F388692

General Info

Members Datasets Scaffolds Average Seq Length
288 184 576 325

Family's Representative Sequence

Representative Sequence 3300035090|Ga0373949_0000037|Ga0373949_0000037_196_1299
Length 367
Sequence VKVVSTSALPIDLAGQVTAALPGTVVDVPTAGHVAIDRIDLSDTDALVCLLLDRIDAALLARAPRLRVVANCAVGYDNVDLAAATAAGVCVTNTPDVLTEATAELAFTLLLACARRLGEGERLIRSGAWTGWALDQLLGMGLTGKTLGIIGYGRIGRALARRALGFGMNVIYADPLAKIDDVESEDEDANRPGNLASAELPGAGPRDATRGGVNGPALPVLRGRERPLSIDDVFASADAISLHCPLTPETHHLVNAHRLARMKPSAILVNTARGGCVDEPALIQALRDGRIFGAALDVYSREPEIPPDLLACPRLILAPHIGSATTETRTAMAQLCANAVIAVLRGHRPPNLVNHVTSMESPWSRRS

Samples

Sample ID Description Type Environment
1 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
4 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
5 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
6 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
7 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
8 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
9 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
10 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
11 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
12 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
46 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
47 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
104 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
108 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
109 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
110 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
111 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
112 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
115 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
116 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
117 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
118 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
119 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
120 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
123 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
124 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
125 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
126 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
127 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
128 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
129 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
130 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
131 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
132 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
133 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
134 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
135 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
136 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
137 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
138 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
139 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
140 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
141 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
142 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
143 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
144 3300049530 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
145 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
151 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
152 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
153 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
154 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
155 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
156 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
157 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
158 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
159 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
160 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
161 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
162 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
163 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
164 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
165 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
166 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
167 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
168 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
169 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
170 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
171 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
172 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
173 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
174 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
175 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
176 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
177 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
178 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
179 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
180 2775507255 Sphingobium indicum B90A Isolate Rhizosphere
181 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
182 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
183 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
184 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.88
Metatranscriptomes 0.35
Isolates 2.78

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.38
Nodule 0
Rhizoplane 1.04
Rhizosphere 82.29
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373949_0000037 3300035090 Bacteria 47703
2 SwRhRL2b_contig_3789888 2162886007 Bacteria 1374
3 JGI24736J21556_1000868 3300001904 Bacteria 5571
4 JGI24741J21665_1000154 3300001915 Bacteria 19576
5 JGI24740J21852_10001089 3300001979 Bacteria 12273
6 JGI24739J22299_10000294 3300001989 Bacteria 16860
7 JGI24735J21928_10002700 3300002067 Bacteria 6127
8 JGI24738J21930_10001697 3300002075 Bacteria 6028
9 JGI24749J21850_1000227 3300002076 Bacteria 8841
10 JGI24751J29686_10000366 3300002459 Bacteria 15436
11 Ga0065704_10004641 3300005289 Bacteria 5469
12 Ga0065707_10104580 3300005295 Bacteria 2688
13 Ga0065707_10153332 3300005295 Bacteria 1634
14 Ga0070658_10001688 3300005327 Bacteria 18643
15 Ga0070658_10272168 3300005327 Bacteria 1440
16 Ga0070690_100014251 3300005330 Bacteria 4715
17 Ga0070670_100001111 3300005331 Bacteria 21391
18 Ga0070670_100003440 3300005331 Bacteria 13135
19 Ga0070670_100006621 3300005331 Bacteria 9821
20 Ga0070670_100104092 3300005331 Bacteria 2445
21 Ga0068869_100133256 3300005334 Bacteria 1912
22 Ga0068869_100321082 3300005334 Bacteria 1256
23 Ga0070666_10000063 3300005335 Bacteria 80378
24 Ga0070666_10005988 3300005335 Bacteria 7469
25 Ga0070666_10117662 3300005335 Bacteria 1841
26 Ga0070661_100113228 3300005344 Bacteria 2027
27 Ga0070668_100000008 3300005347 Bacteria 137948
28 Ga0070668_100001336 3300005347 Bacteria 17622
29 Ga0070668_100019826 3300005347 Bacteria 5066
30 Ga0070669_100000042 3300005353 Bacteria 123396
31 Ga0070669_100000049 3300005353 Bacteria 115183
32 Ga0070669_100006880 3300005353 Bacteria 8173
33 Ga0070669_100238394 3300005353 Bacteria 1444
34 Ga0070671_100000002 3300005355 Bacteria 292733
35 Ga0070671_100000064 3300005355 Bacteria 72180
36 Ga0070688_100170938 3300005365 Bacteria 1500
37 Ga0070659_100072880 3300005366 Bacteria 2733
38 Ga0070667_100000003 3300005367 Bacteria 447715
39 Ga0070667_100000062 3300005367 Bacteria 143729
40 Ga0070667_100000098 3300005367 Bacteria 108706
41 Ga0070667_100008204 3300005367 Bacteria 8659
42 Ga0070705_100055875 3300005440 Bacteria 2322
43 Ga0070708_100145087 3300005445 Bacteria 2204
44 Ga0070663_100010847 3300005455 Bacteria 5693
45 Ga0070679_100130711 3300005530 Bacteria 2492
46 Ga0070684_100184741 3300005535 Bacteria 1896
47 Ga0070665_100005897 3300005548 Bacteria 12552
48 Ga0068855_100082148 3300005563 Bacteria 3735
49 Ga0068855_100122869 3300005563 Bacteria 2970
50 Ga0068857_100143386 3300005577 Bacteria 2160
51 Ga0068857_100148090 3300005577 Bacteria 2125
52 Ga0068854_100006158 3300005578 Bacteria 7615
53 Ga0068854_100076203 3300005578 Bacteria 2464
54 Ga0068856_100025029 3300005614 Bacteria 5818
55 Ga0068856_100030426 3300005614 Bacteria 5277
56 Ga0068856_100268591 3300005614 Bacteria 1721
57 Ga0068852_100000582 3300005616 Bacteria 24092
58 Ga0068859_100002706 3300005617 Bacteria 17985
59 Ga0068859_100019900 3300005617 Bacteria 6737
60 Ga0068859_100032031 3300005617 Bacteria 5281
61 Ga0068859_100309365 3300005617 Bacteria 1674
62 Ga0068864_100000767 3300005618 Bacteria 26986
63 Ga0068864_100003415 3300005618 Bacteria 13135
64 Ga0068864_100010911 3300005618 Bacteria 7512
65 Ga0068864_100206248 3300005618 Bacteria 1808
66 Ga0068861_100000148 3300005719 Bacteria 36127
67 Ga0068861_100001005 3300005719 Bacteria 17210
68 Ga0068861_100057469 3300005719 Bacteria 2972
69 Ga0068851_10030384 3300005834 Bacteria 2679
70 Ga0068863_100000054 3300005841 Bacteria 124495
71 Ga0068863_100009707 3300005841 Bacteria 9389
72 Ga0068863_100015872 3300005841 Bacteria 7224
73 Ga0068863_100017375 3300005841 Bacteria 6897
74 Ga0068858_100000588 3300005842 Bacteria 38216
75 Ga0068858_100008633 3300005842 Bacteria 9786
76 Ga0068860_100000045 3300005843 Bacteria 223252
77 Ga0068860_100000164 3300005843 Bacteria 108706
78 Ga0068860_100004315 3300005843 Bacteria 14542
79 Ga0068860_100018339 3300005843 Bacteria 6809
80 Ga0068862_100000001 3300005844 Bacteria 523031
81 Ga0068862_100000449 3300005844 Bacteria 44685
82 Ga0068862_100007780 3300005844 Bacteria 8862
83 Ga0068862_100295744 3300005844 Bacteria 1488
84 Ga0070717_10040030 3300006028 Bacteria 3816
85 Ga0075368_10001434 3300006042 Bacteria 7630
86 Ga0075363_100080036 3300006048 Bacteria 1786
87 Ga0075367_10000150 3300006178 Bacteria 21514
88 Ga0075430_100090390 3300006846 Bacteria 2561
89 Ga0075431_100040456 3300006847 Bacteria 4805
90 Ga0075429_100012017 3300006880 Bacteria 7506
91 Ga0097620_100002706 3300006931 Bacteria 17985
92 Ga0097620_100019900 3300006931 Bacteria 6737
93 Ga0097620_100032030 3300006931 Bacteria 5281
94 Ga0097620_100309353 3300006931 Bacteria 1674
95 Ga0105251_10028615 3300009011 Bacteria 2813
96 Ga0105245_10000081 3300009098 Bacteria 96155
97 Ga0105247_10011086 3300009101 Bacteria 5437
98 Ga0105248_10003130 3300009177 Bacteria 18311
99 Ga0105248_10057005 3300009177 Bacteria 4384
100 Ga0105237_10025779 3300009545 Bacteria 6012
101 Ga0105237_10327119 3300009545 Bacteria 1537
102 Ga0105238_10202323 3300009551 Bacteria 1962
103 Ga0105249_10006586 3300009553 Bacteria 10107
104 Ga0105249_10187344 3300009553 Bacteria 2017
105 Ga0105148_100037 3300009978 Bacteria 19472
106 Ga0105239_10225831 3300010375 Bacteria 2101
107 Ga0157374_10014444 3300013296 Bacteria 6911
108 Ga0157378_10065335 3300013297 Bacteria 3256
109 Ga0163162_10003776 3300013306 Bacteria 14517
110 Ga0163163_10022744 3300014325 Bacteria 5940
111 Ga0157380_10000117 3300014326 Bacteria 43820
112 Ga0157379_10011635 3300014968 Bacteria 7683
113 Ga0157376_10058195 3300014969 Bacteria 3236
114 Ga0163161_10151314 3300017792 Bacteria 1764
115 Ga0163161_10182468 3300017792 Bacteria 1610
116 Ga0213876_10033967 3300021384 Bacteria 2689
117 Ga0209147_101877 3300025229 Bacteria 6405
118 Ga0207697_10002057 3300025315 Bacteria 10594
119 Ga0207656_10002860 3300025321 Bacteria 5879
120 Ga0207710_10002965 3300025900 Bacteria 7682
121 Ga0207680_10000336 3300025903 Bacteria 22431
122 Ga0207680_10007736 3300025903 Bacteria 5253
123 Ga0207680_10063410 3300025903 Bacteria 2262
124 Ga0207680_10100457 3300025903 Bacteria 1858
125 Ga0207647_10006385 3300025904 Bacteria 8573
126 Ga0207705_10000004 3300025909 Bacteria 705756
127 Ga0207654_10022694 3300025911 Bacteria 3352
128 Ga0207657_10014805 3300025919 Bacteria 7593
129 Ga0207681_10000002 3300025923 Bacteria 985597
130 Ga0207681_10000005 3300025923 Bacteria 555724
131 Ga0207681_10013583 3300025923 Bacteria 5043
132 Ga0207681_10091130 3300025923 Bacteria 2177
133 Ga0207694_10003983 3300025924 Bacteria 11645
134 Ga0207694_10005568 3300025924 Bacteria 9648
135 Ga0207650_10000004 3300025925 Bacteria 743372
136 Ga0207650_10002404 3300025925 Bacteria 13042
137 Ga0207650_10011490 3300025925 Bacteria 6095
138 Ga0207650_10034910 3300025925 Bacteria 3649
139 Ga0207687_10001036 3300025927 Bacteria 18879
140 Ga0207644_10000002 3300025931 Bacteria 942221
141 Ga0207644_10000078 3300025931 Bacteria 72212
142 Ga0207644_10043872 3300025931 Bacteria 3175
143 Ga0207690_10117764 3300025932 Bacteria 1924
144 Ga0207670_10037351 3300025936 Bacteria 3165
145 Ga0207711_10004029 3300025941 Bacteria 12608
146 Ga0207689_10119584 3300025942 Bacteria 2167
147 Ga0207667_10114865 3300025949 Bacteria 2775
148 Ga0207712_10057676 3300025961 Bacteria 2741
149 Ga0207668_10000480 3300025972 Bacteria 24978
150 Ga0207668_10000924 3300025972 Bacteria 17639
151 Ga0207668_10001038 3300025972 Bacteria 16583
152 Ga0207668_10030180 3300025972 Bacteria 3561
153 Ga0207640_10024905 3300025981 Bacteria 3616
154 Ga0207640_10040985 3300025981 Bacteria 2942
155 Ga0207658_10000002 3300025986 Bacteria 1364188
156 Ga0207658_10000039 3300025986 Bacteria 143707
157 Ga0207658_10000196 3300025986 Bacteria 63933
158 Ga0207658_10008924 3300025986 Bacteria 6799
159 Ga0207703_10000587 3300026035 Bacteria 37079
160 Ga0207639_10000387 3300026041 Bacteria 30349
161 Ga0207639_10003181 3300026041 Bacteria 11040
162 Ga0207678_10001685 3300026067 Bacteria 20296
163 Ga0207702_10017997 3300026078 Bacteria 5849
164 Ga0207702_10299685 3300026078 Bacteria 1525
165 Ga0207641_10000095 3300026088 Bacteria 124498
166 Ga0207641_10000583 3300026088 Bacteria 40220
167 Ga0207641_10005235 3300026088 Bacteria 11094
168 Ga0207641_10007060 3300026088 Bacteria 9381
169 Ga0207641_10009799 3300026088 Bacteria 7888
170 Ga0207641_10018698 3300026088 Bacteria 5680
171 Ga0207676_10000006 3300026095 Bacteria 681936
172 Ga0207676_10008084 3300026095 Bacteria 7476
173 Ga0207676_10115520 3300026095 Bacteria 2254
174 Ga0207674_10020967 3300026116 Bacteria 7049
175 Ga0207674_10280785 3300026116 Bacteria 1613
176 Ga0207675_100000355 3300026118 Bacteria 43840
177 Ga0207675_100003637 3300026118 Bacteria 15029
178 Ga0207675_100134694 3300026118 Bacteria 2343
179 Ga0207683_10005310 3300026121 Bacteria 11047
180 Ga0207698_10000053 3300026142 Bacteria 82772
181 Ga0207698_10082846 3300026142 Bacteria 2594
182 Ga0209813_10000005 3300027866 Bacteria 128895
183 Ga0268266_10012567 3300028379 Bacteria 7316
184 Ga0268265_10000001 3300028380 Bacteria 1230727
185 Ga0268265_10000361 3300028380 Bacteria 49182
186 Ga0268265_10000684 3300028380 Bacteria 33416
187 Ga0268264_10000101 3300028381 Bacteria 225109
188 Ga0268264_10000116 3300028381 Bacteria 198591
189 Ga0268264_10000228 3300028381 Bacteria 108722
190 Ga0268264_10006874 3300028381 Bacteria 9548
191 Ga0307515_10076491 3300028794 Bacteria 4439
192 Ga0265338_10144694 3300028800 Bacteria 1856
193 Ga0265332_10003457 3300031238 Bacteria 7611
194 Ga0307513_10053419 3300031456 Bacteria 4343
195 Ga0307509_10000576 3300031507 Bacteria 62888
196 Ga0307509_10003565 3300031507 Bacteria 23428
197 Ga0307509_10028838 3300031507 Bacteria 6168
198 Ga0307516_10040374 3300031730 Bacteria 4646
199 Ga0307412_10000374 3300031911 Bacteria 27876
200 Ga0307412_10172476 3300031911 Bacteria 1618
201 Ga0307414_10000144 3300032004 Bacteria 48442
202 Ga0307414_10133965 3300032004 Bacteria 1928
203 Ga0373936_0000016 3300035113 Bacteria 198547
204 Ga0373941_0007895 3300035115 Bacteria 2623
205 Ga0373961_0000110 3300035241 Bacteria 42581
206 Ga0395899_0006237 3300037312 Bacteria 9235
207 Ga0395900_0031794 3300037418 Bacteria 5424
208 Ga0237816_00139 3300039145 Bacteria 5671
209 Ga0436365_1383286 3300039437 Bacteria 2948
210 Ga0495627_000089 3300046453 Bacteria 110113
211 Ga0495627_000108 3300046453 Bacteria 102455
212 Ga0495638_0073580 3300046460 Bacteria 2085
213 Ga0495650_0002647 3300046471 Bacteria 13986
214 Ga0495610_0000615 3300046512 Bacteria 35218
215 Ga0495616_0000687 3300046513 Bacteria 25047
216 Ga0495632_0000001 3300046519 Bacteria 873295
217 Ga0495637_0000883 3300046520 Bacteria 19416
218 Ga0495643_0000006 3300046522 Bacteria 419524
219 Ga0495643_0112897 3300046522 Bacteria 1380
220 Ga0495663_0000002 3300046525 Bacteria 495384
221 Ga0495633_0000160 3300046558 Bacteria 88116
222 Ga0495633_0000276 3300046558 Bacteria 59784
223 Ga0495633_0038093 3300046558 Bacteria 2298
224 Ga0495633_0103163 3300046558 Bacteria 1323
225 Ga0495668_0005097 3300046616 Bacteria 9032
226 Ga0495671_0000008 3300046692 Bacteria 419524
227 Ga0495681_0000103 3300047470 Bacteria 75088
228 Ga0495681_0005494 3300047470 Bacteria 8475
229 Ga0495686_0041718 3300047472 Bacteria 2921
230 Ga0496108_0065057 3300048911 Bacteria 3073
231 Ga0496110_0217296 3300048913 Bacteria 1738
232 Ga0496113_0307639 3300048916 Bacteria 1269
233 Ga0496121_0066723 3300048924 Bacteria 2920
234 Ga0496122_0080342 3300048925 Bacteria 2274
235 Ga0496122_0134164 3300048925 Bacteria 1565
236 Ga0496123_0006776 3300048926 Bacteria 11011
237 Ga0496124_0014971 3300048927 Bacteria 7467
238 Ga0496125_0026793 3300048928 Bacteria 5238
239 Ga0496125_0089454 3300048928 Bacteria 2316
240 Ga0496125_0164036 3300048928 Bacteria 1504
241 Ga0501314_006011 3300049530 Bacteria 1047
242 Ga0501032_0008650 3300049569 Bacteria 7420
243 Ga0501034_0138354 3300049571 Bacteria 2415
244 Ga0501038_0158918 3300049574 Bacteria 1838
245 Ga0501043_0048797 3300049579 Bacteria 3327
246 Ga0501047_0001284 3300049581 Bacteria 24820
247 Ga0501070_0029455 3300049586 Bacteria 4602
248 Ga0501070_0045889 3300049586 Bacteria 3633
249 Ga0501223_000022 3300049663 Bacteria 65110
250 Ga0501223_000070 3300049663 Bacteria 31069
251 Ga0501224_000012 3300049664 Bacteria 92585
252 Ga0501249_000546 3300049679 Bacteria 9061
253 Ga0501225_0000019 3300049705 Bacteria 59374
254 Ga0501225_0000151 3300049705 Bacteria 21256
255 Ga0501225_0000872 3300049705 Bacteria 9370
256 Ga0501234_000414 3300049707 Bacteria 6343
257 Ga0501080_0157056 3300049742 Bacteria 2101
258 Ga0501226_000064 3300049853 Bacteria 35696
259 nmdc:mga03n38_14762_c1 3300050490 Bacteria 3002
260 nmdc:mga06z11_43_c1 3300050494 Bacteria 52632
261 nmdc:mga04h51_28_c1 3300050495 Bacteria 52617
262 Ga0500578_0070468 3300053086 Bacteria 2229
263 Ga0500643_000081 3300053087 Bacteria 101681
264 Ga0500643_002736 3300053087 Bacteria 8837
265 Ga0500566_0033060 3300053094 Bacteria 3015
266 Ga0500640_009468 3300053095 Bacteria 3893
267 Ga0500554_000713 3300053102 Bacteria 6733
268 Ga0500595_002587 3300053119 Bacteria 8836
269 Ga0500614_001977 3300053123 Bacteria 4689
270 Ga0500618_012317 3300053125 Bacteria 2241
271 Ga0500642_0077254 3300053130 Bacteria 1524
272 Ga0500559_0003782 3300053136 Bacteria 7348
273 Ga0500559_0012942 3300053136 Bacteria 3539
274 Ga0500564_128610 3300053138 Bacteria 1098
275 Ga0500585_037091 3300053144 Bacteria 1706
276 Ga0500603_000621 3300053150 Bacteria 8756
277 Ga0500624_000057 3300053157 Bacteria 71174
278 Ga0500624_000065 3300053157 Bacteria 63944
279 Ga0500627_0024822 3300053158 Bacteria 2457
280 Ga0500636_0029162 3300053177 Bacteria 3258
281 2643731310 2643221541 Bacteria 5498788
282 2644042362 2643221606 Bacteria 5588032
283 2644393996 2643221671 Bacteria 5496681
284 2778124483 2775507255 Bacteria 3945731
285 2809077761 2808606404 Bacteria 4652788
286 2809082531 2808606405 Bacteria 4586632
287 2880520020 2880518877 Bacteria 5012590
288 2919711511 2919709256 Bacteria 4318106
289 Ga0373949_0000037
290 SwRhRL2b_contig_3789888
291 JGI24736J21556_1000868
292 JGI24741J21665_1000154
293 JGI24740J21852_10001089
294 JGI24739J22299_10000294
295 JGI24735J21928_10002700
296 JGI24738J21930_10001697
297 JGI24749J21850_1000227
298 JGI24751J29686_10000366
299 Ga0065704_10004641
300 Ga0065707_10104580
301 Ga0065707_10153332
302 Ga0070658_10001688
303 Ga0070658_10272168
304 Ga0070690_100014251
305 Ga0070670_100001111
306 Ga0070670_100003440
307 Ga0070670_100006621
308 Ga0070670_100104092
309 Ga0068869_100133256
310 Ga0068869_100321082
311 Ga0070666_10000063
312 Ga0070666_10005988
313 Ga0070666_10117662
314 Ga0070661_100113228
315 Ga0070668_100000008
316 Ga0070668_100001336
317 Ga0070668_100019826
318 Ga0070669_100000042
319 Ga0070669_100000049
320 Ga0070669_100006880
321 Ga0070669_100238394
322 Ga0070671_100000002
323 Ga0070671_100000064
324 Ga0070688_100170938
325 Ga0070659_100072880
326 Ga0070667_100000003
327 Ga0070667_100000062
328 Ga0070667_100000098
329 Ga0070667_100008204
330 Ga0070705_100055875
331 Ga0070708_100145087
332 Ga0070663_100010847
333 Ga0070679_100130711
334 Ga0070684_100184741
335 Ga0070665_100005897
336 Ga0068855_100082148
337 Ga0068855_100122869
338 Ga0068857_100143386
339 Ga0068857_100148090
340 Ga0068854_100006158
341 Ga0068854_100076203
342 Ga0068856_100025029
343 Ga0068856_100030426
344 Ga0068856_100268591
345 Ga0068852_100000582
346 Ga0068859_100002706
347 Ga0068859_100019900
348 Ga0068859_100032031
349 Ga0068859_100309365
350 Ga0068864_100000767
351 Ga0068864_100003415
352 Ga0068864_100010911
353 Ga0068864_100206248
354 Ga0068861_100000148
355 Ga0068861_100001005
356 Ga0068861_100057469
357 Ga0068851_10030384
358 Ga0068863_100000054
359 Ga0068863_100009707
360 Ga0068863_100015872
361 Ga0068863_100017375
362 Ga0068858_100000588
363 Ga0068858_100008633
364 Ga0068860_100000045
365 Ga0068860_100000164
366 Ga0068860_100004315
367 Ga0068860_100018339
368 Ga0068862_100000001
369 Ga0068862_100000449
370 Ga0068862_100007780
371 Ga0068862_100295744
372 Ga0070717_10040030
373 Ga0075368_10001434
374 Ga0075363_100080036
375 Ga0075367_10000150
376 Ga0075430_100090390
377 Ga0075431_100040456
378 Ga0075429_100012017
379 Ga0097620_100002706
380 Ga0097620_100019900
381 Ga0097620_100032030
382 Ga0097620_100309353
383 Ga0105251_10028615
384 Ga0105245_10000081
385 Ga0105247_10011086
386 Ga0105248_10003130
387 Ga0105248_10057005
388 Ga0105237_10025779
389 Ga0105237_10327119
390 Ga0105238_10202323
391 Ga0105249_10006586
392 Ga0105249_10187344
393 Ga0105148_100037
394 Ga0105239_10225831
395 Ga0157374_10014444
396 Ga0157378_10065335
397 Ga0163162_10003776
398 Ga0163163_10022744
399 Ga0157380_10000117
400 Ga0157379_10011635
401 Ga0157376_10058195
402 Ga0163161_10151314
403 Ga0163161_10182468
404 Ga0213876_10033967
405 Ga0209147_101877
406 Ga0207697_10002057
407 Ga0207656_10002860
408 Ga0207710_10002965
409 Ga0207680_10000336
410 Ga0207680_10007736
411 Ga0207680_10063410
412 Ga0207680_10100457
413 Ga0207647_10006385
414 Ga0207705_10000004
415 Ga0207654_10022694
416 Ga0207657_10014805
417 Ga0207681_10000002
418 Ga0207681_10000005
419 Ga0207681_10013583
420 Ga0207681_10091130
421 Ga0207694_10003983
422 Ga0207694_10005568
423 Ga0207650_10000004
424 Ga0207650_10002404
425 Ga0207650_10011490
426 Ga0207650_10034910
427 Ga0207687_10001036
428 Ga0207644_10000002
429 Ga0207644_10000078
430 Ga0207644_10043872
431 Ga0207690_10117764
432 Ga0207670_10037351
433 Ga0207711_10004029
434 Ga0207689_10119584
435 Ga0207667_10114865
436 Ga0207712_10057676
437 Ga0207668_10000480
438 Ga0207668_10000924
439 Ga0207668_10001038
440 Ga0207668_10030180
441 Ga0207640_10024905
442 Ga0207640_10040985
443 Ga0207658_10000002
444 Ga0207658_10000039
445 Ga0207658_10000196
446 Ga0207658_10008924
447 Ga0207703_10000587
448 Ga0207639_10000387
449 Ga0207639_10003181
450 Ga0207678_10001685
451 Ga0207702_10017997
452 Ga0207702_10299685
453 Ga0207641_10000095
454 Ga0207641_10000583
455 Ga0207641_10005235
456 Ga0207641_10007060
457 Ga0207641_10009799
458 Ga0207641_10018698
459 Ga0207676_10000006
460 Ga0207676_10008084
461 Ga0207676_10115520
462 Ga0207674_10020967
463 Ga0207674_10280785
464 Ga0207675_100000355
465 Ga0207675_100003637
466 Ga0207675_100134694
467 Ga0207683_10005310
468 Ga0207698_10000053
469 Ga0207698_10082846
470 Ga0209813_10000005
471 Ga0268266_10012567
472 Ga0268265_10000001
473 Ga0268265_10000361
474 Ga0268265_10000684
475 Ga0268264_10000101
476 Ga0268264_10000116
477 Ga0268264_10000228
478 Ga0268264_10006874
479 Ga0307515_10076491
480 Ga0265338_10144694
481 Ga0265332_10003457
482 Ga0307513_10053419
483 Ga0307509_10000576
484 Ga0307509_10003565
485 Ga0307509_10028838
486 Ga0307516_10040374
487 Ga0307412_10000374
488 Ga0307412_10172476
489 Ga0307414_10000144
490 Ga0307414_10133965
491 Ga0373936_0000016
492 Ga0373941_0007895
493 Ga0373961_0000110
494 Ga0395899_0006237
495 Ga0395900_0031794
496 Ga0237816_00139
497 Ga0436365_1383286
498 Ga0495627_000089
499 Ga0495627_000108
500 Ga0495638_0073580
501 Ga0495650_0002647
502 Ga0495610_0000615
503 Ga0495616_0000687
504 Ga0495632_0000001
505 Ga0495637_0000883
506 Ga0495643_0000006
507 Ga0495643_0112897
508 Ga0495663_0000002
509 Ga0495633_0000160
510 Ga0495633_0000276
511 Ga0495633_0038093
512 Ga0495633_0103163
513 Ga0495668_0005097
514 Ga0495671_0000008
515 Ga0495681_0000103
516 Ga0495681_0005494
517 Ga0495686_0041718
518 Ga0496108_0065057
519 Ga0496110_0217296
520 Ga0496113_0307639
521 Ga0496121_0066723
522 Ga0496122_0080342
523 Ga0496122_0134164
524 Ga0496123_0006776
525 Ga0496124_0014971
526 Ga0496125_0026793
527 Ga0496125_0089454
528 Ga0496125_0164036
529 Ga0501314_006011
530 Ga0501032_0008650
531 Ga0501034_0138354
532 Ga0501038_0158918
533 Ga0501043_0048797
534 Ga0501047_0001284
535 Ga0501070_0029455
536 Ga0501070_0045889
537 Ga0501223_000022
538 Ga0501223_000070
539 Ga0501224_000012
540 Ga0501249_000546
541 Ga0501225_0000019
542 Ga0501225_0000151
543 Ga0501225_0000872
544 Ga0501234_000414
545 Ga0501080_0157056
546 Ga0501226_000064
547 nmdc:mga03n38_14762_c1
548 nmdc:mga06z11_43_c1
549 nmdc:mga04h51_28_c1
550 Ga0500578_0070468
551 Ga0500643_000081
552 Ga0500643_002736
553 Ga0500566_0033060
554 Ga0500640_009468
555 Ga0500554_000713
556 Ga0500595_002587
557 Ga0500614_001977
558 Ga0500618_012317
559 Ga0500642_0077254
560 Ga0500559_0003782
561 Ga0500559_0012942
562 Ga0500564_128610
563 Ga0500585_037091
564 Ga0500603_000621
565 Ga0500624_000057
566 Ga0500624_000065
567 Ga0500627_0024822
568 Ga0500636_0029162
569 2643731310
570 2644042362
571 2644393996
572 2778124483
573 2809077761
574 2809082531
575 2880520020
576 2919711511

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00389

2-Hacid_dh

D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

29

354

0.99

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

220

322

0.96

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

107

197

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dbq-assembly1.cif.gz_A crystal structure of glyoxylate reductase (ph0597) from pyrococcus horikoshii ot3, complexed with nadp (i41) 0.9588 9 327
6bii-assembly1.cif.gz_B crystal structure of pyrococcus yayanosii glyoxylate hydroxypyruvate reductase in complex with nadp and malonate (re-refinement of 5aow) 0.9556 9 327
5aov-assembly1.cif.gz_A-2 ternary crystal structure of pyrococcus furiosus glyoxylate hydroxypyruvate reductase in presence of glyoxylate 0.9544 9 327
6rj6-assembly1.cif.gz_B crystal structure of phgdh in complex with bi-4924 0.9526 104 317
7va1-assembly1.cif.gz_B crystal structure of human 3-phosphoglycerate dehydrogenase in complex with gdd-04-35 0.9481 111 301
ID Description Score Start End Superfamily
af_Q2FVW4_141_284_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9862 150 294 3.40.50.720
1gdhB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.982 109 292 3.40.50.720
af_Q2FVW4_100_283_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9816 109 294 3.40.50.720
1gdhB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9767 109 292 3.40.50.720
af_Q2FVW4_100_283_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9763 109 294 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A0N0RCG7-F1-model_v4 deleted 0.995 6 332
AF-A0A212K9H0-F1-model_v4 Glyoxylate reductase (EC 1.1.1.26) 0.9929 9 328 GO:0005829
GO:0016618
GO:0030267
GO:0047964
GO:0051287
AF-Q0FD29-F1-model_v4 2-hydroxyacid dehydrogenase (EC 1.1.1.272) 0.9926 11 328 GO:0005829
GO:0016618
GO:0030267
GO:0050578
GO:0051287
AF-A0A2U0UY67-F1-model_v4 deleted 0.9925 1 332
AF-A0A2S6TMS5-F1-model_v4 Glycerate dehydrogenase (EC 1.1.1.29) 0.9918 9 328 GO:0005829
GO:0008465
GO:0030267
GO:0051287

Map