F388255

General Info

Members Datasets Scaffolds Average Seq Length
287 178 574 416

Family's Representative Sequence

Representative Sequence 3300049742|Ga0501080_0173477|Ga0501080_0173477_436_1773
Length 422
Sequence MDLRLTRTREKEVIEVAGRELAISHPAKVLFPQANYTKLDLVRYYLAVAEGALRGAGGRPNMLVRYPDGIAGEHFYQKRAPSSRPDWIEVVELRFPSGRVAAEVVPRDAAALAWLANLGCLELHPHPVRAEDLEHPDELRVDLDPVPGVEWGQLQEVSRVARTVLEDFDLVGWPKTSGSRGMHICVRLEGHRWSFDEVRRAALALAREVERRAPKLATSKWWKEERHGVFVDYNQNAKDRTVASAYSVRPTPAARVSAPLRWDEIEACDPADFTLASMPARFEKLGDRHAGIDQHAGSIAGLLELFERQGLGDAPWPPHYRKQASEPPRVQPSRQRTATRRYPLIEIGRARRKEDALAGLERWKRRHPQTAACLEPADVLVDAMRGRYSTWTRIRINLQHVPEKLRPAQEPLDPDEKILSSS

Samples

Sample ID Description Type Environment
1 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
36 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
48 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
49 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
50 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
54 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
55 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
56 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
57 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
59 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
60 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
61 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
62 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
63 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
64 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
65 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
66 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
71 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
72 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
73 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
74 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
75 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
76 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
77 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
78 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
79 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
80 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
81 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
82 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
83 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
84 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
85 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
86 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
87 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
88 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
89 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
90 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
92 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
125 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
129 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
130 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
131 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
132 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
133 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
134 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
137 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
138 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
142 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
143 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
156 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
157 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
158 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
159 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
160 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
161 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
162 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
163 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
164 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
165 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
166 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
167 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
170 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
171 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
172 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
173 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
174 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
175 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
176 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
178 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.39
Nodule 0
Rhizoplane 2.09
Rhizosphere 92.68
Stem 0
Stem Tuber 0
Unclassified 0.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501080_0173477 3300049742 Bacteria 1988
2 JGI25156J39149_1000113 3300002705 Bacteria 58389
3 JGI25154J39366_1001135 3300002738 Bacteria 10333
4 JGI25157J39369_1000080 3300002741 Bacteria 85963
5 Ga0055539_1001732 3300003752 Bacteria 3808
6 Ga0065712_10071166 3300005290 Bacteria 5405
7 Ga0065715_10089362 3300005293 Bacteria 10880
8 Ga0070670_100006471 3300005331 Bacteria 9913
9 Ga0070670_100032037 3300005331 Bacteria 4526
10 Ga0068869_100003319 3300005334 Bacteria 9831
11 Ga0068869_100012875 3300005334 Bacteria 5539
12 Ga0068869_100017093 3300005334 Bacteria 4909
13 Ga0068868_100024978 3300005338 Bacteria 4539
14 Ga0068868_100117958 3300005338 Bacteria 2162
15 Ga0070689_100004480 3300005340 Bacteria 9447
16 Ga0070687_100021370 3300005343 Bacteria 3041
17 Ga0070661_100022073 3300005344 Bacteria 4554
18 Ga0070661_100049471 3300005344 Unclassified 3077
19 Ga0070668_100067272 3300005347 Bacteria 2783
20 Ga0070669_100006087 3300005353 Bacteria 8705
21 Ga0070669_100021570 3300005353 Bacteria 4602
22 Ga0070675_100001578 3300005354 Bacteria 16821
23 Ga0070675_100063112 3300005354 Bacteria 3062
24 Ga0070675_100091944 3300005354 Bacteria 2543
25 Ga0070671_100129033 3300005355 Bacteria 2129
26 Ga0070674_100020241 3300005356 Bacteria 4245
27 Ga0070674_100257477 3300005356 Bacteria 1373
28 Ga0070673_100007852 3300005364 Bacteria 7067
29 Ga0070688_100001300 3300005365 Bacteria 12444
30 Ga0070667_100013736 3300005367 Bacteria 6694
31 Ga0070667_100032075 3300005367 Bacteria 4381
32 Ga0070667_100104768 3300005367 Bacteria 2447
33 Ga0070709_10004029 3300005434 Bacteria 7925
34 Ga0070709_10205231 3300005434 Bacteria 1398
35 Ga0070705_100004590 3300005440 Bacteria 6722
36 Ga0070700_100017768 3300005441 Bacteria 4074
37 Ga0070694_100010518 3300005444 Bacteria 5711
38 Ga0070694_100023697 3300005444 Bacteria 3952
39 Ga0070694_100032475 3300005444 Bacteria 3428
40 Ga0070708_100018115 3300005445 Bacteria 5892
41 Ga0070678_100009897 3300005456 Bacteria 5795
42 Ga0070678_100049220 3300005456 Bacteria 3040
43 Ga0070662_100071765 3300005457 Bacteria 2554
44 Ga0070662_100177719 3300005457 Bacteria 1676
45 Ga0070685_10017567 3300005466 Bacteria 3831
46 Ga0070706_100040441 3300005467 Bacteria 4304
47 Ga0070706_100059422 3300005467 Bacteria 3528
48 Ga0070707_100002573 3300005468 Bacteria 17236
49 Ga0070707_100080069 3300005468 Bacteria 3153
50 Ga0070707_100233310 3300005468 Bacteria 1791
51 Ga0070699_100004910 3300005518 Bacteria 11793
52 Ga0070697_100044307 3300005536 Bacteria 3603
53 Ga0070672_100079591 3300005543 Bacteria 2623
54 Ga0070686_100001043 3300005544 Bacteria 15947
55 Ga0070695_100003429 3300005545 Bacteria 9262
56 Ga0070696_100017043 3300005546 Bacteria 4900
57 Ga0070696_100108378 3300005546 Bacteria 1998
58 Ga0070665_100013284 3300005548 Bacteria 8291
59 Ga0070665_100126852 3300005548 Bacteria 2554
60 Ga0068855_100002224 3300005563 Bacteria 24004
61 Ga0068855_100074271 3300005563 Bacteria 3949
62 Ga0070664_100001437 3300005564 Bacteria 18984
63 Ga0070664_100006334 3300005564 Bacteria 9547
64 Ga0068857_100001231 3300005577 Bacteria 19970
65 Ga0068857_100072923 3300005577 Bacteria 3059
66 Ga0068857_100098566 3300005577 Bacteria 2621
67 Ga0068854_100000535 3300005578 Bacteria 23008
68 Ga0068856_100000304 3300005614 Bacteria 53918
69 Ga0070702_100002805 3300005615 Bacteria 7634
70 Ga0068852_100000309 3300005616 Bacteria 32921
71 Ga0068859_100001480 3300005617 Bacteria 23884
72 Ga0068859_100002870 3300005617 Bacteria 17489
73 Ga0068864_100001875 3300005618 Bacteria 17265
74 Ga0068864_100055651 3300005618 Bacteria 3416
75 Ga0068861_100000360 3300005719 Bacteria 26064
76 Ga0068861_100102492 3300005719 Bacteria 2279
77 Ga0068851_10000622 3300005834 Bacteria 15176
78 Ga0068870_10011835 3300005840 Bacteria 4058
79 Ga0068863_100004515 3300005841 Bacteria 13729
80 Ga0068863_100008225 3300005841 Bacteria 10192
81 Ga0068863_100047535 3300005841 Bacteria 4069
82 Ga0068858_100008535 3300005842 Bacteria 9843
83 Ga0068858_100084452 3300005842 Bacteria 2953
84 Ga0068860_100043389 3300005843 Bacteria 4291
85 Ga0068860_100054631 3300005843 Bacteria 3796
86 Ga0068860_100113451 3300005843 Bacteria 2591
87 Ga0068862_100001168 3300005844 Bacteria 24743
88 Ga0081455_10000148 3300005937 Bacteria 83828
89 Ga0081539_10000001 3300005985 Bacteria 808331
90 Ga0097621_100139257 3300006237 Bacteria 2072
91 Ga0075370_10066722 3300006353 Bacteria 2053
92 Ga0075428_100000296 3300006844 Bacteria 48650
93 Ga0075430_100000061 3300006846 Bacteria 58211
94 Ga0075431_100000006 3300006847 Bacteria 102881
95 Ga0075431_100005172 3300006847 Bacteria 12846
96 Ga0075431_100011702 3300006847 Bacteria 8851
97 Ga0075431_100029595 3300006847 Bacteria 5639
98 Ga0075431_100035945 3300006847 Bacteria 5102
99 Ga0075433_10019932 3300006852 Bacteria 5600
100 Ga0075433_10160120 3300006852 Bacteria 2003
101 Ga0075429_100004201 3300006880 Bacteria 12335
102 Ga0068865_100005500 3300006881 Bacteria 7688
103 Ga0068865_100024869 3300006881 Bacteria 3933
104 Ga0075436_100000152 3300006914 Bacteria 42960
105 Ga0075436_100099193 3300006914 Bacteria 2027
106 Ga0097620_100001479 3300006931 Bacteria 23884
107 Ga0097620_100002870 3300006931 Bacteria 17489
108 Ga0075435_100038477 3300007076 Bacteria 3813
109 Ga0105240_10055049 3300009093 Bacteria 4982
110 Ga0111539_10001482 3300009094 Bacteria 31357
111 Ga0111539_10009513 3300009094 Bacteria 12268
112 Ga0111539_10011066 3300009094 Bacteria 11350
113 Ga0111539_10059400 3300009094 Bacteria 4535
114 Ga0111539_10068292 3300009094 Bacteria 4196
115 Ga0105245_10007891 3300009098 Bacteria 9310
116 Ga0105247_10000225 3300009101 Bacteria 54076
117 Ga0114129_10001123 3300009147 Bacteria 35345
118 Ga0114129_10017206 3300009147 Bacteria 10297
119 Ga0114129_10062478 3300009147 Bacteria 5202
120 Ga0105241_10010261 3300009174 Bacteria 6878
121 Ga0105241_10019503 3300009174 Bacteria 5001
122 Ga0105248_10004412 3300009177 Bacteria 15572
123 Ga0105248_10068507 3300009177 Bacteria 3984
124 Ga0105248_10278015 3300009177 Bacteria 1885
125 Ga0105237_10143529 3300009545 Bacteria 2382
126 Ga0105237_10226552 3300009545 Bacteria 1870
127 Ga0105238_10008718 3300009551 Bacteria 10145
128 Ga0105238_10098141 3300009551 Bacteria 2914
129 Ga0105249_10004622 3300009553 Bacteria 11893
130 Ga0105249_10148154 3300009553 Bacteria 2257
131 Ga0105239_10021749 3300010375 Bacteria 7071
132 Ga0157378_10002443 3300013297 Bacteria 16531
133 Ga0163162_10007316 3300013306 Bacteria 10730
134 Ga0163162_10032633 3300013306 Bacteria 5172
135 Ga0163162_10346788 3300013306 Bacteria 1617
136 Ga0157372_10121822 3300013307 Bacteria 2997
137 Ga0157375_10095325 3300013308 Bacteria 3046
138 Ga0157375_10289742 3300013308 Bacteria 1800
139 Ga0163163_10001284 3300014325 Bacteria 21212
140 Ga0163163_10106225 3300014325 Bacteria 2834
141 Ga0157380_10060303 3300014326 Bacteria 3031
142 Ga0157380_10069284 3300014326 Bacteria 2846
143 Ga0157379_10015232 3300014968 Bacteria 6743
144 Ga0163161_10019603 3300017792 Bacteria 4745
145 Ga0213874_10001084 3300021377 Bacteria 5578
146 Ga0209646_1000129 3300025246 Bacteria 129401
147 Ga0209026_1000059 3300025250 Bacteria 226652
148 Ga0209677_100126 3300025253 Bacteria 78655
149 Ga0209759_1000081 3300025256 Bacteria 169943
150 Ga0207656_10005621 3300025321 Bacteria 4447
151 Ga0207710_10001772 3300025900 Bacteria 10422
152 Ga0207688_10019997 3300025901 Bacteria 3652
153 Ga0207643_10050102 3300025908 Bacteria 2367
154 Ga0207684_10036800 3300025910 Bacteria 4154
155 Ga0207695_10087881 3300025913 Bacteria 3130
156 Ga0207662_10008275 3300025918 Bacteria 5693
157 Ga0207646_10012070 3300025922 Bacteria 8318
158 Ga0207646_10031597 3300025922 Bacteria 4794
159 Ga0207646_10114051 3300025922 Bacteria 2426
160 Ga0207694_10107510 3300025924 Bacteria 2216
161 Ga0207650_10061840 3300025925 Bacteria 2796
162 Ga0207659_10002185 3300025926 Bacteria 11621
163 Ga0207659_10054003 3300025926 Bacteria 2868
164 Ga0207664_10120061 3300025929 Bacteria 2198
165 Ga0207644_10018589 3300025931 Bacteria 4705
166 Ga0207706_10001931 3300025933 Bacteria 20360
167 Ga0207706_10043499 3300025933 Bacteria 3979
168 Ga0207669_10001719 3300025937 Bacteria 9286
169 Ga0207691_10036018 3300025940 Bacteria 4586
170 Ga0207691_10103600 3300025940 Bacteria 2537
171 Ga0207711_10082724 3300025941 Bacteria 2807
172 Ga0207689_10096766 3300025942 Bacteria 2424
173 Ga0207679_10025958 3300025945 Bacteria 4035
174 Ga0207679_10026512 3300025945 Bacteria 3996
175 Ga0207712_10017589 3300025961 Bacteria 4646
176 Ga0207712_10062936 3300025961 Bacteria 2639
177 Ga0207658_10128932 3300025986 Bacteria 2029
178 Ga0207677_10271592 3300026023 Bacteria 1387
179 Ga0207703_10072880 3300026035 Bacteria 2840
180 Ga0207708_10004973 3300026075 Bacteria 9791
181 Ga0207708_10020909 3300026075 Bacteria 4938
182 Ga0207702_10001084 3300026078 Bacteria 27885
183 Ga0207702_10099777 3300026078 Bacteria 2560
184 Ga0207641_10006520 3300026088 Bacteria 9818
185 Ga0207641_10026725 3300026088 Bacteria 4764
186 Ga0207648_10006049 3300026089 Bacteria 12069
187 Ga0207676_10001615 3300026095 Bacteria 16603
188 Ga0207676_10003705 3300026095 Bacteria 10805
189 Ga0207676_10186005 3300026095 Bacteria 1823
190 Ga0207674_10000478 3300026116 Bacteria 52698
191 Ga0207674_10009731 3300026116 Bacteria 10954
192 Ga0207674_10067711 3300026116 Bacteria 3594
193 Ga0207675_100000887 3300026118 Bacteria 29867
194 Ga0207675_100026562 3300026118 Bacteria 5390
195 Ga0207683_10008960 3300026121 Bacteria 8523
196 Ga0207698_10001524 3300026142 Bacteria 13496
197 Ga0207428_10004151 3300027907 Bacteria 13881
198 Ga0207428_10005319 3300027907 Bacteria 12002
199 Ga0207428_10117527 3300027907 Bacteria 2041
200 Ga0268266_10011371 3300028379 Bacteria 7741
201 Ga0268266_10094739 3300028379 Bacteria 2621
202 Ga0268265_10030775 3300028380 Bacteria 3869
203 Ga0268264_10026292 3300028381 Bacteria 4755
204 Ga0307405_10011969 3300031731 Bacteria 4570
205 Ga0307406_10002072 3300031901 Bacteria 10948
206 Ga0307412_10021008 3300031911 Bacteria 3982
207 Ga0307409_100027527 3300031995 Bacteria 4030
208 Ga0307416_100087343 3300032002 Bacteria 2662
209 Ga0436363_0214036 3300039450 Bacteria 21593
210 Ga0436363_0482088 3300039450 Bacteria 3531
211 Ga0451577_0409731 3300042876 Bacteria 1230
212 Ga0451576_0001930 3300045051 Bacteria 33143
213 Ga0451576_0072947 3300045051 Bacteria 3572
214 Ga0451576_0076490 3300045051 Bacteria 3483
215 Ga0466967_0002464 3300045976 Bacteria 11527
216 Ga0495658_0144557 3300046683 Bacteria 1457
217 Ga0495669_0008214 3300046684 Bacteria 4382
218 Ga0496102_0040051 3300048905 Bacteria 4237
219 Ga0496104_0024671 3300048907 Bacteria 5533
220 Ga0496108_0068908 3300048911 Bacteria 2985
221 Ga0496109_0049122 3300048912 Bacteria 3840
222 Ga0496110_0072587 3300048913 Bacteria 3054
223 Ga0496110_0164890 3300048913 Bacteria 2009
224 Ga0496121_0002416 3300048924 Bacteria 28627
225 Ga0496125_0038657 3300048928 Bacteria 4126
226 Ga0501034_0115736 3300049571 Bacteria 2670
227 Ga0501036_0081354 3300049572 Bacteria 2737
228 Ga0501038_0012710 3300049574 Bacteria 7693
229 Ga0501038_0062698 3300049574 Bacteria 3176
230 Ga0501039_0010400 3300049575 Bacteria 7091
231 Ga0501039_0047179 3300049575 Bacteria 3329
232 Ga0501040_0006293 3300049576 Bacteria 7707
233 Ga0501041_0000885 3300049577 Bacteria 16198
234 Ga0501041_0109647 3300049577 Bacteria 1712
235 Ga0501042_0141234 3300049578 Bacteria 1736
236 Ga0501043_0115496 3300049579 Bacteria 2107
237 Ga0501046_0011709 3300049580 Bacteria 7492
238 Ga0501046_0044696 3300049580 Bacteria 3522
239 Ga0501068_0038739 3300049584 Bacteria 2856
240 Ga0501072_0043366 3300049588 Bacteria 3535
241 Ga0501072_0121993 3300049588 Bacteria 2076
242 Ga0501074_0011780 3300049590 Bacteria 6357
243 Ga0501074_0039608 3300049590 Bacteria 3413
244 Ga0501075_0013074 3300049591 Bacteria 5916
245 Ga0501076_0075579 3300049592 Bacteria 2700
246 Ga0501077_0010068 3300049593 Bacteria 5886
247 Ga0501079_0002420 3300049741 Bacteria 13540
248 Ga0501079_0062569 3300049741 Bacteria 2870
249 Ga0501080_0038526 3300049742 Bacteria 4462
250 Ga0501080_0111186 3300049742 Bacteria 2539
251 Ga0501081_0000963 3300049743 Bacteria 17110
252 Ga0501081_0013392 3300049743 Bacteria 5394
253 Ga0501045_0001596 3300049824 Bacteria 15141
254 Ga0501045_0028853 3300049824 Bacteria 4005
255 nmdc:mga05p37_723_c1 3300050507 Bacteria 36579
256 nmdc:mga09592_1353_c1 3300050508 Bacteria 11733
257 nmdc:mga09592_41224_c1 3300050508 Bacteria 3882
258 nmdc:mga09592_65002_c1 3300050508 Bacteria 3089
259 nmdc:mga0qj67_12140_c1 3300050509 Bacteria 6479
260 nmdc:mga0qj67_17992_c1 3300050509 Bacteria 5381
261 nmdc:mga0qj67_85_c1 3300050509 Bacteria 63210
262 nmdc:mga06r32_14528_c1 3300050510 Bacteria 7146
263 nmdc:mga06r32_2734_c1 3300050510 Bacteria 15771
264 nmdc:mga06r32_306_c1 3300050510 Bacteria 40619
265 nmdc:mga06r32_30977_c1 3300050510 Bacteria 5021
266 nmdc:mga08y16_28858_c1 3300050511 Bacteria 5849
267 nmdc:mga08y16_67467_c1 3300050511 Bacteria 3731
268 nmdc:mga08y16_69_c1 3300050511 Bacteria 85136
269 nmdc:mga08y16_7299_c1 3300050511 Bacteria 11597
270 nmdc:mga0n895_38367_c1 3300050512 Bacteria 4641
271 nmdc:mga0n895_51783_c1 3300050512 Bacteria 4028
272 nmdc:mga0n895_64365_c1 3300050512 Bacteria 3627
273 nmdc:mga0n895_8516_c1 3300050512 Bacteria 8888
274 nmdc:mga0rr50_40806_c1 3300050513 Bacteria 3376
275 nmdc:mga0rr50_81767_c1 3300050513 Bacteria 2494
276 nmdc:mga08x19_2576_c1 3300050514 Bacteria 11011
277 nmdc:mga08x19_99838_c1 3300050514 Bacteria 1925
278 nmdc:mga0a205_3391_c2 3300050515 Bacteria 12814
279 Ga0500616_0000691 3300053153 Bacteria 39462
280 Ga0501084_0006908 3300054114 Bacteria 9344
281 Ga0501084_0016072 3300054114 Bacteria 6213
282 Ga0501084_0054164 3300054114 Bacteria 3355
283 Ga0590071_005579 3300059421 Bacteria 3025
284 Ga0590075_013977 3300059424 Bacteria 1961
285 Ga0501082_0003224 3300060353 Bacteria 14221
286 Ga0501082_0017899 3300060353 Bacteria 6104
287 Ga0530510_0025721 3300061734 Bacteria 4210
288 Ga0501080_0173477
289 JGI25156J39149_1000113
290 JGI25154J39366_1001135
291 JGI25157J39369_1000080
292 Ga0055539_1001732
293 Ga0065712_10071166
294 Ga0065715_10089362
295 Ga0070670_100006471
296 Ga0070670_100032037
297 Ga0068869_100003319
298 Ga0068869_100012875
299 Ga0068869_100017093
300 Ga0068868_100024978
301 Ga0068868_100117958
302 Ga0070689_100004480
303 Ga0070687_100021370
304 Ga0070661_100022073
305 Ga0070661_100049471
306 Ga0070668_100067272
307 Ga0070669_100006087
308 Ga0070669_100021570
309 Ga0070675_100001578
310 Ga0070675_100063112
311 Ga0070675_100091944
312 Ga0070671_100129033
313 Ga0070674_100020241
314 Ga0070674_100257477
315 Ga0070673_100007852
316 Ga0070688_100001300
317 Ga0070667_100013736
318 Ga0070667_100032075
319 Ga0070667_100104768
320 Ga0070709_10004029
321 Ga0070709_10205231
322 Ga0070705_100004590
323 Ga0070700_100017768
324 Ga0070694_100010518
325 Ga0070694_100023697
326 Ga0070694_100032475
327 Ga0070708_100018115
328 Ga0070678_100009897
329 Ga0070678_100049220
330 Ga0070662_100071765
331 Ga0070662_100177719
332 Ga0070685_10017567
333 Ga0070706_100040441
334 Ga0070706_100059422
335 Ga0070707_100002573
336 Ga0070707_100080069
337 Ga0070707_100233310
338 Ga0070699_100004910
339 Ga0070697_100044307
340 Ga0070672_100079591
341 Ga0070686_100001043
342 Ga0070695_100003429
343 Ga0070696_100017043
344 Ga0070696_100108378
345 Ga0070665_100013284
346 Ga0070665_100126852
347 Ga0068855_100002224
348 Ga0068855_100074271
349 Ga0070664_100001437
350 Ga0070664_100006334
351 Ga0068857_100001231
352 Ga0068857_100072923
353 Ga0068857_100098566
354 Ga0068854_100000535
355 Ga0068856_100000304
356 Ga0070702_100002805
357 Ga0068852_100000309
358 Ga0068859_100001480
359 Ga0068859_100002870
360 Ga0068864_100001875
361 Ga0068864_100055651
362 Ga0068861_100000360
363 Ga0068861_100102492
364 Ga0068851_10000622
365 Ga0068870_10011835
366 Ga0068863_100004515
367 Ga0068863_100008225
368 Ga0068863_100047535
369 Ga0068858_100008535
370 Ga0068858_100084452
371 Ga0068860_100043389
372 Ga0068860_100054631
373 Ga0068860_100113451
374 Ga0068862_100001168
375 Ga0081455_10000148
376 Ga0081539_10000001
377 Ga0097621_100139257
378 Ga0075370_10066722
379 Ga0075428_100000296
380 Ga0075430_100000061
381 Ga0075431_100000006
382 Ga0075431_100005172
383 Ga0075431_100011702
384 Ga0075431_100029595
385 Ga0075431_100035945
386 Ga0075433_10019932
387 Ga0075433_10160120
388 Ga0075429_100004201
389 Ga0068865_100005500
390 Ga0068865_100024869
391 Ga0075436_100000152
392 Ga0075436_100099193
393 Ga0097620_100001479
394 Ga0097620_100002870
395 Ga0075435_100038477
396 Ga0105240_10055049
397 Ga0111539_10001482
398 Ga0111539_10009513
399 Ga0111539_10011066
400 Ga0111539_10059400
401 Ga0111539_10068292
402 Ga0105245_10007891
403 Ga0105247_10000225
404 Ga0114129_10001123
405 Ga0114129_10017206
406 Ga0114129_10062478
407 Ga0105241_10010261
408 Ga0105241_10019503
409 Ga0105248_10004412
410 Ga0105248_10068507
411 Ga0105248_10278015
412 Ga0105237_10143529
413 Ga0105237_10226552
414 Ga0105238_10008718
415 Ga0105238_10098141
416 Ga0105249_10004622
417 Ga0105249_10148154
418 Ga0105239_10021749
419 Ga0157378_10002443
420 Ga0163162_10007316
421 Ga0163162_10032633
422 Ga0163162_10346788
423 Ga0157372_10121822
424 Ga0157375_10095325
425 Ga0157375_10289742
426 Ga0163163_10001284
427 Ga0163163_10106225
428 Ga0157380_10060303
429 Ga0157380_10069284
430 Ga0157379_10015232
431 Ga0163161_10019603
432 Ga0213874_10001084
433 Ga0209646_1000129
434 Ga0209026_1000059
435 Ga0209677_100126
436 Ga0209759_1000081
437 Ga0207656_10005621
438 Ga0207710_10001772
439 Ga0207688_10019997
440 Ga0207643_10050102
441 Ga0207684_10036800
442 Ga0207695_10087881
443 Ga0207662_10008275
444 Ga0207646_10012070
445 Ga0207646_10031597
446 Ga0207646_10114051
447 Ga0207694_10107510
448 Ga0207650_10061840
449 Ga0207659_10002185
450 Ga0207659_10054003
451 Ga0207664_10120061
452 Ga0207644_10018589
453 Ga0207706_10001931
454 Ga0207706_10043499
455 Ga0207669_10001719
456 Ga0207691_10036018
457 Ga0207691_10103600
458 Ga0207711_10082724
459 Ga0207689_10096766
460 Ga0207679_10025958
461 Ga0207679_10026512
462 Ga0207712_10017589
463 Ga0207712_10062936
464 Ga0207658_10128932
465 Ga0207677_10271592
466 Ga0207703_10072880
467 Ga0207708_10004973
468 Ga0207708_10020909
469 Ga0207702_10001084
470 Ga0207702_10099777
471 Ga0207641_10006520
472 Ga0207641_10026725
473 Ga0207648_10006049
474 Ga0207676_10001615
475 Ga0207676_10003705
476 Ga0207676_10186005
477 Ga0207674_10000478
478 Ga0207674_10009731
479 Ga0207674_10067711
480 Ga0207675_100000887
481 Ga0207675_100026562
482 Ga0207683_10008960
483 Ga0207698_10001524
484 Ga0207428_10004151
485 Ga0207428_10005319
486 Ga0207428_10117527
487 Ga0268266_10011371
488 Ga0268266_10094739
489 Ga0268265_10030775
490 Ga0268264_10026292
491 Ga0307405_10011969
492 Ga0307406_10002072
493 Ga0307412_10021008
494 Ga0307409_100027527
495 Ga0307416_100087343
496 Ga0436363_0214036
497 Ga0436363_0482088
498 Ga0451577_0409731
499 Ga0451576_0001930
500 Ga0451576_0072947
501 Ga0451576_0076490
502 Ga0466967_0002464
503 Ga0495658_0144557
504 Ga0495669_0008214
505 Ga0496102_0040051
506 Ga0496104_0024671
507 Ga0496108_0068908
508 Ga0496109_0049122
509 Ga0496110_0072587
510 Ga0496110_0164890
511 Ga0496121_0002416
512 Ga0496125_0038657
513 Ga0501034_0115736
514 Ga0501036_0081354
515 Ga0501038_0012710
516 Ga0501038_0062698
517 Ga0501039_0010400
518 Ga0501039_0047179
519 Ga0501040_0006293
520 Ga0501041_0000885
521 Ga0501041_0109647
522 Ga0501042_0141234
523 Ga0501043_0115496
524 Ga0501046_0011709
525 Ga0501046_0044696
526 Ga0501068_0038739
527 Ga0501072_0043366
528 Ga0501072_0121993
529 Ga0501074_0011780
530 Ga0501074_0039608
531 Ga0501075_0013074
532 Ga0501076_0075579
533 Ga0501077_0010068
534 Ga0501079_0002420
535 Ga0501079_0062569
536 Ga0501080_0038526
537 Ga0501080_0111186
538 Ga0501081_0000963
539 Ga0501081_0013392
540 Ga0501045_0001596
541 Ga0501045_0028853
542 nmdc:mga05p37_723_c1
543 nmdc:mga09592_1353_c1
544 nmdc:mga09592_41224_c1
545 nmdc:mga09592_65002_c1
546 nmdc:mga0qj67_12140_c1
547 nmdc:mga0qj67_17992_c1
548 nmdc:mga0qj67_85_c1
549 nmdc:mga06r32_14528_c1
550 nmdc:mga06r32_2734_c1
551 nmdc:mga06r32_306_c1
552 nmdc:mga06r32_30977_c1
553 nmdc:mga08y16_28858_c1
554 nmdc:mga08y16_67467_c1
555 nmdc:mga08y16_69_c1
556 nmdc:mga08y16_7299_c1
557 nmdc:mga0n895_38367_c1
558 nmdc:mga0n895_51783_c1
559 nmdc:mga0n895_64365_c1
560 nmdc:mga0n895_8516_c1
561 nmdc:mga0rr50_40806_c1
562 nmdc:mga0rr50_81767_c1
563 nmdc:mga08x19_2576_c1
564 nmdc:mga08x19_99838_c1
565 nmdc:mga0a205_3391_c2
566 Ga0500616_0000691
567 Ga0501084_0006908
568 Ga0501084_0016072
569 Ga0501084_0054164
570 Ga0590071_005579
571 Ga0590075_013977
572 Ga0501082_0003224
573 Ga0501082_0017899
574 Ga0530510_0025721

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21686

LigD_Prim-Pol

LigD, primase-polymerase domain

37

289

0.97

PF01896

DNA_primase_S

DNA primase small subunit

132

262

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6sa1-assembly1.cif.gz_A post catalytic complex of prim-polc from mycobacterium smegmatis with gapped dna and 3'-dutp 0.9657 5 311
5dmu-assembly1.cif.gz_A structure of the nhej polymerase from methanocella paludicola 0.9396 1 293
2iry-assembly1.cif.gz_A crystal structure of the polymerase domain from mycobacterium tuberculosis ligase d with dgtp and manganese. 0.9364 17 288
5dmu-assembly1.cif.gz_A structure of the nhej polymerase from methanocella paludicola 0.9125 1 293
2far-assembly2.cif.gz_B crystal structure of pseudomonas aeruginosa ligd polymerase domain with datp and manganese 0.9052 17 299
ID Description Score Start End Superfamily
af_P95226_24_305_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.9716 25 300 3.90.920.10
af_O69697_22_304_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.9712 25 300 3.90.920.10
af_P95226_24_305_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.9479 25 300 3.90.920.10
af_O69697_22_304_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.9444 25 300 3.90.920.10
af_P9WNV3_16_301_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.9344 24 289 3.90.920.10
ID Description Score Start End GO Terms
AF-A0A1Q7BZ75-F1-model_v4 DNA ligase D polymerase domain-containing protein 0.9867 7 311
AF-A0A536HYM9-F1-model_v4 DNA polymerase domain-containing protein 0.9853 7 290
AF-A0A535G9L7-F1-model_v4 DNA primase 0.9826 2 209
AF-A0A535IWF2-F1-model_v4 DNA ligase D polymerase domain-containing protein 0.9814 36 183
AF-A0A2S8MCV2-F1-model_v4 deleted 0.9807 19 269

Map