F390096

General Info

Members Datasets Scaffolds Average Seq Length
290 230 176 485

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2919513703|2919514425
Length 545
Sequence YQGIPLNFSPTLRQEWFGNVRGDLLSGLVVALALIPEAIAFSIIAGVDPSVGLYASFCIAVVIAFTGGRPGMISAATGAMALVMVTLVRDHGLQYLLAATLLTGVLQIVAGALKLGALMRFVSRSVITGFVNALAILIFMAQIPELIGVPALVYPMVALGLAIIYGLPWLGRLTFPGVGLLLLVIGFALTFGSMEPRLLYVVAVLGLAAVALLFRWTRNLVVPAPLVAIVLLTGLALYFGLVVPTVGDKGALPDSLPVFLFPDVPLTLETLWIILPVSLTLTVVGLLESLLTAQIVDDLTDTPSNKNRECAGQGVANIAAGFLGGMAGCAMIGQSVINVKSGGRGRLSCLVAGVVLLMLVVFAGPWVATIPMAALVAVMVMVSIGTFSWSSIKQLRTHPGTSSIVMLGTVIVTVATHDLAKGVLTGVLLSALFFARKVSRVLHIGSTADGAARTYVVTGQVFFASSERFVSAFDFREVLERVTIDVSAAHFWDLSAVGALDKVVLKFRREGTHVDIVGLDAASATIVDRLGVHDKPDAERLMGGH

Samples

Sample ID Description Type Environment
1 2209111006 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0 v1 Metagenome Rhizosphere
2 2508501050 Microvirga lupini Lut6 Isolate Nodule
3 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
4 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
5 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
6 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
7 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
8 2599185155 Pseudomonas sp. NFACC10-1 Isolate Rhizoplane
9 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
10 2639762793 Acinetobacter calcoaceticus GK1 Isolate Rhizosphere
11 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
12 2643221665 Acinetobacter sp. Root1280 Isolate Unclassified
13 2643221729 Bacillus sp. Root11 Isolate Unclassified
14 2643221730 Bacillus sp. Root131 Isolate Unclassified
15 2643221736 Bosea sp. Root483D1 Isolate Unclassified
16 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
17 2675903507 Acinetobacter calcoaceticus GK2 Isolate Unclassified
18 2684622632 Bacillus cereus 905 Isolate Unclassified
19 2690315857 Rheinheimera sp. EpRS3 Isolate Unclassified
20 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
21 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
22 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
23 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
24 2738541271 Pseudomonas sp. GV021 Isolate Unclassified
25 2738541358 Bacillus sp. OV752 Isolate Unclassified
26 2738543006 Bacillus sp. OK077 Isolate Unclassified
27 2738543016 Pseudomonas sp. GV012 Isolate Unclassified
28 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
29 2744054655 Acinetobacter sp. BMW17 Isolate Unclassified
30 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
31 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
32 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
33 2773857761 Acinetobacter sp. 3664 Isolate Unclassified
34 2773857770 Acinetobacter sp. 3636 Isolate Unclassified
35 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
36 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
37 2806310737 Pseudomonas mosselii BS011 Isolate Unclassified
38 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
39 2808606385 Pseudomonas sp. SJZ103 Isolate Rhizosphere
40 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
41 2808606388 Pseudomonas sp. SJZ094 Isolate Rhizosphere
42 2818991441 Niallia circulans 3243 Isolate Rhizosphere
43 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
44 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
45 2831905167 Ammoniphilus oxalaticus RAOx-1 Isolate Rhizosphere
46 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
47 2842815866 Pseudomonas sp. R-72210 Isolate Unclassified
48 2852612431 Pseudomonas sp. SJZ073 Isolate Rhizosphere
49 2852667396 Pseudomonas sp. JAI120 Isolate Rhizosphere
50 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
51 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
52 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
53 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
54 2860339153 Pseudomonas sp. JAI111 Isolate Rhizosphere
55 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
56 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
57 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
58 2874123672 Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 Isolate Nodule
59 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
60 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
61 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
62 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
63 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
64 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
65 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
66 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
67 2916699645 Acinetobacter ursingii M3 Isolate Unclassified
68 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
69 2919182534 Acinetobacter calcoaceticus 2589 Isolate Rhizosphere
70 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
71 2919513703 Luteimonas sp. 3794 Isolate Unclassified
72 2919534386 Rheinheimera pacifica 3879 Isolate Unclassified
73 2919675420 Luteimonas terrae 4099 Isolate Unclassified
74 2919726948 Bacillus pumilus 4489 Isolate Unclassified
75 2923634449 Enterobacter kobei SLBN-76 Isolate Rhizosphere
76 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
77 2928515477 Acinetobacter bereziniae 1375 Isolate Rhizosphere
78 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
79 2938917290 Bacillus sp. CR71 Isolate Unclassified
80 2952252522 Salinicola sp. DM10 Isolate Unclassified
81 2965761152 Bacillus sp. COPE52 Isolate Unclassified
82 2969141011 Bacillus velezensis MH25 Isolate Unclassified
83 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
84 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
85 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
86 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
87 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
88 2984568884 Acinetobacter baylyi SORGH_AS893 Isolate Aerial Root
89 2990196909 Pseudomonas mangrovi TC-11 Isolate Unclassified
90 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
91 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
92 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
93 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
94 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
95 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
96 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
97 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
98 3300005277 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0 v2 (version 2) Metagenome Rhizosphere
99 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
100 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
101 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
102 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
103 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
104 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
105 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
106 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
107 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
108 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
109 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
110 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
111 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
112 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
113 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
114 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
115 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
116 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
117 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
118 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
119 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
120 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
122 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
123 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
124 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
125 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
126 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
135 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
136 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
137 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
139 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
140 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
141 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
142 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
143 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
144 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
145 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
146 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
147 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
148 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
149 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
150 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
151 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
152 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
153 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
154 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
155 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
156 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
157 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
158 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
159 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
160 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
161 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
162 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
163 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
164 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
165 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
166 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
167 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
168 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
169 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
170 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
171 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
172 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
173 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
174 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
175 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
176 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
177 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
178 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
179 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
180 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
181 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
182 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
183 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
184 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
185 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
186 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
187 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
188 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
189 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
190 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
191 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
192 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
193 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
194 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
195 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
196 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
197 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
198 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
199 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
200 3300049132 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
201 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
202 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
203 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
204 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
205 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
206 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
207 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
208 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
209 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
210 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
211 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
212 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
213 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
214 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
215 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
216 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere
217 8022621104 Bacillus sp. PIC28 Isolate Rhizosphere
218 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
219 8022792930 Bacillus sp. Xin Isolate Rhizosphere
220 8023438354 Bacillus sp. BH2 Isolate Unclassified
221 8023444577 Bacillus sp. BH32 Isolate Unclassified
222 8033232454 Acinetobacter radioresistens SA188 Isolate Unclassified
223 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified
224 8048746797 Alcaligenes endophyticus DSM 100498 Isolate Unclassified
225 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
226 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
227 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified
228 8057160832 Larsenimonas rhizosphaerae GH2-1 Isolate Rhizosphere
229 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere
230 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 60.34
Metatranscriptomes 0.34
Isolates 39.31

Biome Distribution

Category Percentage (%)
Aerial Root 0.34
Bulb 0
Endosphere 6.9
Nodule 2.76
Rhizoplane 2.07
Rhizosphere 61.03
Stem 0
Stem Tuber 0
Unclassified 26.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 2214572718 2209111006 Bacteria 5871
2 JGI25154J39366_1000212 3300002738 Bacteria 40514
3 JGI25151J46595_10001560 3300003187 Bacteria 15292
4 JGI25151J46595_10006233 3300003187 Bacteria 6032
5 JGI25151J46595_10037980 3300003187 Bacteria 1798
6 rootH1_10233067 3300003323 Bacteria 1990
7 Ga0055536_1003482 3300003781 Bacteria 8438
8 Ga0058692_1000001 3300003856 Bacteria 834230
9 Ga0058692_1000005 3300003856 Bacteria 398815
10 Ga0065703_1000089 3300005272 Bacteria 24503
11 Ga0065716_1001584 3300005277 Bacteria 5722
12 Ga0065712_10067769 3300005290 Bacteria 45188
13 Ga0070668_100088828 3300005347 Bacteria 2433
14 Ga0070678_100007729 3300005456 Bacteria 6394
15 Ga0070665_100025360 3300005548 Bacteria 5975
16 Ga0068856_100000856 3300005614 Bacteria 32687
17 Ga0075364_10076900 3300006051 Bacteria 2203
18 Ga0075364_10096409 3300006051 Bacteria 1967
19 Ga0075367_10086484 3300006178 Bacteria 1903
20 Ga0099823_1007038 3300006944 Bacteria 11396
21 Ga0079104_1000415 3300006946 Bacteria 49119
22 Ga0079104_1001156 3300006946 Bacteria 19098
23 Ga0105251_10006992 3300009011 Bacteria 7049
24 Ga0105251_10012517 3300009011 Bacteria 4796
25 Ga0105244_10005066 3300009036 Bacteria 8858
26 Ga0105250_10002781 3300009092 Bacteria 8589
27 Ga0105250_10012276 3300009092 Bacteria 3539
28 Ga0105250_10012856 3300009092 Bacteria 3447
29 Ga0105247_10000122 3300009101 Bacteria 75505
30 Ga0105243_10000134 3300009148 Bacteria 84809
31 Ga0105243_10000713 3300009148 Bacteria 32026
32 Ga0105243_10025314 3300009148 Bacteria 4533
33 Ga0105249_10002538 3300009553 Bacteria 15801
34 Ga0105249_10168731 3300009553 Bacteria 2121
35 Ga0105239_10024495 3300010375 Bacteria 6649
36 Ga0157373_10027000 3300013100 Bacteria 4144
37 Ga0157371_10004787 3300013102 Bacteria 11664
38 Ga0157371_10008252 3300013102 Bacteria 8323
39 Ga0157370_10050980 3300013104 Bacteria 3954
40 Ga0182005_1000659 3300015265 Bacteria 16450
41 Ga0163161_10001908 3300017792 Bacteria 15228
42 Ga0163161_10002618 3300017792 Bacteria 12811
43 Ga0163161_10095704 3300017792 Bacteria 2203
44 Ga0209147_104344 3300025229 Bacteria 2393
45 Ga0209646_1000041 3300025246 Bacteria 346024
46 Ga0209130_1000716 3300025284 Bacteria 29391
47 Ga0209130_1008383 3300025284 Bacteria 3059
48 Ga0209676_1000248 3300025292 Bacteria 115456
49 Ga0209025_1000018 3300025294 Bacteria 686898
50 Ga0209025_1001433 3300025294 Bacteria 31455
51 Ga0209025_1001685 3300025294 Bacteria 27007
52 Ga0209025_1008263 3300025294 Bacteria 7521
53 Ga0209025_1015480 3300025294 Bacteria 4594
54 Ga0209025_1016129 3300025294 Bacteria 4441
55 Ga0209564_1001578 3300025295 Bacteria 22285
56 Ga0207696_1001207 3300025711 Bacteria 14700
57 Ga0207696_1003238 3300025711 Bacteria 7511
58 Ga0207696_1009779 3300025711 Bacteria 3558
59 Ga0207655_1000794 3300025728 Bacteria 34446
60 Ga0207655_1001550 3300025728 Bacteria 20754
61 Ga0207655_1002636 3300025728 Bacteria 14202
62 Ga0207655_1004872 3300025728 Bacteria 9316
63 Ga0207655_1005266 3300025728 Bacteria 8872
64 Ga0207655_1013107 3300025728 Bacteria 4783
65 Ga0207655_1016897 3300025728 Bacteria 3966
66 Ga0207713_1000913 3300025735 Bacteria 26555
67 Ga0207713_1013192 3300025735 Bacteria 4371
68 Ga0207710_10000161 3300025900 Bacteria 71238
69 Ga0207709_10000001 3300025935 Bacteria 2228154
70 Ga0207709_10000664 3300025935 Bacteria 27861
71 Ga0207709_10001363 3300025935 Bacteria 17165
72 Ga0207712_10001691 3300025961 Bacteria 14816
73 Ga0207702_10002575 3300026078 Bacteria 17053
74 Ga0207683_10022551 3300026121 Bacteria 5405
75 Ga0209281_1000213 3300027111 Bacteria 128367
76 Ga0209281_1000352 3300027111 Bacteria 75822
77 Ga0209389_1000013 3300027296 Bacteria 208890
78 Ga0209371_1000008 3300027312 Bacteria 1024606
79 Ga0209371_1000031 3300027312 Bacteria 399263
80 Ga0268266_10057362 3300028379 Bacteria 3351
81 Ga0237817_10004 3300030083 Bacteria 96242
82 Ga0268256_1000009 3300030500 Bacteria 1022625
83 Ga0268256_1000034 3300030500 Bacteria 398909
84 Ga0268256_1001041 3300030500 Bacteria 18596
85 Ga0307408_100000004 3300031548 Bacteria 572889
86 Ga0307408_100000009 3300031548 Bacteria 426576
87 Ga0307408_100000132 3300031548 Bacteria 82821
88 Ga0307408_100048111 3300031548 Bacteria 3057
89 Ga0316576_10009302 3300031727 Bacteria 6334
90 Ga0316578_10013800 3300031728 Bacteria 4295
91 Ga0307410_10000017 3300031852 Bacteria 69760
92 Ga0307406_10000506 3300031901 Bacteria 22379
93 Ga0307407_10000179 3300031903 Bacteria 19240
94 Ga0307412_10000303 3300031911 Bacteria 31315
95 Ga0307409_100000007 3300031995 Bacteria 81489
96 Ga0307409_100046654 3300031995 Bacteria 3282
97 Ga0307416_100000023 3300032002 Bacteria 186960
98 Ga0307416_100028156 3300032002 Bacteria 4175
99 Ga0307416_100095159 3300032002 Bacteria 2571
100 Ga0307414_10007937 3300032004 Bacteria 5993
101 Ga0307414_10036100 3300032004 Bacteria 3296
102 Ga0316580_10016342 3300032139 Bacteria 2277
103 Ga0316574_0010246 3300035398 Bacteria 5287
104 Ga0316582_0116558 3300036647 Bacteria 1783
105 Ga0316584_0061454 3300036712 Bacteria 2813
106 Ga0400483_002519 3300039062 Bacteria 6364
107 Ga0400483_205568 3300039062 Bacteria 10184
108 Ga0400483_281743 3300039062 Bacteria 1793
109 Ga0439436_0000087 3300041404 Bacteria 22052
110 Ga0439447_007672 3300041407 Bacteria 3399
111 Ga0439466_0001250 3300041411 Bacteria 9886
112 Ga0439465_0000026 3300041413 Bacteria 29635
113 Ga0451800_0173402 3300041459 Bacteria 5906
114 Ga0451806_427214 3300041462 Bacteria 7008
115 Ga0451807_1466182 3300041486 Bacteria 14601
116 Ga0451837_1671561 3300041494 Bacteria 1825
117 Ga0439431_0000034 3300041997 Bacteria 20591
118 Ga0439433_0000067 3300041999 Bacteria 13181
119 Ga0439433_0002499 3300041999 Bacteria 3903
120 Ga0439445_0000146 3300042004 Bacteria 12454
121 Ga0439432_000206 3300042006 Bacteria 20983
122 Ga0439449_0000276 3300042007 Bacteria 18583
123 Ga0439449_0000565 3300042007 Bacteria 13930
124 Ga0439449_0004450 3300042007 Bacteria 5406
125 Ga0439452_000641 3300042010 Bacteria 17592
126 Ga0439462_0013204 3300042015 Bacteria 2116
127 Ga0439434_0000300 3300042435 Bacteria 14185
128 Ga0466965_0039322 3300044683 Bacteria 2325
129 Ga0451576_0003258 3300045051 Bacteria 22524
130 Ga0466967_0000405 3300045976 Bacteria 20295
131 Ga0495627_000577 3300046453 Bacteria 29503
132 Ga0495627_001919 3300046453 Bacteria 10857
133 Ga0495590_0003460 3300046457 Bacteria 6441
134 Ga0495638_0000088 3300046460 Bacteria 152517
135 Ga0495638_0004697 3300046460 Bacteria 10322
136 Ga0495584_0001314 3300046491 Bacteria 15088
137 Ga0495607_0005937 3300046501 Bacteria 8658
138 Ga0495632_0000780 3300046519 Bacteria 28576
139 Ga0495632_0005339 3300046519 Bacteria 8520
140 Ga0495643_0028035 3300046522 Bacteria 3160
141 Ga0495644_0001265 3300046523 Bacteria 10377
142 Ga0495663_0001153 3300046525 Bacteria 8538
143 Ga0495663_0001555 3300046525 Bacteria 7189
144 Ga0495663_0005560 3300046525 Bacteria 3493
145 Ga0495597_0001112 3300046542 Bacteria 20357
146 Ga0495633_0003439 3300046558 Bacteria 10535
147 Ga0495668_0031913 3300046616 Bacteria 2966
148 Ga0495625_0022405 3300046660 Bacteria 4843
149 Ga0495661_0004731 3300046665 Bacteria 9782
150 Ga0495671_0000646 3300046692 Bacteria 25342
151 Ga0495649_0000060 3300046694 Bacteria 97624
152 Ga0495672_0000639 3300047320 Bacteria 38948
153 Ga0495672_0023292 3300047320 Bacteria 4009
154 Ga0495673_0050642 3300047469 Bacteria 1822
155 Ga0495681_0003890 3300047470 Bacteria 10303
156 Ga0496110_0000043 3300048913 Bacteria 61457
157 Ga0496111_0019594 3300048914 Bacteria 4704
158 Ga0496116_0005526 3300048919 Bacteria 11672
159 Ga0496118_0005716 3300048921 Bacteria 13998
160 Ga0496123_0037409 3300048926 Bacteria 3426
161 Ga0496124_0000088 3300048927 Bacteria 194644
162 Ga0496126_0009550 3300048929 Bacteria 10292
163 Ga0501343_000703 3300049132 Bacteria 2065
164 Ga0495682_0001854 3300049460 Bacteria 10598
165 Ga0501032_0000126 3300049569 Bacteria 62689
166 Ga0501033_0000258 3300049570 Bacteria 50919
167 Ga0501034_0007632 3300049571 Bacteria 11507
168 Ga0501048_0009183 3300049582 Bacteria 7433
169 Ga0501067_0024322 3300049583 Bacteria 3360
170 Ga0501070_0001179 3300049586 Bacteria 23338
171 Ga0501070_0004249 3300049586 Bacteria 12318
172 Ga0501073_0004054 3300049589 Bacteria 11008
173 Ga0501257_001489 3300049686 Bacteria 4878
174 Ga0501080_0001377 3300049742 Bacteria 20352
175 nmdc:mga00v17_36894_c1 3300050491 Bacteria 2916
176 nmdc:mga00v17_55386_c1 3300050491 Bacteria 2422

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049132 Ga0501343_000703 Ga0501343_000703_26_1261 402
2 3300039062 Ga0400483_281743 Ga0400483_281743_22_1287 405
3 3300003187 JGI25151J46595_10001560 JGI25151J46595_100015602 415
4 3300025294 Ga0209025_1000018 Ga0209025_1000018382 415
5 iso_pu_bacteria 2808606385 2808981033 416
6 iso_pu_bacteria 2808606388 2808996763 416
7 3300041459 Ga0451800_0173402 Ga0451800_0173402_3152_4774 425
8 3300041462 Ga0451806_427214 Ga0451806_427214_1359_2981 425
9 3300041486 Ga0451807_1466182 Ga0451807_1466182_9930_11552 425
10 3300013100 Ga0157373_10027000 Ga0157373_100270003 435
11 3300013102 Ga0157371_10004787 Ga0157371_100047876 435
12 3300006178 Ga0075367_10086484 Ga0075367_100864841 441
13 3300031911 Ga0307412_10000303 Ga0307412_1000030316 441
14 3300032004 Ga0307414_10007937 Ga0307414_100079373 441
15 3300003781 Ga0055536_1003482 Ga0055536_10034825 442
16 3300025292 Ga0209676_1000248 Ga0209676_100024881 442
17 3300003856 Ga0058692_1000005 Ga0058692_100000579 443
18 3300005548 Ga0070665_100025360 Ga0070665_1000253603 443
19 3300025295 Ga0209564_1001578 Ga0209564_10015785 443
20 3300027312 Ga0209371_1000031 Ga0209371_100003177 443
21 3300028379 Ga0268266_10057362 Ga0268266_100573622 443
22 3300030500 Ga0268256_1000034 Ga0268256_1000034274 443
23 3300048919 Ga0496116_0005526 Ga0496116_0005526_8414_9874 443
24 3300044683 Ga0466965_0039322 Ga0466965_0039322_725_2242 444
25 3300025935 Ga0207709_10001363 Ga0207709_1000136311 445
26 3300009148 Ga0105243_10025314 Ga0105243_100253143 446
27 3300048921 Ga0496118_0005716 Ga0496118_0005716_8112_9758 447
28 3300048926 Ga0496123_0037409 Ga0496123_0037409_1523_3007 447
29 3300048929 Ga0496126_0009550 Ga0496126_0009550_8332_9954 447
30 3300045976 Ga0466967_0000405 Ga0466967_0000405_7773_9176 448
31 3300005456 Ga0070678_100007729 Ga0070678_1000077294 454
32 3300026121 Ga0207683_10022551 Ga0207683_100225512 454
33 3300025728 Ga0207655_1013107 Ga0207655_10131072 458
34 3300025229 Ga0209147_104344 Ga0209147_1043442 459
35 3300049569 Ga0501032_0000126 Ga0501032_0000126_51214_52698 459
36 3300049570 Ga0501033_0000258 Ga0501033_0000258_33942_35426 459
37 3300009011 Ga0105251_10012517 Ga0105251_100125172 460
38 3300009092 Ga0105250_10012276 Ga0105250_100122764 460
39 iso_pu_bacteria 2831905167 2831905275 460
40 3300009092 Ga0105250_10002781 Ga0105250_100027814 461
41 3300009553 Ga0105249_10168731 Ga0105249_101687312 461
42 3300032004 Ga0307414_10036100 Ga0307414_100361003 463
43 3300003187 JGI25151J46595_10037980 JGI25151J46595_100379801 464
44 iso_pu_bacteria 2852673933 2852675858 464
45 iso_pu_bacteria 2928510474 2928511989 464
46 3300042007 Ga0439449_0004450 Ga0439449_0004450_2622_4127 465
47 3300048927 Ga0496124_0000088 Ga0496124_0000088_50728_52332 465
48 3300006946 Ga0079104_1001156 Ga0079104_100115610 466
49 3300025728 Ga0207655_1000794 Ga0207655_10007944 466
50 3300027111 Ga0209281_1000352 Ga0209281_100035254 466
51 3300030083 Ga0237817_10004 Ga0237817_1000450 466
52 3300031995 Ga0307409_100046654 Ga0307409_1000466543 466
53 3300032002 Ga0307416_100028156 Ga0307416_1000281564 466
54 3300048913 Ga0496110_0000043 Ga0496110_0000043_45453_46910 466
55 3300048914 Ga0496111_0019594 Ga0496111_0019594_2684_4141 466
56 iso_pu_bacteria 2788500588 2791213665 467
57 iso_pu_bacteria 2818991451 2819629677 467
58 3300009148 Ga0105243_10000713 Ga0105243_1000071321 468
59 3300015265 Ga0182005_1000659 Ga0182005_10006596 468
60 3300025935 Ga0207709_10000664 Ga0207709_1000066421 468
61 3300041404 Ga0439436_0000087 Ga0439436_0000087_255_1739 468
62 3300041407 Ga0439447_007672 Ga0439447_007672_861_2345 468
63 3300041413 Ga0439465_0000026 Ga0439465_0000026_6294_7778 468
64 3300041997 Ga0439431_0000034 Ga0439431_0000034_10986_12470 468
65 3300041999 Ga0439433_0000067 Ga0439433_0000067_11487_12971 468
66 3300042004 Ga0439445_0000146 Ga0439445_0000146_4712_6196 468
67 3300042006 Ga0439432_000206 Ga0439432_000206_12784_14268 468
68 3300042007 Ga0439449_0000276 Ga0439449_0000276_4474_5958 468
69 3300042010 Ga0439452_000641 Ga0439452_000641_4574_6058 468
70 3300042435 Ga0439434_0000300 Ga0439434_0000300_8888_10372 468
71 3300009553 Ga0105249_10002538 Ga0105249_100025383 469
72 3300025961 Ga0207712_10001691 Ga0207712_1000169120 469
73 3300002738 JGI25154J39366_1000212 JGI25154J39366_100021243 470
74 3300025246 Ga0209646_1000041 Ga0209646_1000041236 470
75 3300025284 Ga0209130_1008383 Ga0209130_10083831 470
76 3300025294 Ga0209025_1008263 Ga0209025_10082634 470
77 3300025294 Ga0209025_1015480 Ga0209025_10154803 470
78 iso_pu_bacteria 8057582654 8057583384 470
79 iso_pu_bacteria 2545555800 2545559001 471
80 iso_pu_bacteria 2576861599 2578933451 471
81 iso_pu_bacteria 2630968484 2631986431 471
82 iso_pu_bacteria 2671180844 2674421076 471
83 iso_pu_bacteria 2716884898 2717918125 471
84 iso_pu_bacteria 2897109615 2897109824 471
85 iso_pu_bacteria 2904560550 2904562311 471
86 iso_pu_bacteria 2969141011 2969141226 471
87 iso_pu_bacteria 2971893375 2971893587 471
88 iso_pu_bacteria 8022630665 8022634317 471
89 iso_pu_bacteria 8051952484 8051956133 471
90 iso_pu_bacteria 8052174270 8052177517 471
91 3300031548 Ga0307408_100000009 Ga0307408_100000009280 472
92 3300032002 Ga0307416_100000023 Ga0307416_10000002354 472
93 iso_pu_bacteria 2643221729 2644708322 472
94 iso_pu_bacteria 2643221730 2644714920 472
95 iso_pu_bacteria 2684622632 2685148572 472
96 iso_pu_bacteria 2695420987 2698324603 472
97 iso_pu_bacteria 2703719227 2705992504 472
98 iso_pu_bacteria 2718218445 2721503953 472
99 iso_pu_bacteria 2738541358 2739158272 472
100 iso_pu_bacteria 2738543006 2739211317 472
101 iso_pu_bacteria 2818991443 2819583374 472
102 iso_pu_bacteria 2929233124 2929233821 472
103 iso_pu_bacteria 2938917290 2938917990 472
104 iso_pu_bacteria 2965761152 2965761883 472
105 iso_pu_bacteria 2979083700 2979084310 472
106 iso_pu_bacteria 8022621104 8022621757 472
107 iso_pu_bacteria 8023438354 8023438847 472
108 iso_pu_bacteria 8023444577 8023450439 472
109 3300005614 Ga0068856_100000856 Ga0068856_10000085613 473
110 3300013102 Ga0157371_10008252 Ga0157371_100082524 473
111 3300025711 Ga0207696_1003238 Ga0207696_10032386 473
112 3300025728 Ga0207655_1004872 Ga0207655_10048722 473
113 3300026078 Ga0207702_10002575 Ga0207702_100025753 473
114 3300030500 Ga0268256_1001041 Ga0268256_100104110 473
115 3300031852 Ga0307410_10000017 Ga0307410_1000001733 473
116 3300031903 Ga0307407_10000179 Ga0307407_100001791 473
117 3300031995 Ga0307409_100000007 Ga0307409_10000000717 473
118 3300046616 Ga0495668_0031913 Ga0495668_0031913_1099_2583 473
119 3300003187 JGI25151J46595_10006233 JGI25151J46595_100062332 474
120 3300025294 Ga0209025_1001433 Ga0209025_10014336 474
121 3300041494 Ga0451837_1671561 Ga0451837_1671561_227_1705 474
122 iso_pu_bacteria 2511231119 2511698069 474
123 iso_pu_bacteria 2808606364 2808868659 474
124 iso_pu_bacteria 2818991441 2819569807 474
125 iso_pu_bacteria 2864733723 2864738440 474
126 iso_pu_bacteria 2904113452 2904115197 474
127 iso_pu_bacteria 8022792930 8022796133 474
128 iso_pu_bacteria 8048746797 8048750125 474
129 iso_pu_bacteria 8057632132 8057633317 474
130 3300017792 Ga0163161_10095704 Ga0163161_100957042 475
131 iso_pu_bacteria 2547132130 2547501818 475
132 iso_pu_bacteria 2747842428 2747948443 475
133 iso_pu_bacteria 2857604169 2857605986 475
134 3300006944 Ga0099823_1007038 Ga0099823_100703812 476
135 3300009092 Ga0105250_10012856 Ga0105250_100128564 476
136 3300025284 Ga0209130_1000716 Ga0209130_100071626 476
137 3300025294 Ga0209025_1001685 Ga0209025_10016854 476
138 3300025294 Ga0209025_1016129 Ga0209025_10161293 476
139 3300025711 Ga0207696_1001207 Ga0207696_100120711 476
140 3300025735 Ga0207713_1013192 Ga0207713_10131924 476
141 3300027296 Ga0209389_1000013 Ga0209389_100001311 476
142 3300031548 Ga0307408_100000004 Ga0307408_100000004475 476
143 iso_pu_bacteria 2874220319 2874223878 476
144 iso_pu_bacteria 2919534386 2919536396 476
145 iso_pu_bacteria 2919726948 2919730543 476
146 iso_pu_bacteria 2923634449 2923634456 476
147 3300006946 Ga0079104_1000415 Ga0079104_100041529 477
148 3300027111 Ga0209281_1000213 Ga0209281_1000213123 477
149 3300046457 Ga0495590_0003460 Ga0495590_0003460_3389_4876 477
150 3300046460 Ga0495638_0000088 Ga0495638_0000088_14461_15948 477
151 3300046491 Ga0495584_0001314 Ga0495584_0001314_11782_13269 477
152 3300046519 Ga0495632_0000780 Ga0495632_0000780_18096_19583 477
153 3300046523 Ga0495644_0001265 Ga0495644_0001265_4935_6422 477
154 3300046542 Ga0495597_0001112 Ga0495597_0001112_14649_16136 477
155 3300046692 Ga0495671_0000646 Ga0495671_0000646_19900_21387 477
156 3300046694 Ga0495649_0000060 Ga0495649_0000060_94316_95803 477
157 3300047320 Ga0495672_0000639 Ga0495672_0000639_22872_24359 477
158 3300047320 Ga0495672_0023292 Ga0495672_0023292_2087_3550 477
159 iso_pu_bacteria 2690315857 2691329708 477
160 iso_pu_bacteria 8016254467 8016256719 477
161 3300005290 Ga0065712_10067769 Ga0065712_1006776912 478
162 3300025711 Ga0207696_1009779 Ga0207696_10097793 478
163 3300031548 Ga0307408_100000132 Ga0307408_1000001326 478
164 3300031548 Ga0307408_100048111 Ga0307408_1000481112 478
165 3300031901 Ga0307406_10000506 Ga0307406_1000050617 478
166 3300032002 Ga0307416_100095159 Ga0307416_1000951592 478
167 3300041999 Ga0439433_0002499 Ga0439433_0002499_288_1739 478
168 3300042007 Ga0439449_0000565 Ga0439449_0000565_1512_2963 478
169 3300042015 Ga0439462_0013204 Ga0439462_0013204_175_1626 478
170 iso_pu_bacteria 2595698237 2596374456 478
171 iso_pu_bacteria 2595698237 2596375320 478
172 iso_pu_bacteria 2595698237 2596376392 478
173 iso_pu_bacteria 2643221552 2643782581 478
174 iso_pu_bacteria 2643221665 2644362273 478
175 iso_pu_bacteria 2643221736 2644747987 478
176 iso_pu_bacteria 2739367654 2739606185 478
177 iso_pu_bacteria 2747842429 2747952545 478
178 iso_pu_bacteria 2773857758 2774380955 478
179 iso_pu_bacteria 2842698319 2842699269 478
180 iso_pu_bacteria 2857542790 2857546282 478
181 iso_pu_bacteria 2861691609 2861695752 478
182 iso_pu_bacteria 2904509784 2904511165 478
183 iso_pu_bacteria 2908678064 2908680089 478
184 iso_pu_bacteria 2919134579 2919138354 478
185 iso_pu_bacteria 2919446982 2919450106 478
186 iso_pu_bacteria 2974294766 2974296517 478
187 iso_pu_bacteria 2974324384 2974327246 478
188 iso_pu_bacteria 2977264416 2977267580 478
189 iso_pu_bacteria 3003665799 3003668706 478
190 iso_pu_bacteria 3003665799 3003671685 478
191 iso_pu_bacteria 8004212874 8004215006 478
192 3300003323 rootH1_10233067 rootH1_102330672 479
193 iso_pu_bacteria 2508501050 2508735520 479
194 iso_pu_bacteria 2775506901 2776266164 479
195 iso_pu_bacteria 2874123672 2874130015 479
196 iso_pu_bacteria 2895511927 2895518768 479
197 iso_pu_bacteria 8054563764 8054564501 479
198 3300039062 Ga0400483_002519 Ga0400483_002519_748_2268 480
199 3300039062 Ga0400483_205568 Ga0400483_205568_953_2473 480
200 3300046453 Ga0495627_000577 Ga0495627_000577_2919_4403 480
201 3300046660 Ga0495625_0022405 Ga0495625_0022405_958_2442 480
202 3300047469 Ga0495673_0050642 Ga0495673_0050642_156_1640 480
203 3300049571 Ga0501034_0007632 Ga0501034_0007632_440_1921 480
204 3300049583 Ga0501067_0024322 Ga0501067_0024322_1286_2767 480
205 3300049586 Ga0501070_0001179 Ga0501070_0001179_512_1993 480
206 3300049586 Ga0501070_0004249 Ga0501070_0004249_7100_8581 480
207 3300049589 Ga0501073_0004054 Ga0501073_0004054_3382_4863 480
208 3300049742 Ga0501080_0001377 Ga0501080_0001377_4036_5517 480
209 iso_pu_bacteria 2599185155 2599329062 480
210 iso_pu_bacteria 2639762793 2640734596 480
211 iso_pu_bacteria 2643221665 2644361712 480
212 iso_pu_bacteria 2675903507 2678231497 480
213 iso_pu_bacteria 2744054655 2745159705 480
214 iso_pu_bacteria 2773857761 2774389244 480
215 iso_pu_bacteria 2773857770 2774437056 480
216 iso_pu_bacteria 2842815866 2842818551 480
217 iso_pu_bacteria 2852612431 2852617729 480
218 iso_pu_bacteria 2852667396 2852672907 480
219 iso_pu_bacteria 2861520306 2861524515 480
220 iso_pu_bacteria 2916699645 2916701941 480
221 iso_pu_bacteria 2919182534 2919182724 480
222 iso_pu_bacteria 2928515477 2928517841 480
223 iso_pu_bacteria 2952252522 2952255585 480
224 iso_pu_bacteria 2984568884 2984569066 480
225 iso_pu_bacteria 2990196909 2990200324 480
226 iso_pu_bacteria 2995392953 2995396842 480
227 iso_pu_bacteria 8033232454 8033232927 480
228 iso_pu_bacteria 8057160832 8057162746 480
229 3300005347 Ga0070668_100088828 Ga0070668_1000888281 481
230 3300006051 Ga0075364_10076900 Ga0075364_100769002 481
231 3300006051 Ga0075364_10096409 Ga0075364_100964092 481
232 3300010375 Ga0105239_10024495 Ga0105239_100244954 481
233 3300031727 Ga0316576_10009302 Ga0316576_100093024 481
234 3300031728 Ga0316578_10013800 Ga0316578_100138003 481
235 3300032139 Ga0316580_10016342 Ga0316580_100163421 481
236 3300035398 Ga0316574_0010246 Ga0316574_0010246_325_1830 481
237 3300036647 Ga0316582_0116558 Ga0316582_0116558_14_1519 481
238 3300036712 Ga0316584_0061454 Ga0316584_0061454_870_2375 481
239 3300045051 Ga0451576_0003258 Ga0451576_0003258_5093_6574 481
240 3300049582 Ga0501048_0009183 Ga0501048_0009183_1459_2940 481
241 3300049686 Ga0501257_001489 Ga0501257_001489_2254_3735 481
242 3300050491 nmdc:mga00v17_36894_c1 nmdc:mga00v17_36894_c1_971_2449 481
243 3300050491 nmdc:mga00v17_55386_c1 nmdc:mga00v17_55386_c1_165_1772 481
244 iso_pu_bacteria 2595698237 2596377179 481
245 iso_pu_bacteria 2808606387 2808989861 481
246 iso_pu_bacteria 2852684882 2852689427 481
247 iso_pu_bacteria 2891048133 2891048871 481
248 iso_pu_bacteria 8021622325 8021624160 481
249 iso_pu_bacteria 8021626552 8021629577 481
250 iso_pu_bacteria 8021648035 8021649428 481
251 iso_pu_bacteria 8045864390 8045864719 481
252 3300025728 Ga0207655_1005266 Ga0207655_10052662 482
253 iso_pu_bacteria 2919513703 2919514425 482
254 iso_pu_bacteria 2919675420 2919677625 482
255 2209111006 2214572718 2213616007 484
256 3300003856 Ga0058692_1000001 Ga0058692_100000177 484
257 3300005272 Ga0065703_1000089 Ga0065703_100008921 484
258 3300005277 Ga0065716_1001584 Ga0065716_10015844 484
259 3300009011 Ga0105251_10006992 Ga0105251_100069925 484
260 3300009036 Ga0105244_10005066 Ga0105244_100050666 484
261 3300009101 Ga0105247_10000122 Ga0105247_1000012272 484
262 3300009148 Ga0105243_10000134 Ga0105243_1000013447 484
263 3300013104 Ga0157370_10050980 Ga0157370_100509801 484
264 3300017792 Ga0163161_10001908 Ga0163161_100019085 484
265 3300017792 Ga0163161_10002618 Ga0163161_100026183 484
266 3300025728 Ga0207655_1001550 Ga0207655_100155013 484
267 3300025728 Ga0207655_1002636 Ga0207655_100263610 484
268 3300025728 Ga0207655_1016897 Ga0207655_10168972 484
269 3300025735 Ga0207713_1000913 Ga0207713_10009131 484
270 3300025900 Ga0207710_10000161 Ga0207710_100001613 484
271 3300025935 Ga0207709_10000001 Ga0207709_10000001734 484
272 3300027312 Ga0209371_1000008 Ga0209371_1000008213 484
273 3300030500 Ga0268256_1000009 Ga0268256_1000009213 484
274 3300041411 Ga0439466_0001250 Ga0439466_0001250_7420_8874 484
275 3300046453 Ga0495627_001919 Ga0495627_001919_1204_2658 484
276 3300046460 Ga0495638_0004697 Ga0495638_0004697_8258_9712 484
277 3300046501 Ga0495607_0005937 Ga0495607_0005937_6978_8432 484
278 3300046519 Ga0495632_0005339 Ga0495632_0005339_6792_8246 484
279 3300046522 Ga0495643_0028035 Ga0495643_0028035_1548_3002 484
280 3300046525 Ga0495663_0001153 Ga0495663_0001153_5249_6703 484
281 3300046525 Ga0495663_0001555 Ga0495663_0001555_546_2000 484
282 3300046525 Ga0495663_0005560 Ga0495663_0005560_891_2345 484
283 3300046558 Ga0495633_0003439 Ga0495633_0003439_8297_9751 484
284 3300046665 Ga0495661_0004731 Ga0495661_0004731_7771_9225 484
285 3300047470 Ga0495681_0003890 Ga0495681_0003890_514_1968 484
286 3300049460 Ga0495682_0001854 Ga0495682_0001854_8566_10020 484
287 iso_pu_bacteria 2738541271 2738692017 484
288 iso_pu_bacteria 2738543016 2739267676 484
289 iso_pu_bacteria 2806310737 2807410997 484
290 iso_pu_bacteria 2860339153 2860339360 484

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01740

STAS

STAS domain

446

541

0.93

PF00916

Sulfate_transp

Sulfate permease family

20

409

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
5iof-assembly1.cif.gz_A structure of the transmembrane domain of the transporter slc26dg 0.9684 8 385
5iof-assembly1.cif.gz_A structure of the transmembrane domain of the transporter slc26dg 0.9583 8 385
3oiz-assembly1.cif.gz_A crystal structure of antisigma-factor antagonist, stas domain from rhodobacter sphaeroides 0.9521 387 466
3lkl-assembly3.cif.gz_B crystal structure of the c-terminal domain of anti-sigma factor antagonist stas from rhodobacter sphaeroides 0.8933 390 477
3lkl-assembly2.cif.gz_A crystal structure of the c-terminal domain of anti-sigma factor antagonist stas from rhodobacter sphaeroides 0.8882 388 477
ID Description Score Start End Superfamily
af_Q8IKC7_510_604_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.9387 390 477 3.30.750.24
3lklB00 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8854 390 477 3.30.750.24
af_I1KV89_512_657_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8735 395 483 3.30.750.24
af_Q8IKC7_510_604_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8638 390 477 3.30.750.24
af_A0A1D6Q0R8_688_836_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8553 396 483 3.30.750.24
ID Description Score Start End GO Terms
AF-A0A353R097-F1-model_v4 SulP family inorganic anion transporter 0.9943 1 282 GO:0008271
GO:0016020
AF-A0A098Y440-F1-model_v4 Sulfate permease 0.9894 25 385 GO:0008271
GO:0016020
AF-K5ZEF0-F1-model_v4 Sulfate transporter/antisigma-factor antagonist, major facilitator superfamily protein 0.9877 77 316 GO:0016020
AF-A0A7U6QQR3-F1-model_v4 SLC26A/SulP transporter domain-containing protein 0.9875 2 300 GO:0008271
GO:0016020
AF-A0A259DKD3-F1-model_v4 Sodium-independent anion transporter 0.9818 5 226 GO:0016020

Feature Viewer

pLDDT pTM Quality
89.37 0.83 High
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Predicted Structure (AlphaFold2)

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