F389953

General Info

Members Datasets Scaffolds Average Seq Length
290 167 281 243

Family's Representative Sequence

Representative Sequence 3300046507|Ga0495606_0018097|Ga0495606_0018097_1141_1938
Length 265
Sequence MDTITNNQEDNQKSSPLGRVGRGEILGIIPARFASTRFPGKPLVDIGGKSMIQRVYEQSKKCTSISEVIVATDDDRIFEHVHAFGGKAVMTSSEHQSGTDRCAEVALLHPEYDVIINIQGDEPYIDPEQLTKVAACFTDPETQLATLIKKILTEEELHNVNSPKVIINRFAEAIYFSRSPLPHIRGQQAADWLQHFTYFKHIGVYGYRADILQQITKLPVSALEKAESLEQLRWIENGYRIKVAETELETYAIDTPEDLLKLKSQ

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2738543023 Pedobacter sp. OK628 Isolate Unclassified
3 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
4 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
5 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
6 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
7 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
8 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
9 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
10 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
11 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
12 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
13 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
14 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
15 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
16 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
17 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
18 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
19 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
20 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
21 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
22 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
23 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
24 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
25 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
26 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
27 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
28 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
29 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
30 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
41 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
66 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
68 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
69 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
70 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
106 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
107 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
108 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
109 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
110 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
111 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
112 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
113 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
114 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
115 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
120 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
121 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
122 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
123 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
124 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
125 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
126 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
127 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
128 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
129 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
130 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
131 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
132 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
133 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
134 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
135 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
136 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
137 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
138 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
139 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
140 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
141 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
142 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
143 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
144 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
145 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
146 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
147 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
148 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
149 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
150 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
151 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
152 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
153 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
154 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
155 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
156 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
157 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
158 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
160 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
161 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
162 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
163 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
164 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
165 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
166 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
167 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.55
Metatranscriptomes 0
Isolates 3.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.59
Nodule 0
Rhizoplane 0.34
Rhizosphere 83.79
Stem 0
Stem Tuber 0
Unclassified 8.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1015193 3300001915 Bacteria 1274
2 JGI24737J22298_10008872 3300001990 Bacteria 3357
3 JGI24735J21928_10000006 3300002067 Bacteria 339303
4 JGI25162J39368_1000089 3300002737 Bacteria 104054
5 JGI25162J39368_1000498 3300002737 Bacteria 29793
6 JGI25157J39369_1002859 3300002741 Bacteria 3884
7 JGI25165J46597_1000618 3300003214 Bacteria 30063
8 rootH1_10029777 3300003316 Bacteria 8945
9 rootH1_10097430 3300003316 Bacteria 3336
10 rootH2_10018591 3300003320 Bacteria 30571
11 rootH2_10048928 3300003320 Bacteria 10311
12 rootL2_10340508 3300003322 Bacteria 2991
13 rootH1_10017303 3300003316 Bacteria 2498
14 rootH1_10017303 3300003323 Bacteria 3248
15 rootH1_10092741 3300003323 Bacteria 1475
16 rootH1_10262527 3300003323 Bacteria 1513
17 rootH1_10283879 3300003323 Unclassified 2392
18 rootH1_10316144 3300003323 Bacteria 1507
19 Ga0065714_10002309 3300005288 Bacteria 43077
20 Ga0065714_10098385 3300005288 Bacteria 1670
21 Ga0065714_10105672 3300005288 Bacteria 1562
22 Ga0065714_10112793 3300005288 Bacteria 1450
23 Ga0070658_10000018 3300005327 Bacteria 200558
24 Ga0070658_10039773 3300005327 Bacteria 3794
25 Ga0070676_10004488 3300005328 Bacteria 7345
26 Ga0070676_10491306 3300005328 Bacteria 870
27 Ga0070677_10260240 3300005333 Unclassified 865
28 Ga0070680_100155975 3300005336 Bacteria 1918
29 Ga0070680_100491696 3300005336 Bacteria 1049
30 Ga0068868_100118517 3300005338 Bacteria 2158
31 Ga0070661_100467609 3300005344 Bacteria 1005
32 Ga0070671_100032168 3300005355 Bacteria 4338
33 Ga0070673_100008881 3300005364 Bacteria 6715
34 Ga0070659_100011927 3300005366 Bacteria 6434
35 Ga0070659_100012314 3300005366 Bacteria 6339
36 Ga0070662_100000626 3300005457 Bacteria 21383
37 Ga0070679_100008363 3300005530 Bacteria 9736
38 Ga0070679_100574225 3300005530 Bacteria 1071
39 Ga0068853_100014612 3300005539 Bacteria 6438
40 Ga0070665_100000072 3300005548 Bacteria 198575
41 Ga0068855_100000268 3300005563 Bacteria 64693
42 Ga0068855_100040784 3300005563 Bacteria 5507
43 Ga0068855_100319919 3300005563 Bacteria 1715
44 Ga0068855_100890698 3300005563 Bacteria 941
45 Ga0068857_100105421 3300005577 Bacteria 2531
46 Ga0068857_100357997 3300005577 Bacteria 1352
47 Ga0068854_100106940 3300005578 Bacteria 2105
48 Ga0068856_100000897 3300005614 Bacteria 31872
49 Ga0068856_100003887 3300005614 Bacteria 14987
50 Ga0068856_100006249 3300005614 Bacteria 11693
51 Ga0068852_100167918 3300005616 Bacteria 2054
52 Ga0068866_10089200 3300005718 Bacteria 1675
53 Ga0068851_10092694 3300005834 Bacteria 1592
54 Ga0068858_100308255 3300005842 Unclassified 1511
55 Ga0068860_100030011 3300005843 Bacteria 5229
56 Ga0075366_10001711 3300006195 Bacteria 11028
57 Ga0075366_10007841 3300006195 Bacteria 5907
58 Ga0075366_10011696 3300006195 Bacteria 4959
59 Ga0075366_10137089 3300006195 Bacteria 1478
60 Ga0097621_100000028 3300006237 Bacteria 71678
61 Ga0068871_100000066 3300006358 Bacteria 57980
62 Ga0068865_100000127 3300006881 Bacteria 39327
63 Ga0105240_10000237 3300009093 Bacteria 109895
64 Ga0105240_10012165 3300009093 Bacteria 11914
65 Ga0105240_10014965 3300009093 Bacteria 10571
66 Ga0105240_10055422 3300009093 Bacteria 4963
67 Ga0105240_10087251 3300009093 Bacteria 3821
68 Ga0105240_10137757 3300009093 Bacteria 2921
69 Ga0105240_10212288 3300009093 Bacteria 2261
70 Ga0105240_10301087 3300009093 Bacteria 1834
71 Ga0105240_10672725 3300009093 Unclassified 1132
72 Ga0105240_10956818 3300009093 Bacteria 918
73 Ga0105240_10994647 3300009093 Unclassified 897
74 Ga0105245_10160888 3300009098 Unclassified 2130
75 Ga0105243_10000007 3300009148 Bacteria 445042
76 Ga0105241_10017595 3300009174 Bacteria 5256
77 Ga0105241_10086712 3300009174 Bacteria 2462
78 Ga0105241_10087107 3300009174 Bacteria 2457
79 Ga0105241_10647451 3300009174 Bacteria 959
80 Ga0105242_10041309 3300009176 Unclassified 3720
81 Ga0105237_10000485 3300009545 Bacteria 56664
82 Ga0105237_10001308 3300009545 Bacteria 33108
83 Ga0105237_10020420 3300009545 Bacteria 6828
84 Ga0105237_10091764 3300009545 Bacteria 3027
85 Ga0105237_10098481 3300009545 Bacteria 2915
86 Ga0105237_10226913 3300009545 Bacteria 1868
87 Ga0105237_10267461 3300009545 Bacteria 1713
88 Ga0105237_10276502 3300009545 Bacteria 1682
89 Ga0105238_10295454 3300009551 Bacteria 1603
90 Ga0105239_10000039 3300010375 Bacteria 203537
91 Ga0105239_10000120 3300010375 Bacteria 110003
92 Ga0105239_10000999 3300010375 Bacteria 39639
93 Ga0105239_10004436 3300010375 Bacteria 16776
94 Ga0105239_10008354 3300010375 Bacteria 11794
95 Ga0105239_10129491 3300010375 Bacteria 2806
96 Ga0105239_10677452 3300010375 Bacteria 1178
97 Ga0157373_10000208 3300013100 Bacteria 48082
98 Ga0157373_10002214 3300013100 Bacteria 14711
99 Ga0157371_10000263 3300013102 Bacteria 71557
100 Ga0157371_10015157 3300013102 Bacteria 5790
101 Ga0157369_10001443 3300013105 Bacteria 29190
102 Ga0157369_10128667 3300013105 Bacteria 2684
103 Ga0157369_10464769 3300013105 Bacteria 1310
104 Ga0157374_10001845 3300013296 Bacteria 17834
105 Ga0157374_10068860 3300013296 Bacteria 3331
106 Ga0157374_10205410 3300013296 Bacteria 1930
107 Ga0157374_10500573 3300013296 Bacteria 1219
108 Ga0157374_10562536 3300013296 Bacteria 1148
109 Ga0157378_10009103 3300013297 Bacteria 8645
110 Ga0157378_10355582 3300013297 Bacteria 1432
111 Ga0163162_10000010 3300013306 Bacteria 302032
112 Ga0163162_10013931 3300013306 Bacteria 7855
113 Ga0163162_10044397 3300013306 Bacteria 4451
114 Ga0163162_10148064 3300013306 Bacteria 2465
115 Ga0157372_10000050 3300013307 Bacteria 140381
116 Ga0157372_10000266 3300013307 Bacteria 57783
117 Ga0157372_10001419 3300013307 Bacteria 25842
118 Ga0157372_10002231 3300013307 Bacteria 21022
119 Ga0157372_10169067 3300013307 Bacteria 2529
120 Ga0157375_10021612 3300013308 Bacteria 5905
121 Ga0157375_10052779 3300013308 Bacteria 3998
122 Ga0157375_10438477 3300013308 Unclassified 1472
123 Ga0157377_10003083 3300014745 Bacteria 7483
124 Ga0213872_10008831 3300021361 Bacteria 4861
125 Ga0207427_100172 3300025231 Bacteria 71550
126 Ga0209437_100034 3300025233 Bacteria 494007
127 Ga0209437_100221 3300025233 Bacteria 104135
128 Ga0209026_1001390 3300025250 Bacteria 10786
129 Ga0209026_1003604 3300025250 Bacteria 4984
130 Ga0209026_1012155 3300025250 Bacteria 1512
131 Ga0209233_1000038 3300025261 Bacteria 548972
132 Ga0209233_1001428 3300025261 Bacteria 9422
133 Ga0209455_1002780 3300025272 Bacteria 6536
134 Ga0207682_10073229 3300025893 Bacteria 1455
135 Ga0207642_10091127 3300025899 Bacteria 1506
136 Ga0207647_10000076 3300025904 Bacteria 75824
137 Ga0207647_10041142 3300025904 Bacteria 2908
138 Ga0207645_10009597 3300025907 Bacteria 6687
139 Ga0207705_10000036 3300025909 Bacteria 200787
140 Ga0207654_10010617 3300025911 Bacteria 4690
141 Ga0207654_10092752 3300025911 Bacteria 1845
142 Ga0207654_10230648 3300025911 Bacteria 1233
143 Ga0207654_10271032 3300025911 Bacteria 1145
144 Ga0207695_10000013 3300025913 Bacteria 821265
145 Ga0207695_10004656 3300025913 Bacteria 18589
146 Ga0207695_10012457 3300025913 Bacteria 10211
147 Ga0207695_10185629 3300025913 Bacteria 1998
148 Ga0207695_10217335 3300025913 Bacteria 1820
149 Ga0207695_10287304 3300025913 Bacteria 1537
150 Ga0207695_10662795 3300025913 Unclassified 924
151 Ga0207671_10007184 3300025914 Bacteria 9706
152 Ga0207671_10011004 3300025914 Bacteria 7407
153 Ga0207671_10011316 3300025914 Bacteria 7272
154 Ga0207671_10013604 3300025914 Bacteria 6475
155 Ga0207671_10042583 3300025914 Bacteria 3361
156 Ga0207660_10056567 3300025917 Bacteria 2807
157 Ga0207660_10567127 3300025917 Bacteria 924
158 Ga0207657_10051991 3300025919 Bacteria 3559
159 Ga0207652_10252644 3300025921 Bacteria 1590
160 Ga0207652_10523377 3300025921 Bacteria 1067
161 Ga0207652_10528633 3300025921 Bacteria 1061
162 Ga0207694_10098123 3300025924 Bacteria 2319
163 Ga0207687_10120188 3300025927 Unclassified 1963
164 Ga0207644_10012499 3300025931 Bacteria 5642
165 Ga0207690_10007483 3300025932 Bacteria 6482
166 Ga0207706_10006487 3300025933 Bacteria 10861
167 Ga0207686_10253649 3300025934 Bacteria 1286
168 Ga0207709_10000033 3300025935 Bacteria 320483
169 Ga0207704_10000044 3300025938 Bacteria 86753
170 Ga0207689_10283293 3300025942 Bacteria 1372
171 Ga0207661_10011177 3300025944 Bacteria 6494
172 Ga0207667_10000971 3300025949 Bacteria 36600
173 Ga0207667_10014743 3300025949 Bacteria 8895
174 Ga0207667_10113776 3300025949 Bacteria 2790
175 Ga0207651_10402702 3300025960 Bacteria 1164
176 Ga0207640_10224174 3300025981 Bacteria 1441
177 Ga0207658_10032169 3300025986 Bacteria 3731
178 Ga0207677_10383494 3300026023 Bacteria 1187
179 Ga0207639_10157328 3300026041 Bacteria 1911
180 Ga0207678_10132902 3300026067 Bacteria 2123
181 Ga0207702_10000507 3300026078 Bacteria 43964
182 Ga0207702_10002698 3300026078 Bacteria 16666
183 Ga0207702_10005892 3300026078 Bacteria 10658
184 Ga0207648_10000529 3300026089 Bacteria 42805
185 Ga0207674_10104871 3300026116 Bacteria 2805
186 Ga0207683_10102337 3300026121 Bacteria 2558
187 Ga0268266_10000089 3300028379 Bacteria 198566
188 Ga0268264_10192965 3300028381 Unclassified 1858
189 Ga0307517_10028099 3300028786 Bacteria 6724
190 Ga0307515_10001481 3300028794 Bacteria 52778
191 Ga0265324_10035987 3300029957 Unclassified 1722
192 Ga0265327_10000286 3300031251 Bacteria 99387
193 Ga0307509_10192023 3300031507 Bacteria 1891
194 Ga0307412_10165505 3300031911 Bacteria 1648
195 Ga0307414_10000683 3300032004 Bacteria 17364
196 Ga0307414_10021028 3300032004 Bacteria 4082
197 Ga0307411_10120491 3300032005 Bacteria 1897
198 Ga0307510_10006636 3300033180 Bacteria 13804
199 Ga0395899_0000659 3300037312 Bacteria 35170
200 Ga0395899_0001109 3300037312 Bacteria 24123
201 Ga0395900_0000277 3300037418 Bacteria 77256
202 Ga0395900_0001234 3300037418 Bacteria 31453
203 Ga0395900_0006864 3300037418 Bacteria 11808
204 Ga0395898_0001918 3300037466 Bacteria 26473
205 Ga0395898_0261750 3300037466 Unclassified 1650
206 Ga0395905_0000001 3300037471 Bacteria 2037079
207 Ga0395905_0000068 3300037471 Bacteria 177163
208 Ga0395905_0003090 3300037471 Bacteria 17997
209 Ga0395905_0100157 3300037471 Bacteria 2721
210 Ga0395901_0000199 3300038443 Bacteria 76415
211 Ga0395901_0005268 3300038443 Bacteria 13060
212 Ga0436361_0021069 3300039447 Bacteria 6990
213 Ga0451835_1013501 3300041492 Bacteria 855
214 Ga0439448_0004048 3300042005 Bacteria 4119
215 Ga0451577_0172984 3300042876 Bacteria 1946
216 Ga0466966_0016086 3300044684 Bacteria 4946
217 Ga0466961_0009707 3300044693 Bacteria 6126
218 Ga0453684_0000256 3300044712 Bacteria 228862
219 Ga0453684_0222744 3300044712 Bacteria 2184
220 Ga0453684_0418929 3300044712 Unclassified 1496
221 Ga0466970_0065381 3300044765 Bacteria 1951
222 Ga0466959_0242931 3300045049 Bacteria 1243
223 Ga0451576_0005677 3300045051 Bacteria 15572
224 Ga0451576_0008985 3300045051 Bacteria 11642
225 Ga0495592_0009100 3300046454 Bacteria 7471
226 Ga0495629_0118124 3300046459 Bacteria 1848
227 Ga0495650_0000014 3300046471 Bacteria 581606
228 Ga0495585_0003658 3300046492 Bacteria 10277
229 Ga0495596_0008567 3300046500 Bacteria 4544
230 Ga0495583_0029592 3300046506 Bacteria 2678
231 Ga0495606_0000528 3300046507 Bacteria 61795
232 Ga0495606_0018097 3300046507 Bacteria 5298
233 Ga0495610_0007323 3300046512 Bacteria 7378
234 Ga0495610_0123091 3300046512 Bacteria 1134
235 Ga0495616_0002812 3300046513 Bacteria 11360
236 Ga0495616_0005759 3300046513 Bacteria 7578
237 Ga0495628_0146798 3300046516 Bacteria 1798
238 Ga0495631_0064266 3300046518 Unclassified 1589
239 Ga0495644_0024915 3300046523 Bacteria 2274
240 Ga0495648_0011532 3300046524 Bacteria 6648
241 Ga0495648_0024481 3300046524 Bacteria 4110
242 Ga0495648_0025358 3300046524 Bacteria 4015
243 Ga0495652_0083935 3300046529 Bacteria 2621
244 Ga0495652_0177690 3300046529 Bacteria 1637
245 Ga0495609_0005281 3300046538 Bacteria 6852
246 Ga0495633_0000035 3300046558 Bacteria 185403
247 Ga0495633_0013635 3300046558 Bacteria 4276
248 Ga0495625_0000009 3300046660 Bacteria 404954
249 Ga0495625_0001432 3300046660 Bacteria 29071
250 Ga0495625_0003222 3300046660 Bacteria 16524
251 Ga0495625_0014899 3300046660 Bacteria 6182
252 Ga0495625_0047262 3300046660 Bacteria 3103
253 Ga0495625_0516479 3300046660 Bacteria 728
254 Ga0495661_0030416 3300046665 Bacteria 3439
255 Ga0495669_0068743 3300046684 Bacteria 1612
256 Ga0495649_0000002 3300046694 Bacteria 1093458
257 Ga0495600_0207076 3300046809 Bacteria 1258
258 Ga0495660_0153824 3300046810 Bacteria 1133
259 Ga0495683_0155808 3300047323 Bacteria 1059
260 Ga0495687_001120 3300047443 Bacteria 26041
261 Ga0495687_006439 3300047443 Bacteria 7196
262 Ga0495679_070471 3300047446 Bacteria 1008
263 Ga0495686_0001209 3300047472 Bacteria 29698
264 Ga0495686_0001825 3300047472 Bacteria 21435
265 Ga0495686_0166344 3300047472 Bacteria 1285
266 Ga0496125_0211756 3300048928 Bacteria 1258
267 Ga0495678_004035 3300049459 Bacteria 8737
268 Ga0495682_0044746 3300049460 Bacteria 1619
269 Ga0501033_0408254 3300049570 Unclassified 947
270 Ga0501223_007920 3300049663 Bacteria 2167
271 Ga0501257_028516 3300049686 Bacteria 1339
272 Ga0501241_013932 3300049758 Bacteria 1460
273 nmdc:mga0k408_260_c1 3300050493 Bacteria 28863
274 nmdc:mga0k408_5126_c1 3300050493 Bacteria 6939
275 nmdc:mga0k408_859_c1 3300050493 Bacteria 12690
276 Ga0500635_0012138 3300053080 Bacteria 2465
277 Ga0500608_000203 3300053122 Bacteria 23751
278 Ga0500618_000037 3300053125 Bacteria 117320
279 Ga0500618_011873 3300053125 Bacteria 2299
280 Ga0500616_0119645 3300053153 Bacteria 1260
281 Ga0500624_001049 3300053157 Bacteria 5417

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037466 Ga0395898_0261750 Ga0395898_0261750_11_655 214
2 3300049570 Ga0501033_0408254 Ga0501033_0408254_96_758 214
3 3300041492 Ga0451835_1013501 Ga0451835_1013501_91_765 222
4 3300046660 Ga0495625_0516479 Ga0495625_0516479_46_717 222
5 3300009093 Ga0105240_10137757 Ga0105240_101377571 223
6 3300025893 Ga0207682_10073229 Ga0207682_100732292 225
7 3300003320 rootH2_10048928 rootH2_1004892810 226
8 3300003322 rootL2_10340508 rootL2_103405083 237
9 3300049460 Ga0495682_0044746 Ga0495682_0044746_816_1529 237
10 iso_pu_bacteria 2599185184 2599477062 238
11 iso_pu_bacteria 2738543023 2739301320 238
12 iso_pu_bacteria 2896317667 2896318352 238
13 iso_pu_bacteria 2919186247 2919186471 238
14 iso_pu_bacteria 2919437846 2919442237 238
15 iso_pu_bacteria 2928078545 2928078975 238
16 iso_pu_bacteria 2928147474 2928148657 238
17 iso_pu_bacteria 2939664404 2939666258 238
18 iso_pu_bacteria 2977232053 2977232830 238
19 3300044712 Ga0453684_0222744 Ga0453684_0222744_691_1422 239
20 3300047472 Ga0495686_0166344 Ga0495686_0166344_20_739 239
21 3300005288 Ga0065714_10002309 Ga0065714_1000230932 240
22 3300005530 Ga0070679_100574225 Ga0070679_1005742251 240
23 3300025921 Ga0207652_10528633 Ga0207652_105286331 240
24 3300042876 Ga0451577_0172984 Ga0451577_0172984_993_1757 240
25 3300044712 Ga0453684_0000256 Ga0453684_0000256_38325_39074 240
26 3300044712 Ga0453684_0418929 Ga0453684_0418929_187_969 240
27 3300045051 Ga0451576_0005677 Ga0451576_0005677_5961_6725 240
28 3300003323 rootH1_10283879 rootH1_102838793 241
29 3300005328 Ga0070676_10004488 Ga0070676_100044889 241
30 3300005328 Ga0070676_10491306 Ga0070676_104913061 241
31 3300005364 Ga0070673_100008881 Ga0070673_10000888111 241
32 3300005563 Ga0068855_100890698 Ga0068855_1008906981 241
33 3300005718 Ga0068866_10089200 Ga0068866_100892002 241
34 3300005842 Ga0068858_100308255 Ga0068858_1003082552 241
35 3300006881 Ga0068865_100000127 Ga0068865_10000012727 241
36 3300009093 Ga0105240_10014965 Ga0105240_100149658 241
37 3300009093 Ga0105240_10956818 Ga0105240_109568181 241
38 3300009174 Ga0105241_10086712 Ga0105241_100867122 241
39 3300010375 Ga0105239_10677452 Ga0105239_106774521 241
40 3300013296 Ga0157374_10562536 Ga0157374_105625361 241
41 3300013297 Ga0157378_10009103 Ga0157378_100091036 241
42 3300013297 Ga0157378_10355582 Ga0157378_103555821 241
43 3300013306 Ga0163162_10148064 Ga0163162_101480642 241
44 3300014745 Ga0157377_10003083 Ga0157377_100030836 241
45 3300021361 Ga0213872_10008831 Ga0213872_100088315 241
46 3300025899 Ga0207642_10091127 Ga0207642_100911271 241
47 3300025907 Ga0207645_10009597 Ga0207645_100095972 241
48 3300025911 Ga0207654_10092752 Ga0207654_100927522 241
49 3300025911 Ga0207654_10230648 Ga0207654_102306481 241
50 3300025913 Ga0207695_10004656 Ga0207695_100046569 241
51 3300025938 Ga0207704_10000044 Ga0207704_1000004443 241
52 3300025942 Ga0207689_10283293 Ga0207689_102832932 241
53 3300025960 Ga0207651_10402702 Ga0207651_104027021 241
54 3300026089 Ga0207648_10000529 Ga0207648_1000052910 241
55 3300026121 Ga0207683_10102337 Ga0207683_101023372 241
56 3300029957 Ga0265324_10035987 Ga0265324_100359871 241
57 3300031251 Ga0265327_10000286 Ga0265327_100002862 241
58 3300033180 Ga0307510_10006636 Ga0307510_1000663615 241
59 3300037471 Ga0395905_0100157 Ga0395905_0100157_463_1206 241
60 3300039447 Ga0436361_0021069 Ga0436361_0021069_3816_4544 241
61 3300044765 Ga0466970_0065381 Ga0466970_0065381_83_823 241
62 3300046518 Ga0495631_0064266 Ga0495631_0064266_213_938 241
63 3300047323 Ga0495683_0155808 Ga0495683_0155808_88_813 241
64 3300049686 Ga0501257_028516 Ga0501257_028516_149_883 241
65 3300001915 JGI24741J21665_1015193 JGI24741J21665_10151931 242
66 3300001990 JGI24737J22298_10008872 JGI24737J22298_100088722 242
67 3300002067 JGI24735J21928_10000006 JGI24735J21928_10000006254 242
68 3300002737 JGI25162J39368_1000089 JGI25162J39368_100008952 242
69 3300002737 JGI25162J39368_1000498 JGI25162J39368_100049822 242
70 3300002741 JGI25157J39369_1002859 JGI25157J39369_10028592 242
71 3300003214 JGI25165J46597_1000618 JGI25165J46597_10006186 242
72 3300003316 rootH1_10029777 rootH1_100297773 242
73 3300003316 rootH1_10097430 rootH1_100974304 242
74 3300003320 rootH2_10018591 rootH2_100185917 242
75 3300003323 rootH1_10017303 rootH1_100173032 242
76 3300003323 rootH1_10092741 rootH1_100927412 242
77 3300003323 rootH1_10262527 rootH1_102625272 242
78 3300003323 rootH1_10316144 rootH1_103161442 242
79 3300005288 Ga0065714_10098385 Ga0065714_100983851 242
80 3300005288 Ga0065714_10105672 Ga0065714_101056722 242
81 3300005288 Ga0065714_10112793 Ga0065714_101127931 242
82 3300005327 Ga0070658_10000018 Ga0070658_10000018113 242
83 3300005327 Ga0070658_10039773 Ga0070658_100397733 242
84 3300005333 Ga0070677_10260240 Ga0070677_102602401 242
85 3300005336 Ga0070680_100155975 Ga0070680_1001559752 242
86 3300005336 Ga0070680_100491696 Ga0070680_1004916962 242
87 3300005338 Ga0068868_100118517 Ga0068868_1001185172 242
88 3300005344 Ga0070661_100467609 Ga0070661_1004676092 242
89 3300005355 Ga0070671_100032168 Ga0070671_1000321683 242
90 3300005366 Ga0070659_100011927 Ga0070659_1000119273 242
91 3300005366 Ga0070659_100012314 Ga0070659_1000123143 242
92 3300005457 Ga0070662_100000626 Ga0070662_10000062615 242
93 3300005530 Ga0070679_100008363 Ga0070679_10000836310 242
94 3300005539 Ga0068853_100014612 Ga0068853_1000146122 242
95 3300005548 Ga0070665_100000072 Ga0070665_10000007269 242
96 3300005563 Ga0068855_100000268 Ga0068855_10000026814 242
97 3300005563 Ga0068855_100040784 Ga0068855_1000407848 242
98 3300005563 Ga0068855_100319919 Ga0068855_1003199193 242
99 3300005577 Ga0068857_100105421 Ga0068857_1001054212 242
100 3300005577 Ga0068857_100357997 Ga0068857_1003579972 242
101 3300005578 Ga0068854_100106940 Ga0068854_1001069402 242
102 3300005614 Ga0068856_100000897 Ga0068856_10000089726 242
103 3300005614 Ga0068856_100003887 Ga0068856_1000038876 242
104 3300005614 Ga0068856_100006249 Ga0068856_1000062494 242
105 3300005616 Ga0068852_100167918 Ga0068852_1001679183 242
106 3300005834 Ga0068851_10092694 Ga0068851_100926942 242
107 3300005843 Ga0068860_100030011 Ga0068860_1000300115 242
108 3300006195 Ga0075366_10001711 Ga0075366_100017112 242
109 3300006195 Ga0075366_10007841 Ga0075366_100078415 242
110 3300006195 Ga0075366_10011696 Ga0075366_100116964 242
111 3300006195 Ga0075366_10137089 Ga0075366_101370891 242
112 3300006237 Ga0097621_100000028 Ga0097621_10000002811 242
113 3300006358 Ga0068871_100000066 Ga0068871_1000000668 242
114 3300009093 Ga0105240_10000237 Ga0105240_1000023722 242
115 3300009093 Ga0105240_10012165 Ga0105240_100121657 242
116 3300009093 Ga0105240_10055422 Ga0105240_100554223 242
117 3300009093 Ga0105240_10087251 Ga0105240_100872511 242
118 3300009093 Ga0105240_10212288 Ga0105240_102122882 242
119 3300009093 Ga0105240_10301087 Ga0105240_103010872 242
120 3300009093 Ga0105240_10672725 Ga0105240_106727251 242
121 3300009093 Ga0105240_10994647 Ga0105240_109946472 242
122 3300009098 Ga0105245_10160888 Ga0105245_101608882 242
123 3300009148 Ga0105243_10000007 Ga0105243_1000000734 242
124 3300009174 Ga0105241_10017595 Ga0105241_100175952 242
125 3300009174 Ga0105241_10087107 Ga0105241_100871073 242
126 3300009174 Ga0105241_10647451 Ga0105241_106474512 242
127 3300009176 Ga0105242_10041309 Ga0105242_100413092 242
128 3300009545 Ga0105237_10000485 Ga0105237_1000048533 242
129 3300009545 Ga0105237_10001308 Ga0105237_100013082 242
130 3300009545 Ga0105237_10020420 Ga0105237_100204205 242
131 3300009545 Ga0105237_10091764 Ga0105237_100917644 242
132 3300009545 Ga0105237_10098481 Ga0105237_100984813 242
133 3300009545 Ga0105237_10226913 Ga0105237_102269132 242
134 3300009545 Ga0105237_10267461 Ga0105237_102674612 242
135 3300009545 Ga0105237_10276502 Ga0105237_102765021 242
136 3300009551 Ga0105238_10295454 Ga0105238_102954542 242
137 3300010375 Ga0105239_10000039 Ga0105239_10000039147 242
138 3300010375 Ga0105239_10000120 Ga0105239_1000012078 242
139 3300010375 Ga0105239_10000999 Ga0105239_100009993 242
140 3300010375 Ga0105239_10004436 Ga0105239_1000443618 242
141 3300010375 Ga0105239_10008354 Ga0105239_100083543 242
142 3300010375 Ga0105239_10129491 Ga0105239_101294912 242
143 3300013100 Ga0157373_10000208 Ga0157373_1000020818 242
144 3300013100 Ga0157373_10002214 Ga0157373_100022146 242
145 3300013102 Ga0157371_10000263 Ga0157371_1000026317 242
146 3300013102 Ga0157371_10015157 Ga0157371_100151577 242
147 3300013105 Ga0157369_10001443 Ga0157369_100014436 242
148 3300013105 Ga0157369_10128667 Ga0157369_101286672 242
149 3300013105 Ga0157369_10464769 Ga0157369_104647691 242
150 3300013296 Ga0157374_10001845 Ga0157374_1000184511 242
151 3300013296 Ga0157374_10068860 Ga0157374_100688604 242
152 3300013296 Ga0157374_10205410 Ga0157374_102054101 242
153 3300013296 Ga0157374_10500573 Ga0157374_105005731 242
154 3300013306 Ga0163162_10000010 Ga0163162_1000001058 242
155 3300013306 Ga0163162_10013931 Ga0163162_100139317 242
156 3300013306 Ga0163162_10044397 Ga0163162_100443974 242
157 3300013307 Ga0157372_10000050 Ga0157372_10000050109 242
158 3300013307 Ga0157372_10000266 Ga0157372_1000026649 242
159 3300013307 Ga0157372_10001419 Ga0157372_1000141919 242
160 3300013307 Ga0157372_10002231 Ga0157372_1000223110 242
161 3300013307 Ga0157372_10169067 Ga0157372_101690673 242
162 3300013308 Ga0157375_10021612 Ga0157375_100216123 242
163 3300013308 Ga0157375_10052779 Ga0157375_100527792 242
164 3300013308 Ga0157375_10438477 Ga0157375_104384772 242
165 3300025231 Ga0207427_100172 Ga0207427_10017271 242
166 3300025233 Ga0209437_100034 Ga0209437_100034176 242
167 3300025233 Ga0209437_100221 Ga0209437_10022156 242
168 3300025250 Ga0209026_1001390 Ga0209026_10013906 242
169 3300025250 Ga0209026_1003604 Ga0209026_10036045 242
170 3300025250 Ga0209026_1012155 Ga0209026_10121552 242
171 3300025261 Ga0209233_1000038 Ga0209233_1000038176 242
172 3300025261 Ga0209233_1001428 Ga0209233_10014287 242
173 3300025272 Ga0209455_1002780 Ga0209455_10027803 242
174 3300025904 Ga0207647_10000076 Ga0207647_100000762 242
175 3300025904 Ga0207647_10041142 Ga0207647_100411422 242
176 3300025909 Ga0207705_10000036 Ga0207705_1000003682 242
177 3300025911 Ga0207654_10010617 Ga0207654_100106174 242
178 3300025911 Ga0207654_10271032 Ga0207654_102710321 242
179 3300025913 Ga0207695_10000013 Ga0207695_1000001323 242
180 3300025913 Ga0207695_10012457 Ga0207695_100124572 242
181 3300025913 Ga0207695_10185629 Ga0207695_101856293 242
182 3300025913 Ga0207695_10217335 Ga0207695_102173352 242
183 3300025913 Ga0207695_10287304 Ga0207695_102873042 242
184 3300025913 Ga0207695_10662795 Ga0207695_106627951 242
185 3300025914 Ga0207671_10007184 Ga0207671_100071844 242
186 3300025914 Ga0207671_10011004 Ga0207671_100110042 242
187 3300025914 Ga0207671_10011316 Ga0207671_100113168 242
188 3300025914 Ga0207671_10013604 Ga0207671_100136043 242
189 3300025914 Ga0207671_10042583 Ga0207671_100425832 242
190 3300025917 Ga0207660_10056567 Ga0207660_100565672 242
191 3300025917 Ga0207660_10567127 Ga0207660_105671271 242
192 3300025919 Ga0207657_10051991 Ga0207657_100519912 242
193 3300025921 Ga0207652_10252644 Ga0207652_102526442 242
194 3300025921 Ga0207652_10523377 Ga0207652_105233772 242
195 3300025924 Ga0207694_10098123 Ga0207694_100981233 242
196 3300025927 Ga0207687_10120188 Ga0207687_101201882 242
197 3300025931 Ga0207644_10012499 Ga0207644_100124994 242
198 3300025932 Ga0207690_10007483 Ga0207690_100074833 242
199 3300025933 Ga0207706_10006487 Ga0207706_100064872 242
200 3300025934 Ga0207686_10253649 Ga0207686_102536491 242
201 3300025935 Ga0207709_10000033 Ga0207709_10000033131 242
202 3300025944 Ga0207661_10011177 Ga0207661_100111777 242
203 3300025949 Ga0207667_10000971 Ga0207667_1000097127 242
204 3300025949 Ga0207667_10014743 Ga0207667_100147438 242
205 3300025949 Ga0207667_10113776 Ga0207667_101137762 242
206 3300025981 Ga0207640_10224174 Ga0207640_102241742 242
207 3300025986 Ga0207658_10032169 Ga0207658_100321692 242
208 3300026023 Ga0207677_10383494 Ga0207677_103834942 242
209 3300026041 Ga0207639_10157328 Ga0207639_101573282 242
210 3300026067 Ga0207678_10132902 Ga0207678_101329022 242
211 3300026078 Ga0207702_10000507 Ga0207702_1000050733 242
212 3300026078 Ga0207702_10002698 Ga0207702_100026983 242
213 3300026078 Ga0207702_10005892 Ga0207702_100058929 242
214 3300026116 Ga0207674_10104871 Ga0207674_101048713 242
215 3300028379 Ga0268266_10000089 Ga0268266_1000008968 242
216 3300028381 Ga0268264_10192965 Ga0268264_101929652 242
217 3300028786 Ga0307517_10028099 Ga0307517_100280996 242
218 3300028794 Ga0307515_10001481 Ga0307515_1000148127 242
219 3300031507 Ga0307509_10192023 Ga0307509_101920231 242
220 3300031911 Ga0307412_10165505 Ga0307412_101655053 242
221 3300032004 Ga0307414_10000683 Ga0307414_100006836 242
222 3300032004 Ga0307414_10021028 Ga0307414_100210283 242
223 3300032005 Ga0307411_10120491 Ga0307411_101204913 242
224 3300037312 Ga0395899_0000659 Ga0395899_0000659_3771_4499 242
225 3300037312 Ga0395899_0001109 Ga0395899_0001109_11640_12371 242
226 3300037418 Ga0395900_0000277 Ga0395900_0000277_30281_31012 242
227 3300037418 Ga0395900_0001234 Ga0395900_0001234_9492_10223 242
228 3300037418 Ga0395900_0006864 Ga0395900_0006864_8365_9105 242
229 3300037466 Ga0395898_0001918 Ga0395898_0001918_6760_7491 242
230 3300037471 Ga0395905_0000001 Ga0395905_0000001_875528_876265 242
231 3300037471 Ga0395905_0000068 Ga0395905_0000068_60254_60985 242
232 3300037471 Ga0395905_0003090 Ga0395905_0003090_14480_15220 242
233 3300038443 Ga0395901_0000199 Ga0395901_0000199_7960_8691 242
234 3300038443 Ga0395901_0005268 Ga0395901_0005268_4679_5419 242
235 3300042005 Ga0439448_0004048 Ga0439448_0004048_62_793 242
236 3300044684 Ga0466966_0016086 Ga0466966_0016086_4148_4876 242
237 3300044693 Ga0466961_0009707 Ga0466961_0009707_573_1301 242
238 3300045049 Ga0466959_0242931 Ga0466959_0242931_499_1230 242
239 3300045051 Ga0451576_0008985 Ga0451576_0008985_562_1305 242
240 3300046454 Ga0495592_0009100 Ga0495592_0009100_868_1608 242
241 3300046459 Ga0495629_0118124 Ga0495629_0118124_199_933 242
242 3300046471 Ga0495650_0000014 Ga0495650_0000014_290999_291733 242
243 3300046492 Ga0495585_0003658 Ga0495585_0003658_2284_3018 242
244 3300046500 Ga0495596_0008567 Ga0495596_0008567_3594_4325 242
245 3300046506 Ga0495583_0029592 Ga0495583_0029592_1680_2414 242
246 3300046507 Ga0495606_0000528 Ga0495606_0000528_4867_5601 242
247 3300046507 Ga0495606_0018097 Ga0495606_0018097_1141_1938 242
248 3300046512 Ga0495610_0007323 Ga0495610_0007323_6403_7137 242
249 3300046512 Ga0495610_0123091 Ga0495610_0123091_242_976 242
250 3300046513 Ga0495616_0002812 Ga0495616_0002812_9400_10134 242
251 3300046513 Ga0495616_0005759 Ga0495616_0005759_1270_2004 242
252 3300046516 Ga0495628_0146798 Ga0495628_0146798_218_952 242
253 3300046523 Ga0495644_0024915 Ga0495644_0024915_553_1293 242
254 3300046524 Ga0495648_0011532 Ga0495648_0011532_1150_1884 242
255 3300046524 Ga0495648_0024481 Ga0495648_0024481_1201_1935 242
256 3300046524 Ga0495648_0025358 Ga0495648_0025358_283_1017 242
257 3300046529 Ga0495652_0083935 Ga0495652_0083935_408_1157 242
258 3300046529 Ga0495652_0177690 Ga0495652_0177690_869_1603 242
259 3300046538 Ga0495609_0005281 Ga0495609_0005281_1050_1784 242
260 3300046558 Ga0495633_0000035 Ga0495633_0000035_120808_121542 242
261 3300046558 Ga0495633_0013635 Ga0495633_0013635_2269_3003 242
262 3300046660 Ga0495625_0000009 Ga0495625_0000009_335671_336405 242
263 3300046660 Ga0495625_0001432 Ga0495625_0001432_7274_8008 242
264 3300046660 Ga0495625_0003222 Ga0495625_0003222_3629_4363 242
265 3300046660 Ga0495625_0014899 Ga0495625_0014899_3446_4174 242
266 3300046660 Ga0495625_0047262 Ga0495625_0047262_1677_2411 242
267 3300046665 Ga0495661_0030416 Ga0495661_0030416_242_976 242
268 3300046684 Ga0495669_0068743 Ga0495669_0068743_306_1034 242
269 3300046694 Ga0495649_0000002 Ga0495649_0000002_1062659_1063393 242
270 3300046809 Ga0495600_0207076 Ga0495600_0207076_19_759 242
271 3300046810 Ga0495660_0153824 Ga0495660_0153824_151_885 242
272 3300047443 Ga0495687_001120 Ga0495687_001120_15967_16701 242
273 3300047443 Ga0495687_006439 Ga0495687_006439_1497_2228 242
274 3300047446 Ga0495679_070471 Ga0495679_070471_178_912 242
275 3300047472 Ga0495686_0001209 Ga0495686_0001209_13858_14586 242
276 3300047472 Ga0495686_0001825 Ga0495686_0001825_6983_7723 242
277 3300048928 Ga0496125_0211756 Ga0496125_0211756_129_872 242
278 3300049459 Ga0495678_004035 Ga0495678_004035_76_810 242
279 3300049663 Ga0501223_007920 Ga0501223_007920_766_1524 242
280 3300049758 Ga0501241_013932 Ga0501241_013932_101_835 242
281 3300050493 nmdc:mga0k408_260_c1 nmdc:mga0k408_260_c1_15769_16497 242
282 3300050493 nmdc:mga0k408_5126_c1 nmdc:mga0k408_5126_c1_4058_4792 242
283 3300050493 nmdc:mga0k408_859_c1 nmdc:mga0k408_859_c1_5874_6608 242
284 3300053080 Ga0500635_0012138 Ga0500635_0012138_1613_2371 242
285 3300053122 Ga0500608_000203 Ga0500608_000203_14523_15257 242
286 3300053125 Ga0500618_000037 Ga0500618_000037_684_1418 242
287 3300053125 Ga0500618_011873 Ga0500618_011873_960_1694 242
288 3300053153 Ga0500616_0119645 Ga0500616_0119645_83_811 242
289 3300053157 Ga0500624_001049 Ga0500624_001049_1201_1935 242
290 iso_pu_bacteria 2932082852 2932085623 242

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02348

CTP_transf_3

Cytidylyltransferase

26

242

0.95

PF12804

NTP_transf_3

MobA-like NTP transferase domain

31

231

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gq9-assembly1.cif.gz_B the structure of cmp:2-keto-3-deoxy-manno-octonic acid synthetase complexed with ctp at 100k 0.9597 1 240
4xwi-assembly1.cif.gz_A x-ray crystal structure of cmp-kdo synthase from pseudomonas aeruginosa 0.9336 1 242
4xwi-assembly1.cif.gz_A x-ray crystal structure of cmp-kdo synthase from pseudomonas aeruginosa 0.9299 1 242
1gq9-assembly1.cif.gz_B the structure of cmp:2-keto-3-deoxy-manno-octonic acid synthetase complexed with ctp at 100k 0.9248 1 240
3oam-assembly2.cif.gz_D crystal structure of cytidylyltransferase from vibrio cholerae 0.9224 1 240
ID Description Score Start End Superfamily
1h7eA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9511 1 240 3.90.550.10
af_I1LT34_51_301_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9174 2 240 3.90.550.10
2y6pC00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9162 4 240 3.90.550.10
3k8eD00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9156 4 240 3.90.550.10
1h7eA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.913 1 240 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A7K1YC82-F1-model_v4 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) (CMP-2-keto-3-deoxyoctulosonic acid synthase) (CKS) (CMP-KDO synthase) 0.9983 1 239 GO:0005829
GO:0008690
GO:0009103
GO:0033468
AF-A0A520HIB7-F1-model_v4 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) 0.9966 1 209 GO:0005829
GO:0008690
GO:0009103
AF-A0A519STH2-F1-model_v4 3-deoxy-manno-octulosonate cytidylyltransferase 0.9903 1 146 GO:0005829
GO:0008690
GO:0009103
AF-A0A1X0YJI9-F1-model_v4 deleted 0.9892 2 115
AF-A0A2V9X5L1-F1-model_v4 3-deoxy-manno-octulosonate cytidylyltransferase 0.9889 1 113 GO:0005829
GO:0008690
GO:0009103

Feature Viewer

pLDDT pTM Quality
95.1 0.91 High
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Predicted Structure (AlphaFold2)

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