F389972

General Info

Members Datasets Scaffolds Average Seq Length
290 185 580 412

Family's Representative Sequence

Representative Sequence 3300046664|Ga0495659_0000982|Ga0495659_0000982_5408_6775
Length 455
Sequence MPARIRVGLLGCGVVGGGLVRLLEARARAVEHAVGAPVAVTRLAVRDKSRRREVPLKGVEIGTDPMEVANAPDVDVLVELMGGAETAFPPVMRALQRGLPVVTANKLLISVHGAELDAAAAASGAPLRYEASVAGVIPVLQALDHGLRTERFTLLVGILNGTTNYILSTMEREGRDFEEALTAARELGYAEADPTLDLSGADTAQKLTILARRAFQAAVPHESIPTEGIVGIELEDLRQADRFGYIVKLLGIGLRSSEGLDLRVHPAFIPKRYLLASVRDEFNGVYLRGEASGSMLLYGKGAGALPTAQAVLGDVINVSRELLLRGITERETVGAGGGSLREADAAWPRPATTAKKASALPADDERLPLDEVRTKYYLRLTVEDQPGVLAQIAHRLGASRVSVAQMHQAPSVRGQAAITMMTHETRDKDAREAVAAIKSLPTVLKGPRAIRIFDL

Samples

Sample ID Description Type Environment
1 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
89 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
90 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
91 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
92 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
93 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
94 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
95 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
96 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
97 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
98 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
99 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
100 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
101 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
102 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
103 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
116 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
117 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
118 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
119 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
120 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
121 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
122 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
123 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
124 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
125 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
126 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
127 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
128 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
129 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
130 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
131 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
132 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
133 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
134 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
137 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
138 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
139 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
140 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
141 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
142 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
143 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
144 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
145 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
146 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
147 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
150 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
151 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
152 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
153 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
154 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
155 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
156 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
164 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
165 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
166 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
167 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
168 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
169 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
170 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
171 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
172 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
173 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
174 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
175 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
176 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
177 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
178 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
179 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
180 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
181 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
182 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
183 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.31
Metatranscriptomes 0.34
Isolates 0.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.83
Nodule 0
Rhizoplane 7.59
Rhizosphere 86.9
Stem 0
Stem Tuber 0
Unclassified 0.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495659_0000982 3300046664 Bacteria 9992
2 JGI24746J21847_1000086 3300001977 Bacteria 10115
3 Ga0068869_100200307 3300005334 Bacteria 1574
4 Ga0070680_100140297 3300005336 Bacteria 2026
5 Ga0068868_100000104 3300005338 Bacteria 52249
6 Ga0068868_100112244 3300005338 Bacteria 2216
7 Ga0068868_100224945 3300005338 Bacteria 1572
8 Ga0070689_100040458 3300005340 Bacteria 3574
9 Ga0070691_10000275 3300005341 Bacteria 17919
10 Ga0070674_100000019 3300005356 Bacteria 89350
11 Ga0070674_100000030 3300005356 Bacteria 69481
12 Ga0070688_100000316 3300005365 Bacteria 24693
13 Ga0070659_100147258 3300005366 Bacteria 1919
14 Ga0070703_10008962 3300005406 Bacteria 2821
15 Ga0070703_10026410 3300005406 Archaea 1726
16 Ga0070714_100123099 3300005435 Bacteria 2309
17 Ga0070714_100165140 3300005435 Bacteria 2006
18 Ga0070713_100000023 3300005436 Bacteria 98528
19 Ga0070711_100004207 3300005439 Bacteria 8459
20 Ga0070705_100018928 3300005440 Bacteria 3616
21 Ga0070700_100087183 3300005441 Bacteria 2028
22 Ga0070662_100000001 3300005457 Bacteria 317995
23 Ga0070685_10000032 3300005466 Bacteria 84253
24 Ga0070706_100005988 3300005467 Bacteria 11497
25 Ga0070707_100080301 3300005468 Bacteria 3148
26 Ga0070699_100001136 3300005518 Bacteria 24733
27 Ga0070699_100116214 3300005518 Bacteria 2351
28 Ga0070684_100108041 3300005535 Bacteria 2493
29 Ga0070697_100258355 3300005536 Bacteria 1491
30 Ga0070695_100029348 3300005545 Bacteria 3417
31 Ga0070695_100102943 3300005545 Bacteria 1926
32 Ga0070696_100000409 3300005546 Bacteria 26728
33 Ga0070696_100017612 3300005546 Bacteria 4823
34 Ga0070696_100059549 3300005546 Bacteria 2669
35 Ga0070704_100230777 3300005549 Bacteria 1510
36 Ga0068856_100035528 3300005614 Bacteria 4885
37 Ga0068852_100000037 3300005616 Bacteria 97602
38 Ga0068859_100000736 3300005617 Bacteria 32973
39 Ga0068864_100000043 3300005618 Bacteria 162928
40 Ga0068864_100029734 3300005618 Bacteria 4629
41 Ga0068866_10000382 3300005718 Bacteria 20838
42 Ga0068866_10093612 3300005718 Bacteria 1642
43 Ga0068863_100002888 3300005841 Bacteria 17015
44 Ga0068863_100105341 3300005841 Bacteria 2683
45 Ga0068858_100000017 3300005842 Bacteria 186913
46 Ga0081455_10025005 3300005937 Bacteria 5518
47 Ga0081538_10000045 3300005981 Bacteria 114622
48 Ga0075365_10001163 3300006038 Bacteria 11550
49 Ga0075365_10007643 3300006038 Bacteria 6074
50 Ga0075365_10036562 3300006038 Bacteria 3182
51 Ga0075365_10091521 3300006038 Bacteria 2073
52 Ga0075365_10141439 3300006038 Bacteria 1670
53 Ga0075364_10036609 3300006051 Bacteria 3174
54 Ga0075364_10088154 3300006051 Bacteria 2057
55 Ga0075364_10110471 3300006051 Bacteria 1834
56 Ga0075428_100017404 3300006844 Bacteria 7945
57 Ga0075428_100326368 3300006844 Bacteria 1649
58 Ga0075430_100026848 3300006846 Bacteria 4897
59 Ga0075431_100000747 3300006847 Bacteria 28086
60 Ga0075431_100023665 3300006847 Bacteria 6288
61 Ga0075431_100091739 3300006847 Bacteria 3135
62 Ga0075431_100232936 3300006847 Bacteria 1876
63 Ga0075433_10000021 3300006852 Bacteria 60563
64 Ga0075433_10000553 3300006852 Bacteria 24618
65 Ga0075433_10007173 3300006852 Bacteria 8827
66 Ga0075433_10007683 3300006852 Bacteria 8564
67 Ga0075433_10192941 3300006852 Bacteria 1812
68 Ga0075433_10201414 3300006852 Bacteria 1770
69 Ga0075434_100001171 3300006871 Bacteria 21716
70 Ga0075434_100008408 3300006871 Bacteria 9597
71 Ga0075434_100028328 3300006871 Bacteria 5502
72 Ga0075429_100012152 3300006880 Bacteria 7463
73 Ga0068865_100000081 3300006881 Bacteria 51047
74 Ga0075436_100000826 3300006914 Bacteria 20629
75 Ga0075436_100019828 3300006914 Bacteria 4611
76 Ga0097620_100000736 3300006931 Bacteria 32973
77 Ga0075435_100000298 3300007076 Bacteria 30730
78 Ga0075435_100112925 3300007076 Bacteria 2261
79 Ga0111539_10015259 3300009094 Bacteria 9567
80 Ga0111539_10025139 3300009094 Bacteria 7300
81 Ga0105245_10000249 3300009098 Bacteria 51282
82 Ga0105245_10000330 3300009098 Bacteria 44516
83 Ga0105245_10087597 3300009098 Bacteria 2858
84 Ga0114129_10036729 3300009147 Bacteria 6917
85 Ga0114129_10084255 3300009147 Bacteria 4414
86 Ga0105248_10000017 3300009177 Bacteria 298089
87 Ga0105248_10018907 3300009177 Bacteria 7618
88 Ga0105249_10000054 3300009553 Bacteria 162883
89 Ga0105239_10024700 3300010375 Bacteria 6619
90 Ga0157371_10007427 3300013102 Bacteria 8875
91 Ga0157370_10056159 3300013104 Bacteria 3747
92 Ga0157369_10000105 3300013105 Bacteria 117996
93 Ga0163162_10065874 3300013306 Bacteria 3671
94 Ga0163162_10145397 3300013306 Bacteria 2487
95 Ga0157380_10035572 3300014326 Bacteria 3848
96 Ga0157380_10057439 3300014326 Bacteria 3099
97 Ga0157379_10056220 3300014968 Bacteria 3516
98 Ga0163161_10000240 3300017792 Bacteria 49520
99 Ga0206356_11454333 3300020070 Bacteria 1735
100 Ga0207653_10012313 3300025885 Bacteria 2670
101 Ga0207642_10000500 3300025899 Bacteria 12040
102 Ga0207642_10044533 3300025899 Bacteria 1965
103 Ga0207684_10081050 3300025910 Bacteria 2761
104 Ga0207663_10002113 3300025916 Bacteria 9474
105 Ga0207663_10207164 3300025916 Unclassified 1418
106 Ga0207646_10060211 3300025922 Bacteria 3391
107 Ga0207681_10083782 3300025923 Bacteria 2258
108 Ga0207687_10000106 3300025927 Bacteria 61275
109 Ga0207700_10000003 3300025928 Bacteria 500797
110 Ga0207664_10143283 3300025929 Bacteria 2024
111 Ga0207664_10155382 3300025929 Bacteria 1947
112 Ga0207706_10000003 3300025933 Bacteria 345011
113 Ga0207686_10000035 3300025934 Bacteria 130483
114 Ga0207670_10067247 3300025936 Bacteria 2465
115 Ga0207669_10000029 3300025937 Bacteria 88351
116 Ga0207704_10000018 3300025938 Bacteria 153994
117 Ga0207665_10065366 3300025939 Bacteria 2473
118 Ga0207691_10138833 3300025940 Bacteria 2143
119 Ga0207711_10000011 3300025941 Bacteria 518817
120 Ga0207711_10070955 3300025941 Bacteria 3021
121 Ga0207689_10212290 3300025942 Bacteria 1599
122 Ga0207712_10000032 3300025961 Bacteria 210628
123 Ga0207677_10000479 3300026023 Bacteria 26103
124 Ga0207677_10103681 3300026023 Bacteria 2100
125 Ga0207703_10000030 3300026035 Bacteria 199014
126 Ga0207703_10003719 3300026035 Bacteria 12695
127 Ga0207708_10167455 3300026075 Bacteria 1738
128 Ga0207708_10200298 3300026075 Bacteria 1593
129 Ga0207702_10003965 3300026078 Bacteria 13291
130 Ga0207676_10000042 3300026095 Bacteria 163475
131 Ga0207675_100015600 3300026118 Bacteria 7086
132 Ga0207698_10000015 3300026142 Bacteria 207368
133 Ga0207698_10199122 3300026142 Bacteria 1792
134 Ga0265337_1000101 3300028556 Bacteria 42173
135 Ga0265326_10000033 3300028558 Bacteria 91972
136 Ga0265319_1000544 3300028563 Bacteria 25627
137 Ga0265322_10000005 3300028654 Bacteria 246112
138 Ga0265336_10025123 3300028666 Bacteria 1877
139 Ga0265324_10000207 3300029957 Bacteria 44991
140 Ga0265328_10001194 3300031239 Bacteria 12029
141 Ga0265320_10000010 3300031240 Bacteria 250501
142 Ga0265320_10073585 3300031240 Bacteria 1605
143 Ga0265339_10026670 3300031249 Bacteria 3308
144 Ga0265331_10000869 3300031250 Bacteria 24602
145 Ga0265327_10000040 3300031251 Bacteria 291052
146 Ga0265314_10000208 3300031711 Bacteria 86855
147 Ga0265342_10112281 3300031712 Bacteria 1541
148 Ga0316576_10003053 3300031727 Bacteria 9742
149 Ga0307407_10121628 3300031903 Bacteria 1656
150 Ga0307415_100008232 3300032126 Bacteria 5770
151 Ga0373937_0225605 3300036401 Bacteria 1764
152 Ga0395900_0007489 3300037418 Bacteria 11275
153 Ga0395898_0017304 3300037466 Bacteria 7364
154 Ga0395898_0046905 3300037466 Bacteria 4243
155 Ga0395905_0006892 3300037471 Bacteria 11360
156 Ga0395901_0004047 3300038443 Bacteria 14767
157 Ga0395901_0070917 3300038443 Bacteria 3630
158 Ga0395901_0186233 3300038443 Bacteria 2177
159 Ga0451577_0053868 3300042876 Bacteria 3591
160 Ga0451577_0057678 3300042876 Bacteria 3461
161 Ga0466963_0000012 3300044694 Bacteria 62839
162 Ga0466963_0032248 3300044694 Bacteria 3391
163 Ga0453684_0320916 3300044712 Unclassified 1754
164 Ga0453684_0359358 3300044712 Bacteria 1640
165 Ga0466957_0004548 3300044842 Bacteria 7745
166 Ga0466957_0191282 3300044842 Bacteria 1341
167 Ga0451576_0004460 3300045051 Bacteria 18151
168 Ga0451576_0150086 3300045051 Bacteria 2431
169 Ga0466967_0053962 3300045976 Bacteria 3535
170 Ga0466967_0069342 3300045976 Bacteria 3151
171 Ga0466967_0181732 3300045976 Bacteria 1984
172 Ga0495629_0012421 3300046459 Bacteria 6167
173 Ga0495629_0014825 3300046459 Bacteria 5606
174 Ga0495653_0013362 3300046463 Bacteria 6691
175 Ga0495582_0000002 3300046473 Bacteria 219909
176 Ga0495639_0008837 3300046475 Bacteria 4321
177 Ga0495662_0000130 3300046476 Bacteria 28303
178 Ga0495608_0000013 3300046511 Bacteria 228481
179 Ga0495608_0000346 3300046511 Bacteria 32424
180 Ga0495608_0108909 3300046511 Bacteria 1782
181 Ga0495618_0000218 3300046514 Bacteria 41741
182 Ga0495628_0036439 3300046516 Bacteria 3948
183 Ga0495630_0001724 3300046517 Bacteria 15254
184 Ga0495630_0003792 3300046517 Bacteria 10541
185 Ga0495644_0001063 3300046523 Bacteria 11437
186 Ga0495640_0020061 3300046533 Bacteria 4927
187 Ga0495586_0063940 3300046535 Bacteria 2005
188 Ga0495587_0001663 3300046536 Bacteria 14848
189 Ga0495598_0035441 3300046537 Bacteria 1428
190 Ga0495621_0010327 3300046539 Bacteria 2852
191 Ga0495645_0021391 3300046543 Bacteria 4675
192 Ga0495667_0000019 3300046559 Bacteria 181645
193 Ga0495634_0001012 3300046642 Bacteria 26406
194 Ga0495634_0073903 3300046642 Bacteria 2241
195 Ga0495635_0008494 3300046663 Bacteria 7174
196 Ga0495657_0000003 3300046675 Bacteria 279680
197 Ga0495657_0007033 3300046675 Bacteria 8727
198 Ga0495657_0058393 3300046675 Bacteria 2562
199 Ga0495658_0000001 3300046683 Bacteria 385362
200 Ga0495658_0000378 3300046683 Bacteria 24970
201 Ga0495658_0002902 3300046683 Bacteria 8612
202 Ga0495670_0017390 3300046691 Bacteria 3537
203 Ga0495600_0000652 3300046809 Bacteria 18003
204 Ga0495600_0046515 3300046809 Bacteria 2831
205 Ga0495604_0000104 3300047317 Bacteria 71390
206 Ga0495674_0000024 3300047319 Bacteria 141746
207 Ga0495676_0037445 3300047321 Bacteria 4037
208 Ga0495680_0007564 3300047322 Bacteria 9935
209 Ga0495680_0115715 3300047322 Bacteria 1984
210 Ga0495675_0000094 3300047444 Bacteria 63338
211 Ga0495675_0022797 3300047444 Bacteria 3992
212 Ga0496102_0000438 3300048905 Bacteria 47526
213 Ga0496103_0000001 3300048906 Bacteria 643471
214 Ga0496104_0000008 3300048907 Bacteria 516976
215 Ga0496104_0000034 3300048907 Bacteria 186572
216 Ga0496105_0000003 3300048908 Bacteria 713251
217 Ga0496105_0000386 3300048908 Bacteria 28919
218 Ga0496108_0000349 3300048911 Bacteria 39032
219 Ga0496108_0007713 3300048911 Bacteria 8717
220 Ga0496108_0024518 3300048911 Bacteria 4967
221 Ga0496109_0000307 3300048912 Bacteria 46191
222 Ga0496109_0000333 3300048912 Bacteria 44006
223 Ga0496109_0105222 3300048912 Bacteria 2621
224 Ga0496110_0004422 3300048913 Bacteria 10888
225 Ga0496110_0030487 3300048913 Bacteria 4650
226 Ga0496110_0042435 3300048913 Bacteria 3970
227 Ga0496111_0000130 3300048914 Bacteria 33124
228 Ga0496111_0254446 3300048914 Bacteria 1303
229 Ga0496112_0000002 3300048915 Bacteria 782039
230 Ga0496113_0000017 3300048916 Bacteria 74327
231 Ga0496113_0000787 3300048916 Bacteria 16425
232 Ga0496115_0000022 3300048918 Bacteria 164224
233 Ga0496115_0019181 3300048918 Bacteria 5261
234 Ga0496121_0002858 3300048924 Bacteria 25455
235 Ga0496124_0135170 3300048927 Bacteria 1953
236 Ga0501034_0006344 3300049571 Bacteria 12740
237 Ga0501034_0261189 3300049571 Bacteria 1674
238 Ga0501036_0153837 3300049572 Bacteria 1940
239 Ga0501039_0027933 3300049575 Bacteria 4340
240 Ga0501040_0076271 3300049576 Bacteria 2318
241 Ga0501041_0087404 3300049577 Bacteria 1924
242 Ga0501042_0011248 3300049578 Bacteria 6032
243 Ga0501042_0023256 3300049578 Bacteria 4335
244 Ga0501042_0103639 3300049578 Bacteria 2047
245 Ga0501047_0030508 3300049581 Bacteria 5197
246 Ga0501067_0046474 3300049583 Bacteria 2410
247 Ga0501074_0112834 3300049590 Bacteria 1945
248 Ga0501075_0008072 3300049591 Bacteria 7320
249 Ga0501081_0047606 3300049743 Bacteria 2950
250 Ga0501081_0149073 3300049743 Bacteria 1680
251 Ga0501045_0100158 3300049824 Bacteria 2145
252 nmdc:mga00v17_36153_c1 3300050491 Bacteria 2942
253 nmdc:mga00v17_63205_c1 3300050491 Bacteria 2279
254 nmdc:mga0yw44_10795_c1 3300050492 Bacteria 4681
255 nmdc:mga0yw44_17975_c1 3300050492 Bacteria 3862
256 nmdc:mga0yw44_77202_c1 3300050492 Bacteria 2080
257 nmdc:mga05p37_94246_c1 3300050507 Bacteria 3689
258 nmdc:mga09592_9222_c1 3300050508 Bacteria 8025
259 nmdc:mga0qj67_372_c1 3300050509 Bacteria 30883
260 nmdc:mga06r32_24591_c1 3300050510 Bacteria 5594
261 nmdc:mga06r32_57758_c1 3300050510 Bacteria 3728
262 nmdc:mga06r32_93028_c1 3300050510 Bacteria 2948
263 nmdc:mga06r32_99254_c1 3300050510 Bacteria 2855
264 nmdc:mga08y16_38509_c1 3300050511 Bacteria 5021
265 nmdc:mga08y16_38545_c1 3300050511 Bacteria 5018
266 nmdc:mga0n895_1035_c1 3300050512 Bacteria 20230
267 nmdc:mga0n895_11286_c1 3300050512 Bacteria 7962
268 nmdc:mga0n895_27864_c2 3300050512 Bacteria 1951
269 nmdc:mga0rr50_623_c1 3300050513 Bacteria 19012
270 nmdc:mga08x19_5922_c1 3300050514 Bacteria 7232
271 nmdc:mga0a205_1461_c1 3300050515 Bacteria 20140
272 nmdc:mga0a205_146416_c1 3300050515 Bacteria 2262
273 nmdc:mga0a205_198951_c1 3300050515 Bacteria 1895
274 nmdc:mga0a205_31719_c1 3300050515 Bacteria 5064
275 nmdc:mga0a205_4_c1 3300050515 Bacteria 168154
276 nmdc:mga0a205_83_c1 3300050515 Bacteria 52257
277 Ga0495601_0003822 3300053077 Bacteria 8663
278 Ga0495601_0006771 3300053077 Bacteria 6714
279 Ga0495601_0017400 3300053077 Bacteria 4362
280 Ga0495612_0002233 3300053078 Bacteria 7962
281 Ga0495595_0000007 3300053084 Bacteria 228504
282 Ga0495595_0000148 3300053084 Bacteria 28375
283 Ga0495619_0000001 3300053085 Bacteria 586054
284 Ga0495619_0000413 3300053085 Bacteria 29033
285 Ga0495619_0000747 3300053085 Bacteria 21190
286 Ga0495619_0001241 3300053085 Bacteria 16706
287 Ga0495619_0003870 3300053085 Bacteria 9621
288 Ga0500566_0052922 3300053094 Bacteria 2318
289 Ga0501084_0162875 3300054114 Archaea 1882
290 2524001072 2523533628 Bacteria 4098242
291 Ga0495659_0000982
292 JGI24746J21847_1000086
293 Ga0068869_100200307
294 Ga0070680_100140297
295 Ga0068868_100000104
296 Ga0068868_100112244
297 Ga0068868_100224945
298 Ga0070689_100040458
299 Ga0070691_10000275
300 Ga0070674_100000019
301 Ga0070674_100000030
302 Ga0070688_100000316
303 Ga0070659_100147258
304 Ga0070703_10008962
305 Ga0070703_10026410
306 Ga0070714_100123099
307 Ga0070714_100165140
308 Ga0070713_100000023
309 Ga0070711_100004207
310 Ga0070705_100018928
311 Ga0070700_100087183
312 Ga0070662_100000001
313 Ga0070685_10000032
314 Ga0070706_100005988
315 Ga0070707_100080301
316 Ga0070699_100001136
317 Ga0070699_100116214
318 Ga0070684_100108041
319 Ga0070697_100258355
320 Ga0070695_100029348
321 Ga0070695_100102943
322 Ga0070696_100000409
323 Ga0070696_100017612
324 Ga0070696_100059549
325 Ga0070704_100230777
326 Ga0068856_100035528
327 Ga0068852_100000037
328 Ga0068859_100000736
329 Ga0068864_100000043
330 Ga0068864_100029734
331 Ga0068866_10000382
332 Ga0068866_10093612
333 Ga0068863_100002888
334 Ga0068863_100105341
335 Ga0068858_100000017
336 Ga0081455_10025005
337 Ga0081538_10000045
338 Ga0075365_10001163
339 Ga0075365_10007643
340 Ga0075365_10036562
341 Ga0075365_10091521
342 Ga0075365_10141439
343 Ga0075364_10036609
344 Ga0075364_10088154
345 Ga0075364_10110471
346 Ga0075428_100017404
347 Ga0075428_100326368
348 Ga0075430_100026848
349 Ga0075431_100000747
350 Ga0075431_100023665
351 Ga0075431_100091739
352 Ga0075431_100232936
353 Ga0075433_10000021
354 Ga0075433_10000553
355 Ga0075433_10007173
356 Ga0075433_10007683
357 Ga0075433_10192941
358 Ga0075433_10201414
359 Ga0075434_100001171
360 Ga0075434_100008408
361 Ga0075434_100028328
362 Ga0075429_100012152
363 Ga0068865_100000081
364 Ga0075436_100000826
365 Ga0075436_100019828
366 Ga0097620_100000736
367 Ga0075435_100000298
368 Ga0075435_100112925
369 Ga0111539_10015259
370 Ga0111539_10025139
371 Ga0105245_10000249
372 Ga0105245_10000330
373 Ga0105245_10087597
374 Ga0114129_10036729
375 Ga0114129_10084255
376 Ga0105248_10000017
377 Ga0105248_10018907
378 Ga0105249_10000054
379 Ga0105239_10024700
380 Ga0157371_10007427
381 Ga0157370_10056159
382 Ga0157369_10000105
383 Ga0163162_10065874
384 Ga0163162_10145397
385 Ga0157380_10035572
386 Ga0157380_10057439
387 Ga0157379_10056220
388 Ga0163161_10000240
389 Ga0206356_11454333
390 Ga0207653_10012313
391 Ga0207642_10000500
392 Ga0207642_10044533
393 Ga0207684_10081050
394 Ga0207663_10002113
395 Ga0207663_10207164
396 Ga0207646_10060211
397 Ga0207681_10083782
398 Ga0207687_10000106
399 Ga0207700_10000003
400 Ga0207664_10143283
401 Ga0207664_10155382
402 Ga0207706_10000003
403 Ga0207686_10000035
404 Ga0207670_10067247
405 Ga0207669_10000029
406 Ga0207704_10000018
407 Ga0207665_10065366
408 Ga0207691_10138833
409 Ga0207711_10000011
410 Ga0207711_10070955
411 Ga0207689_10212290
412 Ga0207712_10000032
413 Ga0207677_10000479
414 Ga0207677_10103681
415 Ga0207703_10000030
416 Ga0207703_10003719
417 Ga0207708_10167455
418 Ga0207708_10200298
419 Ga0207702_10003965
420 Ga0207676_10000042
421 Ga0207675_100015600
422 Ga0207698_10000015
423 Ga0207698_10199122
424 Ga0265337_1000101
425 Ga0265326_10000033
426 Ga0265319_1000544
427 Ga0265322_10000005
428 Ga0265336_10025123
429 Ga0265324_10000207
430 Ga0265328_10001194
431 Ga0265320_10000010
432 Ga0265320_10073585
433 Ga0265339_10026670
434 Ga0265331_10000869
435 Ga0265327_10000040
436 Ga0265314_10000208
437 Ga0265342_10112281
438 Ga0316576_10003053
439 Ga0307407_10121628
440 Ga0307415_100008232
441 Ga0373937_0225605
442 Ga0395900_0007489
443 Ga0395898_0017304
444 Ga0395898_0046905
445 Ga0395905_0006892
446 Ga0395901_0004047
447 Ga0395901_0070917
448 Ga0395901_0186233
449 Ga0451577_0053868
450 Ga0451577_0057678
451 Ga0466963_0000012
452 Ga0466963_0032248
453 Ga0453684_0320916
454 Ga0453684_0359358
455 Ga0466957_0004548
456 Ga0466957_0191282
457 Ga0451576_0004460
458 Ga0451576_0150086
459 Ga0466967_0053962
460 Ga0466967_0069342
461 Ga0466967_0181732
462 Ga0495629_0012421
463 Ga0495629_0014825
464 Ga0495653_0013362
465 Ga0495582_0000002
466 Ga0495639_0008837
467 Ga0495662_0000130
468 Ga0495608_0000013
469 Ga0495608_0000346
470 Ga0495608_0108909
471 Ga0495618_0000218
472 Ga0495628_0036439
473 Ga0495630_0001724
474 Ga0495630_0003792
475 Ga0495644_0001063
476 Ga0495640_0020061
477 Ga0495586_0063940
478 Ga0495587_0001663
479 Ga0495598_0035441
480 Ga0495621_0010327
481 Ga0495645_0021391
482 Ga0495667_0000019
483 Ga0495634_0001012
484 Ga0495634_0073903
485 Ga0495635_0008494
486 Ga0495657_0000003
487 Ga0495657_0007033
488 Ga0495657_0058393
489 Ga0495658_0000001
490 Ga0495658_0000378
491 Ga0495658_0002902
492 Ga0495670_0017390
493 Ga0495600_0000652
494 Ga0495600_0046515
495 Ga0495604_0000104
496 Ga0495674_0000024
497 Ga0495676_0037445
498 Ga0495680_0007564
499 Ga0495680_0115715
500 Ga0495675_0000094
501 Ga0495675_0022797
502 Ga0496102_0000438
503 Ga0496103_0000001
504 Ga0496104_0000008
505 Ga0496104_0000034
506 Ga0496105_0000003
507 Ga0496105_0000386
508 Ga0496108_0000349
509 Ga0496108_0007713
510 Ga0496108_0024518
511 Ga0496109_0000307
512 Ga0496109_0000333
513 Ga0496109_0105222
514 Ga0496110_0004422
515 Ga0496110_0030487
516 Ga0496110_0042435
517 Ga0496111_0000130
518 Ga0496111_0254446
519 Ga0496112_0000002
520 Ga0496113_0000017
521 Ga0496113_0000787
522 Ga0496115_0000022
523 Ga0496115_0019181
524 Ga0496121_0002858
525 Ga0496124_0135170
526 Ga0501034_0006344
527 Ga0501034_0261189
528 Ga0501036_0153837
529 Ga0501039_0027933
530 Ga0501040_0076271
531 Ga0501041_0087404
532 Ga0501042_0011248
533 Ga0501042_0023256
534 Ga0501042_0103639
535 Ga0501047_0030508
536 Ga0501067_0046474
537 Ga0501074_0112834
538 Ga0501075_0008072
539 Ga0501081_0047606
540 Ga0501081_0149073
541 Ga0501045_0100158
542 nmdc:mga00v17_36153_c1
543 nmdc:mga00v17_63205_c1
544 nmdc:mga0yw44_10795_c1
545 nmdc:mga0yw44_17975_c1
546 nmdc:mga0yw44_77202_c1
547 nmdc:mga05p37_94246_c1
548 nmdc:mga09592_9222_c1
549 nmdc:mga0qj67_372_c1
550 nmdc:mga06r32_24591_c1
551 nmdc:mga06r32_57758_c1
552 nmdc:mga06r32_93028_c1
553 nmdc:mga06r32_99254_c1
554 nmdc:mga08y16_38509_c1
555 nmdc:mga08y16_38545_c1
556 nmdc:mga0n895_1035_c1
557 nmdc:mga0n895_11286_c1
558 nmdc:mga0n895_27864_c2
559 nmdc:mga0rr50_623_c1
560 nmdc:mga08x19_5922_c1
561 nmdc:mga0a205_1461_c1
562 nmdc:mga0a205_146416_c1
563 nmdc:mga0a205_198951_c1
564 nmdc:mga0a205_31719_c1
565 nmdc:mga0a205_4_c1
566 nmdc:mga0a205_83_c1
567 Ga0495601_0003822
568 Ga0495601_0006771
569 Ga0495601_0017400
570 Ga0495612_0002233
571 Ga0495595_0000007
572 Ga0495595_0000148
573 Ga0495619_0000001
574 Ga0495619_0000413
575 Ga0495619_0000747
576 Ga0495619_0001241
577 Ga0495619_0003870
578 Ga0500566_0052922
579 Ga0501084_0162875
580 2524001072

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00742

Homoserine_dh

Homoserine dehydrogenase

138

316

0.99

PF01842

ACT

ACT domain

376

442

0.97

PF03447

NAD_binding_3

Homoserine dehydrogenase, NAD binding domain

11

130

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6dzs-assembly1.cif.gz_A mycobacterial homoserine dehydrogenase thra in complex with nadp 0.9508 4 403
6dzs-assembly2.cif.gz_C mycobacterial homoserine dehydrogenase thra in complex with nadp 0.9498 4 403
6dzs-assembly2.cif.gz_D mycobacterial homoserine dehydrogenase thra in complex with nadp 0.9485 4 403
3mtj-assembly1.cif.gz_A the crystal structure of a homoserine dehydrogenase from thiobacillus denitrificans to 2.15a 0.944 4 404
6dzs-assembly1.cif.gz_B mycobacterial homoserine dehydrogenase thra in complex with nadp 0.9363 4 403
ID Description Score Start End Superfamily
af_Q2FYV4_151_297_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9752 138 282 3.30.360.10
af_P27249_815_877_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9628 328 372 3.30.70.260
3mtjA02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9585 123 282 3.30.360.10
af_Q2FYV4_151_297_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9558 138 282 3.30.360.10
af_P9WPX1_139_304_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9529 123 282 3.30.360.10
ID Description Score Start End GO Terms
AF-A0A7K0S100-F1-model_v4 Homoserine dehydrogenase (EC 1.1.1.3) 0.975 1 292 GO:0004412
GO:0009086
GO:0009088
GO:0050661
AF-A0A435XNI5-F1-model_v4 Homoserine dehydrogenase (EC 1.1.1.3) 0.9703 149 288 GO:0004412
GO:0009088
AF-A0A7K0S100-F1-model_v4 Homoserine dehydrogenase (EC 1.1.1.3) 0.9685 1 292 GO:0004412
GO:0009086
GO:0009088
GO:0050661
AF-A0A1L5KU37-F1-model_v4 Homoserine dehydrogenase (EC 1.1.1.3) 0.9684 134 403 GO:0004412
GO:0009086
GO:0009088
AF-A0A7Y5XUF6-F1-model_v4 Homoserine dehydrogenase (EC 1.1.1.3) 0.9668 2 249 GO:0004412
GO:0009086
GO:0009088
GO:0050661

Map