209563_100071 | |||
| 377 | Ga0207427_100019 | |||
| 378 | Ga0207427_100036 | |||
| 379 | Ga0207427_101627 | |||
| 380 | Ga0209437_100054 | |||
| 381 | Ga0209437_100126 | |||
| 382 | Ga0209437_100127 | |||
| 383 | Ga0209258_100017 | |||
| 384 | Ga0209258_100024 | |||
| 385 | Ga0209258_100035 | |||
| 386 | Ga0209258_100039 | |||
| 387 | Ga0209258_100256 | |||
| 388 | Ga0209258_100925 | |||
| 389 | Ga0209646_1000269 | |||
| 390 | Ga0209026_1000012 | |||
| 391 | Ga0209026_1000056 | |||
| 392 | Ga0209026_1002566 | |||
| 393 | Ga0209148_1000001 | |||
| 394 | Ga0209148_1000002 | |||
| 395 | Ga0209148_1000009 | |||
| 396 | Ga0209148_1000045 | |||
| 397 | Ga0209148_1000048 | |||
| 398 | Ga0209148_1000084 | |||
| 399 | Ga0209148_1001593 | |||
| 400 | Ga0209759_1000317 | |||
| 401 | Ga0209759_1000404 | |||
| 402 | Ga0209759_1001201 | |||
| 403 | Ga0209759_1005072 | |||
| 404 | Ga0209759_1005363 | |||
| 405 | Ga0209129_1001230 | |||
| 406 | Ga0209233_1000002 | |||
| 407 | Ga0209233_1000101 | |||
| 408 | Ga0209455_1000010 | |||
| 409 | Ga0209455_1000029 | |||
| 410 | Ga0209455_1000035 | |||
| 411 | Ga0209455_1000039 | |||
| 412 | Ga0209455_1000308 | |||
| 413 | Ga0209455_1004373 | |||
| 414 | Ga0209758_1004306 | |||
| 415 | Ga0209758_1010219 | |||
| 416 | Ga0207426_1004952 | |||
| 417 | Ga0207647_10000078 | |||
| 418 | Ga0207695_10000318 | |||
| 419 | Ga0207695_10000382 | |||
| 420 | Ga0207695_10008447 | |||
| 421 | Ga0207695_10012159 | |||
| 422 | Ga0207695_10013197 | |||
| 423 | Ga0207695_10131972 | |||
| 424 | Ga0207671_10000020 | |||
| 425 | Ga0207671_10000643 | |||
| 426 | Ga0207664_10001755 | |||
| 427 | Ga0207670_10005832 | |||
| 428 | Ga0207667_10000094 | |||
| 429 | Ga0207667_10011575 | |||
| 430 | Ga0207640_10001582 | |||
| 431 | Ga0207640_10040591 | |||
| 432 | Ga0207703_10067418 | |||
| 433 | Ga0207639_10055944 | |||
| 434 | Ga0207702_10000580 | |||
| 435 | Ga0207702_10001228 | |||
| 436 | Ga0207674_10011428 | |||
| 437 | Ga0207674_10040366 | |||
| 438 | Ga0207674_10085891 | |||
| 439 | Ga0265332_10009191 | |||
| 440 | Ga0395899_0000119 | |||
| 441 | Ga0395899_0001295 | |||
| 442 | Ga0395900_0001110 | |||
| 443 | Ga0395898_0000078 | |||
| 444 | Ga0395898_0000211 | |||
| 445 | Ga0395901_0020440 | |||
| 446 | Ga0466969_0001465 | |||
| 447 | Ga0466969_0008056 | |||
| 448 | Ga0466982_0000009 | |||
| 449 | Ga0466982_0065282 | |||
| 450 | Ga0466966_0006843 | |||
| 451 | Ga0466964_0000566 | |||
| 452 | Ga0466971_0003451 | |||
| 453 | Ga0466968_0012879 | |||
| 454 | Ga0466970_0000759 | |||
| 455 | Ga0466970_0012173 | |||
| 456 | Ga0466957_0001783 | |||
| 457 | Ga0466957_0055517 | |||
| 458 | Ga0466960_0010231 | |||
| 459 | Ga0466959_0000007 | |||
| 460 | Ga0466959_0028258 | |||
| 461 | Ga0466958_0058070 | |||
| 462 | Ga0466967_0201362 | |||
| 463 | Ga0495617_000243 | |||
| 464 | Ga0495617_002213 | |||
| 465 | Ga0495638_0000095 | |||
| 466 | Ga0495638_0000314 | |||
| 467 | Ga0495638_0000430 | |||
| 468 | Ga0495638_0013453 | |||
| 469 | Ga0495650_0000078 | |||
| 470 | Ga0495650_0002596 | |||
| 471 | Ga0495650_0018375 | |||
| 472 | Ga0495584_0013546 | |||
| 473 | Ga0495585_0000676 | |||
| 474 | Ga0495585_0003004 | |||
| 475 | Ga0495607_0000274 | |||
| 476 | Ga0495607_0000705 | |||
| 477 | Ga0495607_0005414 | |||
| 478 | Ga0495606_0001281 | |||
| 479 | Ga0495606_0004312 | |||
| 480 | Ga0495606_0004474 | |||
| 481 | Ga0495606_0006943 | |||
| 482 | Ga0495606_0027902 | |||
| 483 | Ga0495616_0000098 | |||
| 484 | Ga0495620_0000289 | |||
| 485 | Ga0495631_0000129 | |||
| 486 | Ga0495631_0000716 | |||
| 487 | Ga0495632_0000019 | |||
| 488 | Ga0495632_0016843 | |||
| 489 | Ga0495637_0005959 | |||
| 490 | Ga0495648_0002041 | |||
| 491 | Ga0495648_0007859 | |||
| 492 | Ga0495622_0005034 | |||
| 493 | Ga0495668_0003846 | |||
| 494 | Ga0495611_0000001 | |||
| 495 | Ga0495611_0000092 | |||
| 496 | Ga0495625_0000037 | |||
| 497 | Ga0495625_0039965 | |||
| 498 | Ga0495661_0000793 | |||
| 499 | Ga0495670_0001704 | |||
| 500 | Ga0495670_0009119 | |||
| 501 | Ga0495671_0001295 | |||
| 502 | Ga0495589_0000523 | |||
| 503 | Ga0495660_0001179 | |||
| 504 | Ga0495679_000001 | |||
| 505 | Ga0495673_0000010 | |||
| 506 | Ga0495673_0000741 | |||
| 507 | Ga0495686_0000123 | |||
| 508 | Ga0495686_0002411 | |||
| 509 | Ga0496100_0001839 | |||
| 510 | Ga0496100_0048441 | |||
| 511 | Ga0496101_0019271 | |||
| 512 | Ga0496104_0124199 | |||
| 513 | Ga0496105_0001915 | |||
| 514 | Ga0496106_0003587 | |||
| 515 | Ga0496113_0003708 | |||
| 516 | Ga0496115_0000025 | |||
| 517 | Ga0496115_0000543 | |||
| 518 | Ga0496115_0003256 | |||
| 519 | Ga0496117_0006318 | |||
| 520 | Ga0496117_0016082 | |||
| 521 | Ga0496118_0001059 | |||
| 522 | Ga0496118_0003180 | |||
| 523 | Ga0496118_0003485 | |||
| 524 | Ga0496119_0000058 | |||
| 525 | Ga0496120_0000469 | |||
| 526 | Ga0496120_0002242 | |||
| 527 | Ga0496121_0000401 | |||
| 528 | Ga0496121_0000541 | |||
| 529 | Ga0496121_0004351 | |||
| 530 | Ga0496121_0005150 | |||
| 531 | Ga0496121_0013308 | |||
| 532 | Ga0496121_0022237 | |||
| 533 | Ga0496122_0019220 | |||
| 534 | Ga0496123_0011128 | |||
| 535 | Ga0496123_0036051 | |||
| 536 | Ga0496123_0038630 | |||
| 537 | Ga0496124_0000635 | |||
| 538 | Ga0496124_0002254 | |||
| 539 | Ga0496125_0002023 | |||
| 540 | Ga0496126_0001166 | |||
| 541 | Ga0496126_0003201 | |||
| 542 | Ga0496126_0046032 | |||
| 543 | Ga0495678_000028 | |||
| 544 | Ga0495682_0002292 | |||
| 545 | Ga0501032_0030569 | |||
| 546 | Ga0501033_0000945 | |||
| 547 | Ga0501037_0005246 | |||
| 548 | Ga0501047_0004544 | |||
| 549 | Ga0501035_0012028 | |||
| 550 | Ga0501035_0013414 | |||
| 551 | Ga0501035_0037437 | |||
| 552 | Ga0501035_0082397 | |||
| 553 | Ga0501044_0016302 | |||
| 554 | Ga0500643_000152 | |||
| 555 | Ga0500555_000361 | |||
| 556 | Ga0500645_000866 | |||
| 557 | 2595448278 | |||
| 558 | 2595451576 | |||
| 559 | 2643895150 | |||
| 560 | 2644477309 | |||
| 561 | 2721028381 | |||
| 562 | 2735836040 | |||
| 563 | 2739227790 | |||
| 564 | 2739731897 | |||
| 565 | 2819563400 | |||
| 566 | 2842915234 | |||
| 567 | 2884339832 | |||
| 568 | 2884413389 | |||
| 569 | 2895397726 | |||
| 570 | 2904464291 | |||
| 571 | 2919088509 | |||
| 572 | 2919404656 | |||
| 573 | 2928964593 | |||
| 574 | 2941472472 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 8b1t-assembly1.cif.gz_D | recbcd-dna in complex with the phage protein abc2 | 0.86 | 7 | 629 |
| 6t2v-assembly1.cif.gz_D | cryo-em structure of the recbcd in complex with chi-plus2 substrate | 0.8539 | 15 | 629 |
| 8b1t-assembly1.cif.gz_D | recbcd-dna in complex with the phage protein abc2 | 0.8533 | 7 | 629 |
| 5mbv-assembly1.cif.gz_D | cryo-em structure of lambda phage protein gams bound to recbcd. | 0.8502 | 7 | 629 |
| 6t2v-assembly1.cif.gz_D | cryo-em structure of the recbcd in complex with chi-plus2 substrate | 0.8472 | 15 | 629 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P04993_474_593_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9508 | 487 | 617 | 3.40.50.300 |
| af_P04993_474_593_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9354 | 487 | 617 | 3.40.50.300 |
| af_P9WHJ1_441_558_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9203 | 489 | 617 | 3.40.50.300 |
| 5mbvD02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9183 | 114 | 361 | 3.40.50.300 |
| 5mbvD02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9077 | 114 | 361 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2P5THV8-F1-model_v4 | Exodeoxyribonuclease V subunit alpha | 0.951 | 417 | 629 |
|
| AF-A0A831NX68-F1-model_v4 | Exodeoxyribonuclease V subunit alpha | 0.9483 | 525 | 631 |
|
| AF-A0A0B8QWH4-F1-model_v4 | Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) | 0.9397 | 436 | 632 |
GO:0008854
|
| AF-A0A831NX68-F1-model_v4 | Exodeoxyribonuclease V subunit alpha | 0.9393 | 525 | 631 |
|
| AF-N6YUE6-F1-model_v4 | Exodeoxyribonuclease V subunit alpha | 0.9386 | 423 | 625 |
GO:0003677
GO:0004386 GO:0005524 GO:0016853 |