F389101

General Info

Members Datasets Scaffolds Average Seq Length
289 209 277 328

Family's Representative Sequence

Representative Sequence 3300006173|Ga0070716_100066743|Ga0070716_1000667432
Length 380
Sequence MMGKGRNRVAHIDCHAREGGTAEPVEWRLRVFFQSAGCLRAANNPEKTRRITLLCSKPLTRRDVLKASAAALAFAPLPVSAQAVYPARPVRVVIPYPPAGGADTVGRLLFQKLGEMWGAQFVIDNRGGAGGTIAAAAVAKAERDGYTLMFDATAHSVNPSLYPNLSYDTVKDFQPIFLAALISNLLVVNKSVEARSVADVIALAKATPGGLDWASSGNGTVQHLALEMFKYRAGIKLNHIPYRGGGPALNDVIAGQVKFYFSNAAASVGHVQSGTIKCIAHTGKGRLAALPDVAAVAETLPGFEAYEWQGLFAPAGTPAPIVDKLNAGMNAVLRQPDMIERLKQLNVESRENTPAEFRAFVVAEIEKWSGVVREANIKLG

Samples

Sample ID Description Type Environment
1 2855730933 Achromobacter sp. HZ28 Isolate Nodule
2 2855767633 Achromobacter sp. HZ34 Isolate Nodule
3 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
4 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
5 2858950400 Achromobacter sp. K91 Isolate Unclassified
6 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
7 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
8 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
9 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
10 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
12 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
24 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
28 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
29 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
30 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
31 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
32 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
33 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
34 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
35 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
42 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
46 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
49 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
50 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
51 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
52 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
53 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
54 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
55 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
56 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
57 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
58 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
59 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
60 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
61 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
62 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
63 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
64 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
65 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
66 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
67 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
68 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
69 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
70 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
71 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
72 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
73 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
74 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
75 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
76 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
77 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
78 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
79 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
80 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
81 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
82 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
83 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
84 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
85 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
86 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
87 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
88 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
89 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
90 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
123 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
124 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
127 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
128 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
129 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
130 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
131 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
132 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
133 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
134 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
135 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
136 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
137 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
138 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
139 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
140 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
141 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
142 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
143 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
144 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
145 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
146 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
147 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
148 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
149 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
150 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
151 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
152 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
153 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
154 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
155 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
156 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
157 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
158 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
159 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
160 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
161 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
162 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
163 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
164 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
165 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
166 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
167 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
168 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
169 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
170 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
171 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
172 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
173 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
174 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
175 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
176 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
177 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
178 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
179 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
180 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
181 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
182 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
183 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
184 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
185 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
186 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
187 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
188 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
189 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
190 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
191 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
192 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
193 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
194 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
195 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
196 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
197 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
198 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
199 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
200 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
201 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
202 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
203 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
204 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
205 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
206 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
207 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
208 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
209 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.85
Metatranscriptomes 0
Isolates 4.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.88
Nodule 0.69
Rhizoplane 10.03
Rhizosphere 70.93
Stem 0
Stem Tuber 0
Unclassified 3.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24034J26672_10007224 3300002239 Bacteria 1611
2 JGI25406J46586_10000562 3300003203 Bacteria 17537
3 JGI25153J46596_10008863 3300003215 Bacteria 4750
4 Ga0055540_1003894 3300003792 Bacteria 7005
5 Ga0055531_10001138 3300003794 Bacteria 20582
6 Ga0070683_100104767 3300005329 Bacteria 2666
7 Ga0070670_100056167 3300005331 Bacteria 3379
8 Ga0070670_100080893 3300005331 Bacteria 2792
9 Ga0068869_100056844 3300005334 Bacteria 2854
10 Ga0070666_10076501 3300005335 Bacteria 2283
11 Ga0070689_100023917 3300005340 Bacteria 4580
12 Ga0070668_100046407 3300005347 Bacteria 3336
13 Ga0070668_100088074 3300005347 Bacteria 2443
14 Ga0070669_100072077 3300005353 Bacteria 2557
15 Ga0070669_100092181 3300005353 Bacteria 2274
16 Ga0070675_100049017 3300005354 Bacteria 3465
17 Ga0070675_100101488 3300005354 Bacteria 2424
18 Ga0070671_100201438 3300005355 Bacteria 1688
19 Ga0070674_100019783 3300005356 Bacteria 4284
20 Ga0070674_100196696 3300005356 Bacteria 1554
21 Ga0070688_100010353 3300005365 Bacteria 5139
22 Ga0070659_100189953 3300005366 Bacteria 1688
23 Ga0070667_100029245 3300005367 Bacteria 4590
24 Ga0070709_10065916 3300005434 Bacteria 2320
25 Ga0070713_100248825 3300005436 Bacteria 1621
26 Ga0070710_10021780 3300005437 Bacteria 3346
27 Ga0070711_100058572 3300005439 Bacteria 2671
28 Ga0070711_100105801 3300005439 Bacteria 2056
29 Ga0070700_100018962 3300005441 Bacteria 3964
30 Ga0070663_100033805 3300005455 Bacteria 3535
31 Ga0070678_100193368 3300005456 Bacteria 1674
32 Ga0070662_100023421 3300005457 Bacteria 4241
33 Ga0068867_100023389 3300005459 Bacteria 4423
34 Ga0070684_100076764 3300005535 Bacteria 2949
35 Ga0070684_100278971 3300005535 Bacteria 1531
36 Ga0070672_100021128 3300005543 Bacteria 4759
37 Ga0070672_100330904 3300005543 Bacteria 1296
38 Ga0070665_100486901 3300005548 Bacteria 1244
39 Ga0070664_100116581 3300005564 Bacteria 2335
40 Ga0068857_100162966 3300005577 Bacteria 2024
41 Ga0068854_100038060 3300005578 Bacteria 3381
42 Ga0070702_100022254 3300005615 Bacteria 3347
43 Ga0068852_100097042 3300005616 Bacteria 2650
44 Ga0068859_100463136 3300005617 Bacteria 1363
45 Ga0068864_100004578 3300005618 Bacteria 11352
46 Ga0068866_10012942 3300005718 Bacteria 3646
47 Ga0068861_100030254 3300005719 Bacteria 3966
48 Ga0068851_10053280 3300005834 Bacteria 2059
49 Ga0068870_10004900 3300005840 Bacteria 5793
50 Ga0068863_100016140 3300005841 Bacteria 7164
51 Ga0068858_100029477 3300005842 Bacteria 5096
52 Ga0068862_100018457 3300005844 Bacteria 5809
53 Ga0081455_10121480 3300005937 Bacteria 2058
54 Ga0081538_10033642 3300005981 Bacteria 3407
55 Ga0081538_10067197 3300005981 Bacteria 2003
56 Ga0081540_1008029 3300005983 Bacteria 7425
57 Ga0081539_10000118 3300005985 Bacteria 184562
58 Ga0081539_10001269 3300005985 Bacteria 44534
59 Ga0081539_10003824 3300005985 Bacteria 17697
60 Ga0081539_10107675 3300005985 Bacteria 1409
61 Ga0070717_10258094 3300006028 Bacteria 1541
62 Ga0075365_10030494 3300006038 Bacteria 3454
63 Ga0075368_10018377 3300006042 Bacteria 2627
64 Ga0075368_10067390 3300006042 Bacteria 1441
65 Ga0075363_100002510 3300006048 Bacteria 7521
66 Ga0075363_100002638 3300006048 Bacteria 7394
67 Ga0075363_100097568 3300006048 Bacteria 1624
68 Ga0075364_10016103 3300006051 Bacteria 4647
69 Ga0075364_10045200 3300006051 Bacteria 2866
70 Ga0075364_10110595 3300006051 Bacteria 1833
71 Ga0070716_100066743 3300006173 Bacteria 2099
72 Ga0070712_100037976 3300006175 Bacteria 3287
73 Ga0075362_10017333 3300006177 Bacteria 2966
74 Ga0075367_10004819 3300006178 Bacteria 6644
75 Ga0075367_10029258 3300006178 Bacteria 3150
76 Ga0075367_10176915 3300006178 Bacteria 1330
77 Ga0075366_10128437 3300006195 Bacteria 1529
78 Ga0075370_10170858 3300006353 Bacteria 1278
79 Ga0068871_100045638 3300006358 Bacteria 3527
80 Ga0075428_100001027 3300006844 Bacteria 29563
81 Ga0075428_100065854 3300006844 Bacteria 3967
82 Ga0075428_100153130 3300006844 Bacteria 2505
83 Ga0075428_100153782 3300006844 Bacteria 2499
84 Ga0075430_100003055 3300006846 Bacteria 13995
85 Ga0075430_100070816 3300006846 Bacteria 2925
86 Ga0075431_100000017 3300006847 Bacteria 84171
87 Ga0075431_100020722 3300006847 Bacteria 6718
88 Ga0075431_100049090 3300006847 Bacteria 4353
89 Ga0075431_100147522 3300006847 Bacteria 2424
90 Ga0075434_100083990 3300006871 Bacteria 3183
91 Ga0075434_100308474 3300006871 Bacteria 1603
92 Ga0075429_100174098 3300006880 Bacteria 1885
93 Ga0068865_100083990 3300006881 Bacteria 2293
94 Ga0097620_100463135 3300006931 Bacteria 1363
95 Ga0099794_10016066 3300007265 Bacteria 3313
96 Ga0105250_10040112 3300009092 Bacteria 1878
97 Ga0111539_10203339 3300009094 Bacteria 2309
98 Ga0114129_10000025 3300009147 Bacteria 116480
99 Ga0114129_10074451 3300009147 Bacteria 4730
100 Ga0114129_10793559 3300009147 Bacteria 1209
101 Ga0105243_10225318 3300009148 Bacteria 1660
102 Ga0105238_10141815 3300009551 Bacteria 2379
103 Ga0105249_10119654 3300009553 Bacteria 2501
104 Ga0105239_10438373 3300010375 Bacteria 1481
105 Ga0105246_10033750 3300011119 Bacteria 3404
106 Ga0157378_10029468 3300013297 Bacteria 4845
107 Ga0163162_10028272 3300013306 Bacteria 5547
108 Ga0157375_10131709 3300013308 Bacteria 2620
109 Ga0163161_10080999 3300017792 Bacteria 2390
110 Ga0209758_1000772 3300025297 Bacteria 45993
111 Ga0209051_1000367 3300025303 Bacteria 65677
112 Ga0209257_1000012 3300025304 Bacteria 1111138
113 Ga0207688_10001105 3300025901 Bacteria 13845
114 Ga0207643_10000387 3300025908 Bacteria 29359
115 Ga0207693_10077495 3300025915 Unclassified 2603
116 Ga0207693_10186465 3300025915 Bacteria 1633
117 Ga0207663_10038417 3300025916 Bacteria 2894
118 Ga0207662_10010233 3300025918 Bacteria 5173
119 Ga0207657_10034973 3300025919 Bacteria 4509
120 Ga0207650_10025231 3300025925 Bacteria 4234
121 Ga0207659_10019416 3300025926 Bacteria 4474
122 Ga0207659_10079199 3300025926 Bacteria 2424
123 Ga0207700_10329909 3300025928 Bacteria 1324
124 Ga0207644_10331213 3300025931 Bacteria 1233
125 Ga0207686_10129691 3300025934 Bacteria 1728
126 Ga0207709_10281900 3300025935 Bacteria 1228
127 Ga0207670_10021293 3300025936 Bacteria 3998
128 Ga0207669_10030411 3300025937 Bacteria 3000
129 Ga0207704_10051789 3300025938 Bacteria 2485
130 Ga0207665_10001717 3300025939 Bacteria 14724
131 Ga0207691_10028372 3300025940 Bacteria 5242
132 Ga0207711_10167058 3300025941 Bacteria 1995
133 Ga0207689_10002173 3300025942 Bacteria 18432
134 Ga0207712_10165119 3300025961 Bacteria 1725
135 Ga0207668_10025392 3300025972 Bacteria 3834
136 Ga0207668_10095016 3300025972 Bacteria 2199
137 Ga0207658_10069679 3300025986 Bacteria 2658
138 Ga0207658_10153327 3300025986 Bacteria 1880
139 Ga0207639_10063939 3300026041 Bacteria 2851
140 Ga0207678_10103214 3300026067 Bacteria 2434
141 Ga0207708_10001620 3300026075 Bacteria 16770
142 Ga0207708_10069925 3300026075 Bacteria 2688
143 Ga0207641_10480228 3300026088 Bacteria 1204
144 Ga0207648_10006315 3300026089 Bacteria 11787
145 Ga0207675_100038331 3300026118 Bacteria 4472
146 Ga0207683_10024882 3300026121 Bacteria 5160
147 Ga0207698_10101366 3300026142 Bacteria 2387
148 Ga0209813_10008429 3300027866 Bacteria 2604
149 Ga0209813_10060546 3300027866 Bacteria 1207
150 Ga0207428_10001198 3300027907 Bacteria 27809
151 Ga0268265_10031224 3300028380 Bacteria 3845
152 Ga0268264_10031171 3300028381 Bacteria 4371
153 Ga0265330_10007715 3300031235 Bacteria 5226
154 Ga0265340_10085886 3300031247 Bacteria 1476
155 Ga0265316_10021601 3300031344 Bacteria 5447
156 Ga0265313_10007774 3300031595 Bacteria 7247
157 Ga0265342_10008709 3300031712 Bacteria 7239
158 Ga0373944_0020559 3300035089 Bacteria 1903
159 Ga0373945_0021922 3300035116 Bacteria 2198
160 Ga0373943_0016308 3300035170 Bacteria 3386
161 Ga0373943_0046498 3300035170 Bacteria 2118
162 Ga0373946_0077998 3300035171 Bacteria 1444
163 Ga0373946_0170305 3300035171 Bacteria 1027
164 Ga0373935_0019265 3300035692 Bacteria 4162
165 Ga0373935_0103963 3300035692 Bacteria 1876
166 Ga0373947_0002493 3300035725 Bacteria 11068
167 Ga0395899_0002888 3300037312 Bacteria 13804
168 Ga0395900_0014210 3300037418 Bacteria 8127
169 Ga0395900_0118497 3300037418 Bacteria 2717
170 Ga0395898_0108367 3300037466 Bacteria 2663
171 Ga0395905_0209078 3300037471 Bacteria 1828
172 Ga0395901_0001635 3300038443 Bacteria 23170
173 Ga0436365_1440372 3300039437 Bacteria 1374
174 Ga0439436_0000097 3300041404 Bacteria 20620
175 Ga0439453_0003013 3300041408 Bacteria 2381
176 Ga0439460_0003162 3300042461 Bacteria 3977
177 Ga0453683_0013299 3300044673 Bacteria 5378
178 Ga0451576_0061064 3300045051 Bacteria 3931
179 Ga0495629_0063160 3300046459 Bacteria 2586
180 Ga0495580_0165111 3300046472 Bacteria 1532
181 Ga0495639_0010511 3300046475 Bacteria 3986
182 Ga0495607_0002534 3300046501 Bacteria 14780
183 Ga0495618_0127134 3300046514 Bacteria 1632
184 Ga0495628_0386072 3300046516 Bacteria 1025
185 Ga0495663_0076778 3300046525 Unclassified 1071
186 Ga0495598_0008033 3300046537 Bacteria 2444
187 Ga0495621_0048225 3300046539 Bacteria 1516
188 Ga0495633_0137623 3300046558 Bacteria 1129
189 Ga0495659_0066767 3300046664 Bacteria 1340
190 Ga0495661_0097190 3300046665 Bacteria 1664
191 Ga0495647_0011834 3300046681 Bacteria 2994
192 Ga0495658_0065381 3300046683 Bacteria 2098
193 Ga0495613_0161794 3300046689 Bacteria 1592
194 Ga0495671_0049501 3300046692 Bacteria 2095
195 Ga0495672_0056725 3300047320 Bacteria 2277
196 Ga0495680_0264136 3300047322 Bacteria 1217
197 Ga0495687_022101 3300047443 Bacteria 3060
198 Ga0496100_0050386 3300048903 Bacteria 2698
199 Ga0496101_0001573 3300048904 Bacteria 13684
200 Ga0496101_0111091 3300048904 Bacteria 2063
201 Ga0496102_0014548 3300048905 Bacteria 6837
202 Ga0496102_0074369 3300048905 Bacteria 3123
203 Ga0496102_0089056 3300048905 Bacteria 2854
204 Ga0496103_0029775 3300048906 Bacteria 3318
205 Ga0496104_0001393 3300048907 Bacteria 20913
206 Ga0496104_0008002 3300048907 Bacteria 9374
207 Ga0496104_0038696 3300048907 Bacteria 4463
208 Ga0496104_0102546 3300048907 Bacteria 2740
209 Ga0496106_0091696 3300048909 Bacteria 2346
210 Ga0496106_0106719 3300048909 Bacteria 2177
211 Ga0496106_0133021 3300048909 Bacteria 1951
212 Ga0496107_0004013 3300048910 Bacteria 9911
213 Ga0496108_0000626 3300048911 Bacteria 27644
214 Ga0496108_0017276 3300048911 Bacteria 5901
215 Ga0496109_0017077 3300048912 Bacteria 6350
216 Ga0496109_0070094 3300048912 Bacteria 3216
217 Ga0496110_0029883 3300048913 Bacteria 4695
218 Ga0496110_0135692 3300048913 Bacteria 2223
219 Ga0496110_0142561 3300048913 Bacteria 2166
220 Ga0496111_0009257 3300048914 Bacteria 6565
221 Ga0496111_0011245 3300048914 Bacteria 6023
222 Ga0496112_0003529 3300048915 Bacteria 12970
223 Ga0496112_0009904 3300048915 Bacteria 8618
224 Ga0496113_0017106 3300048916 Bacteria 5026
225 Ga0496115_0005841 3300048918 Bacteria 8965
226 Ga0496115_0174498 3300048918 Bacteria 1777
227 Ga0496122_0000199 3300048925 Bacteria 133898
228 Ga0496123_0000102 3300048926 Bacteria 169327
229 Ga0501072_0000405 3300049588 Bacteria 30860
230 Ga0501072_0080577 3300049588 Bacteria 2580
231 Ga0501075_0029756 3300049591 Bacteria 4040
232 Ga0501079_0356091 3300049741 Bacteria 1147
233 Ga0501083_0045039 3300049744 Bacteria 2985
234 Ga0501044_0122324 3300049823 Bacteria 2602
235 nmdc:mga03683_85301_c1 3300050489 Bacteria 1369
236 nmdc:mga03n38_16971_c1 3300050490 Bacteria 2843
237 nmdc:mga00v17_1897_c1 3300050491 Bacteria 10821
238 nmdc:mga00v17_3309_c1 3300050491 Bacteria 8307
239 nmdc:mga00v17_68019_c1 3300050491 Bacteria 2202
240 nmdc:mga0yw44_105815_c1 3300050492 Bacteria 1798
241 nmdc:mga0yw44_21655_c1 3300050492 Bacteria 3591
242 nmdc:mga0k408_18271_c1 3300050493 Bacteria 3913
243 nmdc:mga0k408_20443_c1 3300050493 Bacteria 3709
244 nmdc:mga0k408_7211_c1 3300050493 Bacteria 5941
245 nmdc:mga06z11_18118_c1 3300050494 Bacteria 3210
246 nmdc:mga06z11_25470_c1 3300050494 Bacteria 2804
247 nmdc:mga06z11_40587_c1 3300050494 Bacteria 2323
248 nmdc:mga06z11_90609_c1 3300050494 Bacteria 1659
249 nmdc:mga04h51_3739_c1 3300050495 Bacteria 3728
250 nmdc:mga04h51_72410_c1 3300050495 Bacteria 1206
251 nmdc:mga07m45_132577_c1 3300050496 Bacteria 1442
252 nmdc:mga05p37_33783_c1 3300050507 Bacteria 6265
253 nmdc:mga05p37_490345_c1 3300050507 Bacteria 1413
254 nmdc:mga05p37_5080_c1 3300050507 Bacteria 15430
255 nmdc:mga05p37_95_c1 3300050507 Bacteria 79379
256 nmdc:mga09592_1569_c1 3300050508 Bacteria 18390
257 nmdc:mga0qj67_51118_c1 3300050509 Bacteria 3267
258 nmdc:mga06r32_114_c1 3300050510 Bacteria 57934
259 nmdc:mga06r32_126684_c1 3300050510 Bacteria 2523
260 nmdc:mga06r32_52475_c1 3300050510 Bacteria 3905
261 nmdc:mga06r32_74874_c1 3300050510 Bacteria 3283
262 nmdc:mga08y16_123553_c1 3300050511 Bacteria 2693
263 nmdc:mga08y16_279590_c1 3300050511 Bacteria 1722
264 nmdc:mga08y16_303425_c1 3300050511 Bacteria 1645
265 nmdc:mga08y16_48_c1 3300050511 Bacteria 111306
266 nmdc:mga0n895_161963_c1 3300050512 Bacteria 2269
267 nmdc:mga0n895_57190_c1 3300050512 Bacteria 3844
268 nmdc:mga0sz30_30408_c1 3300050516 Bacteria 2231
269 Ga0495655_0037324 3300053083 Bacteria 1219
270 Ga0495655_0042732 3300053083 Bacteria 1165
271 Ga0500646_0018520 3300053090 Bacteria 1835
272 Ga0500618_023757 3300053125 Bacteria 1481
273 Ga0501084_0299473 3300054114 Bacteria 1358
274 Ga0501082_0102101 3300060353 Bacteria 2481
275 Ga0501082_0223952 3300060353 Bacteria 1637
276 Ga0530510_0124958 3300061734 Bacteria 1891
277 Ga0530510_0236222 3300061734 Bacteria 1360

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050489 nmdc:mga03683_85301_c1 nmdc:mga03683_85301_c1_57_884 261
2 3300050494 nmdc:mga06z11_25470_c1 nmdc:mga06z11_25470_c1_1224_2051 261
3 3300050495 nmdc:mga04h51_72410_c1 nmdc:mga04h51_72410_c1_217_1044 261
4 3300035171 Ga0373946_0170305 Ga0373946_0170305_66_1007 300
5 3300048903 Ga0496100_0050386 Ga0496100_0050386_405_1427 301
6 3300050491 nmdc:mga00v17_3309_c1 nmdc:mga00v17_3309_c1_1814_2935 301
7 3300005543 Ga0070672_100330904 Ga0070672_1003309042 303
8 3300005985 Ga0081539_10003824 Ga0081539_100038246 303
9 3300006051 Ga0075364_10045200 Ga0075364_100452002 303
10 3300005985 Ga0081539_10001269 Ga0081539_1000126933 304
11 3300050511 nmdc:mga08y16_303425_c1 nmdc:mga08y16_303425_c1_537_1544 305
12 3300005437 Ga0070710_10021780 Ga0070710_100217803 306
13 3300046516 Ga0495628_0386072 Ga0495628_0386072_20_949 309
14 3300050507 nmdc:mga05p37_490345_c1 nmdc:mga05p37_490345_c1_270_1226 309
15 iso_pu_bacteria 2883577096 2883577423 310
16 iso_pu_bacteria 2929199973 2929204917 310
17 iso_pu_bacteria 8055909800 8055914053 310
18 3300005329 Ga0070683_100104767 Ga0070683_1001047673 311
19 3300006042 Ga0075368_10067390 Ga0075368_100673901 311
20 3300006048 Ga0075363_100097568 Ga0075363_1000975682 311
21 3300006178 Ga0075367_10004819 Ga0075367_100048191 311
22 3300027866 Ga0209813_10060546 Ga0209813_100605461 311
23 3300005353 Ga0070669_100072077 Ga0070669_1000720773 312
24 3300035116 Ga0373945_0021922 Ga0373945_0021922_622_1599 312
25 3300035170 Ga0373943_0016308 Ga0373943_0016308_248_1225 312
26 3300035692 Ga0373935_0019265 Ga0373935_0019265_977_1954 312
27 3300035725 Ga0373947_0002493 Ga0373947_0002493_5421_6398 312
28 3300046525 Ga0495663_0076778 Ga0495663_0076778_98_1036 312
29 3300048925 Ga0496122_0000199 Ga0496122_0000199_28472_29449 312
30 3300048926 Ga0496123_0000102 Ga0496123_0000102_62668_63645 312
31 3300053090 Ga0500646_0018520 Ga0500646_0018520_497_1474 312
32 iso_pu_bacteria 2857537821 2857540938 312
33 iso_pu_bacteria 2858950400 2858951619 312
34 iso_pu_bacteria 2894772417 2894773584 312
35 3300053083 Ga0495655_0037324 Ga0495655_0037324_238_1185 313
36 3300005331 Ga0070670_100080893 Ga0070670_1000808932 314
37 3300005347 Ga0070668_100046407 Ga0070668_1000464073 314
38 3300005353 Ga0070669_100092181 Ga0070669_1000921812 314
39 3300005354 Ga0070675_100101488 Ga0070675_1001014882 314
40 3300005356 Ga0070674_100196696 Ga0070674_1001966962 314
41 3300005456 Ga0070678_100193368 Ga0070678_1001933682 314
42 3300025926 Ga0207659_10079199 Ga0207659_100791992 314
43 3300025972 Ga0207668_10025392 Ga0207668_100253923 314
44 3300025986 Ga0207658_10153327 Ga0207658_101533272 314
45 3300049823 Ga0501044_0122324 Ga0501044_0122324_1051_2040 314
46 3300025931 Ga0207644_10331213 Ga0207644_103312132 316
47 3300048907 Ga0496104_0001393 Ga0496104_0001393_5646_6596 316
48 3300050493 nmdc:mga0k408_7211_c1 nmdc:mga0k408_7211_c1_832_1788 316
49 3300050494 nmdc:mga06z11_18118_c1 nmdc:mga06z11_18118_c1_1623_2579 316
50 iso_pu_bacteria 2894772417 2894775312 316
51 iso_pu_bacteria 2929199973 2929202966 316
52 iso_pu_bacteria 8055909800 8055911953 316
53 3300031235 Ga0265330_10007715 Ga0265330_100077152 317
54 3300026075 Ga0207708_10069925 Ga0207708_100699253 318
55 3300041404 Ga0439436_0000097 Ga0439436_0000097_13774_14751 318
56 3300046459 Ga0495629_0063160 Ga0495629_0063160_1592_2548 318
57 3300046514 Ga0495618_0127134 Ga0495618_0127134_641_1597 318
58 3300048912 Ga0496109_0017077 Ga0496109_0017077_4312_5268 318
59 3300049588 Ga0501072_0080577 Ga0501072_0080577_1248_2216 318
60 3300049591 Ga0501075_0029756 Ga0501075_0029756_2683_3651 318
61 3300050508 nmdc:mga09592_1569_c1 nmdc:mga09592_1569_c1_8245_9213 318
62 3300050511 nmdc:mga08y16_123553_c1 nmdc:mga08y16_123553_c1_371_1573 318
63 3300050511 nmdc:mga08y16_48_c1 nmdc:mga08y16_48_c1_96522_97490 318
64 3300053125 Ga0500618_023757 Ga0500618_023757_423_1400 318
65 3300054114 Ga0501084_0299473 Ga0501084_0299473_342_1310 318
66 3300060353 Ga0501082_0102101 Ga0501082_0102101_1086_2054 318
67 3300061734 Ga0530510_0236222 Ga0530510_0236222_258_1226 318
68 3300009094 Ga0111539_10203339 Ga0111539_102033392 319
69 3300047320 Ga0495672_0056725 Ga0495672_0056725_233_1192 319
70 3300048905 Ga0496102_0089056 Ga0496102_0089056_257_1216 319
71 3300048907 Ga0496104_0102546 Ga0496104_0102546_189_1148 319
72 3300048909 Ga0496106_0091696 Ga0496106_0091696_980_1939 319
73 3300048911 Ga0496108_0000626 Ga0496108_0000626_20711_21670 319
74 3300048913 Ga0496110_0029883 Ga0496110_0029883_1256_2215 319
75 3300048914 Ga0496111_0009257 Ga0496111_0009257_2250_3209 319
76 3300048915 Ga0496112_0003529 Ga0496112_0003529_145_1104 319
77 3300048916 Ga0496113_0017106 Ga0496113_0017106_1708_2667 319
78 3300050507 nmdc:mga05p37_33783_c1 nmdc:mga05p37_33783_c1_3298_4257 319
79 3300050511 nmdc:mga08y16_279590_c1 nmdc:mga08y16_279590_c1_234_1193 319
80 3300006846 Ga0075430_100003055 Ga0075430_1000030555 320
81 3300006847 Ga0075431_100020722 Ga0075431_1000207224 320
82 3300006880 Ga0075429_100174098 Ga0075429_1001740982 320
83 3300037312 Ga0395899_0002888 Ga0395899_0002888_8194_9168 320
84 3300037418 Ga0395900_0014210 Ga0395900_0014210_1440_2414 320
85 3300037466 Ga0395898_0108367 Ga0395898_0108367_1440_2414 320
86 3300038443 Ga0395901_0001635 Ga0395901_0001635_20629_21603 320
87 3300047443 Ga0495687_022101 Ga0495687_022101_1732_2712 320
88 3300050490 nmdc:mga03n38_16971_c1 nmdc:mga03n38_16971_c1_1231_2208 320
89 3300050491 nmdc:mga00v17_68019_c1 nmdc:mga00v17_68019_c1_27_1004 320
90 3300050492 nmdc:mga0yw44_105815_c1 nmdc:mga0yw44_105815_c1_795_1772 320
91 3300050493 nmdc:mga0k408_18271_c1 nmdc:mga0k408_18271_c1_2910_3887 320
92 3300050495 nmdc:mga04h51_3739_c1 nmdc:mga04h51_3739_c1_2289_3266 320
93 3300050496 nmdc:mga07m45_132577_c1 nmdc:mga07m45_132577_c1_67_1044 320
94 3300050510 nmdc:mga06r32_126684_c1 nmdc:mga06r32_126684_c1_65_1057 320
95 3300050516 nmdc:mga0sz30_30408_c1 nmdc:mga0sz30_30408_c1_858_1835 320
96 3300003203 JGI25406J46586_10000562 JGI25406J46586_100005625 321
97 3300005985 Ga0081539_10000118 Ga0081539_10000118139 321
98 3300006042 Ga0075368_10018377 Ga0075368_100183773 321
99 3300006048 Ga0075363_100002638 Ga0075363_1000026386 321
100 3300006177 Ga0075362_10017333 Ga0075362_100173332 321
101 3300006195 Ga0075366_10128437 Ga0075366_101284371 321
102 3300027866 Ga0209813_10008429 Ga0209813_100084292 321
103 3300041408 Ga0439453_0003013 Ga0439453_0003013_1244_2221 322
104 3300042461 Ga0439460_0003162 Ga0439460_0003162_1225_2202 322
105 iso_pu_bacteria 2855730933 2855736078 322
106 iso_pu_bacteria 2855767633 2855773015 322
107 iso_pu_bacteria 2857576091 2857579925 322
108 3300003792 Ga0055540_1003894 Ga0055540_10038942 323
109 3300003794 Ga0055531_10001138 Ga0055531_1000113810 323
110 3300005439 Ga0070711_100058572 Ga0070711_1000585722 323
111 3300025303 Ga0209051_1000367 Ga0209051_100036723 323
112 3300025304 Ga0209257_1000012 Ga0209257_1000012545 323
113 3300025901 Ga0207688_10001105 Ga0207688_100011052 323
114 3300037418 Ga0395900_0118497 Ga0395900_0118497_507_1490 323
115 3300037471 Ga0395905_0209078 Ga0395905_0209078_371_1354 323
116 3300005434 Ga0070709_10065916 Ga0070709_100659162 324
117 3300005983 Ga0081540_1008029 Ga0081540_10080292 324
118 3300006048 Ga0075363_100002510 Ga0075363_1000025106 324
119 3300006051 Ga0075364_10110595 Ga0075364_101105952 324
120 3300006173 Ga0070716_100066743 Ga0070716_1000667432 324
121 3300006178 Ga0075367_10029258 Ga0075367_100292582 324
122 3300025939 Ga0207665_10001717 Ga0207665_100017177 324
123 3300039437 Ga0436365_1440372 Ga0436365_1440372_10_993 324
124 3300044673 Ga0453683_0013299 Ga0453683_0013299_797_1783 324
125 3300045051 Ga0451576_0061064 Ga0451576_0061064_2292_3278 324
126 3300048904 Ga0496101_0111091 Ga0496101_0111091_795_1910 324
127 3300048909 Ga0496106_0106719 Ga0496106_0106719_88_1203 324
128 3300050512 nmdc:mga0n895_161963_c1 nmdc:mga0n895_161963_c1_400_1515 324
129 3300005355 Ga0070671_100201438 Ga0070671_1002014382 325
130 3300005366 Ga0070659_100189953 Ga0070659_1001899532 325
131 3300005535 Ga0070684_100278971 Ga0070684_1002789711 325
132 3300046501 Ga0495607_0002534 Ga0495607_0002534_1218_2216 325
133 3300003215 JGI25153J46596_10008863 JGI25153J46596_100088632 326
134 3300005564 Ga0070664_100116581 Ga0070664_1001165813 326
135 3300005981 Ga0081538_10033642 Ga0081538_100336422 326
136 3300025297 Ga0209758_1000772 Ga0209758_10007726 326
137 3300049588 Ga0501072_0000405 Ga0501072_0000405_22596_23585 326
138 3300060353 Ga0501082_0223952 Ga0501082_0223952_562_1551 326
139 3300006051 Ga0075364_10016103 Ga0075364_100161036 327
140 3300031247 Ga0265340_10085886 Ga0265340_100858862 327
141 3300031344 Ga0265316_10021601 Ga0265316_100216013 327
142 3300031595 Ga0265313_10007774 Ga0265313_100077746 327
143 3300031712 Ga0265342_10008709 Ga0265342_100087091 327
144 3300049744 Ga0501083_0045039 Ga0501083_0045039_1689_2708 327
145 3300050491 nmdc:mga00v17_1897_c1 nmdc:mga00v17_1897_c1_6884_7891 327
146 3300005334 Ga0068869_100056844 Ga0068869_1000568442 328
147 3300005441 Ga0070700_100018962 Ga0070700_1000189621 328
148 3300006175 Ga0070712_100037976 Ga0070712_1000379763 328
149 3300006846 Ga0075430_100070816 Ga0075430_1000708162 328
150 3300025915 Ga0207693_10077495 Ga0207693_100774952 328
151 3300046689 Ga0495613_0161794 Ga0495613_0161794_20_1012 328
152 3300050493 nmdc:mga0k408_20443_c1 nmdc:mga0k408_20443_c1_2437_3549 328
153 3300050509 nmdc:mga0qj67_51118_c1 nmdc:mga0qj67_51118_c1_1813_2805 328
154 3300050510 nmdc:mga06r32_52475_c1 nmdc:mga06r32_52475_c1_515_1507 328
155 3300002239 JGI24034J26672_10007224 JGI24034J26672_100072242 329
156 3300005331 Ga0070670_100056167 Ga0070670_1000561673 329
157 3300005335 Ga0070666_10076501 Ga0070666_100765012 329
158 3300005340 Ga0070689_100023917 Ga0070689_1000239173 329
159 3300005347 Ga0070668_100088074 Ga0070668_1000880742 329
160 3300005354 Ga0070675_100049017 Ga0070675_1000490172 329
161 3300005356 Ga0070674_100019783 Ga0070674_1000197835 329
162 3300005365 Ga0070688_100010353 Ga0070688_1000103533 329
163 3300005367 Ga0070667_100029245 Ga0070667_1000292455 329
164 3300005436 Ga0070713_100248825 Ga0070713_1002488251 329
165 3300005439 Ga0070711_100105801 Ga0070711_1001058012 329
166 3300005455 Ga0070663_100033805 Ga0070663_1000338052 329
167 3300005457 Ga0070662_100023421 Ga0070662_1000234214 329
168 3300005459 Ga0068867_100023389 Ga0068867_1000233894 329
169 3300005535 Ga0070684_100076764 Ga0070684_1000767641 329
170 3300005543 Ga0070672_100021128 Ga0070672_1000211285 329
171 3300005548 Ga0070665_100486901 Ga0070665_1004869011 329
172 3300005577 Ga0068857_100162966 Ga0068857_1001629662 329
173 3300005578 Ga0068854_100038060 Ga0068854_1000380602 329
174 3300005615 Ga0070702_100022254 Ga0070702_1000222542 329
175 3300005616 Ga0068852_100097042 Ga0068852_1000970422 329
176 3300005617 Ga0068859_100463136 Ga0068859_1004631362 329
177 3300005618 Ga0068864_100004578 Ga0068864_10000457812 329
178 3300005718 Ga0068866_10012942 Ga0068866_100129421 329
179 3300005719 Ga0068861_100030254 Ga0068861_1000302543 329
180 3300005834 Ga0068851_10053280 Ga0068851_100532802 329
181 3300005840 Ga0068870_10004900 Ga0068870_100049002 329
182 3300005841 Ga0068863_100016140 Ga0068863_1000161405 329
183 3300005842 Ga0068858_100029477 Ga0068858_1000294772 329
184 3300005844 Ga0068862_100018457 Ga0068862_1000184575 329
185 3300005937 Ga0081455_10121480 Ga0081455_101214803 329
186 3300005981 Ga0081538_10067197 Ga0081538_100671972 329
187 3300005985 Ga0081539_10107675 Ga0081539_101076752 329
188 3300006028 Ga0070717_10258094 Ga0070717_102580942 329
189 3300006038 Ga0075365_10030494 Ga0075365_100304943 329
190 3300006178 Ga0075367_10176915 Ga0075367_101769151 329
191 3300006353 Ga0075370_10170858 Ga0075370_101708581 329
192 3300006358 Ga0068871_100045638 Ga0068871_1000456382 329
193 3300006844 Ga0075428_100001027 Ga0075428_10000102712 329
194 3300006844 Ga0075428_100065854 Ga0075428_1000658542 329
195 3300006844 Ga0075428_100153130 Ga0075428_1001531302 329
196 3300006844 Ga0075428_100153782 Ga0075428_1001537822 329
197 3300006847 Ga0075431_100000017 Ga0075431_10000001749 329
198 3300006847 Ga0075431_100049090 Ga0075431_1000490902 329
199 3300006847 Ga0075431_100147522 Ga0075431_1001475222 329
200 3300006871 Ga0075434_100083990 Ga0075434_1000839902 329
201 3300006871 Ga0075434_100308474 Ga0075434_1003084741 329
202 3300006881 Ga0068865_100083990 Ga0068865_1000839903 329
203 3300006931 Ga0097620_100463135 Ga0097620_1004631351 329
204 3300007265 Ga0099794_10016066 Ga0099794_100160662 329
205 3300009092 Ga0105250_10040112 Ga0105250_100401122 329
206 3300009147 Ga0114129_10000025 Ga0114129_1000002581 329
207 3300009147 Ga0114129_10074451 Ga0114129_100744513 329
208 3300009147 Ga0114129_10793559 Ga0114129_107935591 329
209 3300009148 Ga0105243_10225318 Ga0105243_102253182 329
210 3300009551 Ga0105238_10141815 Ga0105238_101418151 329
211 3300009553 Ga0105249_10119654 Ga0105249_101196542 329
212 3300010375 Ga0105239_10438373 Ga0105239_104383732 329
213 3300011119 Ga0105246_10033750 Ga0105246_100337502 329
214 3300013297 Ga0157378_10029468 Ga0157378_100294684 329
215 3300013306 Ga0163162_10028272 Ga0163162_100282722 329
216 3300013308 Ga0157375_10131709 Ga0157375_101317093 329
217 3300017792 Ga0163161_10080999 Ga0163161_100809991 329
218 3300025908 Ga0207643_10000387 Ga0207643_100003872 329
219 3300025915 Ga0207693_10186465 Ga0207693_101864651 329
220 3300025916 Ga0207663_10038417 Ga0207663_100384172 329
221 3300025918 Ga0207662_10010233 Ga0207662_100102335 329
222 3300025919 Ga0207657_10034973 Ga0207657_100349732 329
223 3300025925 Ga0207650_10025231 Ga0207650_100252313 329
224 3300025926 Ga0207659_10019416 Ga0207659_100194162 329
225 3300025928 Ga0207700_10329909 Ga0207700_103299091 329
226 3300025934 Ga0207686_10129691 Ga0207686_101296912 329
227 3300025935 Ga0207709_10281900 Ga0207709_102819001 329
228 3300025936 Ga0207670_10021293 Ga0207670_100212932 329
229 3300025937 Ga0207669_10030411 Ga0207669_100304112 329
230 3300025938 Ga0207704_10051789 Ga0207704_100517893 329
231 3300025940 Ga0207691_10028372 Ga0207691_100283723 329
232 3300025941 Ga0207711_10167058 Ga0207711_101670582 329
233 3300025942 Ga0207689_10002173 Ga0207689_100021732 329
234 3300025961 Ga0207712_10165119 Ga0207712_101651192 329
235 3300025972 Ga0207668_10095016 Ga0207668_100950161 329
236 3300025986 Ga0207658_10069679 Ga0207658_100696792 329
237 3300026041 Ga0207639_10063939 Ga0207639_100639392 329
238 3300026067 Ga0207678_10103214 Ga0207678_101032142 329
239 3300026075 Ga0207708_10001620 Ga0207708_100016205 329
240 3300026088 Ga0207641_10480228 Ga0207641_104802281 329
241 3300026089 Ga0207648_10006315 Ga0207648_1000631511 329
242 3300026118 Ga0207675_100038331 Ga0207675_1000383312 329
243 3300026121 Ga0207683_10024882 Ga0207683_100248821 329
244 3300026142 Ga0207698_10101366 Ga0207698_101013661 329
245 3300027907 Ga0207428_10001198 Ga0207428_1000119820 329
246 3300028380 Ga0268265_10031224 Ga0268265_100312244 329
247 3300028381 Ga0268264_10031171 Ga0268264_100311715 329
248 3300035089 Ga0373944_0020559 Ga0373944_0020559_96_1091 329
249 3300035170 Ga0373943_0046498 Ga0373943_0046498_1019_2014 329
250 3300035171 Ga0373946_0077998 Ga0373946_0077998_358_1353 329
251 3300035692 Ga0373935_0103963 Ga0373935_0103963_152_1147 329
252 3300046472 Ga0495580_0165111 Ga0495580_0165111_308_1303 329
253 3300046475 Ga0495639_0010511 Ga0495639_0010511_2431_3426 329
254 3300046537 Ga0495598_0008033 Ga0495598_0008033_310_1305 329
255 3300046539 Ga0495621_0048225 Ga0495621_0048225_191_1186 329
256 3300046558 Ga0495633_0137623 Ga0495633_0137623_60_1055 329
257 3300046664 Ga0495659_0066767 Ga0495659_0066767_61_1056 329
258 3300046665 Ga0495661_0097190 Ga0495661_0097190_486_1562 329
259 3300046681 Ga0495647_0011834 Ga0495647_0011834_1367_2362 329
260 3300046683 Ga0495658_0065381 Ga0495658_0065381_184_1179 329
261 3300046692 Ga0495671_0049501 Ga0495671_0049501_1052_2041 329
262 3300047322 Ga0495680_0264136 Ga0495680_0264136_199_1188 329
263 3300048904 Ga0496101_0001573 Ga0496101_0001573_4596_5633 329
264 3300048905 Ga0496102_0014548 Ga0496102_0014548_2004_3041 329
265 3300048905 Ga0496102_0074369 Ga0496102_0074369_1793_2785 329
266 3300048906 Ga0496103_0029775 Ga0496103_0029775_2040_3077 329
267 3300048907 Ga0496104_0008002 Ga0496104_0008002_3506_4498 329
268 3300048907 Ga0496104_0038696 Ga0496104_0038696_2144_3181 329
269 3300048909 Ga0496106_0133021 Ga0496106_0133021_754_1791 329
270 3300048910 Ga0496107_0004013 Ga0496107_0004013_8113_9150 329
271 3300048911 Ga0496108_0017276 Ga0496108_0017276_1050_2087 329
272 3300048912 Ga0496109_0070094 Ga0496109_0070094_667_1704 329
273 3300048913 Ga0496110_0135692 Ga0496110_0135692_433_1470 329
274 3300048913 Ga0496110_0142561 Ga0496110_0142561_553_1557 329
275 3300048914 Ga0496111_0011245 Ga0496111_0011245_4629_5666 329
276 3300048915 Ga0496112_0009904 Ga0496112_0009904_7158_8195 329
277 3300048918 Ga0496115_0005841 Ga0496115_0005841_3398_4435 329
278 3300048918 Ga0496115_0174498 Ga0496115_0174498_602_1597 329
279 3300049741 Ga0501079_0356091 Ga0501079_0356091_119_1117 329
280 3300050492 nmdc:mga0yw44_21655_c1 nmdc:mga0yw44_21655_c1_1601_2596 329
281 3300050494 nmdc:mga06z11_40587_c1 nmdc:mga06z11_40587_c1_1168_2169 329
282 3300050494 nmdc:mga06z11_90609_c1 nmdc:mga06z11_90609_c1_75_1070 329
283 3300050507 nmdc:mga05p37_5080_c1 nmdc:mga05p37_5080_c1_12259_13362 329
284 3300050507 nmdc:mga05p37_95_c1 nmdc:mga05p37_95_c1_50193_51218 329
285 3300050510 nmdc:mga06r32_114_c1 nmdc:mga06r32_114_c1_129_1154 329
286 3300050510 nmdc:mga06r32_74874_c1 nmdc:mga06r32_74874_c1_972_2075 329
287 3300050512 nmdc:mga0n895_57190_c1 nmdc:mga0n895_57190_c1_2729_3724 329
288 3300053083 Ga0495655_0042732 Ga0495655_0042732_65_1054 329
289 3300061734 Ga0530510_0124958 Ga0530510_0124958_530_1528 329

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

105

377

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dvz-assembly1.cif.gz_A structure of a periplasmic transporter 0.9707 33 329
5oku-assembly1.cif.gz_A r. palustris rpa4515 with adipate 0.9691 34 327
2f5x-assembly3.cif.gz_C structure of periplasmic binding protein bugd 0.9655 34 327
8hkb-assembly1.cif.gz_A tpa bound-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis mutant k184d 0.9646 37 329
2dvz-assembly1.cif.gz_A structure of a periplasmic transporter 0.9581 33 329
ID Description Score Start End Superfamily
4x9tA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9426 133 248 3.40.190.10
2qpqC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9364 133 253 3.40.190.10
6hkeC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9356 133 253 3.40.190.10
2qpqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9221 34 329 3.40.190.150
2f5xC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.922 134 253 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A520EAY2-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9745 37 329
AF-A0A5C8CF86-F1-model_v4 deleted 0.9743 44 329
AF-A0A4Q7NH98-F1-model_v4 Tripartite-type tricarboxylate transporter receptor subunit TctC 0.9726 32 329
AF-A0A7X1NZ53-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9708 34 327
AF-V8QW12-F1-model_v4 ABC transporter substrate-binding protein 0.9702 42 329

Feature Viewer

pLDDT pTM Quality
90.46 0.85 High
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Predicted Structure (AlphaFold2)

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