F389952

General Info

Members Datasets Scaffolds Average Seq Length
290 194 278 551

Family's Representative Sequence

Representative Sequence 3300046506|Ga0495583_0001178|Ga0495583_0001178_19099_20931
Length 610
Sequence MRHSLFFGFEYRREIARARLGQSCRRSIAFRRRHAVSTRQLHRYHRGNHRGARRVDTAERTEQPQRGGAFEPLRETVFRRIWLTSVLSNFGQLILGVGAAWEMTRLTSSPSLVALVQTALMLPLMLVAVPAGALADMFDRRRIAMTGLAFSAACGALLTTLAWLGLTTPWVLLAFCSLIGAGVALYSPSWQSSISEQVPPQQLPAAIALGSISYNVARSFGPAVGGLIVLAAGAKSAFAINALCYLPLLVAFYLWNRRHVPSRLPPERIDRAIITGARYALHSGSVRTVLVRAFVFGLAGASASALAPLIAKNMLGGNASIYGLLLGSSGVGAVTGALAVGWISHRMSNERVCRVTALVGAAALLLVGLSHSVPLTCVGLFVAGAANIITIASFNISVQLAAPRWVTARSLSLFSSALTGGIAIGSLLWGVVASTWTVEVAVLASAAALGATPLLALLFPLPHSVLTGVQAVELNHEPEVAMALTMRSGPVVIEVDYRVGADLARPFYDAMRKVQRSRMRNGAFNWSLSRDIGDPDLWTERYQFPTWSDYLRTRERFTQADLDAQAAADSFIAEGVIKRVRRRLERPFGSVRWRADSPDPQQGTIGYLGP

Samples

Sample ID Description Type Environment
1 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
2 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
3 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
4 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
5 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
6 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
7 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
8 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
9 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
10 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
11 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
12 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
13 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
14 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
15 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
16 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
17 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
18 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
19 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
20 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
21 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
22 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
23 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
24 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
25 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
26 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
27 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
28 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
44 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
45 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
62 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
63 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
89 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
93 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
94 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
95 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
96 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
97 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
98 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
99 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
100 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
101 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
102 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
103 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
104 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
107 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
108 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
109 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
110 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
111 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
112 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
113 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
114 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
115 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
116 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
117 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
118 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
119 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
120 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
121 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
122 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
123 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
124 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
125 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
126 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
127 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
128 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
129 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
130 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
131 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
132 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
133 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
134 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
135 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
136 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
137 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
138 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
139 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
140 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
141 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
142 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
143 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
144 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
145 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
146 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
147 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
148 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
149 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
150 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
151 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
152 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
159 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
160 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
161 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
162 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
165 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
166 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
167 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
168 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
169 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
170 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
171 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
172 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
173 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
174 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
175 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
176 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
177 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
178 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
179 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
180 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
181 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
182 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
183 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
184 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
185 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
186 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
187 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
188 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
189 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
190 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
191 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
192 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
193 3300053725 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere Metagenome Endosphere
194 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.86
Metatranscriptomes 0
Isolates 4.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.24
Nodule 0.34
Rhizoplane 0
Rhizosphere 73.79
Stem 0
Stem Tuber 0
Unclassified 8.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24749J21850_1000155 3300002076 Bacteria 10952
2 JGI24751J29686_10000110 3300002459 Bacteria 43210
3 JGI24751J29686_10000300 3300002459 Bacteria 18715
4 JGI25165J46597_1000156 3300003214 Bacteria 109696
5 rootH2_10024911 3300003320 Bacteria 34799
6 rootL2_10033575 3300003322 Bacteria 7749
7 Ga0065707_10086312 3300005295 Bacteria 5538
8 Ga0070683_100075390 3300005329 Bacteria 3152
9 Ga0070670_100000031 3300005331 Bacteria 159070
10 Ga0070670_100000237 3300005331 Bacteria 49913
11 Ga0070670_100018342 3300005331 Bacteria 6004
12 Ga0070666_10000073 3300005335 Bacteria 74485
13 Ga0070680_100004941 3300005336 Bacteria 10040
14 Ga0070680_100009105 3300005336 Bacteria 7614
15 Ga0070660_100002091 3300005339 Bacteria 13777
16 Ga0070661_100014170 3300005344 Bacteria 5615
17 Ga0070668_100000233 3300005347 Bacteria 36341
18 Ga0070668_100002541 3300005347 Bacteria 13430
19 Ga0070668_100013996 3300005347 Bacteria 5998
20 Ga0070668_100015446 3300005347 Bacteria 5707
21 Ga0070669_100000026 3300005353 Bacteria 170346
22 Ga0070669_100000219 3300005353 Bacteria 47677
23 Ga0070671_100000020 3300005355 Bacteria 127483
24 Ga0070667_100000272 3300005367 Bacteria 58738
25 Ga0070667_100005031 3300005367 Bacteria 11065
26 Ga0070667_100019478 3300005367 Bacteria 5630
27 Ga0070667_100028098 3300005367 Bacteria 4682
28 Ga0070679_100008793 3300005530 Bacteria 9525
29 Ga0070684_100004519 3300005535 Bacteria 10592
30 Ga0068853_100000275 3300005539 Bacteria 36242
31 Ga0070665_100002005 3300005548 Bacteria 22902
32 Ga0068855_100025613 3300005563 Bacteria 7056
33 Ga0068855_100065084 3300005563 Bacteria 4250
34 Ga0068857_100022032 3300005577 Bacteria 5607
35 Ga0068857_100043882 3300005577 Bacteria 3966
36 Ga0068857_100125574 3300005577 Bacteria 2312
37 Ga0068857_100161322 3300005577 Unclassified 2034
38 Ga0068856_100052005 3300005614 Bacteria 4039
39 Ga0068859_100003006 3300005617 Bacteria 17097
40 Ga0068859_100004204 3300005617 Bacteria 14700
41 Ga0068859_100083572 3300005617 Bacteria 3236
42 Ga0068864_100000075 3300005618 Bacteria 108554
43 Ga0068864_100000692 3300005618 Bacteria 28225
44 Ga0068864_100000765 3300005618 Bacteria 27047
45 Ga0068861_100000481 3300005719 Bacteria 23219
46 Ga0068861_100015816 3300005719 Bacteria 5327
47 Ga0068863_100000135 3300005841 Bacteria 78221
48 Ga0068863_100017125 3300005841 Bacteria 6950
49 Ga0068858_100001172 3300005842 Bacteria 27200
50 Ga0068860_100000526 3300005843 Bacteria 46691
51 Ga0068860_100002967 3300005843 Bacteria 17516
52 Ga0068862_100000006 3300005844 Bacteria 346828
53 Ga0068862_100000459 3300005844 Bacteria 44048
54 Ga0068862_100000826 3300005844 Bacteria 30644
55 Ga0068862_100024642 3300005844 Bacteria 5050
56 Ga0081538_10022183 3300005981 Bacteria 4608
57 Ga0075368_10005286 3300006042 Bacteria 4432
58 Ga0075367_10004741 3300006178 Bacteria 6689
59 Ga0075366_10008809 3300006195 Bacteria 5620
60 Ga0075366_10045026 3300006195 Bacteria 2615
61 Ga0075366_10049780 3300006195 Bacteria 2487
62 Ga0075430_100045244 3300006846 Bacteria 3719
63 Ga0075431_100069058 3300006847 Unclassified 3646
64 Ga0097620_100003006 3300006931 Bacteria 17097
65 Ga0097620_100004204 3300006931 Bacteria 14700
66 Ga0097620_100083572 3300006931 Bacteria 3236
67 Ga0079104_1013154 3300006946 Bacteria 2565
68 Ga0105240_10002943 3300009093 Bacteria 26851
69 Ga0105240_10011399 3300009093 Bacteria 12384
70 Ga0105247_10002240 3300009101 Bacteria 13301
71 Ga0105248_10001039 3300009177 Bacteria 30716
72 Ga0105248_10077127 3300009177 Bacteria 3746
73 Ga0105248_10128956 3300009177 Bacteria 2853
74 Ga0105237_10006512 3300009545 Bacteria 12932
75 Ga0105237_10023489 3300009545 Bacteria 6316
76 Ga0105249_10001217 3300009553 Bacteria 22698
77 Ga0105249_10001251 3300009553 Bacteria 22310
78 Ga0157373_10048613 3300013100 Bacteria 3024
79 Ga0157369_10006724 3300013105 Bacteria 13270
80 Ga0163162_10001423 3300013306 Bacteria 22251
81 Ga0157380_10088044 3300014326 Bacteria 2554
82 Ga0157379_10020954 3300014968 Bacteria 5785
83 Ga0157379_10041647 3300014968 Bacteria 4100
84 Ga0163161_10000723 3300017792 Bacteria 25974
85 Ga0209233_1000213 3300025261 Bacteria 109881
86 Ga0207656_10014629 3300025321 Bacteria 3027
87 Ga0207710_10001189 3300025900 Bacteria 13205
88 Ga0207680_10000188 3300025903 Bacteria 29957
89 Ga0207680_10041782 3300025903 Bacteria 2678
90 Ga0207707_10004049 3300025912 Bacteria 12993
91 Ga0207695_10009793 3300025913 Bacteria 11782
92 Ga0207671_10009355 3300025914 Bacteria 8197
93 Ga0207671_10025764 3300025914 Bacteria 4414
94 Ga0207660_10007021 3300025917 Bacteria 7294
95 Ga0207660_10007715 3300025917 Bacteria 6964
96 Ga0207657_10003634 3300025919 Bacteria 16422
97 Ga0207649_10021764 3300025920 Bacteria 3697
98 Ga0207652_10002638 3300025921 Bacteria 15043
99 Ga0207681_10000001 3300025923 Bacteria 1105841
100 Ga0207681_10000114 3300025923 Bacteria 67811
101 Ga0207694_10019213 3300025924 Bacteria 5165
102 Ga0207650_10000055 3300025925 Bacteria 158325
103 Ga0207650_10000136 3300025925 Bacteria 89925
104 Ga0207650_10009577 3300025925 Bacteria 6625
105 Ga0207644_10000034 3300025931 Bacteria 132239
106 Ga0207711_10003426 3300025941 Bacteria 13719
107 Ga0207711_10041211 3300025941 Bacteria 3931
108 Ga0207711_10062850 3300025941 Bacteria 3204
109 Ga0207711_10128954 3300025941 Bacteria 2266
110 Ga0207661_10055791 3300025944 Bacteria 3170
111 Ga0207712_10000900 3300025961 Bacteria 21552
112 Ga0207712_10029214 3300025961 Bacteria 3696
113 Ga0207668_10000067 3300025972 Bacteria 83712
114 Ga0207668_10000280 3300025972 Bacteria 33527
115 Ga0207668_10000360 3300025972 Bacteria 29295
116 Ga0207658_10000379 3300025986 Bacteria 43390
117 Ga0207658_10002941 3300025986 Bacteria 12200
118 Ga0207658_10004533 3300025986 Bacteria 9648
119 Ga0207658_10019105 3300025986 Bacteria 4739
120 Ga0207703_10000584 3300026035 Bacteria 37152
121 Ga0207639_10003236 3300026041 Bacteria 10956
122 Ga0207639_10083570 3300026041 Bacteria 2534
123 Ga0207641_10000770 3300026088 Bacteria 34326
124 Ga0207641_10013516 3300026088 Bacteria 6697
125 Ga0207641_10049212 3300026088 Bacteria 3560
126 Ga0207676_10000004 3300026095 Bacteria 725417
127 Ga0207676_10000499 3300026095 Bacteria 33023
128 Ga0207676_10001576 3300026095 Bacteria 16764
129 Ga0207674_10002207 3300026116 Bacteria 24665
130 Ga0207674_10003708 3300026116 Bacteria 18660
131 Ga0207674_10057516 3300026116 Bacteria 3942
132 Ga0207674_10067852 3300026116 Bacteria 3590
133 Ga0207675_100000087 3300026118 Bacteria 72097
134 Ga0207675_100000953 3300026118 Bacteria 28848
135 Ga0209813_10000010 3300027866 Bacteria 97592
136 Ga0268266_10000221 3300028379 Bacteria 99332
137 Ga0268266_10003019 3300028379 Bacteria 17299
138 Ga0268265_10000002 3300028380 Bacteria 1035381
139 Ga0268265_10000043 3300028380 Bacteria 186081
140 Ga0268265_10015713 3300028380 Bacteria 5185
141 Ga0268264_10000192 3300028381 Bacteria 126749
142 Ga0268264_10000297 3300028381 Bacteria 82093
143 Ga0265334_10000087 3300028573 Bacteria 66703
144 Ga0307515_10013676 3300028794 Bacteria 15125
145 Ga0307511_10000374 3300030521 Bacteria 47666
146 Ga0307513_10000856 3300031456 Bacteria 44279
147 Ga0307513_10015117 3300031456 Bacteria 9368
148 Ga0307513_10021672 3300031456 Bacteria 7578
149 Ga0307509_10000048 3300031507 Bacteria 167101
150 Ga0307408_100016481 3300031548 Bacteria 4933
151 Ga0307508_10000103 3300031616 Bacteria 100310
152 Ga0307508_10022202 3300031616 Bacteria 5768
153 Ga0307516_10000023 3300031730 Bacteria 190971
154 Ga0307405_10053003 3300031731 Bacteria 2525
155 Ga0307410_10010349 3300031852 Bacteria 5278
156 Ga0307406_10078897 3300031901 Bacteria 2182
157 Ga0307412_10011481 3300031911 Bacteria 5135
158 Ga0307412_10041368 3300031911 Bacteria 2986
159 Ga0307409_100010454 3300031995 Bacteria 5774
160 Ga0307416_100035653 3300032002 Bacteria 3803
161 Ga0307510_10000001 3300033180 Bacteria 1172244
162 Ga0307510_10001251 3300033180 Bacteria 27621
163 Ga0373934_0002231 3300035086 Bacteria 7121
164 Ga0373940_0005542 3300035088 Bacteria 2742
165 Ga0373936_0018198 3300035113 Unclassified 2712
166 Ga0373953_0000349 3300035117 Bacteria 12481
167 Ga0373954_0001799 3300035118 Bacteria 8833
168 Ga0373957_0003969 3300035120 Bacteria 4446
169 Ga0373955_0000773 3300035172 Bacteria 13728
170 Ga0373933_0004096 3300035724 Bacteria 8031
171 Ga0373937_0022531 3300036401 Bacteria 5664
172 Ga0395900_0063771 3300037418 Bacteria 3787
173 Ga0395898_0086132 3300037466 Bacteria 3028
174 Ga0495592_0001577 3300046454 Bacteria 15930
175 Ga0495629_0001677 3300046459 Bacteria 17395
176 Ga0495638_0000079 3300046460 Bacteria 157488
177 Ga0495638_0006821 3300046460 Bacteria 8244
178 Ga0495638_0012293 3300046460 Bacteria 5872
179 Ga0495638_0029151 3300046460 Bacteria 3559
180 Ga0495653_0011419 3300046463 Bacteria 7259
181 Ga0495650_0000163 3300046471 Bacteria 148569
182 Ga0495583_0000333 3300046506 Bacteria 74698
183 Ga0495583_0001178 3300046506 Bacteria 28217
184 Ga0495608_0003446 3300046511 Bacteria 11332
185 Ga0495616_0000032 3300046513 Bacteria 130692
186 Ga0495652_0005016 3300046529 Bacteria 12542
187 Ga0495640_0005904 3300046533 Bacteria 9710
188 Ga0495587_0013802 3300046536 Bacteria 5076
189 Ga0495587_0024557 3300046536 Bacteria 3692
190 Ga0495597_0019234 3300046542 Bacteria 3198
191 Ga0495622_0026952 3300046557 Bacteria 2681
192 Ga0495622_0049931 3300046557 Bacteria 1942
193 Ga0495633_0055340 3300046558 Bacteria 1865
194 Ga0495667_0000528 3300046559 Bacteria 24459
195 Ga0495668_0007996 3300046616 Bacteria 6665
196 Ga0495625_0001900 3300046660 Bacteria 23625
197 Ga0495625_0053793 3300046660 Bacteria 2878
198 Ga0495635_0000628 3300046663 Bacteria 22744
199 Ga0495599_0000880 3300046678 Bacteria 16742
200 Ga0495623_0028694 3300046679 Bacteria 3579
201 Ga0495646_0004082 3300046680 Bacteria 9161
202 Ga0495671_0014596 3300046692 Bacteria 4222
203 Ga0495649_0009996 3300046694 Bacteria 5609
204 Ga0495600_0000175 3300046809 Bacteria 37583
205 Ga0495600_0007023 3300046809 Bacteria 6878
206 Ga0495604_0001847 3300047317 Bacteria 17260
207 Ga0495680_0011957 3300047322 Bacteria 7660
208 Ga0495675_0004940 3300047444 Bacteria 8121
209 Ga0495677_0018997 3300047445 Bacteria 2492
210 Ga0495684_0000457 3300047471 Bacteria 33378
211 Ga0495686_0016552 3300047472 Bacteria 4998
212 Ga0495593_0002794 3300047673 Bacteria 10513
213 Ga0495593_0011251 3300047673 Bacteria 5143
214 Ga0495602_0017840 3300048088 Bacteria 7103
215 Ga0496117_0044352 3300048920 Bacteria 3222
216 Ga0496118_0030042 3300048921 Bacteria 4545
217 Ga0496119_0028252 3300048922 Bacteria 3832
218 Ga0496121_0000152 3300048924 Bacteria 150767
219 Ga0496121_0000839 3300048924 Bacteria 55686
220 Ga0496121_0001319 3300048924 Bacteria 42498
221 Ga0501038_0001439 3300049574 Bacteria 21850
222 Ga0501043_0019474 3300049579 Bacteria 5326
223 Ga0501046_0065883 3300049580 Bacteria 2825
224 Ga0501047_0002477 3300049581 Bacteria 17626
225 Ga0501223_000081 3300049663 Bacteria 28947
226 Ga0501223_000226 3300049663 Bacteria 14459
227 Ga0501224_000015 3300049664 Bacteria 90971
228 Ga0501233_000032 3300049668 Bacteria 17972
229 Ga0501235_001562 3300049669 Bacteria 4906
230 Ga0501225_0000038 3300049705 Bacteria 45168
231 Ga0501225_0000225 3300049705 Bacteria 17881
232 Ga0501044_0133870 3300049823 Bacteria 2471
233 Ga0501226_000027 3300049853 Bacteria 89557
234 nmdc:mga0k408_12375_c1 3300050493 Bacteria 4664
235 nmdc:mga0k408_6377_c1 3300050493 Bacteria 6297
236 nmdc:mga06z11_68_c1 3300050494 Bacteria 42759
237 nmdc:mga04h51_36_c1 3300050495 Bacteria 45993
238 Ga0495601_0012595 3300053077 Bacteria 5071
239 Ga0500635_0000223 3300053080 Bacteria 25999
240 Ga0495595_0001764 3300053084 Bacteria 8448
241 Ga0495619_0004433 3300053085 Bacteria 8952
242 Ga0500643_000691 3300053087 Bacteria 22527
243 Ga0500643_005359 3300053087 Bacteria 5543
244 Ga0500647_0028551 3300053091 Bacteria 2641
245 Ga0500651_0021623 3300053093 Bacteria 4012
246 Ga0500566_0008225 3300053094 Bacteria 6175
247 Ga0500555_001950 3300053103 Bacteria 6113
248 Ga0500569_010183 3300053109 Bacteria 2206
249 Ga0500572_000099 3300053111 Bacteria 28590
250 Ga0500595_000546 3300053119 Bacteria 22591
251 Ga0500595_002070 3300053119 Bacteria 10248
252 Ga0500597_001690 3300053120 Bacteria 5744
253 Ga0500607_001146 3300053121 Bacteria 24665
254 Ga0500607_050813 3300053121 Bacteria 2207
255 Ga0500608_000862 3300053122 Bacteria 10960
256 Ga0500614_001143 3300053123 Bacteria 6520
257 Ga0500652_018513 3300053131 Bacteria 2573
258 Ga0500655_000419 3300053133 Bacteria 8909
259 Ga0500559_0000238 3300053136 Bacteria 43775
260 Ga0500559_0017908 3300053136 Bacteria 2994
261 Ga0500559_0018245 3300053136 Bacteria 2965
262 Ga0500559_0018813 3300053136 Bacteria 2918
263 Ga0500588_0000679 3300053146 Bacteria 5703
264 Ga0500622_0002944 3300053156 Bacteria 11814
265 Ga0500622_0004088 3300053156 Bacteria 9356
266 Ga0500622_0028850 3300053156 Bacteria 2920
267 Ga0500624_000003 3300053157 Bacteria 253364
268 Ga0500624_000105 3300053157 Bacteria 40162
269 Ga0500624_000127 3300053157 Bacteria 33962
270 Ga0500624_001775 3300053157 Bacteria 3155
271 Ga0500636_0000529 3300053177 Bacteria 20761
272 Ga0500636_0000952 3300053177 Bacteria 15562
273 Ga0500637_0000045 3300053178 Bacteria 44699
274 Ga0500637_0005144 3300053178 Bacteria 6304
275 Ga0500570_000688 3300053724 Bacteria 13841
276 Ga0500576_022150 3300053725 Bacteria 2899
277 Ga0500596_000092 3300053735 Bacteria 12251
278 Ga0500596_003987 3300053735 Bacteria 2746

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003320 rootH2_10024911 rootH2_1002491135 433
2 3300026116 Ga0207674_10057516 Ga0207674_100575162 453
3 3300035088 Ga0373940_0005542 Ga0373940_0005542_1232_2728 483
4 3300053136 Ga0500559_0018245 Ga0500559_0018245_843_2516 492
5 3300047673 Ga0495593_0011251 Ga0495593_0011251_3624_5123 494
6 3300053121 Ga0500607_050813 Ga0500607_050813_24_1550 503
7 3300046460 Ga0495638_0012293 Ga0495638_0012293_3128_4723 513
8 3300048924 Ga0496121_0000839 Ga0496121_0000839_10351_12012 515
9 3300006195 Ga0075366_10045026 Ga0075366_100450262 517
10 3300050493 nmdc:mga0k408_12375_c1 nmdc:mga0k408_12375_c1_2939_4621 517
11 3300053111 Ga0500572_000099 Ga0500572_000099_10944_12629 517
12 3300053136 Ga0500559_0000238 Ga0500559_0000238_4197_5882 517
13 3300053735 Ga0500596_003987 Ga0500596_003987_493_2178 517
14 3300005347 Ga0070668_100015446 Ga0070668_1000154463 520
15 3300003322 rootL2_10033575 rootL2_100335752 521
16 3300049574 Ga0501038_0001439 Ga0501038_0001439_3000_4589 521
17 3300017792 Ga0163161_10000723 Ga0163161_1000072317 522
18 3300013100 Ga0157373_10048613 Ga0157373_100486132 524
19 3300053156 Ga0500622_0004088 Ga0500622_0004088_6739_8334 526
20 3300031456 Ga0307513_10000856 Ga0307513_1000085620 527
21 3300035086 Ga0373934_0002231 Ga0373934_0002231_5318_7003 527
22 3300035117 Ga0373953_0000349 Ga0373953_0000349_8468_10153 527
23 3300035118 Ga0373954_0001799 Ga0373954_0001799_6992_8677 527
24 3300035120 Ga0373957_0003969 Ga0373957_0003969_2477_4162 527
25 3300035172 Ga0373955_0000773 Ga0373955_0000773_7784_9469 527
26 3300035724 Ga0373933_0004096 Ga0373933_0004096_3232_4917 527
27 3300036401 Ga0373937_0022531 Ga0373937_0022531_3685_5370 527
28 3300046454 Ga0495592_0001577 Ga0495592_0001577_5098_6783 527
29 3300046459 Ga0495629_0001677 Ga0495629_0001677_6715_8400 527
30 3300046463 Ga0495653_0011419 Ga0495653_0011419_3342_5027 527
31 3300046511 Ga0495608_0003446 Ga0495608_0003446_6462_8147 527
32 3300046529 Ga0495652_0005016 Ga0495652_0005016_3813_5498 527
33 3300046533 Ga0495640_0005904 Ga0495640_0005904_677_2362 527
34 3300046536 Ga0495587_0013802 Ga0495587_0013802_2158_3843 527
35 3300046559 Ga0495667_0000528 Ga0495667_0000528_17535_19220 527
36 3300046663 Ga0495635_0000628 Ga0495635_0000628_9882_11567 527
37 3300046678 Ga0495599_0000880 Ga0495599_0000880_6915_8600 527
38 3300046679 Ga0495623_0028694 Ga0495623_0028694_1472_3157 527
39 3300046680 Ga0495646_0004082 Ga0495646_0004082_6482_8167 527
40 3300046809 Ga0495600_0007023 Ga0495600_0007023_4260_5945 527
41 3300047317 Ga0495604_0001847 Ga0495604_0001847_8985_10670 527
42 3300047322 Ga0495680_0011957 Ga0495680_0011957_2163_3848 527
43 3300047444 Ga0495675_0004940 Ga0495675_0004940_2177_3862 527
44 3300047471 Ga0495684_0000457 Ga0495684_0000457_30087_31772 527
45 3300047673 Ga0495593_0002794 Ga0495593_0002794_5142_6827 527
46 3300048088 Ga0495602_0017840 Ga0495602_0017840_2233_3918 527
47 3300053077 Ga0495601_0012595 Ga0495601_0012595_1908_3593 527
48 3300053084 Ga0495595_0001764 Ga0495595_0001764_1375_3060 527
49 3300053085 Ga0495619_0004433 Ga0495619_0004433_6718_8403 527
50 3300005329 Ga0070683_100075390 Ga0070683_1000753901 528
51 3300005336 Ga0070680_100009105 Ga0070680_1000091053 528
52 3300005339 Ga0070660_100002091 Ga0070660_1000020916 528
53 3300005344 Ga0070661_100014170 Ga0070661_1000141704 528
54 3300005535 Ga0070684_100004519 Ga0070684_1000045198 528
55 3300005563 Ga0068855_100025613 Ga0068855_1000256134 528
56 3300005577 Ga0068857_100022032 Ga0068857_1000220322 528
57 3300009093 Ga0105240_10002943 Ga0105240_1000294313 528
58 3300009545 Ga0105237_10023489 Ga0105237_100234894 528
59 3300013105 Ga0157369_10006724 Ga0157369_1000672413 528
60 3300025321 Ga0207656_10014629 Ga0207656_100146292 528
61 3300025912 Ga0207707_10004049 Ga0207707_100040493 528
62 3300025914 Ga0207671_10025764 Ga0207671_100257642 528
63 3300025917 Ga0207660_10007715 Ga0207660_100077156 528
64 3300025919 Ga0207657_10003634 Ga0207657_1000363411 528
65 3300025920 Ga0207649_10021764 Ga0207649_100217643 528
66 3300025921 Ga0207652_10002638 Ga0207652_100026385 528
67 3300025944 Ga0207661_10055791 Ga0207661_100557911 528
68 3300026041 Ga0207639_10083570 Ga0207639_100835702 528
69 3300026116 Ga0207674_10003708 Ga0207674_1000370813 528
70 3300031456 Ga0307513_10021672 Ga0307513_100216724 529
71 3300031731 Ga0307405_10053003 Ga0307405_100530032 529
72 3300049580 Ga0501046_0065883 Ga0501046_0065883_1049_2719 529
73 3300005336 Ga0070680_100004941 Ga0070680_1000049418 531
74 3300005530 Ga0070679_100008793 Ga0070679_1000087933 531
75 3300005841 Ga0068863_100017125 Ga0068863_1000171253 531
76 3300025917 Ga0207660_10007021 Ga0207660_100070213 531
77 3300026088 Ga0207641_10013516 Ga0207641_100135163 531
78 3300009093 Ga0105240_10011399 Ga0105240_100113997 533
79 3300025913 Ga0207695_10009793 Ga0207695_1000979311 533
80 3300046694 Ga0495649_0009996 Ga0495649_0009996_898_2568 533
81 3300053178 Ga0500637_0005144 Ga0500637_0005144_243_1913 533
82 3300006847 Ga0075431_100069058 Ga0075431_1000690582 534
83 3300053103 Ga0500555_001950 Ga0500555_001950_1915_3582 535
84 3300031548 Ga0307408_100016481 Ga0307408_1000164812 536
85 3300031852 Ga0307410_10010349 Ga0307410_100103493 536
86 3300031901 Ga0307406_10078897 Ga0307406_100788972 536
87 3300031911 Ga0307412_10041368 Ga0307412_100413682 536
88 3300031995 Ga0307409_100010454 Ga0307409_1000104541 536
89 3300032002 Ga0307416_100035653 Ga0307416_1000356532 536
90 3300037418 Ga0395900_0063771 Ga0395900_0063771_691_2364 536
91 3300035113 Ga0373936_0018198 Ga0373936_0018198_326_1996 537
92 3300037466 Ga0395898_0086132 Ga0395898_0086132_1349_3004 537
93 3300002459 JGI24751J29686_10000300 JGI24751J29686_1000030013 538
94 3300005981 Ga0081538_10022183 Ga0081538_100221832 538
95 3300006946 Ga0079104_1013154 Ga0079104_10131542 539
96 3300046513 Ga0495616_0000032 Ga0495616_0000032_87432_89057 539
97 3300046616 Ga0495668_0007996 Ga0495668_0007996_460_2085 539
98 iso_pu_bacteria 2919709256 2919710258 539
99 3300049579 Ga0501043_0019474 Ga0501043_0019474_1640_3307 541
100 3300049581 Ga0501047_0002477 Ga0501047_0002477_13816_15483 541
101 3300049823 Ga0501044_0133870 Ga0501044_0133870_791_2458 541
102 3300006195 Ga0075366_10008809 Ga0075366_100088092 542
103 3300050493 nmdc:mga0k408_6377_c1 nmdc:mga0k408_6377_c1_1698_3368 542
104 3300025924 Ga0207694_10019213 Ga0207694_100192132 543
105 3300053087 Ga0500643_005359 Ga0500643_005359_556_2226 543
106 3300049663 Ga0501223_000226 Ga0501223_000226_9492_11183 544
107 3300049705 Ga0501225_0000225 Ga0501225_0000225_13264_14955 544
108 iso_pu_bacteria 2512564014 2512641772 545
109 iso_pu_bacteria 2889033259 2889035419 545
110 3300053136 Ga0500559_0018813 Ga0500559_0018813_1052_2881 546
111 3300046460 Ga0495638_0029151 Ga0495638_0029151_1217_2884 547
112 3300048921 Ga0496118_0030042 Ga0496118_0030042_884_2557 547
113 3300048924 Ga0496121_0001319 Ga0496121_0001319_28406_30079 547
114 3300030521 Ga0307511_10000374 Ga0307511_1000037416 548
115 iso_pu_bacteria 2808606401 2809064017 548
116 iso_pu_bacteria 2808606404 2809079985 548
117 iso_pu_bacteria 2808606405 2809084350 548
118 iso_pu_bacteria 2880518877 2880522842 548
119 3300006042 Ga0075368_10005286 Ga0075368_100052862 549
120 3300006178 Ga0075367_10004741 Ga0075367_100047412 549
121 3300027866 Ga0209813_10000010 Ga0209813_1000001068 549
122 3300031507 Ga0307509_10000048 Ga0307509_10000048114 549
123 3300046557 Ga0495622_0049931 Ga0495622_0049931_92_1789 549
124 3300050494 nmdc:mga06z11_68_c1 nmdc:mga06z11_68_c1_16703_18367 549
125 3300050495 nmdc:mga04h51_36_c1 nmdc:mga04h51_36_c1_16682_18346 549
126 3300003214 JGI25165J46597_1000156 JGI25165J46597_100015615 550
127 3300005331 Ga0070670_100000237 Ga0070670_10000023731 550
128 3300005331 Ga0070670_100018342 Ga0070670_1000183425 550
129 3300005335 Ga0070666_10000073 Ga0070666_1000007358 550
130 3300005347 Ga0070668_100000233 Ga0070668_10000023318 550
131 3300005347 Ga0070668_100002541 Ga0070668_1000025419 550
132 3300005347 Ga0070668_100013996 Ga0070668_1000139966 550
133 3300005353 Ga0070669_100000219 Ga0070669_10000021925 550
134 3300005355 Ga0070671_100000020 Ga0070671_100000020110 550
135 3300005367 Ga0070667_100000272 Ga0070667_10000027224 550
136 3300005367 Ga0070667_100005031 Ga0070667_1000050312 550
137 3300005367 Ga0070667_100028098 Ga0070667_1000280983 550
138 3300005539 Ga0068853_100000275 Ga0068853_10000027519 550
139 3300005548 Ga0070665_100002005 Ga0070665_10000200517 550
140 3300005563 Ga0068855_100065084 Ga0068855_1000650843 550
141 3300005577 Ga0068857_100161322 Ga0068857_1001613221 550
142 3300005614 Ga0068856_100052005 Ga0068856_1000520054 550
143 3300005617 Ga0068859_100003006 Ga0068859_1000030063 550
144 3300005617 Ga0068859_100083572 Ga0068859_1000835723 550
145 3300005618 Ga0068864_100000692 Ga0068864_1000006929 550
146 3300005618 Ga0068864_100000765 Ga0068864_10000076535 550
147 3300005719 Ga0068861_100000481 Ga0068861_1000004812 550
148 3300005841 Ga0068863_100000135 Ga0068863_10000013516 550
149 3300005842 Ga0068858_100001172 Ga0068858_10000117230 550
150 3300005843 Ga0068860_100000526 Ga0068860_10000052630 550
151 3300005843 Ga0068860_100002967 Ga0068860_10000296718 550
152 3300005844 Ga0068862_100000459 Ga0068862_10000045938 550
153 3300005844 Ga0068862_100000826 Ga0068862_10000082618 550
154 3300005844 Ga0068862_100024642 Ga0068862_1000246423 550
155 3300006846 Ga0075430_100045244 Ga0075430_1000452442 550
156 3300006931 Ga0097620_100003006 Ga0097620_10000300613 550
157 3300006931 Ga0097620_100083572 Ga0097620_1000835723 550
158 3300009101 Ga0105247_10002240 Ga0105247_100022407 550
159 3300009177 Ga0105248_10077127 Ga0105248_100771273 550
160 3300009177 Ga0105248_10128956 Ga0105248_101289562 550
161 3300009545 Ga0105237_10006512 Ga0105237_100065129 550
162 3300009553 Ga0105249_10001217 Ga0105249_100012173 550
163 3300009553 Ga0105249_10001251 Ga0105249_100012518 550
164 3300013306 Ga0163162_10001423 Ga0163162_1000142321 550
165 3300014326 Ga0157380_10088044 Ga0157380_100880442 550
166 3300014968 Ga0157379_10020954 Ga0157379_100209543 550
167 3300014968 Ga0157379_10041647 Ga0157379_100416474 550
168 3300025261 Ga0209233_1000213 Ga0209233_100021394 550
169 3300025900 Ga0207710_10001189 Ga0207710_1000118911 550
170 3300025903 Ga0207680_10000188 Ga0207680_100001887 550
171 3300025903 Ga0207680_10041782 Ga0207680_100417823 550
172 3300025914 Ga0207671_10009355 Ga0207671_100093553 550
173 3300025923 Ga0207681_10000114 Ga0207681_1000011450 550
174 3300025925 Ga0207650_10000136 Ga0207650_1000013653 550
175 3300025925 Ga0207650_10009577 Ga0207650_100095776 550
176 3300025931 Ga0207644_10000034 Ga0207644_10000034110 550
177 3300025941 Ga0207711_10003426 Ga0207711_1000342610 550
178 3300025941 Ga0207711_10062850 Ga0207711_100628503 550
179 3300025941 Ga0207711_10128954 Ga0207711_101289543 550
180 3300025961 Ga0207712_10000900 Ga0207712_100009003 550
181 3300025961 Ga0207712_10029214 Ga0207712_100292145 550
182 3300025972 Ga0207668_10000067 Ga0207668_1000006750 550
183 3300025972 Ga0207668_10000280 Ga0207668_1000028034 550
184 3300025972 Ga0207668_10000360 Ga0207668_1000036032 550
185 3300025986 Ga0207658_10000379 Ga0207658_1000037921 550
186 3300025986 Ga0207658_10002941 Ga0207658_100029419 550
187 3300025986 Ga0207658_10019105 Ga0207658_100191053 550
188 3300026035 Ga0207703_10000584 Ga0207703_1000058434 550
189 3300026041 Ga0207639_10003236 Ga0207639_100032369 550
190 3300026088 Ga0207641_10000770 Ga0207641_100007706 550
191 3300026088 Ga0207641_10049212 Ga0207641_100492122 550
192 3300026095 Ga0207676_10000499 Ga0207676_100004999 550
193 3300026095 Ga0207676_10001576 Ga0207676_1000157611 550
194 3300026116 Ga0207674_10002207 Ga0207674_1000220716 550
195 3300026118 Ga0207675_100000087 Ga0207675_10000008753 550
196 3300028379 Ga0268266_10000221 Ga0268266_10000221101 550
197 3300028379 Ga0268266_10003019 Ga0268266_1000301919 550
198 3300028380 Ga0268265_10000043 Ga0268265_100000438 550
199 3300028380 Ga0268265_10015713 Ga0268265_100157133 550
200 3300028381 Ga0268264_10000192 Ga0268264_10000192111 550
201 3300028381 Ga0268264_10000297 Ga0268264_1000029763 550
202 3300028573 Ga0265334_10000087 Ga0265334_1000008719 550
203 3300028794 Ga0307515_10013676 Ga0307515_100136763 550
204 3300031456 Ga0307513_10015117 Ga0307513_100151173 550
205 3300031616 Ga0307508_10000103 Ga0307508_1000010359 550
206 3300031616 Ga0307508_10022202 Ga0307508_100222023 550
207 3300031730 Ga0307516_10000023 Ga0307516_1000002320 550
208 3300033180 Ga0307510_10000001 Ga0307510_1000000139 550
209 3300033180 Ga0307510_10001251 Ga0307510_100012513 550
210 3300046460 Ga0495638_0000079 Ga0495638_0000079_52107_53777 550
211 3300046460 Ga0495638_0006821 Ga0495638_0006821_5798_7468 550
212 3300046471 Ga0495650_0000163 Ga0495650_0000163_57393_59063 550
213 3300046506 Ga0495583_0000333 Ga0495583_0000333_14750_16420 550
214 3300046506 Ga0495583_0001178 Ga0495583_0001178_19099_20931 550
215 3300046536 Ga0495587_0024557 Ga0495587_0024557_1297_2967 550
216 3300046557 Ga0495622_0026952 Ga0495622_0026952_969_2639 550
217 3300046558 Ga0495633_0055340 Ga0495633_0055340_152_1822 550
218 3300046660 Ga0495625_0001900 Ga0495625_0001900_12340_14172 550
219 3300046692 Ga0495671_0014596 Ga0495671_0014596_209_1879 550
220 3300046809 Ga0495600_0000175 Ga0495600_0000175_30054_31724 550
221 3300047445 Ga0495677_0018997 Ga0495677_0018997_312_2144 550
222 3300047472 Ga0495686_0016552 Ga0495686_0016552_2707_4380 550
223 3300048920 Ga0496117_0044352 Ga0496117_0044352_412_2085 550
224 3300048922 Ga0496119_0028252 Ga0496119_0028252_2131_3804 550
225 3300048924 Ga0496121_0000152 Ga0496121_0000152_135690_137363 550
226 3300049663 Ga0501223_000081 Ga0501223_000081_25087_26760 550
227 3300049664 Ga0501224_000015 Ga0501224_000015_50131_51804 550
228 3300049668 Ga0501233_000032 Ga0501233_000032_1502_3175 550
229 3300049669 Ga0501235_001562 Ga0501235_001562_3207_4880 550
230 3300049705 Ga0501225_0000038 Ga0501225_0000038_1034_2707 550
231 3300049853 Ga0501226_000027 Ga0501226_000027_39181_40854 550
232 3300053080 Ga0500635_0000223 Ga0500635_0000223_8876_10549 550
233 3300053087 Ga0500643_000691 Ga0500643_000691_4700_6532 550
234 3300053094 Ga0500566_0008225 Ga0500566_0008225_846_2519 550
235 3300053109 Ga0500569_010183 Ga0500569_010183_347_2020 550
236 3300053119 Ga0500595_000546 Ga0500595_000546_20792_22462 550
237 3300053119 Ga0500595_002070 Ga0500595_002070_703_2376 550
238 3300053120 Ga0500597_001690 Ga0500597_001690_3381_5063 550
239 3300053121 Ga0500607_001146 Ga0500607_001146_12248_13918 550
240 3300053122 Ga0500608_000862 Ga0500608_000862_6875_8548 550
241 3300053123 Ga0500614_001143 Ga0500614_001143_3203_4876 550
242 3300053131 Ga0500652_018513 Ga0500652_018513_358_2133 550
243 3300053136 Ga0500559_0017908 Ga0500559_0017908_1254_2927 550
244 3300053146 Ga0500588_0000679 Ga0500588_0000679_1007_2677 550
245 3300053156 Ga0500622_0002944 Ga0500622_0002944_4340_6013 550
246 3300053157 Ga0500624_000003 Ga0500624_000003_211493_213175 550
247 3300053157 Ga0500624_000105 Ga0500624_000105_7498_9285 550
248 3300053157 Ga0500624_000127 Ga0500624_000127_14001_15671 550
249 3300053157 Ga0500624_001775 Ga0500624_001775_176_1849 550
250 3300053177 Ga0500636_0000529 Ga0500636_0000529_16189_17976 550
251 3300053177 Ga0500636_0000952 Ga0500636_0000952_10676_12346 550
252 3300053178 Ga0500637_0000045 Ga0500637_0000045_22142_23824 550
253 3300053725 Ga0500576_022150 Ga0500576_022150_1172_2845 550
254 3300053735 Ga0500596_000092 Ga0500596_000092_2992_4665 550
255 iso_pu_bacteria 2643221541 2643730235 550
256 iso_pu_bacteria 2643221605 2644037355 550
257 iso_pu_bacteria 2643221606 2644043404 550
258 iso_pu_bacteria 2643221671 2644393564 550
259 3300005577 Ga0068857_100043882 Ga0068857_1000438822 553
260 3300005577 Ga0068857_100125574 Ga0068857_1001255742 553
261 3300026116 Ga0207674_10067852 Ga0207674_100678522 553
262 3300031911 Ga0307412_10011481 Ga0307412_100114812 553
263 3300002076 JGI24749J21850_1000155 JGI24749J21850_100015511 554
264 3300002459 JGI24751J29686_10000110 JGI24751J29686_100001109 554
265 3300005295 Ga0065707_10086312 Ga0065707_100863124 554
266 3300005331 Ga0070670_100000031 Ga0070670_10000003187 554
267 3300005353 Ga0070669_100000026 Ga0070669_10000002630 554
268 3300005367 Ga0070667_100019478 Ga0070667_1000194783 554
269 3300005617 Ga0068859_100004204 Ga0068859_10000420414 554
270 3300005618 Ga0068864_100000075 Ga0068864_10000007530 554
271 3300005719 Ga0068861_100015816 Ga0068861_1000158163 554
272 3300005844 Ga0068862_100000006 Ga0068862_100000006275 554
273 3300006195 Ga0075366_10049780 Ga0075366_100497802 554
274 3300006931 Ga0097620_100004204 Ga0097620_1000042042 554
275 3300009177 Ga0105248_10001039 Ga0105248_1000103911 554
276 3300025923 Ga0207681_10000001 Ga0207681_10000001949 554
277 3300025925 Ga0207650_10000055 Ga0207650_1000005587 554
278 3300025941 Ga0207711_10041211 Ga0207711_100412112 554
279 3300025986 Ga0207658_10004533 Ga0207658_100045333 554
280 3300026095 Ga0207676_10000004 Ga0207676_1000000480 554
281 3300026118 Ga0207675_100000953 Ga0207675_10000095326 554
282 3300028380 Ga0268265_10000002 Ga0268265_100000021000 554
283 3300046542 Ga0495597_0019234 Ga0495597_0019234_610_2337 554
284 3300046660 Ga0495625_0053793 Ga0495625_0053793_548_2275 554
285 3300053091 Ga0500647_0028551 Ga0500647_0028551_301_2028 554
286 3300053093 Ga0500651_0021623 Ga0500651_0021623_378_2105 554
287 3300053133 Ga0500655_000419 Ga0500655_000419_5374_7101 554
288 3300053156 Ga0500622_0028850 Ga0500622_0028850_87_1814 554
289 3300053724 Ga0500570_000688 Ga0500570_000688_12082_13809 554
290 iso_pu_bacteria 2582581305 2585260629 554

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05977

MFS_3

Transmembrane secretion effector

67

588

0.99

PF07690

MFS_1

Major Facilitator Superfamily

81

404

0.9

PF07690

MFS_1

Major Facilitator Superfamily

292

501

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
6kkl-assembly1.cif.gz_A crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward conformation (h115n mutant) 0.8754 22 404
5uq4-assembly1.cif.gz_A crystal structure of heme-degrading protein rv3592 from mycobacterium tuberculosis - heme free with cleaved protein 0.8685 433 504
3kg1-assembly3.cif.gz_A-2 crystal structure of snoab, a cofactor-independent oxygenase from streptomyces nogalater, mutant n63a 0.8658 434 529
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.8523 23 404
6kkl-assembly1.cif.gz_A crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward conformation (h115n mutant) 0.8447 22 404
ID Description Score Start End Superfamily
af_Q2G1R0_3_202_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9232 17 210 1.20.1250.20
af_P24077_14_401_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9163 20 403 1.20.1250.20
af_Q9VQ52_522_713_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9071 228 403 1.20.1250.20
af_A4I8Z5_294_489_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9031 218 403 1.20.1250.20
af_P24077_14_401_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8984 20 403 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A3C2DHX3-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9227 20 373 GO:0005886
AF-A0A3B9I195-F1-model_v4 Macrolide efflux MFS transporter Mef(B) 0.9205 14 222 GO:0005886
GO:0022857
AF-A0A350T4D9-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9203 230 405 GO:0005886
GO:0022857
AF-A0A6I3BS21-F1-model_v4 MFS transporter 0.9175 12 228 GO:0005886
GO:0022857
AF-A0A7X4BYP6-F1-model_v4 MFS transporter 0.9173 12 403 GO:0005886
GO:0022857

Feature Viewer

pLDDT pTM Quality
81.98 0.76 High
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Predicted Structure (AlphaFold2)

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