F389865

General Info

Members Datasets Scaffolds Average Seq Length
290 172 290 411

Family's Representative Sequence

Representative Sequence 3300036712|Ga0316584_0072434|Ga0316584_0072434_1112_2515
Length 461
Sequence MYPAPPVTKMFMRVKLFAATGRLNAKRTCVALPDDAGYFGIAADIRSRYSPSMDSVSAVIAVVWLLILARWAAQLWLERLNRRHVMAHADAVPDAFKGVVDELTYAKSVQYTLAKGRLDQVESTWDTAVLLAVLFSTVLPWGFEFFTQRLGTSAWAMGAFLLVTGVALSLPGLPLSWYDQFRLEEHFGFNTTTQKLWWLDRLKGLLLAVVLGYPLLVLVLKLVEWTGPWWALLTFQLLMLVLAPVLILPLFNKFTPLPEGGLRERLLKLAERTQFRARSIQVMDGSKRSRHSNAFFTGFGRFRKIVLFDTLIQQLAEPELEAVLAHEIGHYRKKHILKILVLSALSSLVGFWLISLLARQDWFYRSFGFAPGSIVPALLLFGLLSGVITFWFSPVAHWWSRRYEYQADAFAAEVMKEAQSLVGALRKLNEKNLSNLTPHPLYSGFYYSHPTLLERERALAG

Samples

Sample ID Description Type Environment
1 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
78 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
79 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
80 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
81 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
82 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
83 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
84 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
85 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
86 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
87 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
88 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
89 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
90 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
91 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
92 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
93 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
94 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
95 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
96 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
97 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
98 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
99 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
100 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
101 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
102 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
103 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
104 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
105 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
106 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
107 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
108 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
109 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
110 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
111 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
112 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
113 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
114 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
115 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
116 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
117 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
118 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
119 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
120 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
123 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
124 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
125 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
126 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
127 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
128 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
129 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
130 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
131 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
132 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
133 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
134 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
137 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
138 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
139 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
140 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
141 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
152 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
153 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
154 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
155 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
156 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
157 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
161 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
164 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
165 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
166 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
167 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
168 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
169 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
170 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
171 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.45
Nodule 0
Rhizoplane 0.34
Rhizosphere 95.86
Stem 0
Stem Tuber 0
Unclassified 0.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25405J52794_10001160 3300003911 Unclassified 4247
2 JGI25405J52794_10006303 3300003911 Unclassified 2165
3 Ga0065712_10075812 3300005290 Bacteria 3784
4 Ga0065707_10151041 3300005295 Bacteria 1658
5 Ga0070670_100168482 3300005331 Unclassified 1899
6 Ga0070666_10118749 3300005335 Bacteria 1833
7 Ga0070680_100103672 3300005336 Bacteria 2363
8 Ga0070689_100000565 3300005340 Bacteria 22216
9 Ga0070689_100002694 3300005340 Bacteria 11639
10 Ga0070661_100024956 3300005344 Bacteria 4292
11 Ga0070671_100147854 3300005355 Bacteria 1984
12 Ga0070688_100054959 3300005365 Unclassified 2496
13 Ga0070714_100005087 3300005435 Bacteria 10008
14 Ga0070713_100070907 3300005436 Unclassified 2943
15 Ga0070701_10012741 3300005438 Bacteria 3800
16 Ga0070694_100020746 3300005444 Unclassified 4192
17 Ga0070708_100085101 3300005445 Bacteria 2869
18 Ga0070708_100186118 3300005445 Unclassified 1942
19 Ga0070681_10044960 3300005458 Bacteria 4420
20 Ga0070681_10060521 3300005458 Unclassified 3763
21 Ga0070706_100020748 3300005467 Bacteria 6051
22 Ga0070707_100003479 3300005468 Bacteria 14870
23 Ga0070679_100245411 3300005530 Bacteria 1748
24 Ga0070697_100047301 3300005536 Unclassified 3488
25 Ga0070697_100188857 3300005536 Unclassified 1748
26 Ga0070704_100127176 3300005549 Bacteria 1968
27 Ga0068855_100136144 3300005563 Unclassified 2803
28 Ga0068855_100222766 3300005563 Bacteria 2114
29 Ga0068855_100477242 3300005563 Unclassified 1358
30 Ga0068857_100004832 3300005577 Bacteria 11419
31 Ga0068859_100020088 3300005617 Bacteria 6706
32 Ga0068859_100165326 3300005617 Unclassified 2292
33 Ga0068864_100073839 3300005618 Bacteria 2974
34 Ga0068863_100077663 3300005841 Unclassified 3142
35 Ga0081455_10000205 3300005937 Bacteria 75563
36 Ga0081455_10002485 3300005937 Bacteria 21904
37 Ga0081455_10004167 3300005937 Bacteria 16315
38 Ga0081540_1000361 3300005983 Bacteria 45807
39 Ga0070717_10081652 3300006028 Bacteria 2714
40 Ga0070716_100092932 3300006173 Archaea 1830
41 Ga0070712_100027980 3300006175 Bacteria 3767
42 Ga0075367_10046703 3300006178 Bacteria 2545
43 Ga0075369_10009437 3300006186 Bacteria 3791
44 Ga0075369_10032439 3300006186 Bacteria 2210
45 Ga0075366_10026204 3300006195 Bacteria 3414
46 Ga0097621_100017538 3300006237 Bacteria 5439
47 Ga0068871_100037988 3300006358 Bacteria 3842
48 Ga0075428_100001222 3300006844 Bacteria 27529
49 Ga0075428_100005662 3300006844 Bacteria 13890
50 Ga0075430_100062587 3300006846 Bacteria 3125
51 Ga0075431_100007147 3300006847 Bacteria 11097
52 Ga0075436_100051102 3300006914 Bacteria 2853
53 Ga0097620_100020086 3300006931 Bacteria 6706
54 Ga0097620_100165324 3300006931 Unclassified 2292
55 Ga0075435_100064218 3300007076 Bacteria 2982
56 Ga0075435_100076153 3300007076 Bacteria 2749
57 Ga0105240_10007317 3300009093 Bacteria 16063
58 Ga0105240_10021939 3300009093 Bacteria 8480
59 Ga0105240_10102261 3300009093 Unclassified 3483
60 Ga0105240_10205894 3300009093 Bacteria 2303
61 Ga0111539_10019033 3300009094 Bacteria 8486
62 Ga0111539_10055859 3300009094 Bacteria 4694
63 Ga0111539_10068912 3300009094 Bacteria 4177
64 Ga0105245_10163266 3300009098 Unclassified 2115
65 Ga0105245_10287362 3300009098 Unclassified 1610
66 Ga0114129_10022270 3300009147 Bacteria 8995
67 Ga0114129_10054147 3300009147 Bacteria 5626
68 Ga0114129_10055697 3300009147 Bacteria 5541
69 Ga0114129_10063728 3300009147 Bacteria 5145
70 Ga0114129_10201894 3300009147 Unclassified 2692
71 Ga0114129_10244141 3300009147 Bacteria 2413
72 Ga0105243_10164769 3300009148 Bacteria 1914
73 Ga0105242_10075432 3300009176 Bacteria 2807
74 Ga0105242_10096197 3300009176 Unclassified 2501
75 Ga0105242_10123331 3300009176 Unclassified 2227
76 Ga0105248_10187647 3300009177 Bacteria 2330
77 Ga0105248_10261797 3300009177 Bacteria 1947
78 Ga0105249_10133010 3300009553 Unclassified 2377
79 Ga0105249_10272366 3300009553 Bacteria 1687
80 Ga0157370_10136794 3300013104 Unclassified 2283
81 Ga0157374_10137694 3300013296 Bacteria 2368
82 Ga0157378_10178348 3300013297 Unclassified 1997
83 Ga0157372_10137417 3300013307 Bacteria 2815
84 Ga0157375_10000038 3300013308 Bacteria 171905
85 Ga0157375_10007460 3300013308 Bacteria 9570
86 Ga0163163_10000086 3300014325 Bacteria 102881
87 Ga0163163_10084692 3300014325 Unclassified 3177
88 Ga0157376_10245073 3300014969 Unclassified 1671
89 Ga0207697_10007957 3300025315 Unclassified 4683
90 Ga0207684_10019394 3300025910 Bacteria 5819
91 Ga0207707_10148529 3300025912 Bacteria 2049
92 Ga0207695_10039261 3300025913 Bacteria 5088
93 Ga0207695_10108360 3300025913 Bacteria 2762
94 Ga0207695_10159716 3300025913 Bacteria 2186
95 Ga0207660_10055158 3300025917 Bacteria 2839
96 Ga0207662_10018581 3300025918 Bacteria 3948
97 Ga0207646_10020416 3300025922 Bacteria 6136
98 Ga0207694_10009718 3300025924 Bacteria 7256
99 Ga0207664_10024385 3300025929 Bacteria 4545
100 Ga0207706_10071483 3300025933 Bacteria 3051
101 Ga0207670_10067816 3300025936 Unclassified 2456
102 Ga0207704_10054376 3300025938 Bacteria 2441
103 Ga0207665_10108307 3300025939 Bacteria 1949
104 Ga0207712_10145311 3300025961 Unclassified 1825
105 Ga0207702_10084210 3300026078 Bacteria 2768
106 Ga0207641_10020032 3300026088 Bacteria 5492
107 Ga0207674_10023857 3300026116 Bacteria 6543
108 Ga0207428_10026292 3300027907 Bacteria 4859
109 Ga0268266_10216139 3300028379 Bacteria 1760
110 Ga0265337_1000219 3300028556 Bacteria 30526
111 Ga0265337_1003290 3300028556 Bacteria 7061
112 Ga0265326_10008151 3300028558 Bacteria 3172
113 Ga0265326_10010231 3300028558 Bacteria 2788
114 Ga0265319_1011286 3300028563 Bacteria 3666
115 Ga0265323_10002326 3300028653 Bacteria 8794
116 Ga0265323_10024414 3300028653 Bacteria 2298
117 Ga0265336_10002141 3300028666 Bacteria 8357
118 Ga0265338_10001491 3300028800 Bacteria 37899
119 Ga0265338_10001830 3300028800 Bacteria 33346
120 Ga0265338_10003065 3300028800 Bacteria 24008
121 Ga0265338_10008576 3300028800 Bacteria 12370
122 Ga0265338_10011005 3300028800 Bacteria 10506
123 Ga0265338_10017518 3300028800 Bacteria 7715
124 Ga0265338_10017750 3300028800 Bacteria 7653
125 Ga0265338_10070418 3300028800 Unclassified 2999
126 Ga0265338_10104556 3300028800 Unclassified 2297
127 Ga0265338_10123802 3300028800 Unclassified 2055
128 Ga0265338_10163606 3300028800 Bacteria 1716
129 Ga0265324_10020490 3300029957 Bacteria 2376
130 Ga0265324_10035454 3300029957 Bacteria 1737
131 Ga0307511_10008326 3300030521 Bacteria 10380
132 Ga0265330_10000735 3300031235 Bacteria 20673
133 Ga0265320_10000303 3300031240 Bacteria 40288
134 Ga0265320_10002581 3300031240 Bacteria 12581
135 Ga0265320_10028833 3300031240 Unclassified 2878
136 Ga0265320_10029406 3300031240 Bacteria 2842
137 Ga0265325_10067193 3300031241 Bacteria 1806
138 Ga0265339_10016000 3300031249 Bacteria 4481
139 Ga0265327_10004679 3300031251 Bacteria 11979
140 Ga0265327_10016759 3300031251 Bacteria 4632
141 Ga0265327_10040412 3300031251 Bacteria 2523
142 Ga0265316_10011503 3300031344 Bacteria 7973
143 Ga0265316_10018001 3300031344 Bacteria 6086
144 Ga0265316_10018222 3300031344 Bacteria 6040
145 Ga0265316_10025455 3300031344 Bacteria 4937
146 Ga0265316_10029650 3300031344 Bacteria 4494
147 Ga0316575_10001476 3300031665 Bacteria 7583
148 Ga0316575_10022852 3300031665 Unclassified 2414
149 Ga0316579_10010443 3300031691 Bacteria 3927
150 Ga0265314_10001333 3300031711 Bacteria 27988
151 Ga0265314_10073301 3300031711 Bacteria 2283
152 Ga0265342_10003576 3300031712 Bacteria 12689
153 Ga0316576_10000254 3300031727 Bacteria 23200
154 Ga0316578_10000989 3300031728 Bacteria 10841
155 Ga0316577_10000038 3300031733 Bacteria 29113
156 Ga0316577_10014426 3300031733 Bacteria 4337
157 Ga0316583_10010770 3300032133 Unclassified 3296
158 Ga0316583_10017233 3300032133 Unclassified 2597
159 Ga0316585_10001424 3300032137 Bacteria 6316
160 Ga0316580_10001744 3300032139 Bacteria 5805
161 Ga0373953_0023049 3300035117 Unclassified 2354
162 Ga0373954_0034680 3300035118 Unclassified 2339
163 Ga0373956_0021218 3300035119 Unclassified 2770
164 Ga0316574_0000262 3300035398 Bacteria 19377
165 Ga0316574_0004381 3300035398 Bacteria 7384
166 Ga0316574_0034771 3300035398 Unclassified 3075
167 Ga0373924_0027744 3300035410 Unclassified 2253
168 Ga0373935_0013405 3300035692 Unclassified 4945
169 Ga0373927_0006582 3300035695 Bacteria 7914
170 Ga0373947_0010147 3300035725 Bacteria 5408
171 Ga0373937_0007024 3300036401 Bacteria 9718
172 Ga0373937_0093008 3300036401 Bacteria 2795
173 Ga0316582_0000157 3300036647 Bacteria 20677
174 Ga0316582_0081897 3300036647 Bacteria 2109
175 Ga0316582_0185127 3300036647 Bacteria 1418
176 Ga0316584_0003601 3300036712 Bacteria 10125
177 Ga0316584_0014891 3300036712 Bacteria 5555
178 Ga0316584_0072434 3300036712 Bacteria 2583
179 Ga0373925_0001271 3300037068 Bacteria 22275
180 Ga0373925_0006219 3300037068 Bacteria 8811
181 Ga0395899_0010282 3300037312 Bacteria 7174
182 Ga0395900_0166130 3300037418 Unclassified 2249
183 Ga0395898_0069777 3300037466 Bacteria 3399
184 Ga0316581_0001638 3300037588 Bacteria 5127
185 Ga0395901_0016322 3300038443 Bacteria 7563
186 Ga0395901_0027129 3300038443 Bacteria 5883
187 Ga0451577_0000328 3300042876 Bacteria 88518
188 Ga0451577_0000709 3300042876 Bacteria 52105
189 Ga0451577_0000911 3300042876 Bacteria 43516
190 Ga0451577_0003772 3300042876 Bacteria 16509
191 Ga0451577_0018899 3300042876 Bacteria 6344
192 Ga0451577_0058821 3300042876 Unclassified 3427
193 Ga0451577_0089195 3300042876 Bacteria 2752
194 Ga0451577_0151441 3300042876 Bacteria 2087
195 Ga0451577_0191251 3300042876 Bacteria 1846
196 Ga0451577_0201263 3300042876 Bacteria 1798
197 Ga0453683_0000114 3300044673 Bacteria 119864
198 Ga0453683_0000350 3300044673 Bacteria 55884
199 Ga0453683_0001012 3300044673 Bacteria 26365
200 Ga0453683_0025943 3300044673 Bacteria 3721
201 Ga0453683_0079433 3300044673 Bacteria 2054
202 Ga0453684_0000950 3300044712 Bacteria 95538
203 Ga0453684_0001822 3300044712 Bacteria 56009
204 Ga0453684_0004306 3300044712 Bacteria 30332
205 Ga0453684_0005069 3300044712 Bacteria 26634
206 Ga0453684_0006117 3300044712 Bacteria 23181
207 Ga0453684_0006435 3300044712 Bacteria 22311
208 Ga0453684_0012980 3300044712 Bacteria 13628
209 Ga0453684_0013698 3300044712 Bacteria 13133
210 Ga0453684_0014984 3300044712 Bacteria 12312
211 Ga0453684_0018756 3300044712 Bacteria 10590
212 Ga0453684_0047290 3300044712 Bacteria 5708
213 Ga0453684_0163967 3300044712 Bacteria 2626
214 Ga0453684_0165663 3300044712 Bacteria 2610
215 Ga0453684_0193837 3300044712 Unclassified 2374
216 Ga0451576_0000091 3300045051 Bacteria 228478
217 Ga0451576_0000151 3300045051 Bacteria 176466
218 Ga0451576_0000323 3300045051 Bacteria 115834
219 Ga0451576_0011564 3300045051 Bacteria 10013
220 Ga0451576_0025247 3300045051 Bacteria 6404
221 Ga0451576_0028382 3300045051 Bacteria 5995
222 Ga0451576_0117325 3300045051 Bacteria 2771
223 Ga0451576_0121112 3300045051 Bacteria 2724
224 Ga0495592_0000008 3300046454 Bacteria 175382
225 Ga0495592_0051363 3300046454 Bacteria 3062
226 Ga0495629_0109231 3300046459 Bacteria 1929
227 Ga0495653_0141839 3300046463 Unclassified 1689
228 Ga0495618_0006632 3300046514 Bacteria 7013
229 Ga0495618_0035755 3300046514 Bacteria 3118
230 Ga0495628_0000166 3300046516 Bacteria 57276
231 Ga0495630_0000061 3300046517 Bacteria 88178
232 Ga0495666_0013940 3300046526 Bacteria 4009
233 Ga0495640_0037772 3300046533 Bacteria 3402
234 Ga0495640_0049238 3300046533 Bacteria 2907
235 Ga0495640_0049456 3300046533 Bacteria 2899
236 Ga0495586_0000008 3300046535 Bacteria 148781
237 Ga0495586_0000851 3300046535 Bacteria 17497
238 Ga0495586_0009184 3300046535 Bacteria 5260
239 Ga0495667_0018549 3300046559 Bacteria 4700
240 Ga0495634_0025135 3300046642 Bacteria 4172
241 Ga0495635_0102113 3300046663 Unclassified 1960
242 Ga0495599_0003686 3300046678 Bacteria 8978
243 Ga0495599_0027061 3300046678 Bacteria 3594
244 Ga0495658_0018172 3300046683 Unclassified 3649
245 Ga0495613_0002257 3300046689 Bacteria 14566
246 Ga0495674_0000178 3300047319 Bacteria 49926
247 Ga0495674_0070452 3300047319 Bacteria 3021
248 Ga0495676_0068365 3300047321 Unclassified 2745
249 Ga0495684_0084335 3300047471 Bacteria 2410
250 Ga0496115_0005450 3300048918 Bacteria 9256
251 Ga0501031_0041866 3300049568 Bacteria 2990
252 Ga0501032_0132316 3300049569 Unclassified 1645
253 Ga0501033_0005726 3300049570 Bacteria 9800
254 Ga0501033_0041371 3300049570 Bacteria 3439
255 Ga0501036_0049778 3300049572 Bacteria 3548
256 Ga0501038_0004795 3300049574 Bacteria 12567
257 Ga0501039_0008218 3300049575 Bacteria 7954
258 Ga0501040_0129369 3300049576 Bacteria 1774
259 Ga0501041_0023723 3300049577 Bacteria 3678
260 Ga0501046_0027976 3300049580 Bacteria 4594
261 Ga0501048_0052747 3300049582 Bacteria 2894
262 Ga0501068_0017305 3300049584 Bacteria 4167
263 Ga0501072_0097764 3300049588 Bacteria 2333
264 Ga0501074_0049036 3300049590 Bacteria 3049
265 Ga0501075_0118330 3300049591 Bacteria 2014
266 Ga0501077_0037025 3300049593 Bacteria 3108
267 Ga0501077_0043925 3300049593 Bacteria 2839
268 Ga0501079_0046378 3300049741 Bacteria 3353
269 Ga0501081_0066098 3300049743 Bacteria 2514
270 Ga0501035_0031229 3300049822 Bacteria 4851
271 Ga0501044_0009752 3300049823 Bacteria 10449
272 nmdc:mga03n38_61645_c1 3300050490 Bacteria 1709
273 nmdc:mga0k408_65485_c1 3300050493 Bacteria 2115
274 nmdc:mga05p37_308449_c1 3300050507 Bacteria 1877
275 nmdc:mga05p37_39837_c1 3300050507 Bacteria 5770
276 nmdc:mga05p37_42352_c1 3300050507 Bacteria 5594
277 nmdc:mga05p37_46768_c1 3300050507 Bacteria 5320
278 nmdc:mga0qj67_12645_c1 3300050509 Bacteria 6364
279 nmdc:mga06r32_28312_c1 3300050510 Bacteria 5241
280 nmdc:mga08y16_171922_c2 3300050511 Unclassified 1562
281 nmdc:mga08y16_52294_c1 3300050511 Bacteria 4274
282 nmdc:mga08y16_8647_c1 3300050511 Bacteria 9888
283 nmdc:mga0a205_153618_c1 3300050515 Bacteria 2200
284 nmdc:mga0a205_350621_c1 3300050515 Bacteria 1343
285 Ga0500646_0000566 3300053090 Bacteria 10641
286 Ga0500655_001997 3300053133 Bacteria 3791
287 Ga0500604_0000282 3300053151 Bacteria 14132
288 Ga0500622_0036632 3300053156 Bacteria 2564
289 Ga0501084_0116256 3300054114 Bacteria 2248
290 Ga0501082_0037252 3300060353 Bacteria 4191

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300013297 Ga0157378_10178348 Ga0157378_101783482 319
2 3300046459 Ga0495629_0109231 Ga0495629_0109231_19_1065 323
3 3300053156 Ga0500622_0036632 Ga0500622_0036632_222_1262 328
4 3300047321 Ga0495676_0068365 Ga0495676_0068365_1646_2710 329
5 3300044712 Ga0453684_0163967 Ga0453684_0163967_906_2174 353
6 3300005290 Ga0065712_10075812 Ga0065712_100758123 356
7 3300005468 Ga0070707_100003479 Ga0070707_1000034799 356
8 3300046683 Ga0495658_0018172 Ga0495658_0018172_67_1320 369
9 3300009176 Ga0105242_10123331 Ga0105242_101233312 370
10 3300031251 Ga0265327_10040412 Ga0265327_100404122 371
11 3300013308 Ga0157375_10000038 Ga0157375_1000003838 372
12 3300035398 Ga0316574_0004381 Ga0316574_0004381_136_1368 372
13 3300036647 Ga0316582_0000157 Ga0316582_0000157_8515_9747 372
14 3300036712 Ga0316584_0003601 Ga0316584_0003601_1095_2327 372
15 3300037588 Ga0316581_0001638 Ga0316581_0001638_327_1559 372
16 3300045051 Ga0451576_0117325 Ga0451576_0117325_186_1433 373
17 3300035398 Ga0316574_0034771 Ga0316574_0034771_1773_3026 375
18 3300031665 Ga0316575_10022852 Ga0316575_100228522 376
19 3300031691 Ga0316579_10010443 Ga0316579_100104434 376
20 3300031727 Ga0316576_10000254 Ga0316576_1000025419 376
21 3300031728 Ga0316578_10000989 Ga0316578_100009893 376
22 3300031733 Ga0316577_10000038 Ga0316577_100000388 376
23 3300032133 Ga0316583_10010770 Ga0316583_100107702 376
24 3300032137 Ga0316585_10001424 Ga0316585_100014244 376
25 3300032139 Ga0316580_10001744 Ga0316580_100017445 376
26 3300042876 Ga0451577_0191251 Ga0451577_0191251_19_1239 376
27 3300044712 Ga0453684_0165663 Ga0453684_0165663_61_1311 376
28 3300042876 Ga0451577_0201263 Ga0451577_0201263_17_1255 378
29 3300009147 Ga0114129_10055697 Ga0114129_100556973 379
30 3300009148 Ga0105243_10164769 Ga0105243_101647692 379
31 3300025938 Ga0207704_10054376 Ga0207704_100543763 379
32 3300046517 Ga0495630_0000061 Ga0495630_0000061_39902_41167 379
33 3300046526 Ga0495666_0013940 Ga0495666_0013940_2282_3547 379
34 3300046533 Ga0495640_0049238 Ga0495640_0049238_64_1329 379
35 3300046535 Ga0495586_0000008 Ga0495586_0000008_99908_101173 379
36 3300047319 Ga0495674_0000178 Ga0495674_0000178_34735_36000 379
37 3300050507 nmdc:mga05p37_39837_c1 nmdc:mga05p37_39837_c1_404_1669 379
38 3300003911 JGI25405J52794_10006303 JGI25405J52794_100063032 380
39 3300005937 Ga0081455_10004167 Ga0081455_100041678 380
40 3300009147 Ga0114129_10054147 Ga0114129_100541472 380
41 3300006914 Ga0075436_100051102 Ga0075436_1000511022 381
42 3300007076 Ga0075435_100076153 Ga0075435_1000761532 381
43 3300009176 Ga0105242_10096197 Ga0105242_100961972 381
44 3300025933 Ga0207706_10071483 Ga0207706_100714832 381
45 3300037068 Ga0373925_0006219 Ga0373925_0006219_5911_7176 381
46 3300050515 nmdc:mga0a205_153618_c1 nmdc:mga0a205_153618_c1_919_2184 381
47 3300028653 Ga0265323_10024414 Ga0265323_100244142 382
48 3300028800 Ga0265338_10008576 Ga0265338_1000857613 382
49 3300031344 Ga0265316_10018001 Ga0265316_100180012 382
50 3300035119 Ga0373956_0021218 Ga0373956_0021218_1321_2685 382
51 3300035410 Ga0373924_0027744 Ga0373924_0027744_566_1921 382
52 3300036401 Ga0373937_0093008 Ga0373937_0093008_865_2229 382
53 3300006237 Ga0097621_100017538 Ga0097621_1000175383 384
54 3300006358 Ga0068871_100037988 Ga0068871_1000379882 384
55 3300009098 Ga0105245_10287362 Ga0105245_102873622 384
56 3300028558 Ga0265326_10010231 Ga0265326_100102312 384
57 3300007076 Ga0075435_100064218 Ga0075435_1000642182 385
58 3300028800 Ga0265338_10163606 Ga0265338_101636061 385
59 3300028800 Ga0265338_10001830 Ga0265338_100018309 386
60 3300044673 Ga0453683_0025943 Ga0453683_0025943_1639_2898 386
61 3300045051 Ga0451576_0000323 Ga0451576_0000323_113613_114872 386
62 3300028653 Ga0265323_10002326 Ga0265323_100023262 388
63 3300031344 Ga0265316_10025455 Ga0265316_100254552 388
64 3300005295 Ga0065707_10151041 Ga0065707_101510412 389
65 3300005617 Ga0068859_100020088 Ga0068859_1000200889 389
66 3300006931 Ga0097620_100020086 Ga0097620_1000200869 389
67 3300044673 Ga0453683_0000350 Ga0453683_0000350_29319_30554 389
68 3300031249 Ga0265339_10016000 Ga0265339_100160003 390
69 3300042876 Ga0451577_0000328 Ga0451577_0000328_15148_16380 390
70 3300044712 Ga0453684_0000950 Ga0453684_0000950_22060_23292 390
71 3300005563 Ga0068855_100136144 Ga0068855_1001361443 391
72 3300013296 Ga0157374_10137694 Ga0157374_101376943 391
73 3300013308 Ga0157375_10007460 Ga0157375_100074602 391
74 3300025924 Ga0207694_10009718 Ga0207694_100097185 391
75 3300026078 Ga0207702_10084210 Ga0207702_100842104 391
76 3300028558 Ga0265326_10008151 Ga0265326_100081513 391
77 3300028800 Ga0265338_10017750 Ga0265338_100177507 391
78 3300031241 Ga0265325_10067193 Ga0265325_100671932 391
79 3300031711 Ga0265314_10073301 Ga0265314_100733012 391
80 3300042876 Ga0451577_0003772 Ga0451577_0003772_13049_14293 391
81 3300042876 Ga0451577_0018899 Ga0451577_0018899_1946_3187 391
82 3300042876 Ga0451577_0058821 Ga0451577_0058821_412_1650 391
83 3300042876 Ga0451577_0089195 Ga0451577_0089195_1344_2582 391
84 3300044673 Ga0453683_0001012 Ga0453683_0001012_11347_12594 391
85 3300044673 Ga0453683_0079433 Ga0453683_0079433_548_1795 391
86 3300044712 Ga0453684_0006435 Ga0453684_0006435_12857_14098 391
87 3300044712 Ga0453684_0013698 Ga0453684_0013698_9898_11139 391
88 3300045051 Ga0451576_0028382 Ga0451576_0028382_2728_3969 391
89 3300050511 nmdc:mga08y16_171922_c2 nmdc:mga08y16_171922_c2_132_1397 391
90 3300031251 Ga0265327_10004679 Ga0265327_100046794 392
91 3300031665 Ga0316575_10001476 Ga0316575_100014766 392
92 3300031733 Ga0316577_10014426 Ga0316577_100144263 392
93 3300032133 Ga0316583_10017233 Ga0316583_100172332 392
94 3300035398 Ga0316574_0000262 Ga0316574_0000262_8974_10239 392
95 3300036647 Ga0316582_0081897 Ga0316582_0081897_835_2085 392
96 3300036712 Ga0316584_0014891 Ga0316584_0014891_2469_3719 392
97 3300037312 Ga0395899_0010282 Ga0395899_0010282_5326_6648 392
98 3300037466 Ga0395898_0069777 Ga0395898_0069777_918_2240 392
99 3300042876 Ga0451577_0151441 Ga0451577_0151441_64_1299 392
100 3300044673 Ga0453683_0000114 Ga0453683_0000114_99862_101103 392
101 3300044712 Ga0453684_0005069 Ga0453684_0005069_21040_22281 392
102 3300044712 Ga0453684_0014984 Ga0453684_0014984_5681_6919 392
103 3300045051 Ga0451576_0000151 Ga0451576_0000151_64294_65535 392
104 3300005445 Ga0070708_100085101 Ga0070708_1000851012 393
105 3300005536 Ga0070697_100188857 Ga0070697_1001888571 393
106 3300005618 Ga0068864_100073839 Ga0068864_1000738393 393
107 3300005841 Ga0068863_100077663 Ga0068863_1000776632 393
108 3300009098 Ga0105245_10163266 Ga0105245_101632662 393
109 3300014325 Ga0163163_10084692 Ga0163163_100846921 393
110 3300026088 Ga0207641_10020032 Ga0207641_100200322 393
111 3300028800 Ga0265338_10011005 Ga0265338_100110056 393
112 3300028800 Ga0265338_10123802 Ga0265338_101238022 393
113 3300031344 Ga0265316_10029650 Ga0265316_100296503 393
114 3300036712 Ga0316584_0072434 Ga0316584_0072434_1112_2515 393
115 3300044712 Ga0453684_0001822 Ga0453684_0001822_9145_10383 393
116 3300045051 Ga0451576_0000091 Ga0451576_0000091_70552_71790 393
117 3300005340 Ga0070689_100000565 Ga0070689_1000005654 394
118 3300005563 Ga0068855_100222766 Ga0068855_1002227661 394
119 3300006178 Ga0075367_10046703 Ga0075367_100467033 394
120 3300006186 Ga0075369_10009437 Ga0075369_100094372 394
121 3300006186 Ga0075369_10032439 Ga0075369_100324393 394
122 3300006195 Ga0075366_10026204 Ga0075366_100262044 394
123 3300006844 Ga0075428_100001222 Ga0075428_10000122220 394
124 3300009093 Ga0105240_10205894 Ga0105240_102058942 394
125 3300009094 Ga0111539_10068912 Ga0111539_100689124 394
126 3300009177 Ga0105248_10261797 Ga0105248_102617972 394
127 3300013307 Ga0157372_10137417 Ga0157372_101374172 394
128 3300014325 Ga0163163_10000086 Ga0163163_1000008614 394
129 3300025936 Ga0207670_10067816 Ga0207670_100678162 394
130 3300028556 Ga0265337_1003290 Ga0265337_10032907 394
131 3300028800 Ga0265338_10017518 Ga0265338_100175184 394
132 3300028800 Ga0265338_10070418 Ga0265338_100704183 394
133 3300029957 Ga0265324_10020490 Ga0265324_100204901 394
134 3300030521 Ga0307511_10008326 Ga0307511_1000832614 394
135 3300031240 Ga0265320_10000303 Ga0265320_1000030320 394
136 3300031251 Ga0265327_10016759 Ga0265327_100167592 394
137 3300031711 Ga0265314_10001333 Ga0265314_1000133319 394
138 3300035692 Ga0373935_0013405 Ga0373935_0013405_504_1772 394
139 3300035695 Ga0373927_0006582 Ga0373927_0006582_1518_2786 394
140 3300035725 Ga0373947_0010147 Ga0373947_0010147_688_1956 394
141 3300036647 Ga0316582_0185127 Ga0316582_0185127_75_1334 394
142 3300037068 Ga0373925_0001271 Ga0373925_0001271_12119_13387 394
143 3300044712 Ga0453684_0047290 Ga0453684_0047290_4426_5673 394
144 3300044712 Ga0453684_0193837 Ga0453684_0193837_744_2033 394
145 3300048918 Ga0496115_0005450 Ga0496115_0005450_3865_5106 394
146 3300049568 Ga0501031_0041866 Ga0501031_0041866_821_2086 394
147 3300049569 Ga0501032_0132316 Ga0501032_0132316_204_1469 394
148 3300049570 Ga0501033_0005726 Ga0501033_0005726_1944_3209 394
149 3300049570 Ga0501033_0041371 Ga0501033_0041371_759_1997 394
150 3300049572 Ga0501036_0049778 Ga0501036_0049778_1655_2920 394
151 3300049574 Ga0501038_0004795 Ga0501038_0004795_8559_9824 394
152 3300049575 Ga0501039_0008218 Ga0501039_0008218_5614_6879 394
153 3300049576 Ga0501040_0129369 Ga0501040_0129369_184_1449 394
154 3300049577 Ga0501041_0023723 Ga0501041_0023723_1507_2772 394
155 3300049580 Ga0501046_0027976 Ga0501046_0027976_1902_3167 394
156 3300049582 Ga0501048_0052747 Ga0501048_0052747_1088_2353 394
157 3300049584 Ga0501068_0017305 Ga0501068_0017305_868_2133 394
158 3300049588 Ga0501072_0097764 Ga0501072_0097764_119_1384 394
159 3300049590 Ga0501074_0049036 Ga0501074_0049036_200_1465 394
160 3300049591 Ga0501075_0118330 Ga0501075_0118330_129_1394 394
161 3300049593 Ga0501077_0037025 Ga0501077_0037025_605_1861 394
162 3300049593 Ga0501077_0043925 Ga0501077_0043925_171_1436 394
163 3300049741 Ga0501079_0046378 Ga0501079_0046378_1222_2487 394
164 3300049743 Ga0501081_0066098 Ga0501081_0066098_1222_2487 394
165 3300049822 Ga0501035_0031229 Ga0501035_0031229_894_2159 394
166 3300049823 Ga0501044_0009752 Ga0501044_0009752_726_1991 394
167 3300050490 nmdc:mga03n38_61645_c1 nmdc:mga03n38_61645_c1_424_1665 394
168 3300050493 nmdc:mga0k408_65485_c1 nmdc:mga0k408_65485_c1_545_1801 394
169 3300050511 nmdc:mga08y16_52294_c1 nmdc:mga08y16_52294_c1_516_1793 394
170 3300053090 Ga0500646_0000566 Ga0500646_0000566_8794_10050 394
171 3300053133 Ga0500655_001997 Ga0500655_001997_1171_2427 394
172 3300053151 Ga0500604_0000282 Ga0500604_0000282_3038_4294 394
173 3300054114 Ga0501084_0116256 Ga0501084_0116256_657_1922 394
174 3300060353 Ga0501082_0037252 Ga0501082_0037252_1783_3048 394
175 3300005336 Ga0070680_100103672 Ga0070680_1001036722 395
176 3300005365 Ga0070688_100054959 Ga0070688_1000549592 395
177 3300005530 Ga0070679_100245411 Ga0070679_1002454112 395
178 3300005563 Ga0068855_100477242 Ga0068855_1004772421 395
179 3300005577 Ga0068857_100004832 Ga0068857_1000048327 395
180 3300006173 Ga0070716_100092932 Ga0070716_1000929322 395
181 3300006844 Ga0075428_100005662 Ga0075428_10000566211 395
182 3300006846 Ga0075430_100062587 Ga0075430_1000625871 395
183 3300006847 Ga0075431_100007147 Ga0075431_1000071472 395
184 3300009093 Ga0105240_10021939 Ga0105240_100219395 395
185 3300009093 Ga0105240_10102261 Ga0105240_101022615 395
186 3300009094 Ga0111539_10019033 Ga0111539_100190331 395
187 3300009147 Ga0114129_10063728 Ga0114129_100637283 395
188 3300009147 Ga0114129_10201894 Ga0114129_102018942 395
189 3300009176 Ga0105242_10075432 Ga0105242_100754322 395
190 3300025912 Ga0207707_10148529 Ga0207707_101485292 395
191 3300025913 Ga0207695_10039261 Ga0207695_100392614 395
192 3300025913 Ga0207695_10159716 Ga0207695_101597162 395
193 3300025917 Ga0207660_10055158 Ga0207660_100551582 395
194 3300025939 Ga0207665_10108307 Ga0207665_101083072 395
195 3300026116 Ga0207674_10023857 Ga0207674_100238576 395
196 3300027907 Ga0207428_10026292 Ga0207428_100262922 395
197 3300028556 Ga0265337_1000219 Ga0265337_100021920 395
198 3300028563 Ga0265319_1011286 Ga0265319_10112862 395
199 3300028666 Ga0265336_10002141 Ga0265336_100021419 395
200 3300028800 Ga0265338_10001491 Ga0265338_1000149122 395
201 3300028800 Ga0265338_10003065 Ga0265338_1000306513 395
202 3300029957 Ga0265324_10035454 Ga0265324_100354542 395
203 3300031240 Ga0265320_10002581 Ga0265320_100025816 395
204 3300031240 Ga0265320_10029406 Ga0265320_100294062 395
205 3300044712 Ga0453684_0012980 Ga0453684_0012980_5949_7202 395
206 3300044712 Ga0453684_0018756 Ga0453684_0018756_9019_10365 395
207 3300045051 Ga0451576_0011564 Ga0451576_0011564_688_1944 395
208 3300046454 Ga0495592_0051363 Ga0495592_0051363_1529_2893 395
209 3300046463 Ga0495653_0141839 Ga0495653_0141839_274_1566 395
210 3300046678 Ga0495599_0003686 Ga0495599_0003686_4632_5879 395
211 3300046678 Ga0495599_0027061 Ga0495599_0027061_56_1348 395
212 3300047471 Ga0495684_0084335 Ga0495684_0084335_650_2026 395
213 3300050507 nmdc:mga05p37_308449_c1 nmdc:mga05p37_308449_c1_13_1278 395
214 3300050507 nmdc:mga05p37_42352_c1 nmdc:mga05p37_42352_c1_3188_4453 395
215 3300050509 nmdc:mga0qj67_12645_c1 nmdc:mga0qj67_12645_c1_4080_5345 395
216 3300050510 nmdc:mga06r32_28312_c1 nmdc:mga06r32_28312_c1_1684_2949 395
217 3300050511 nmdc:mga08y16_8647_c1 nmdc:mga08y16_8647_c1_7088_8353 395
218 3300005436 Ga0070713_100070907 Ga0070713_1000709074 396
219 3300005438 Ga0070701_10012741 Ga0070701_100127412 396
220 3300005444 Ga0070694_100020746 Ga0070694_1000207462 396
221 3300005458 Ga0070681_10044960 Ga0070681_100449604 396
222 3300005549 Ga0070704_100127176 Ga0070704_1001271762 396
223 3300005617 Ga0068859_100165326 Ga0068859_1001653262 396
224 3300006931 Ga0097620_100165324 Ga0097620_1001653242 396
225 3300009093 Ga0105240_10007317 Ga0105240_100073177 396
226 3300009094 Ga0111539_10055859 Ga0111539_100558593 396
227 3300009177 Ga0105248_10187647 Ga0105248_101876472 396
228 3300009553 Ga0105249_10133010 Ga0105249_101330102 396
229 3300009553 Ga0105249_10272366 Ga0105249_102723662 396
230 3300013104 Ga0157370_10136794 Ga0157370_101367942 396
231 3300014969 Ga0157376_10245073 Ga0157376_102450733 396
232 3300025913 Ga0207695_10108360 Ga0207695_101083602 396
233 3300025961 Ga0207712_10145311 Ga0207712_101453112 396
234 3300031235 Ga0265330_10000735 Ga0265330_1000073513 396
235 3300031240 Ga0265320_10028833 Ga0265320_100288333 396
236 3300031344 Ga0265316_10011503 Ga0265316_100115039 396
237 3300031344 Ga0265316_10018222 Ga0265316_100182222 396
238 3300031712 Ga0265342_10003576 Ga0265342_100035762 396
239 3300035117 Ga0373953_0023049 Ga0373953_0023049_993_2237 396
240 3300035118 Ga0373954_0034680 Ga0373954_0034680_537_1781 396
241 3300036401 Ga0373937_0007024 Ga0373937_0007024_1155_2399 396
242 3300042876 Ga0451577_0000911 Ga0451577_0000911_539_1819 396
243 3300044712 Ga0453684_0004306 Ga0453684_0004306_6786_8057 396
244 3300044712 Ga0453684_0006117 Ga0453684_0006117_2550_3830 396
245 3300045051 Ga0451576_0025247 Ga0451576_0025247_1122_2483 396
246 3300045051 Ga0451576_0121112 Ga0451576_0121112_155_1417 396
247 3300046454 Ga0495592_0000008 Ga0495592_0000008_29207_30472 396
248 3300046514 Ga0495618_0006632 Ga0495618_0006632_2669_3934 396
249 3300046514 Ga0495618_0035755 Ga0495618_0035755_882_2126 396
250 3300046516 Ga0495628_0000166 Ga0495628_0000166_3180_4445 396
251 3300046533 Ga0495640_0037772 Ga0495640_0037772_755_2020 396
252 3300046533 Ga0495640_0049456 Ga0495640_0049456_208_1452 396
253 3300046535 Ga0495586_0000851 Ga0495586_0000851_4704_5969 396
254 3300046535 Ga0495586_0009184 Ga0495586_0009184_885_2129 396
255 3300046559 Ga0495667_0018549 Ga0495667_0018549_1976_3220 396
256 3300046642 Ga0495634_0025135 Ga0495634_0025135_399_1643 396
257 3300046663 Ga0495635_0102113 Ga0495635_0102113_501_1745 396
258 3300046689 Ga0495613_0002257 Ga0495613_0002257_11286_12530 396
259 3300047319 Ga0495674_0070452 Ga0495674_0070452_1586_2851 396
260 3300005435 Ga0070714_100005087 Ga0070714_1000050872 397
261 3300025929 Ga0207664_10024385 Ga0207664_100243852 397
262 3300028800 Ga0265338_10104556 Ga0265338_101045562 397
263 3300042876 Ga0451577_0000709 Ga0451577_0000709_37968_39236 397
264 3300005355 Ga0070671_100147854 Ga0070671_1001478541 398
265 3300005331 Ga0070670_100168482 Ga0070670_1001684821 400
266 3300005335 Ga0070666_10118749 Ga0070666_101187492 400
267 3300005344 Ga0070661_100024956 Ga0070661_1000249563 400
268 3300005445 Ga0070708_100186118 Ga0070708_1001861181 400
269 3300005458 Ga0070681_10060521 Ga0070681_100605213 400
270 3300005467 Ga0070706_100020748 Ga0070706_1000207482 400
271 3300025910 Ga0207684_10019394 Ga0207684_100193942 400
272 3300025922 Ga0207646_10020416 Ga0207646_100204164 400
273 3300028379 Ga0268266_10216139 Ga0268266_102161392 400
274 3300005536 Ga0070697_100047301 Ga0070697_1000473013 401
275 3300003911 JGI25405J52794_10001160 JGI25405J52794_100011602 402
276 3300005340 Ga0070689_100002694 Ga0070689_1000026943 402
277 3300005937 Ga0081455_10000205 Ga0081455_1000020562 402
278 3300005937 Ga0081455_10002485 Ga0081455_1000248513 402
279 3300005983 Ga0081540_1000361 Ga0081540_100036127 402
280 3300006028 Ga0070717_10081652 Ga0070717_100816522 402
281 3300006175 Ga0070712_100027980 Ga0070712_1000279801 402
282 3300009147 Ga0114129_10022270 Ga0114129_100222703 402
283 3300009147 Ga0114129_10244141 Ga0114129_102441411 402
284 3300025315 Ga0207697_10007957 Ga0207697_100079571 402
285 3300025918 Ga0207662_10018581 Ga0207662_100185813 402
286 3300037418 Ga0395900_0166130 Ga0395900_0166130_661_1923 402
287 3300038443 Ga0395901_0016322 Ga0395901_0016322_3701_5023 402
288 3300038443 Ga0395901_0027129 Ga0395901_0027129_1623_2885 402
289 3300050507 nmdc:mga05p37_46768_c1 nmdc:mga05p37_46768_c1_2059_3321 402
290 3300050515 nmdc:mga0a205_350621_c1 nmdc:mga0a205_350621_c1_17_1279 402

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16491

Peptidase_M48_N

CAAX prenyl protease N-terminal, five membrane helices

81

253

0.97

PF01435

Peptidase_M48

Peptidase family M48

256

461

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ypt-assembly2.cif.gz_A crystal structure of the human nuclear membrane zinc metalloprotease zmpste24 mutant (e336a) in complex with a synthetic csim tetrapeptide from the c-terminus of prelamin a 0.8782 2 399
2ypt-assembly4.cif.gz_E crystal structure of the human nuclear membrane zinc metalloprotease zmpste24 mutant (e336a) in complex with a synthetic csim tetrapeptide from the c-terminus of prelamin a 0.8772 2 398
6bh8-assembly2.cif.gz_B crystal structure of zmpste24 in complex with phosphoramidon 0.8717 1 397
2ypt-assembly2.cif.gz_A crystal structure of the human nuclear membrane zinc metalloprotease zmpste24 mutant (e336a) in complex with a synthetic csim tetrapeptide from the c-terminus of prelamin a 0.8699 2 399
2ypt-assembly4.cif.gz_E crystal structure of the human nuclear membrane zinc metalloprotease zmpste24 mutant (e336a) in complex with a synthetic csim tetrapeptide from the c-terminus of prelamin a 0.8669 2 398
ID Description Score Start End Superfamily
af_Q55C18_272_352_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9517 184 264 3.30.2010.10
af_A0A1D8PL01_226_308_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9419 184 264 3.30.2010.10
af_Q55C18_272_352_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9291 184 264 3.30.2010.10
af_A0A1D8PL01_226_308_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9096 184 264 3.30.2010.10
af_Q7K172_215_314_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.885 184 264 3.30.2010.10
ID Description Score Start End GO Terms
AF-A0A2V5J5V2-F1-model_v4 Peptidase M48 0.9921 1 174 GO:0016020
AF-A0A2V5JMX8-F1-model_v4 Peptidase M48 0.987 37 172 GO:0016020
AF-A0A2V5SLT8-F1-model_v4 Peptidase M48 0.9601 267 401 GO:0004222
GO:0006508
GO:0016020
GO:0046872
AF-A0A2V5JMX8-F1-model_v4 Peptidase M48 0.9591 37 172 GO:0016020
AF-A0A258LME7-F1-model_v4 Peptidase M48 0.957 183 400 GO:0004222
GO:0016020
GO:0046872
GO:0071586

Feature Viewer

pLDDT pTM Quality
82.57 0.77 High
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Predicted Structure (AlphaFold2)

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