F389908

General Info

Members Datasets Scaffolds Average Seq Length
290 184 580 257

Family's Representative Sequence

Representative Sequence 3300044673|Ga0453683_0032790|Ga0453683_0032790_485_1396
Length 303
Sequence MTRITRRDLLTTALAAALGGAGLAARGRGKGAAPMTGPTTRDARTGRLPVLFVGHGNPMNAIEDNRWSRAFRALGAAVPAPRAILAVSAHWYGAGTHTTAAARPETIHDFYGFPDALSRVAYPAPGDPDLARRVAGLLADRAASPSDEWGLDHGTWSVLVHLRPAADVPVVQLSLDARLPAAEHLAIGRALAPLRDEGVLILGSGNLVHNLRHAFSAMHRGEHATPEWARAFDEEIARALERQDGDALVRALQTETGRLAHPTPDHYLPLLYVAGASRPGEPVRFPIEGFDLSSLSMRSVTIG

Samples

Sample ID Description Type Environment
1 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
65 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
101 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
102 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
103 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
104 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
105 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
106 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
107 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
108 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
109 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
110 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
111 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
112 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
113 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
114 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
115 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
116 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
117 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
118 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
119 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
120 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
121 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
126 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
127 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
128 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
129 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
130 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
131 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
132 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
133 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
134 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
135 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
138 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
139 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
140 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
141 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
153 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
154 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
155 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
156 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
157 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
158 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
159 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
160 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
161 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
162 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
163 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
164 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
165 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
166 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
169 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
170 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
173 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
174 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
175 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
176 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
177 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
178 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
179 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
180 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
181 2643221547 Pseudolabrys sp. Root1462 Isolate Unclassified
182 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
183 2885266251 Ralstonia sp. SET104 Isolate Nodule
184 2932398195 Dietzia sp. 2505 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.59
Metatranscriptomes 0
Isolates 2.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.38
Nodule 0.34
Rhizoplane 1.38
Rhizosphere 92.76
Stem 0
Stem Tuber 0
Unclassified 0.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453683_0032790 3300044673 Bacteria 3275
2 rootL2_10323107 3300003322 Bacteria 2264
3 Ga0065707_10185744 3300005295 Bacteria 1390
4 Ga0070658_10017796 3300005327 Bacteria 5682
5 Ga0070683_100022594 3300005329 Bacteria 5624
6 Ga0070666_10000514 3300005335 Bacteria 23396
7 Ga0070680_100006325 3300005336 Bacteria 8993
8 Ga0068868_100106639 3300005338 Bacteria 2273
9 Ga0070660_100345163 3300005339 Bacteria 1225
10 Ga0070689_100302550 3300005340 Bacteria 1331
11 Ga0070691_10000587 3300005341 Bacteria 13944
12 Ga0070691_10006566 3300005341 Bacteria 5321
13 Ga0070691_10153503 3300005341 Bacteria 1182
14 Ga0070661_100239150 3300005344 Bacteria 1398
15 Ga0070669_100026442 3300005353 Bacteria 4175
16 Ga0070671_100202203 3300005355 Bacteria 1685
17 Ga0070674_100158145 3300005356 Bacteria 1717
18 Ga0070673_100013432 3300005364 Bacteria 5665
19 Ga0070659_100030140 3300005366 Bacteria 4197
20 Ga0070714_100076072 3300005435 Bacteria 2914
21 Ga0070713_100019351 3300005436 Bacteria 5195
22 Ga0070678_100026582 3300005456 Bacteria 3916
23 Ga0070681_10005503 3300005458 Bacteria 12236
24 Ga0070681_10011766 3300005458 Bacteria 8672
25 Ga0070681_10069608 3300005458 Bacteria 3485
26 Ga0070681_10255453 3300005458 Bacteria 1665
27 Ga0070679_100002889 3300005530 Bacteria 15609
28 Ga0070684_100017650 3300005535 Bacteria 5863
29 Ga0070684_100140592 3300005535 Bacteria 2183
30 Ga0068853_100117107 3300005539 Bacteria 2373
31 Ga0068855_100032108 3300005563 Bacteria 6269
32 Ga0068857_100241046 3300005577 Bacteria 1655
33 Ga0068857_100243732 3300005577 Bacteria 1646
34 Ga0068856_100097428 3300005614 Bacteria 2930
35 Ga0068852_100081089 3300005616 Bacteria 2879
36 Ga0068852_100092227 3300005616 Bacteria 2712
37 Ga0068859_100271984 3300005617 Bacteria 1786
38 Ga0068864_100138768 3300005618 Bacteria 2191
39 Ga0068863_100004533 3300005841 Bacteria 13698
40 Ga0068863_100030538 3300005841 Bacteria 5144
41 Ga0068858_100001960 3300005842 Bacteria 21009
42 Ga0068858_100153194 3300005842 Bacteria 2168
43 Ga0068858_100543284 3300005842 Bacteria 1125
44 Ga0068860_100098561 3300005843 Bacteria 2787
45 Ga0068862_100260921 3300005844 Bacteria 1582
46 Ga0081455_10082942 3300005937 Bacteria 2621
47 Ga0075367_10318482 3300006178 Bacteria 980
48 Ga0075366_10020087 3300006195 Bacteria 3873
49 Ga0097621_100373797 3300006237 Bacteria 1272
50 Ga0068871_100105963 3300006358 Bacteria 2360
51 Ga0075428_100009257 3300006844 Bacteria 10921
52 Ga0075431_100478515 3300006847 Bacteria 1238
53 Ga0075433_10000772 3300006852 Bacteria 22032
54 Ga0075434_100000891 3300006871 Bacteria 23915
55 Ga0097620_100271976 3300006931 Bacteria 1786
56 Ga0105240_10018062 3300009093 Bacteria 9484
57 Ga0105240_10079762 3300009093 Bacteria 4027
58 Ga0111539_10039709 3300009094 Bacteria 5671
59 Ga0111539_10362026 3300009094 Bacteria 1688
60 Ga0105245_10260087 3300009098 Bacteria 1689
61 Ga0105238_10014577 3300009551 Bacteria 7946
62 Ga0105238_10194332 3300009551 Bacteria 2005
63 Ga0105238_10428842 3300009551 Bacteria 1318
64 Ga0105239_10013513 3300010375 Bacteria 9065
65 Ga0105239_10120562 3300010375 Bacteria 2912
66 Ga0105239_10229761 3300010375 Bacteria 2081
67 Ga0157373_10030845 3300013100 Bacteria 3857
68 Ga0157371_10026562 3300013102 Bacteria 4207
69 Ga0157370_10009458 3300013104 Bacteria 10410
70 Ga0157370_10059894 3300013104 Bacteria 3616
71 Ga0157369_10043604 3300013105 Bacteria 4888
72 Ga0157369_10130685 3300013105 Bacteria 2661
73 Ga0157374_10059969 3300013296 Bacteria 3560
74 Ga0157378_10000373 3300013297 Bacteria 44286
75 Ga0157378_10317631 3300013297 Bacteria 1512
76 Ga0163162_10243795 3300013306 Bacteria 1928
77 Ga0157372_10134206 3300013307 Bacteria 2850
78 Ga0157375_10388705 3300013308 Bacteria 1562
79 Ga0163163_10000394 3300014325 Bacteria 41415
80 Ga0163163_10005941 3300014325 Bacteria 10624
81 Ga0157380_10012208 3300014326 Bacteria 6224
82 Ga0182008_10256203 3300014497 Bacteria 904
83 Ga0157379_10000982 3300014968 Bacteria 23145
84 Ga0157376_10123485 3300014969 Bacteria 2299
85 Ga0207426_1020244 3300025302 Bacteria 2314
86 Ga0207680_10023923 3300025903 Bacteria 3344
87 Ga0207647_10000313 3300025904 Bacteria 40307
88 Ga0207647_10135376 3300025904 Bacteria 1446
89 Ga0207705_10123591 3300025909 Bacteria 1922
90 Ga0207654_10023995 3300025911 Bacteria 3274
91 Ga0207707_10020113 3300025912 Bacteria 5826
92 Ga0207707_10170149 3300025912 Bacteria 1904
93 Ga0207707_10353806 3300025912 Bacteria 1265
94 Ga0207695_10060046 3300025913 Bacteria 3939
95 Ga0207695_10115144 3300025913 Bacteria 2663
96 Ga0207660_10061095 3300025917 Bacteria 2711
97 Ga0207660_10441015 3300025917 Bacteria 1052
98 Ga0207657_10095282 3300025919 Bacteria 2477
99 Ga0207657_10115788 3300025919 Bacteria 2209
100 Ga0207649_10166323 3300025920 Bacteria 1532
101 Ga0207681_10068483 3300025923 Bacteria 2465
102 Ga0207694_10128534 3300025924 Bacteria 2029
103 Ga0207659_10451039 3300025926 Bacteria 1083
104 Ga0207687_10097644 3300025927 Bacteria 2155
105 Ga0207700_10105975 3300025928 Bacteria 2252
106 Ga0207644_10284771 3300025931 Bacteria 1328
107 Ga0207644_10285067 3300025931 Bacteria 1327
108 Ga0207690_10037671 3300025932 Bacteria 3141
109 Ga0207706_10134697 3300025933 Bacteria 2173
110 Ga0207669_10310973 3300025937 Bacteria 1202
111 Ga0207704_10083221 3300025938 Bacteria 2076
112 Ga0207691_10213035 3300025940 Bacteria 1677
113 Ga0207661_10130374 3300025944 Bacteria 2153
114 Ga0207661_10273274 3300025944 Bacteria 1508
115 Ga0207667_10099188 3300025949 Bacteria 3005
116 Ga0207677_10059871 3300026023 Bacteria 2629
117 Ga0207703_10005454 3300026035 Bacteria 10228
118 Ga0207703_10450740 3300026035 Bacteria 1202
119 Ga0207639_10001322 3300026041 Bacteria 16783
120 Ga0207702_10009538 3300026078 Bacteria 8147
121 Ga0207702_10125775 3300026078 Bacteria 2301
122 Ga0207641_10007545 3300026088 Bacteria 9047
123 Ga0207676_10541155 3300026095 Bacteria 1111
124 Ga0207674_10232380 3300026116 Bacteria 1792
125 Ga0207674_10234163 3300026116 Bacteria 1784
126 Ga0207674_10485151 3300026116 Bacteria 1194
127 Ga0207683_10008055 3300026121 Bacteria 9010
128 Ga0207683_10033182 3300026121 Bacteria 4483
129 Ga0207698_10103012 3300026142 Bacteria 2371
130 Ga0209974_10025510 3300027876 Bacteria 1956
131 Ga0207428_10030835 3300027907 Bacteria 4430
132 Ga0207428_10288328 3300027907 Bacteria 1217
133 Ga0268266_10007529 3300028379 Bacteria 9809
134 Ga0268264_10121069 3300028381 Bacteria 2306
135 Ga0268264_10370844 3300028381 Bacteria 1368
136 Ga0265323_10000019 3300028653 Bacteria 89556
137 Ga0265323_10019493 3300028653 Archaea 2615
138 Ga0265322_10000065 3300028654 Bacteria 52080
139 Ga0265322_10000336 3300028654 Bacteria 19816
140 Ga0265322_10034147 3300028654 Archaea 1450
141 Ga0265338_10102839 3300028800 Bacteria 2322
142 Ga0265324_10026071 3300029957 Unclassified 2070
143 Ga0265330_10070603 3300031235 Bacteria 1511
144 Ga0265328_10020792 3300031239 Bacteria 2510
145 Ga0265340_10016306 3300031247 Bacteria 3849
146 Ga0265340_10145165 3300031247 Bacteria 1084
147 Ga0265331_10073954 3300031250 Bacteria 1591
148 Ga0265316_10001287 3300031344 Bacteria 26991
149 Ga0265316_10107585 3300031344 Bacteria 2114
150 Ga0265314_10092711 3300031711 Bacteria 1963
151 Ga0265342_10019930 3300031712 Bacteria 4314
152 Ga0265342_10027552 3300031712 Bacteria 3549
153 Ga0316576_10081239 3300031727 Bacteria 2405
154 Ga0316578_10156006 3300031728 Bacteria 1376
155 Ga0307516_10021342 3300031730 Bacteria 6668
156 Ga0307411_10237695 3300032005 Bacteria 1424
157 Ga0307507_10048512 3300033179 Bacteria 4129
158 Ga0373959_0020432 3300034820 Bacteria 1264
159 Ga0373926_0145761 3300035083 Bacteria 900
160 Ga0373960_0058272 3300035121 Bacteria 1165
161 Ga0373931_0152061 3300035691 Bacteria 1350
162 Ga0373933_0202596 3300035724 Bacteria 1270
163 Ga0316584_0180740 3300036712 Bacteria 1562
164 Ga0395900_0143814 3300037418 Bacteria 2440
165 Ga0395898_0468147 3300037466 Bacteria 1199
166 Ga0395905_0509236 3300037471 Bacteria 1104
167 Ga0395901_0151081 3300038443 Bacteria 2440
168 Ga0395901_0152955 3300038443 Bacteria 2423
169 Ga0436365_1048902 3300039437 Bacteria 2421
170 Ga0436365_1190743 3300039437 Bacteria 1382
171 Ga0451853_0614861 3300041512 Bacteria 5035
172 Ga0450892_011504 3300042130 Bacteria 786
173 Ga0451577_0000209 3300042876 Bacteria 122695
174 Ga0451577_0001146 3300042876 Bacteria 37411
175 Ga0451577_0008784 3300042876 Bacteria 9788
176 Ga0451577_0212676 3300042876 Archaea 1747
177 Ga0451577_0535470 3300042876 Bacteria 1064
178 Ga0453683_0000636 3300044673 Bacteria 38148
179 Ga0453683_0004665 3300044673 Bacteria 9674
180 Ga0453683_0012662 3300044673 Bacteria 5525
181 Ga0453683_0067976 3300044673 Bacteria 2227
182 Ga0453683_0087965 3300044673 Bacteria 1947
183 Ga0453683_0104230 3300044673 Bacteria 1781
184 Ga0466963_0029918 3300044694 Bacteria 3509
185 Ga0453684_0000016 3300044712 Archaea 938453
186 Ga0453684_0000362 3300044712 Bacteria 187378
187 Ga0453684_0021403 3300044712 Bacteria 9662
188 Ga0453684_0037866 3300044712 Bacteria 6611
189 Ga0453684_0057270 3300044712 Bacteria 5045
190 Ga0453684_0129305 3300044712 Bacteria 3032
191 Ga0453684_0215318 3300044712 Bacteria 2229
192 Ga0453684_0284734 3300044712 Bacteria 1883
193 Ga0451576_0007193 3300045051 Bacteria 13411
194 Ga0451576_0011436 3300045051 Bacteria 10084
195 Ga0451576_0018363 3300045051 Bacteria 7668
196 Ga0451576_0029193 3300045051 Bacteria 5902
197 Ga0451576_0149618 3300045051 Bacteria 2435
198 Ga0466967_0131997 3300045976 Bacteria 2319
199 Ga0466967_0248671 3300045976 Bacteria 1698
200 Ga0495654_0230190 3300046530 Bacteria 780
201 Ga0496110_0008455 3300048913 Bacteria 8285
202 Ga0496113_0553459 3300048916 Bacteria 923
203 Ga0496114_0032285 3300048917 Bacteria 4308
204 Ga0496115_0000123 3300048918 Bacteria 70348
205 Ga0496118_0024135 3300048921 Bacteria 5258
206 Ga0496124_0000003 3300048927 Bacteria 1300161
207 Ga0496126_0002497 3300048929 Bacteria 24716
208 Ga0496126_0017048 3300048929 Bacteria 7247
209 Ga0496126_0047012 3300048929 Bacteria 3953
210 Ga0501034_0000769 3300049571 Bacteria 48050
211 Ga0501034_0001951 3300049571 Bacteria 26110
212 Ga0501034_0004242 3300049571 Bacteria 15992
213 Ga0501034_0132387 3300049571 Bacteria 2476
214 Ga0501034_0229140 3300049571 Bacteria 1807
215 Ga0501037_0045614 3300049573 Bacteria 3218
216 Ga0501037_0123508 3300049573 Bacteria 1860
217 Ga0501038_0004827 3300049574 Bacteria 12521
218 Ga0501038_0011758 3300049574 Bacteria 7987
219 Ga0501039_0457921 3300049575 Bacteria 1002
220 Ga0501040_0013489 3300049576 Bacteria 5372
221 Ga0501041_0003097 3300049577 Bacteria 9563
222 Ga0501042_0053065 3300049578 Bacteria 2892
223 Ga0501043_0020594 3300049579 Bacteria 5174
224 Ga0501046_0031959 3300049580 Bacteria 4264
225 Ga0501046_0325639 3300049580 Bacteria 1119
226 Ga0501047_0001025 3300049581 Bacteria 28116
227 Ga0501047_0004893 3300049581 Bacteria 12582
228 Ga0501047_0020828 3300049581 Bacteria 6299
229 Ga0501047_0403492 3300049581 Bacteria 1200
230 Ga0501067_0000372 3300049583 Bacteria 24399
231 Ga0501068_0002579 3300049584 Bacteria 9607
232 Ga0501069_0000632 3300049585 Bacteria 16281
233 Ga0501069_0152032 3300049585 Bacteria 1330
234 Ga0501070_0026729 3300049586 Bacteria 4841
235 Ga0501070_0030347 3300049586 Bacteria 4529
236 Ga0501070_0044552 3300049586 Bacteria 3691
237 Ga0501070_0111667 3300049586 Bacteria 2259
238 Ga0501070_0123293 3300049586 Bacteria 2141
239 Ga0501070_0292408 3300049586 Bacteria 1328
240 Ga0501071_0307730 3300049587 Bacteria 1202
241 Ga0501072_0011057 3300049588 Bacteria 6887
242 Ga0501073_0000512 3300049589 Bacteria 27182
243 Ga0501073_0012522 3300049589 Bacteria 6191
244 Ga0501073_0453878 3300049589 Bacteria 886
245 Ga0501074_0000176 3300049590 Bacteria 34551
246 Ga0501074_0006655 3300049590 Bacteria 8349
247 Ga0501074_0021319 3300049590 Bacteria 4705
248 Ga0501074_0031782 3300049590 Bacteria 3824
249 Ga0501074_0041137 3300049590 Bacteria 3347
250 Ga0501074_0080362 3300049590 Bacteria 2339
251 Ga0501075_0064882 3300049591 Bacteria 2754
252 Ga0501075_0421380 3300049591 Bacteria 1018
253 Ga0501076_0013012 3300049592 Bacteria 6229
254 Ga0501079_0006789 3300049741 Bacteria 8612
255 Ga0501079_0010025 3300049741 Bacteria 7193
256 Ga0501079_0078873 3300049741 Bacteria 2547
257 Ga0501080_0001384 3300049742 Bacteria 20314
258 Ga0501080_0002416 3300049742 Bacteria 16303
259 Ga0501080_0006222 3300049742 Bacteria 10714
260 Ga0501080_0009639 3300049742 Bacteria 8817
261 Ga0501080_0013065 3300049742 Bacteria 7624
262 Ga0501080_0059580 3300049742 Bacteria 3552
263 Ga0501080_0185130 3300049742 Bacteria 1915
264 Ga0501081_0005232 3300049743 Bacteria 8357
265 Ga0501081_0014727 3300049743 Bacteria 5159
266 Ga0501083_0109555 3300049744 Bacteria 1816
267 Ga0501035_0083201 3300049822 Bacteria 2824
268 Ga0501044_0004571 3300049823 Bacteria 15477
269 Ga0501044_0110398 3300049823 Bacteria 2759
270 nmdc:mga0k408_35723_c1 3300050493 Bacteria 2850
271 nmdc:mga05p37_277904_c1 3300050507 Bacteria 1998
272 nmdc:mga09592_357237_c1 3300050508 Bacteria 1264
273 nmdc:mga08y16_11256_c1 3300050511 Bacteria 9398
274 nmdc:mga08y16_173738_c1 3300050511 Bacteria 1942
275 nmdc:mga08y16_248549_c1 3300050511 Bacteria 1838
276 nmdc:mga0n895_5111_c1 3300050512 Bacteria 10901
277 nmdc:mga0rr50_177650_c1 3300050513 Bacteria 1739
278 nmdc:mga0a205_147_c1 3300050515 Bacteria 45502
279 Ga0501084_0043187 3300054114 Bacteria 3771
280 Ga0501084_0130690 3300054114 Bacteria 2114
281 Ga0501082_0032916 3300060353 Bacteria 4470
282 Ga0501082_0238631 3300060353 Bacteria 1582
283 Ga0530510_0028732 3300061734 Bacteria 3987
284 2525557017 2524614729 Bacteria 3091755
285 2547371827 2547132103 Bacteria 5115736
286 2630648613 2627854209 Bacteria 3093011
287 2643754503 2643221547 Bacteria 4740017
288 2843691870 2843690924 Bacteria 5169057
289 2885267470 2885266251 Bacteria 4796748
290 2932400291 2932398195 Bacteria 3847976
291 Ga0453683_0032790
292 rootL2_10323107
293 Ga0065707_10185744
294 Ga0070658_10017796
295 Ga0070683_100022594
296 Ga0070666_10000514
297 Ga0070680_100006325
298 Ga0068868_100106639
299 Ga0070660_100345163
300 Ga0070689_100302550
301 Ga0070691_10000587
302 Ga0070691_10006566
303 Ga0070691_10153503
304 Ga0070661_100239150
305 Ga0070669_100026442
306 Ga0070671_100202203
307 Ga0070674_100158145
308 Ga0070673_100013432
309 Ga0070659_100030140
310 Ga0070714_100076072
311 Ga0070713_100019351
312 Ga0070678_100026582
313 Ga0070681_10005503
314 Ga0070681_10011766
315 Ga0070681_10069608
316 Ga0070681_10255453
317 Ga0070679_100002889
318 Ga0070684_100017650
319 Ga0070684_100140592
320 Ga0068853_100117107
321 Ga0068855_100032108
322 Ga0068857_100241046
323 Ga0068857_100243732
324 Ga0068856_100097428
325 Ga0068852_100081089
326 Ga0068852_100092227
327 Ga0068859_100271984
328 Ga0068864_100138768
329 Ga0068863_100004533
330 Ga0068863_100030538
331 Ga0068858_100001960
332 Ga0068858_100153194
333 Ga0068858_100543284
334 Ga0068860_100098561
335 Ga0068862_100260921
336 Ga0081455_10082942
337 Ga0075367_10318482
338 Ga0075366_10020087
339 Ga0097621_100373797
340 Ga0068871_100105963
341 Ga0075428_100009257
342 Ga0075431_100478515
343 Ga0075433_10000772
344 Ga0075434_100000891
345 Ga0097620_100271976
346 Ga0105240_10018062
347 Ga0105240_10079762
348 Ga0111539_10039709
349 Ga0111539_10362026
350 Ga0105245_10260087
351 Ga0105238_10014577
352 Ga0105238_10194332
353 Ga0105238_10428842
354 Ga0105239_10013513
355 Ga0105239_10120562
356 Ga0105239_10229761
357 Ga0157373_10030845
358 Ga0157371_10026562
359 Ga0157370_10009458
360 Ga0157370_10059894
361 Ga0157369_10043604
362 Ga0157369_10130685
363 Ga0157374_10059969
364 Ga0157378_10000373
365 Ga0157378_10317631
366 Ga0163162_10243795
367 Ga0157372_10134206
368 Ga0157375_10388705
369 Ga0163163_10000394
370 Ga0163163_10005941
371 Ga0157380_10012208
372 Ga0182008_10256203
373 Ga0157379_10000982
374 Ga0157376_10123485
375 Ga0207426_1020244
376 Ga0207680_10023923
377 Ga0207647_10000313
378 Ga0207647_10135376
379 Ga0207705_10123591
380 Ga0207654_10023995
381 Ga0207707_10020113
382 Ga0207707_10170149
383 Ga0207707_10353806
384 Ga0207695_10060046
385 Ga0207695_10115144
386 Ga0207660_10061095
387 Ga0207660_10441015
388 Ga0207657_10095282
389 Ga0207657_10115788
390 Ga0207649_10166323
391 Ga0207681_10068483
392 Ga0207694_10128534
393 Ga0207659_10451039
394 Ga0207687_10097644
395 Ga0207700_10105975
396 Ga0207644_10284771
397 Ga0207644_10285067
398 Ga0207690_10037671
399 Ga0207706_10134697
400 Ga0207669_10310973
401 Ga0207704_10083221
402 Ga0207691_10213035
403 Ga0207661_10130374
404 Ga0207661_10273274
405 Ga0207667_10099188
406 Ga0207677_10059871
407 Ga0207703_10005454
408 Ga0207703_10450740
409 Ga0207639_10001322
410 Ga0207702_10009538
411 Ga0207702_10125775
412 Ga0207641_10007545
413 Ga0207676_10541155
414 Ga0207674_10232380
415 Ga0207674_10234163
416 Ga0207674_10485151
417 Ga0207683_10008055
418 Ga0207683_10033182
419 Ga0207698_10103012
420 Ga0209974_10025510
421 Ga0207428_10030835
422 Ga0207428_10288328
423 Ga0268266_10007529
424 Ga0268264_10121069
425 Ga0268264_10370844
426 Ga0265323_10000019
427 Ga0265323_10019493
428 Ga0265322_10000065
429 Ga0265322_10000336
430 Ga0265322_10034147
431 Ga0265338_10102839
432 Ga0265324_10026071
433 Ga0265330_10070603
434 Ga0265328_10020792
435 Ga0265340_10016306
436 Ga0265340_10145165
437 Ga0265331_10073954
438 Ga0265316_10001287
439 Ga0265316_10107585
440 Ga0265314_10092711
441 Ga0265342_10019930
442 Ga0265342_10027552
443 Ga0316576_10081239
444 Ga0316578_10156006
445 Ga0307516_10021342
446 Ga0307411_10237695
447 Ga0307507_10048512
448 Ga0373959_0020432
449 Ga0373926_0145761
450 Ga0373960_0058272
451 Ga0373931_0152061
452 Ga0373933_0202596
453 Ga0316584_0180740
454 Ga0395900_0143814
455 Ga0395898_0468147
456 Ga0395905_0509236
457 Ga0395901_0151081
458 Ga0395901_0152955
459 Ga0436365_1048902
460 Ga0436365_1190743
461 Ga0451853_0614861
462 Ga0450892_011504
463 Ga0451577_0000209
464 Ga0451577_0001146
465 Ga0451577_0008784
466 Ga0451577_0212676
467 Ga0451577_0535470
468 Ga0453683_0000636
469 Ga0453683_0004665
470 Ga0453683_0012662
471 Ga0453683_0067976
472 Ga0453683_0087965
473 Ga0453683_0104230
474 Ga0466963_0029918
475 Ga0453684_0000016
476 Ga0453684_0000362
477 Ga0453684_0021403
478 Ga0453684_0037866
479 Ga0453684_0057270
480 Ga0453684_0129305
481 Ga0453684_0215318
482 Ga0453684_0284734
483 Ga0451576_0007193
484 Ga0451576_0011436
485 Ga0451576_0018363
486 Ga0451576_0029193
487 Ga0451576_0149618
488 Ga0466967_0131997
489 Ga0466967_0248671
490 Ga0495654_0230190
491 Ga0496110_0008455
492 Ga0496113_0553459
493 Ga0496114_0032285
494 Ga0496115_0000123
495 Ga0496118_0024135
496 Ga0496124_0000003
497 Ga0496126_0002497
498 Ga0496126_0017048
499 Ga0496126_0047012
500 Ga0501034_0000769
501 Ga0501034_0001951
502 Ga0501034_0004242
503 Ga0501034_0132387
504 Ga0501034_0229140
505 Ga0501037_0045614
506 Ga0501037_0123508
507 Ga0501038_0004827
508 Ga0501038_0011758
509 Ga0501039_0457921
510 Ga0501040_0013489
511 Ga0501041_0003097
512 Ga0501042_0053065
513 Ga0501043_0020594
514 Ga0501046_0031959
515 Ga0501046_0325639
516 Ga0501047_0001025
517 Ga0501047_0004893
518 Ga0501047_0020828
519 Ga0501047_0403492
520 Ga0501067_0000372
521 Ga0501068_0002579
522 Ga0501069_0000632
523 Ga0501069_0152032
524 Ga0501070_0026729
525 Ga0501070_0030347
526 Ga0501070_0044552
527 Ga0501070_0111667
528 Ga0501070_0123293
529 Ga0501070_0292408
530 Ga0501071_0307730
531 Ga0501072_0011057
532 Ga0501073_0000512
533 Ga0501073_0012522
534 Ga0501073_0453878
535 Ga0501074_0000176
536 Ga0501074_0006655
537 Ga0501074_0021319
538 Ga0501074_0031782
539 Ga0501074_0041137
540 Ga0501074_0080362
541 Ga0501075_0064882
542 Ga0501075_0421380
543 Ga0501076_0013012
544 Ga0501079_0006789
545 Ga0501079_0010025
546 Ga0501079_0078873
547 Ga0501080_0001384
548 Ga0501080_0002416
549 Ga0501080_0006222
550 Ga0501080_0009639
551 Ga0501080_0013065
552 Ga0501080_0059580
553 Ga0501080_0185130
554 Ga0501081_0005232
555 Ga0501081_0014727
556 Ga0501083_0109555
557 Ga0501035_0083201
558 Ga0501044_0004571
559 Ga0501044_0110398
560 nmdc:mga0k408_35723_c1
561 nmdc:mga05p37_277904_c1
562 nmdc:mga09592_357237_c1
563 nmdc:mga08y16_11256_c1
564 nmdc:mga08y16_173738_c1
565 nmdc:mga08y16_248549_c1
566 nmdc:mga0n895_5111_c1
567 nmdc:mga0rr50_177650_c1
568 nmdc:mga0a205_147_c1
569 Ga0501084_0043187
570 Ga0501084_0130690
571 Ga0501082_0032916
572 Ga0501082_0238631
573 Ga0530510_0028732
574 2525557017
575 2547371827
576 2630648613
577 2643754503
578 2843691870
579 2885267470
580 2932400291

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02900

LigB

Catalytic LigB subunit of aromatic ring-opening dioxygenase

52

295

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pw6-assembly1.cif.gz_A-2 crystal structure of uncharacterized protein jw3007 from escherichia coli k12 0.9187 1 252
2pw6-assembly1.cif.gz_A-2 crystal structure of uncharacterized protein jw3007 from escherichia coli k12 0.9114 1 252
8iq8-assembly1.cif.gz_D crystal structure of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (dhpao) from acinetobacter baumannii 0.7805 1 255
8iq8-assembly1.cif.gz_D crystal structure of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (dhpao) from acinetobacter baumannii 0.7778 1 255
1bou-assembly1.cif.gz_D three-dimensional structure of ligab 0.7591 2 253
ID Description Score Start End Superfamily
af_P24197_1_271_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.9724 1 252 3.40.830.10
af_P24197_1_271_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.9575 1 252 3.40.830.10
af_I1MQB9_2_262_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.956 2 252 3.40.830.10
af_I1MQB9_2_262_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.9378 2 252 3.40.830.10
af_Q54W77_1_267_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.9256 1 252 3.40.830.10
ID Description Score Start End GO Terms
AF-A3XL19-F1-model_v4 Extradiol ring-cleavage dioxygenase class III enzyme subunit B domain-containing protein 0.9944 1 252 GO:0008198
GO:0008270
GO:0016701
AF-A0A2G4JT63-F1-model_v4 deleted 0.9938 5 133
AF-A0A7G2T9E6-F1-model_v4 4,5-DOPA dioxygenase extradiol 0.9927 1 252 GO:0008198
GO:0008270
GO:0016701
GO:0051213
AF-A0A258F8P4-F1-model_v4 4,5-DOPA dioxygenase extradiol 0.992 1 254 GO:0008198
GO:0008270
GO:0016701
GO:0051213
AF-A0A533TEC6-F1-model_v4 deleted 0.9914 1 154

Map