F388309

General Info

Members Datasets Scaffolds Average Seq Length
287 211 574 541

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2868088558|2868093400
Length 596
Sequence PRAGQPAEPADLVDIARLVTAYYTQHPDATEAAQQVAFGTSGHRGSAFNTAFNDDHIAATSQAICDYRRENGIDGPLFLGKDTHALSEPAWATAVEVFAANGVLLLVDAADRYTPTPAVSHAILRHNSGAGGAVSASMVAAASAAGVPVAAGQGATHYADGVVVTPSHNPPGDGGFKYNPPDGGPAGSDITGWIQSAANRYIEAGLDGVQRIPLARALGADTTSTYDFLGHYVDDLPAVVDIEAIRSSGVRIGADPLGGASVDYWGAIAERHRLDLTVVNPLTDPTWRFMTLDWDGKIRMDCSSPSAMASLIGRMRRDDDASPTAHVQGGAARGVAAHGVEAHGAPFDVATGNDADSDRHGIVTPDHGLMNPNHFLAVAIGYLFDRRDGWPAGAGVGKTLVSSSMIDRVAASLGRPLVEVPVGFKWFVPGLLDGSVGFGGEESAGASFLRRDGGTWSTDKDGIIACLLAAEIIATTGKTPSQHYGLLTDRHGEPVYARVDAPASREQKAALSGLSAEQVTATELAGEPITAKLTRAPGNDAPLGGLKVVTESGWFAARPSGTEDVYKIYAESFRGEDHLAQIQTEARAVVDSVLDG

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
12 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
15 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
20 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
23 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
30 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
31 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
32 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
33 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
34 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
38 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
65 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
66 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
67 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
68 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
69 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
70 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
71 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
72 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
73 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
74 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
75 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
76 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
77 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
78 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
79 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
80 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
81 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
82 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
83 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
84 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
85 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
86 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
87 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
88 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
89 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
90 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
91 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
92 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
93 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
94 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
95 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
96 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
97 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
98 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
99 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
100 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
101 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
102 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
103 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
104 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
105 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
106 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
107 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
108 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
109 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
110 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
111 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
112 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
113 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
114 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
115 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
116 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
117 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
118 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
119 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
132 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
135 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
136 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
137 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
138 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
139 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
143 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
144 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
145 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
146 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
147 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
148 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
149 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
150 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
151 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
152 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
153 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
154 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
155 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
156 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
157 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
158 2643221572 Leifsonia sp. Root60 Isolate Unclassified
159 2643221616 Leifsonia sp. Root227 Isolate Unclassified
160 2643221619 Agromyces sp. Root81 Isolate Unclassified
161 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
162 2643221649 Leifsonia sp. Root4 Isolate Unclassified
163 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
164 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
165 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
166 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
167 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
168 2808606372 Agromyces sp. 23-23 Isolate Unclassified
169 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
170 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
171 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
172 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
173 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
174 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
175 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
176 2855683550 Micromonospora sp. RP3T Isolate Unclassified
177 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
178 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
179 2862574272 Streptomyces sp. AcE210 Isolate Nodule
180 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
181 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
182 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
183 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
184 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
185 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
186 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
187 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
188 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
189 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
190 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
191 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
192 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
193 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
194 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
195 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
196 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
197 2928153084 Leifsonia sp. 563 Isolate Unclassified
198 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
199 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
200 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
201 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
202 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
203 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
204 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
205 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
206 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
207 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
208 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
209 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
210 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere
211 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.44
Metatranscriptomes 0.7
Isolates 19.86

Biome Distribution

Category Percentage (%)
Aerial Root 0.35
Bulb 0
Endosphere 8.71
Nodule 0.35
Rhizoplane 1.39
Rhizosphere 70.03
Stem 0
Stem Tuber 0.35
Unclassified 0.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10000261 3300005327 Bacteria 46322
2 Ga0070658_10003301 3300005327 Bacteria 13309
3 Ga0070658_10010367 3300005327 Bacteria 7476
4 Ga0068869_100156065 3300005334 Bacteria 1773
5 Ga0068868_100007703 3300005338 Bacteria 7682
6 Ga0068868_100040601 3300005338 Bacteria 3622
7 Ga0070668_100052226 3300005347 Bacteria 3151
8 Ga0070671_100155033 3300005355 Bacteria 1935
9 Ga0070659_100000533 3300005366 Bacteria 27802
10 Ga0070659_100009383 3300005366 Bacteria 7186
11 Ga0070667_100032942 3300005367 Bacteria 4325
12 Ga0070672_100117945 3300005543 Bacteria 2170
13 Ga0068855_100022441 3300005563 Bacteria 7566
14 Ga0068855_100183782 3300005563 Bacteria 2363
15 Ga0068857_100011962 3300005577 Bacteria 7547
16 Ga0068854_100064229 3300005578 Bacteria 2667
17 Ga0068852_100008715 3300005616 Bacteria 7496
18 Ga0068852_100070624 3300005616 Bacteria 3064
19 Ga0068859_100208116 3300005617 Bacteria 2042
20 Ga0068861_100032800 3300005719 Bacteria 3827
21 Ga0068851_10000033 3300005834 Bacteria 108511
22 Ga0068863_100024118 3300005841 Bacteria 5804
23 Ga0068858_100000672 3300005842 Bacteria 35686
24 Ga0068858_100181155 3300005842 Bacteria 1989
25 Ga0081539_10002737 3300005985 Bacteria 23826
26 Ga0081539_10070162 3300005985 Bacteria 1882
27 Ga0068865_100103152 3300006881 Bacteria 2091
28 Ga0097620_100208098 3300006931 Bacteria 2042
29 Ga0105245_10022012 3300009098 Bacteria 5594
30 Ga0105245_10057820 3300009098 Bacteria 3489
31 Ga0105248_10000340 3300009177 Bacteria 55043
32 Ga0105248_10042297 3300009177 Bacteria 5109
33 Ga0105237_10012842 3300009545 Bacteria 8806
34 Ga0105238_10001056 3300009551 Bacteria 27824
35 Ga0157371_10000447 3300013102 Bacteria 50553
36 Ga0157369_10001527 3300013105 Bacteria 28378
37 Ga0157369_10020621 3300013105 Bacteria 7370
38 Ga0157369_10032291 3300013105 Bacteria 5760
39 Ga0157369_10106606 3300013105 Bacteria 2982
40 Ga0163162_10091334 3300013306 Bacteria 3128
41 Ga0157372_10116212 3300013307 Bacteria 3067
42 Ga0163163_10005153 3300014325 Bacteria 11268
43 Ga0157380_10039512 3300014326 Bacteria 3670
44 Ga0157379_10004589 3300014968 Bacteria 11854
45 Ga0197907_10552238 3300020069 Bacteria 3641
46 Ga0206353_10339379 3300020082 Bacteria 7951
47 Ga0209677_101287 3300025253 Bacteria 11192
48 Ga0209148_1000601 3300025254 Bacteria 32421
49 Ga0209455_1001168 3300025272 Bacteria 12631
50 Ga0209758_1003750 3300025297 Bacteria 13451
51 Ga0207656_10000001 3300025321 Bacteria 1323684
52 Ga0207643_10034007 3300025908 Bacteria 2854
53 Ga0207705_10000001 3300025909 Bacteria 2061880
54 Ga0207705_10006280 3300025909 Bacteria 8824
55 Ga0207705_10009127 3300025909 Bacteria 7229
56 Ga0207654_10000001 3300025911 Bacteria 1816198
57 Ga0207695_10002446 3300025913 Bacteria 27456
58 Ga0207671_10000001 3300025914 Bacteria 1318881
59 Ga0207662_10008987 3300025918 Bacteria 5486
60 Ga0207657_10011206 3300025919 Bacteria 8914
61 Ga0207657_10011686 3300025919 Bacteria 8700
62 Ga0207694_10000019 3300025924 Bacteria 312382
63 Ga0207687_10071399 3300025927 Bacteria 2481
64 Ga0207644_10049469 3300025931 Bacteria 3010
65 Ga0207706_10088914 3300025933 Bacteria 2715
66 Ga0207709_10063445 3300025935 Bacteria 2316
67 Ga0207691_10133307 3300025940 Bacteria 2193
68 Ga0207691_10154873 3300025940 Bacteria 2013
69 Ga0207711_10000849 3300025941 Bacteria 29540
70 Ga0207711_10110284 3300025941 Bacteria 2447
71 Ga0207689_10005837 3300025942 Bacteria 10915
72 Ga0207667_10000837 3300025949 Bacteria 39713
73 Ga0207667_10016613 3300025949 Bacteria 8308
74 Ga0207667_10020109 3300025949 Bacteria 7434
75 Ga0207668_10012396 3300025972 Bacteria 5219
76 Ga0207658_10005142 3300025986 Bacteria 9010
77 Ga0207677_10018462 3300026023 Bacteria 4186
78 Ga0207703_10002558 3300026035 Bacteria 15714
79 Ga0207708_10016059 3300026075 Bacteria 5623
80 Ga0207708_10080044 3300026075 Bacteria 2510
81 Ga0207641_10065288 3300026088 Bacteria 3113
82 Ga0207674_10011143 3300026116 Bacteria 10111
83 Ga0207674_10060384 3300026116 Bacteria 3834
84 Ga0207675_100031599 3300026118 Bacteria 4932
85 Ga0207698_10003849 3300026142 Bacteria 9083
86 Ga0207698_10006449 3300026142 Bacteria 7323
87 Ga0207698_10072057 3300026142 Bacteria 2745
88 Ga0207698_10143513 3300026142 Bacteria 2061
89 Ga0307517_10005231 3300028786 Bacteria 19629
90 Ga0307514_10001457 3300031649 Bacteria 28865
91 Ga0316576_10101811 3300031727 Bacteria 2147
92 Ga0307413_10011933 3300031824 Bacteria 4299
93 Ga0307410_10007374 3300031852 Bacteria 6018
94 Ga0307409_100008401 3300031995 Bacteria 6264
95 Ga0307416_100028053 3300032002 Bacteria 4181
96 Ga0307415_100015586 3300032126 Bacteria 4506
97 Ga0307510_10114063 3300033180 Bacteria 2433
98 Ga0316574_0046208 3300035398 Bacteria 2699
99 Ga0395899_0001280 3300037312 Bacteria 21799
100 Ga0395900_0003210 3300037418 Bacteria 17703
101 Ga0400491_27984 3300038727 Bacteria 2903
102 Ga0400485_13603 3300038735 Bacteria 43208
103 Ga0400485_18269 3300038735 Bacteria 31127
104 Ga0400486_29560 3300038742 Unclassified 3252
105 Ga0400486_31841 3300038742 Bacteria 22040
106 Ga0400483_190896 3300039062 Bacteria 3450
107 Ga0400489_83141 3300039093 Bacteria 9910
108 Ga0400487_21303 3300039110 Bacteria 74949
109 Ga0439436_0009227 3300041404 Bacteria 3026
110 Ga0439439_0004497 3300041406 Bacteria 3149
111 Ga0439433_0008228 3300041999 Bacteria 2258
112 Ga0439457_000581 3300042014 Bacteria 10692
113 Ga0466961_0045713 3300044693 Bacteria 2801
114 Ga0466964_0012751 3300044706 Bacteria 3183
115 Ga0466970_0032386 3300044765 Bacteria 2762
116 Ga0466960_0002431 3300044901 Bacteria 7018
117 Ga0466960_0003269 3300044901 Bacteria 6210
118 Ga0466960_0007429 3300044901 Bacteria 4452
119 Ga0466958_0015645 3300045836 Bacteria 4352
120 Ga0466958_0067821 3300045836 Bacteria 2180
121 Ga0466967_0007800 3300045976 Bacteria 7774
122 Ga0495603_0003595 3300046455 Bacteria 9220
123 Ga0495590_0000076 3300046457 Bacteria 68651
124 Ga0495650_0002210 3300046471 Bacteria 16395
125 Ga0495585_0015399 3300046492 Bacteria 4445
126 Ga0495643_0001389 3300046522 Bacteria 22605
127 Ga0495643_0001852 3300046522 Bacteria 17959
128 Ga0495652_0077232 3300046529 Bacteria 2761
129 Ga0495611_0027637 3300046648 Bacteria 2481
130 Ga0495649_0044525 3300046694 Bacteria 2423
131 Ga0495636_0027263 3300047318 Bacteria 2328
132 Ga0495672_0026607 3300047320 Bacteria 3689
133 Ga0495676_0018825 3300047321 Bacteria 6086
134 Ga0495687_047136 3300047443 Bacteria 1856
135 Ga0495686_0036472 3300047472 Bacteria 3155
136 Ga0496102_0029076 3300048905 Bacteria 4941
137 Ga0496106_0023486 3300048909 Bacteria 4581
138 Ga0496107_0014395 3300048910 Bacteria 5539
139 Ga0496110_0099111 3300048913 Bacteria 2612
140 Ga0496116_0028555 3300048919 Bacteria 4038
141 Ga0496117_0000226 3300048920 Bacteria 106213
142 Ga0496117_0000255 3300048920 Bacteria 100069
143 Ga0496117_0015826 3300048920 Bacteria 6401
144 Ga0496117_0051404 3300048920 Bacteria 2913
145 Ga0496118_0000229 3300048921 Bacteria 98023
146 Ga0496119_0001294 3300048922 Bacteria 30906
147 Ga0496119_0005076 3300048922 Bacteria 12780
148 Ga0496120_0000600 3300048923 Bacteria 54546
149 Ga0496120_0009919 3300048923 Bacteria 6706
150 Ga0496120_0044848 3300048923 Bacteria 2566
151 Ga0496120_0050321 3300048923 Bacteria 2386
152 Ga0496121_0000046 3300048924 Bacteria 335942
153 Ga0496121_0056555 3300048924 Bacteria 3258
154 Ga0496122_0001668 3300048925 Bacteria 34430
155 Ga0496123_0000363 3300048926 Bacteria 85560
156 Ga0496123_0044454 3300048926 Bacteria 3037
157 Ga0496124_0000301 3300048927 Bacteria 91222
158 Ga0496124_0022243 3300048927 Bacteria 5819
159 Ga0496126_0001052 3300048929 Bacteria 46677
160 Ga0501032_0006778 3300049569 Bacteria 8405
161 Ga0501032_0009604 3300049569 Bacteria 7010
162 Ga0501032_0070466 3300049569 Bacteria 2331
163 Ga0501033_0025312 3300049570 Bacteria 4469
164 Ga0501033_0029723 3300049570 Bacteria 4106
165 Ga0501034_0016786 3300049571 Bacteria 7507
166 Ga0501034_0022968 3300049571 Bacteria 6356
167 Ga0501034_0035243 3300049571 Bacteria 5073
168 Ga0501034_0042831 3300049571 Bacteria 4583
169 Ga0501034_0060938 3300049571 Bacteria 3790
170 Ga0501034_0070481 3300049571 Bacteria 3506
171 Ga0501034_0099940 3300049571 Bacteria 2895
172 Ga0501034_0208995 3300049571 Bacteria 1907
173 Ga0501036_0112602 3300049572 Bacteria 2299
174 Ga0501037_0001812 3300049573 Bacteria 15524
175 Ga0501037_0012465 3300049573 Bacteria 6263
176 Ga0501037_0025438 3300049573 Bacteria 4374
177 Ga0501037_0076414 3300049573 Bacteria 2431
178 Ga0501037_0083265 3300049573 Bacteria 2317
179 Ga0501038_0035509 3300049574 Bacteria 4376
180 Ga0501039_0040952 3300049575 Bacteria 3576
181 Ga0501042_0048577 3300049578 Bacteria 3026
182 Ga0501043_0006280 3300049579 Bacteria 9539
183 Ga0501043_0013795 3300049579 Bacteria 6323
184 Ga0501043_0061535 3300049579 Bacteria 2948
185 Ga0501046_0028149 3300049580 Bacteria 4579
186 Ga0501046_0084722 3300049580 Bacteria 2444
187 Ga0501047_0001493 3300049581 Bacteria 22795
188 Ga0501047_0006101 3300049581 Bacteria 11326
189 Ga0501047_0015233 3300049581 Bacteria 7324
190 Ga0501047_0061832 3300049581 Bacteria 3613
191 Ga0501047_0062844 3300049581 Bacteria 3582
192 Ga0501048_0055108 3300049582 Bacteria 2823
193 Ga0501068_0005265 3300049584 Bacteria 7064
194 Ga0501069_0016894 3300049585 Bacteria 3921
195 Ga0501070_0003147 3300049586 Bacteria 14369
196 Ga0501070_0012903 3300049586 Bacteria 7042
197 Ga0501071_0000579 3300049587 Bacteria 18924
198 Ga0501072_0062503 3300049588 Bacteria 2937
199 Ga0501073_0000025 3300049589 Bacteria 127490
200 Ga0501073_0016356 3300049589 Bacteria 5377
201 Ga0501073_0024564 3300049589 Bacteria 4327
202 Ga0501073_0031800 3300049589 Bacteria 3764
203 Ga0501074_0084306 3300049590 Bacteria 2278
204 Ga0501080_0000339 3300049742 Bacteria 35944
205 Ga0501083_0000051 3300049744 Bacteria 85348
206 Ga0501083_0001677 3300049744 Bacteria 15124
207 Ga0501083_0003989 3300049744 Bacteria 10369
208 Ga0501035_0004510 3300049822 Bacteria 13214
209 Ga0501044_0102691 3300049823 Bacteria 2874
210 nmdc:mga0sz30_3144_c2 3300050516 Bacteria 5398
211 Ga0500635_0000006 3300053080 Bacteria 187108
212 Ga0500643_000181 3300053087 Bacteria 61492
213 Ga0500556_0000008 3300053104 Bacteria 304943
214 Ga0500556_0000108 3300053104 Bacteria 74136
215 Ga0500560_001059 3300053107 Bacteria 4470
216 Ga0500593_000752 3300053117 Bacteria 12159
217 Ga0500559_0000169 3300053136 Bacteria 51761
218 Ga0500559_0000686 3300053136 Bacteria 22491
219 Ga0500568_0000003 3300053139 Bacteria 863587
220 Ga0500568_0000072 3300053139 Bacteria 98290
221 Ga0500568_0024970 3300053139 Bacteria 2525
222 Ga0500573_0000024 3300053140 Bacteria 151713
223 Ga0500573_0002366 3300053140 Bacteria 9399
224 Ga0500573_0002931 3300053140 Bacteria 8696
225 Ga0500616_0000010 3300053153 Bacteria 761410
226 Ga0500616_0000209 3300053153 Bacteria 94705
227 Ga0500616_0006592 3300053153 Bacteria 7568
228 Ga0500633_0021458 3300053160 Bacteria 1964
229 Ga0500645_011854 3300053730 Bacteria 2832
230 Ga0500656_001055 3300053732 Bacteria 2265
231 2868093400 2868088558 Bacteria 7609351
232 2585318116 2582581314 Bacteria 11452267
233 2587862175 2585428094 Bacteria 3604039
234 2643877349 2643221572 Bacteria 3614809
235 2644094255 2643221616 Bacteria 4066575
236 2644113244 2643221619 Bacteria 4158469
237 2644181540 2643221632 Bacteria 3406696
238 2644279984 2643221649 Bacteria 3867359
239 2644384404 2643221669 Bacteria 3611286
240 2676475889 2675903058 Bacteria 6822861
241 2723640312 2721755702 Bacteria 4373124
242 2753300836 2751185788 Bacteria 4541048
243 2808846064 2808606359 Bacteria 9866990
244 2808899553 2808606372 Bacteria 4649509
245 2812361743 2811994879 Bacteria 9313447
246 2816506599 2816332139 Bacteria 9138787
247 2827630451 2827628540 Bacteria 6858585
248 2837273685 2837268691 Bacteria 7850704
249 2844844108 2844841374 Bacteria 3917147
250 2844853828 2844852863 Bacteria 3849151
251 2852642998 2852635781 Bacteria 8251373
252 2855683694 2855683550 Bacteria 7134265
253 2857731653 2857729791 Bacteria 4040535
254 2857737328 2857737099 Bacteria 3104305
255 2862574904 2862574272 Bacteria 10567477
256 2862994294 2862993130 Bacteria 3860849
257 2870625134 2870622029 Bacteria 3643329
258 2884700743 2884693830 Bacteria 11273186
259 2884763706 2884763398 Bacteria 4091164
260 2895452540 2895442618 Bacteria 11027144
261 2895661839 2895660088 Bacteria 3782833
262 2904431235 2904430863 Bacteria 3486923
263 2904504633 2904501621 Bacteria 3401437
264 2908674939 2908674828 Bacteria 3382763
265 2909075745 2909074476 Bacteria 3436050
266 2919041008 2919039151 Bacteria 3391018
267 2919046009 2919042368 Bacteria 3905917
268 2919056023 2919055335 Bacteria 3875751
269 2919444361 2919443155 Bacteria 4072969
270 2919526035 2919523602 Bacteria 3788128
271 2928106634 2928104781 Bacteria 3877447
272 2928124444 2928121344 Bacteria 3972376
273 2928154167 2928153084 Bacteria 4020257
274 2928501907 2928500415 Bacteria 3384541
275 2935409825 2935409751 Bacteria 4179611
276 2939659906 2939657138 Bacteria 3740283
277 2946064422 2946064051 Bacteria 8957905
278 2964327710 2964326757 Bacteria 3290868
279 2966922494 2966921586 Bacteria 3092803
280 2984552898 2984551494 Bacteria 3877562
281 3006493971 3006493962 Bacteria 8825450
282 8046354899 8046352972 Bacteria 3613806
283 8055071017 8055066027 Bacteria 9479577
284 8055177977 8055172936 Bacteria 9305943
285 8056040539 8056037122 Bacteria 3854319
286 8056830577 8056829672 Bacteria 9045328
287 8057346780 8057345674 Bacteria 4160394
288 Ga0070658_10000261
289 Ga0070658_10003301
290 Ga0070658_10010367
291 Ga0068869_100156065
292 Ga0068868_100007703
293 Ga0068868_100040601
294 Ga0070668_100052226
295 Ga0070671_100155033
296 Ga0070659_100000533
297 Ga0070659_100009383
298 Ga0070667_100032942
299 Ga0070672_100117945
300 Ga0068855_100022441
301 Ga0068855_100183782
302 Ga0068857_100011962
303 Ga0068854_100064229
304 Ga0068852_100008715
305 Ga0068852_100070624
306 Ga0068859_100208116
307 Ga0068861_100032800
308 Ga0068851_10000033
309 Ga0068863_100024118
310 Ga0068858_100000672
311 Ga0068858_100181155
312 Ga0081539_10002737
313 Ga0081539_10070162
314 Ga0068865_100103152
315 Ga0097620_100208098
316 Ga0105245_10022012
317 Ga0105245_10057820
318 Ga0105248_10000340
319 Ga0105248_10042297
320 Ga0105237_10012842
321 Ga0105238_10001056
322 Ga0157371_10000447
323 Ga0157369_10001527
324 Ga0157369_10020621
325 Ga0157369_10032291
326 Ga0157369_10106606
327 Ga0163162_10091334
328 Ga0157372_10116212
329 Ga0163163_10005153
330 Ga0157380_10039512
331 Ga0157379_10004589
332 Ga0197907_10552238
333 Ga0206353_10339379
334 Ga0209677_101287
335 Ga0209148_1000601
336 Ga0209455_1001168
337 Ga0209758_1003750
338 Ga0207656_10000001
339 Ga0207643_10034007
340 Ga0207705_10000001
341 Ga0207705_10006280
342 Ga0207705_10009127
343 Ga0207654_10000001
344 Ga0207695_10002446
345 Ga0207671_10000001
346 Ga0207662_10008987
347 Ga0207657_10011206
348 Ga0207657_10011686
349 Ga0207694_10000019
350 Ga0207687_10071399
351 Ga0207644_10049469
352 Ga0207706_10088914
353 Ga0207709_10063445
354 Ga0207691_10133307
355 Ga0207691_10154873
356 Ga0207711_10000849
357 Ga0207711_10110284
358 Ga0207689_10005837
359 Ga0207667_10000837
360 Ga0207667_10016613
361 Ga0207667_10020109
362 Ga0207668_10012396
363 Ga0207658_10005142
364 Ga0207677_10018462
365 Ga0207703_10002558
366 Ga0207708_10016059
367 Ga0207708_10080044
368 Ga0207641_10065288
369 Ga0207674_10011143
370 Ga0207674_10060384
371 Ga0207675_100031599
372 Ga0207698_10003849
373 Ga0207698_10006449
374 Ga0207698_10072057
375 Ga0207698_10143513
376 Ga0307517_10005231
377 Ga0307514_10001457
378 Ga0316576_10101811
379 Ga0307413_10011933
380 Ga0307410_10007374
381 Ga0307409_100008401
382 Ga0307416_100028053
383 Ga0307415_100015586
384 Ga0307510_10114063
385 Ga0316574_0046208
386 Ga0395899_0001280
387 Ga0395900_0003210
388 Ga0400491_27984
389 Ga0400485_13603
390 Ga0400485_18269
391 Ga0400486_29560
392 Ga0400486_31841
393 Ga0400483_190896
394 Ga0400489_83141
395 Ga0400487_21303
396 Ga0439436_0009227
397 Ga0439439_0004497
398 Ga0439433_0008228
399 Ga0439457_000581
400 Ga0466961_0045713
401 Ga0466964_0012751
402 Ga0466970_0032386
403 Ga0466960_0002431
404 Ga0466960_0003269
405 Ga0466960_0007429
406 Ga0466958_0015645
407 Ga0466958_0067821
408 Ga0466967_0007800
409 Ga0495603_0003595
410 Ga0495590_0000076
411 Ga0495650_0002210
412 Ga0495585_0015399
413 Ga0495643_0001389
414 Ga0495643_0001852
415 Ga0495652_0077232
416 Ga0495611_0027637
417 Ga0495649_0044525
418 Ga0495636_0027263
419 Ga0495672_0026607
420 Ga0495676_0018825
421 Ga0495687_047136
422 Ga0495686_0036472
423 Ga0496102_0029076
424 Ga0496106_0023486
425 Ga0496107_0014395
426 Ga0496110_0099111
427 Ga0496116_0028555
428 Ga0496117_0000226
429 Ga0496117_0000255
430 Ga0496117_0015826
431 Ga0496117_0051404
432 Ga0496118_0000229
433 Ga0496119_0001294
434 Ga0496119_0005076
435 Ga0496120_0000600
436 Ga0496120_0009919
437 Ga0496120_0044848
438 Ga0496120_0050321
439 Ga0496121_0000046
440 Ga0496121_0056555
441 Ga0496122_0001668
442 Ga0496123_0000363
443 Ga0496123_0044454
444 Ga0496124_0000301
445 Ga0496124_0022243
446 Ga0496126_0001052
447 Ga0501032_0006778
448 Ga0501032_0009604
449 Ga0501032_0070466
450 Ga0501033_0025312
451 Ga0501033_0029723
452 Ga0501034_0016786
453 Ga0501034_0022968
454 Ga0501034_0035243
455 Ga0501034_0042831
456 Ga0501034_0060938
457 Ga0501034_0070481
458 Ga0501034_0099940
459 Ga0501034_0208995
460 Ga0501036_0112602
461 Ga0501037_0001812
462 Ga0501037_0012465
463 Ga0501037_0025438
464 Ga0501037_0076414
465 Ga0501037_0083265
466 Ga0501038_0035509
467 Ga0501039_0040952
468 Ga0501042_0048577
469 Ga0501043_0006280
470 Ga0501043_0013795
471 Ga0501043_0061535
472 Ga0501046_0028149
473 Ga0501046_0084722
474 Ga0501047_0001493
475 Ga0501047_0006101
476 Ga0501047_0015233
477 Ga0501047_0061832
478 Ga0501047_0062844
479 Ga0501048_0055108
480 Ga0501068_0005265
481 Ga0501069_0016894
482 Ga0501070_0003147
483 Ga0501070_0012903
484 Ga0501071_0000579
485 Ga0501072_0062503
486 Ga0501073_0000025
487 Ga0501073_0016356
488 Ga0501073_0024564
489 Ga0501073_0031800
490 Ga0501074_0084306
491 Ga0501080_0000339
492 Ga0501083_0000051
493 Ga0501083_0001677
494 Ga0501083_0003989
495 Ga0501035_0004510
496 Ga0501044_0102691
497 nmdc:mga0sz30_3144_c2
498 Ga0500635_0000006
499 Ga0500643_000181
500 Ga0500556_0000008
501 Ga0500556_0000108
502 Ga0500560_001059
503 Ga0500593_000752
504 Ga0500559_0000169
505 Ga0500559_0000686
506 Ga0500568_0000003
507 Ga0500568_0000072
508 Ga0500568_0024970
509 Ga0500573_0000024
510 Ga0500573_0002366
511 Ga0500573_0002931
512 Ga0500616_0000010
513 Ga0500616_0000209
514 Ga0500616_0006592
515 Ga0500633_0021458
516 Ga0500645_011854
517 Ga0500656_001055
518 2868093400
519 2585318116
520 2587862175
521 2643877349
522 2644094255
523 2644113244
524 2644181540
525 2644279984
526 2644384404
527 2676475889
528 2723640312
529 2753300836
530 2808846064
531 2808899553
532 2812361743
533 2816506599
534 2827630451
535 2837273685
536 2844844108
537 2844853828
538 2852642998
539 2855683694
540 2857731653
541 2857737328
542 2862574904
543 2862994294
544 2870625134
545 2884700743
546 2884763706
547 2895452540
548 2895661839
549 2904431235
550 2904504633
551 2908674939
552 2909075745
553 2919041008
554 2919046009
555 2919056023
556 2919444361
557 2919526035
558 2928106634
559 2928124444
560 2928154167
561 2928501907
562 2935409825
563 2939659906
564 2946064422
565 2964327710
566 2966922494
567 2984552898
568 3006493971
569 8046354899
570 8055071017
571 8055177977
572 8056040539
573 8056830577
574 8057346780

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02878

PGM_PMM_I

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I

35

204

0.96

PF02880

PGM_PMM_III

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III

371

490

0.95

PF00408

PGM_PMM_IV

Phosphoglucomutase/phosphomannomutase, C-terminal domain

504

589

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fuv-assembly1.cif.gz_B phosphoglucomutase from salmonella typhimurium. 0.9697 1 539
2fuv-assembly1.cif.gz_B phosphoglucomutase from salmonella typhimurium. 0.9679 1 539
2z0f-assembly1.cif.gz_B crystal structure of putative phosphoglucomutase from thermus thermophilus hb8 0.9667 15 538
2z0f-assembly1.cif.gz_A crystal structure of putative phosphoglucomutase from thermus thermophilus hb8 0.9663 15 538
2z0f-assembly1.cif.gz_B crystal structure of putative phosphoglucomutase from thermus thermophilus hb8 0.9647 15 538
ID Description Score Start End Superfamily
3na5B03 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.9953 312 436 3.40.120.10
3na5B03 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.9875 312 436 3.40.120.10
3na5B02 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.9742 217 310 3.40.120.10
2fuvB04 Alpha Beta;2-Layer Sandwich;TATA-Binding Protein;Alpha-D-phosphohexomutase, C-terminal domain 0.9668 438 539 3.30.310.50
3na5B02 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.9541 217 310 3.40.120.10
ID Description Score Start End GO Terms
AF-A0A6G3VGS7-F1-model_v4 deleted 1.005 325 400
AF-A0A6B3FA07-F1-model_v4 Phosphoglucomutase, alpha-D-glucose phosphate-specific (EC 5.4.2.2) 0.9981 302 405 GO:0004614
GO:0005829
GO:0005975
AF-A0A4U9DA85-F1-model_v4 Phosphoglucomutase (EC 5.4.2.2) 0.9969 462 537 GO:0004614
AF-A0A1R4IUL5-F1-model_v4 Phosphoglucomutase (EC 5.4.2.2) 0.9964 1 538 GO:0000287
GO:0004614
GO:0005975
GO:0006166
GO:0008973
AF-A0A7J5BNT1-F1-model_v4 Alpha-D-glucose phosphate-specific phosphoglucomutase (EC 5.4.2.2) 0.9961 1 537 GO:0000287
GO:0004614
GO:0005975
GO:0006166
GO:0008973

Map