F390691

General Info

Members Datasets Scaffolds Average Seq Length
292 185 584 391

Family's Representative Sequence

Representative Sequence 3300003322|rootL2_10004502|rootL2_100045028
Length 457
Sequence MGIDADFPLEVIIGGRVIAPLRRDRMCDGRAATRFARVHIRRLGRVLFKEERMHVESPLSKHFNEFTTSGKTAGIILILCTVVSLAIANSAAGAAYIHFWHAQVAGLSLEQWVNDGLMAVFFLLIGLELERELYNGELSDPKNALLPILAAAGGIVVPATVHYALNGGDPTQAGFGIPMATDIAFALGVLALLGRNVPASLKVFLTALAVMDDLGAIIVIALVYTKQLSIAYLAGALAVFAALVALNRIARVMALAPYLLGGALMWFFMLKSGVHATIAGVLLAFAIPYSARRDDEATPSHRLEYVLHKPVTFLVLPIFALANTGITVASGWAEQLFSANSMGIILGLAVGKPVGIFTISFIAVALGLCRLPPDLAWRHVFGGGLLGGIGFTMSIFITNLAFGGQAATVDASKLAILVASLASGVLGYVWLKLRGALTATDKDPATVDYARSDAPRV

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003544 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
6 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
61 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
62 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
85 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
88 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
89 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
90 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
91 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
92 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
93 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
94 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
95 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
99 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
100 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
101 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
102 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
103 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
104 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
105 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
106 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
107 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
108 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
109 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
110 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
111 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
112 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
113 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
114 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
115 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
116 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
117 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
118 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
119 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
120 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
121 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
122 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
123 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
124 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
125 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
126 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
127 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
128 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
129 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
130 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
131 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
132 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
133 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
134 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
135 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
136 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
137 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
138 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
139 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
140 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
141 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
142 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
143 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
144 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
145 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
146 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
147 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
148 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
149 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
150 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
151 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
152 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
153 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
154 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
155 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
156 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
157 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
158 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
159 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
160 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
161 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
162 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
163 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
164 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
165 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
166 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
167 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
168 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
169 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
170 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
171 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
172 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
173 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
176 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
177 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
178 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
179 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
180 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
181 2841760612 Bosea sp. Tri-49 Isolate Nodule
182 2844104063 Bosea sp. Tri-39 Isolate Nodule
183 2851246043 Bosea sp. Tri-54 Isolate Nodule
184 2904424332 Duganella sp. 1411 Isolate Rhizosphere
185 2919476304 Duganella sp. 3397 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.95
Metatranscriptomes 0.34
Isolates 1.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.68
Nodule 1.71
Rhizoplane 3.42
Rhizosphere 87.33
Stem 0
Stem Tuber 0
Unclassified 2.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10004502 3300003322 Bacteria 41145
2 rootH1_10001909 3300003316 Bacteria 15795
3 rootH2_10006948 3300003320 Bacteria 57399
4 rootL2_10002019 3300003322 Bacteria 27409
5 rootL2_10069870 3300003322 Bacteria 3180
6 rootL2_10219027 3300003322 Bacteria 4927
7 rootL2_10345124 3300003322 Bacteria 1537
8 rootH1_10009096 3300003323 Bacteria 43299
9 rootH1_10108059 3300003323 Bacteria 11430
10 Ga0007417J51691_1040485 3300003544 Bacteria 2111
11 Ga0055524_1000003 3300003775 Bacteria 399748
12 Ga0065707_10082421 3300005295 Bacteria 15391
13 Ga0070676_10074810 3300005328 Bacteria 2041
14 Ga0070690_100000072 3300005330 Bacteria 48578
15 Ga0070690_100083099 3300005330 Bacteria 2098
16 Ga0070677_10006518 3300005333 Bacteria 3880
17 Ga0070682_100056204 3300005337 Bacteria 2474
18 Ga0070682_100080760 3300005337 Unclassified 2103
19 Ga0070689_100000039 3300005340 Bacteria 81597
20 Ga0070689_100104590 3300005340 Bacteria 2245
21 Ga0070687_100005857 3300005343 Bacteria 5000
22 Ga0070668_100108318 3300005347 Bacteria 2210
23 Ga0070669_100201280 3300005353 Bacteria 1567
24 Ga0070674_100154587 3300005356 Bacteria 1734
25 Ga0070673_100014922 3300005364 Bacteria 5436
26 Ga0070688_100000087 3300005365 Bacteria 46867
27 Ga0070688_100062483 3300005365 Bacteria 2358
28 Ga0070701_10000043 3300005438 Bacteria 32096
29 Ga0070700_100003551 3300005441 Bacteria 8053
30 Ga0070700_100011500 3300005441 Bacteria 4905
31 Ga0070694_100032019 3300005444 Bacteria 3451
32 Ga0068867_100005207 3300005459 Bacteria 9177
33 Ga0068867_100069211 3300005459 Bacteria 2636
34 Ga0068867_100273337 3300005459 Bacteria 1383
35 Ga0070685_10000211 3300005466 Bacteria 38855
36 Ga0070679_100053747 3300005530 Bacteria 4009
37 Ga0070672_100062027 3300005543 Bacteria 2949
38 Ga0070686_100000802 3300005544 Bacteria 18174
39 Ga0070686_100004912 3300005544 Bacteria 7369
40 Ga0070686_100086707 3300005544 Bacteria 2085
41 Ga0070696_100181221 3300005546 Bacteria 1563
42 Ga0070693_100014745 3300005547 Bacteria 4012
43 Ga0070704_100081040 3300005549 Bacteria 2389
44 Ga0068855_100174650 3300005563 Unclassified 2432
45 Ga0068852_100014726 3300005616 Bacteria 6034
46 Ga0068859_100000257 3300005617 Bacteria 52795
47 Ga0068859_100053058 3300005617 Bacteria 4077
48 Ga0068859_100246549 3300005617 Bacteria 1876
49 Ga0068866_10118827 3300005718 Bacteria 1486
50 Ga0068861_100002299 3300005719 Bacteria 12415
51 Ga0068861_100104028 3300005719 Bacteria 2264
52 Ga0068870_10103300 3300005840 Bacteria 1615
53 Ga0068860_100055219 3300005843 Bacteria 3775
54 Ga0068862_100083294 3300005844 Bacteria 2777
55 Ga0068862_100245024 3300005844 Bacteria 1631
56 Ga0081455_10016659 3300005937 Bacteria 7081
57 Ga0081538_10038544 3300005981 Bacteria 3081
58 Ga0068871_100186609 3300006358 Bacteria 1784
59 Ga0068865_100007295 3300006881 Bacteria 6792
60 Ga0068865_100037182 3300006881 Bacteria 3286
61 Ga0097620_100000257 3300006931 Bacteria 52795
62 Ga0097620_100053059 3300006931 Bacteria 4077
63 Ga0097620_100246560 3300006931 Bacteria 1876
64 Ga0099826_10000002 3300006948 Bacteria 1125830
65 Ga0111539_10161336 3300009094 Bacteria 2622
66 Ga0105243_10192793 3300009148 Bacteria 1781
67 Ga0105248_10000428 3300009177 Bacteria 47662
68 Ga0105248_10036822 3300009177 Bacteria 5472
69 Ga0105249_10035641 3300009553 Bacteria 4512
70 Ga0157373_10139177 3300013100 Bacteria 1707
71 Ga0157371_10000001 3300013102 Bacteria 1162285
72 Ga0157371_10000131 3300013102 Bacteria 113432
73 Ga0157371_10017349 3300013102 Bacteria 5351
74 Ga0157371_10022153 3300013102 Bacteria 4660
75 Ga0157371_10066893 3300013102 Unclassified 2544
76 Ga0157370_10190095 3300013104 Bacteria 1906
77 Ga0157374_10137378 3300013296 Bacteria 2371
78 Ga0157374_10266777 3300013296 Bacteria 1688
79 Ga0157378_10016745 3300013297 Bacteria 6423
80 Ga0157378_10135422 3300013297 Bacteria 2284
81 Ga0163162_10008300 3300013306 Bacteria 10132
82 Ga0163162_10427137 3300013306 Bacteria 1457
83 Ga0157372_10016391 3300013307 Bacteria 7949
84 Ga0157372_10120449 3300013307 Bacteria 3013
85 Ga0157375_10229922 3300013308 Bacteria 2013
86 Ga0163163_10000054 3300014325 Bacteria 126041
87 Ga0157380_10000642 3300014326 Bacteria 21587
88 Ga0157380_10009679 3300014326 Bacteria 6912
89 Ga0157380_10061859 3300014326 Bacteria 2997
90 Ga0157379_10177384 3300014968 Bacteria 1924
91 Ga0157376_10087964 3300014969 Bacteria 2682
92 Ga0182006_1014026 3300015261 Bacteria 3461
93 Ga0163161_10148665 3300017792 Bacteria 1779
94 Ga0209256_1000007 3300025299 Bacteria 1136599
95 Ga0207682_10029757 3300025893 Bacteria 2185
96 Ga0207645_10049418 3300025907 Bacteria 2685
97 Ga0207643_10020283 3300025908 Bacteria 3647
98 Ga0207662_10033733 3300025918 Bacteria 2985
99 Ga0207652_10001726 3300025921 Bacteria 19069
100 Ga0207681_10112950 3300025923 Bacteria 1980
101 Ga0207681_10142760 3300025923 Bacteria 1785
102 Ga0207670_10000035 3300025936 Bacteria 107909
103 Ga0207669_10128868 3300025937 Bacteria 1734
104 Ga0207691_10029464 3300025940 Bacteria 5135
105 Ga0207711_10003450 3300025941 Bacteria 13680
106 Ga0207711_10057727 3300025941 Bacteria 3337
107 Ga0207689_10003184 3300025942 Bacteria 15054
108 Ga0207689_10099883 3300025942 Bacteria 2384
109 Ga0207651_10128571 3300025960 Bacteria 1935
110 Ga0207651_10291051 3300025960 Bacteria 1354
111 Ga0207678_10156052 3300026067 Bacteria 1949
112 Ga0207708_10006837 3300026075 Bacteria 8437
113 Ga0207708_10049491 3300026075 Bacteria 3200
114 Ga0207648_10052020 3300026089 Bacteria 3581
115 Ga0207648_10227143 3300026089 Bacteria 1660
116 Ga0207675_100095135 3300026118 Bacteria 2802
117 Ga0207683_10016355 3300026121 Bacteria 6315
118 Ga0207698_10021836 3300026142 Bacteria 4434
119 Ga0209282_1000001 3300027666 Bacteria 2450367
120 Ga0268265_10100955 3300028380 Bacteria 2330
121 Ga0268264_10118492 3300028381 Unclassified 2330
122 Ga0265328_10008743 3300031239 Bacteria 4158
123 Ga0265325_10032171 3300031241 Bacteria 2802
124 Ga0265340_10053790 3300031247 Bacteria 1943
125 Ga0265339_10002699 3300031249 Bacteria 12623
126 Ga0265316_10015588 3300031344 Bacteria 6636
127 Ga0307513_10004439 3300031456 Bacteria 18733
128 Ga0307513_10029258 3300031456 Bacteria 6284
129 Ga0307509_10069258 3300031507 Bacteria 3689
130 Ga0307408_100245750 3300031548 Unclassified 1473
131 Ga0265313_10002977 3300031595 Bacteria 14120
132 Ga0265313_10037688 3300031595 Bacteria 2414
133 Ga0265342_10023156 3300031712 Bacteria 3935
134 Ga0307406_10120223 3300031901 Bacteria 1825
135 Ga0307407_10080888 3300031903 Bacteria 1965
136 Ga0307416_100000927 3300032002 Bacteria 15505
137 Ga0307415_100061117 3300032126 Unclassified 2607
138 Ga0307415_100158339 3300032126 Bacteria 1752
139 Ga0395901_0010667 3300038443 Bacteria 9313
140 Ga0439438_000018 3300041405 Bacteria 123959
141 Ga0439447_008035 3300041407 Bacteria 3296
142 Ga0439447_017762 3300041407 Bacteria 1933
143 Ga0439466_0005692 3300041411 Bacteria 4750
144 Ga0439465_0000273 3300041413 Bacteria 14446
145 Ga0451843_0299923 3300041509 Bacteria 1912
146 Ga0439431_0000253 3300041997 Bacteria 10906
147 Ga0439433_0001135 3300041999 Bacteria 5445
148 Ga0439442_002275 3300042002 Bacteria 3771
149 Ga0439445_0000495 3300042004 Bacteria 7996
150 Ga0439432_000809 3300042006 Bacteria 11676
151 Ga0439432_000850 3300042006 Bacteria 11444
152 Ga0439449_0000784 3300042007 Bacteria 12253
153 Ga0439452_000799 3300042010 Bacteria 14880
154 Ga0439434_0000456 3300042435 Bacteria 11592
155 Ga0451577_0235485 3300042876 Bacteria 1656
156 Ga0466972_0000130 3300044658 Bacteria 63070
157 Ga0453683_0000155 3300044673 Bacteria 100950
158 Ga0453684_0005308 3300044712 Bacteria 25691
159 Ga0453684_0038461 3300044712 Bacteria 6540
160 Ga0453684_0066827 3300044712 Bacteria 4576
161 Ga0453684_0107177 3300044712 Bacteria 3403
162 Ga0453684_0380764 3300044712 Bacteria 1584
163 Ga0451576_0000363 3300045051 Bacteria 108839
164 Ga0451576_0001097 3300045051 Bacteria 49425
165 Ga0451576_0003940 3300045051 Bacteria 19807
166 Ga0451576_0007074 3300045051 Bacteria 13553
167 Ga0451576_0031252 3300045051 Bacteria 5680
168 Ga0495629_0017373 3300046459 Bacteria 5155
169 Ga0495638_0000808 3300046460 Bacteria 33041
170 Ga0495638_0026297 3300046460 Bacteria 3773
171 Ga0495582_0007069 3300046473 Bacteria 6237
172 Ga0495605_0011697 3300046474 Bacteria 4884
173 Ga0495605_0016448 3300046474 Bacteria 4004
174 Ga0495584_0000236 3300046491 Bacteria 39815
175 Ga0495584_0015163 3300046491 Bacteria 3925
176 Ga0495584_0025989 3300046491 Bacteria 2967
177 Ga0495585_0000060 3300046492 Bacteria 110761
178 Ga0495585_0000843 3300046492 Bacteria 26368
179 Ga0495585_0004503 3300046492 Bacteria 9031
180 Ga0495585_0004607 3300046492 Bacteria 8909
181 Ga0495585_0024312 3300046492 Bacteria 3474
182 Ga0495585_0070425 3300046492 Bacteria 1907
183 Ga0495594_0009248 3300046499 Bacteria 5086
184 Ga0495594_0016272 3300046499 Bacteria 3917
185 Ga0495596_0000440 3300046500 Bacteria 26609
186 Ga0495596_0002923 3300046500 Bacteria 8877
187 Ga0495596_0014942 3300046500 Bacteria 3262
188 Ga0495607_0011510 3300046501 Bacteria 5886
189 Ga0495607_0016902 3300046501 Bacteria 4697
190 Ga0495583_0000266 3300046506 Bacteria 85810
191 Ga0495583_0009790 3300046506 Bacteria 5686
192 Ga0495583_0019501 3300046506 Bacteria 3538
193 Ga0495606_0074209 3300046507 Bacteria 2131
194 Ga0495610_0010399 3300046512 Bacteria 5785
195 Ga0495610_0015077 3300046512 Bacteria 4508
196 Ga0495616_0018358 3300046513 Bacteria 3841
197 Ga0495616_0049482 3300046513 Bacteria 2106
198 Ga0495620_0004271 3300046515 Bacteria 8083
199 Ga0495631_0000888 3300046518 Bacteria 18695
200 Ga0495631_0004228 3300046518 Bacteria 7678
201 Ga0495631_0030863 3300046518 Bacteria 2429
202 Ga0495632_0024870 3300046519 Bacteria 3175
203 Ga0495637_0024931 3300046520 Bacteria 2702
204 Ga0495643_0004201 3300046522 Bacteria 10199
205 Ga0495644_0020470 3300046523 Bacteria 2525
206 Ga0495644_0029636 3300046523 Bacteria 2067
207 Ga0495648_0002372 3300046524 Bacteria 17491
208 Ga0495648_0006714 3300046524 Bacteria 9311
209 Ga0495642_0001111 3300046528 Bacteria 12407
210 Ga0495642_0023125 3300046528 Bacteria 2452
211 Ga0495609_0000298 3300046538 Bacteria 45867
212 Ga0495609_0014862 3300046538 Bacteria 3653
213 Ga0495609_0023079 3300046538 Bacteria 2860
214 Ga0495622_0036143 3300046557 Bacteria 2303
215 Ga0495633_0000047 3300046558 Bacteria 165890
216 Ga0495633_0005855 3300046558 Bacteria 7399
217 Ga0495633_0016143 3300046558 Bacteria 3858
218 Ga0495633_0102246 3300046558 Bacteria 1330
219 Ga0495668_0007790 3300046616 Bacteria 6790
220 Ga0495668_0009163 3300046616 Bacteria 6099
221 Ga0495668_0022360 3300046616 Bacteria 3615
222 Ga0495668_0063346 3300046616 Bacteria 2037
223 Ga0495668_0101929 3300046616 Bacteria 1570
224 Ga0495611_0010940 3300046648 Bacteria 3843
225 Ga0495611_0012188 3300046648 Bacteria 3654
226 Ga0495611_0041653 3300046648 Bacteria 2048
227 Ga0495625_0001796 3300046660 Bacteria 24659
228 Ga0495625_0011865 3300046660 Bacteria 7075
229 Ga0495625_0014437 3300046660 Bacteria 6304
230 Ga0495625_0194362 3300046660 Bacteria 1342
231 Ga0495661_0000049 3300046665 Bacteria 144060
232 Ga0495661_0000273 3300046665 Bacteria 59215
233 Ga0495661_0014708 3300046665 Bacteria 5239
234 Ga0495661_0033844 3300046665 Bacteria 3220
235 Ga0495661_0049531 3300046665 Bacteria 2547
236 Ga0495661_0055425 3300046665 Bacteria 2376
237 Ga0495670_0003345 3300046691 Bacteria 7895
238 Ga0495670_0006988 3300046691 Bacteria 5563
239 Ga0495670_0009719 3300046691 Bacteria 4727
240 Ga0495670_0030857 3300046691 Bacteria 2663
241 Ga0495649_0003178 3300046694 Bacteria 11228
242 Ga0495649_0012564 3300046694 Bacteria 4918
243 Ga0495589_0000424 3300046794 Bacteria 31342
244 Ga0495636_0017495 3300047318 Bacteria 2870
245 Ga0495672_0000188 3300047320 Bacteria 89538
246 Ga0495683_0000005 3300047323 Bacteria 287871
247 Ga0495683_0008376 3300047323 Bacteria 5539
248 Ga0495683_0011455 3300047323 Bacteria 4667
249 Ga0495677_0000442 3300047445 Bacteria 17731
250 Ga0495677_0000999 3300047445 Bacteria 11389
251 Ga0495679_003384 3300047446 Bacteria 7687
252 Ga0495681_0007875 3300047470 Bacteria 6737
253 Ga0495681_0023180 3300047470 Bacteria 3303
254 Ga0495681_0052142 3300047470 Bacteria 1921
255 Ga0495686_0000109 3300047472 Bacteria 171482
256 Ga0495686_0029194 3300047472 Bacteria 3589
257 Ga0495686_0068037 3300047472 Bacteria 2197
258 Ga0495614_0006256 3300048089 Bacteria 5349
259 Ga0495626_0013320 3300048091 Bacteria 4273
260 Ga0495626_0032748 3300048091 Bacteria 2493
261 Ga0496102_0010784 3300048905 Bacteria 7870
262 Ga0496103_0002284 3300048906 Bacteria 12113
263 Ga0496105_0071670 3300048908 Bacteria 2863
264 Ga0496109_0050509 3300048912 Bacteria 3787
265 Ga0496110_0001143 3300048913 Bacteria 18767
266 Ga0496110_0011207 3300048913 Bacteria 7327
267 Ga0496111_0018844 3300048914 Bacteria 4785
268 Ga0496111_0096648 3300048914 Bacteria 2168
269 Ga0496112_0347416 3300048915 Bacteria 1426
270 Ga0496113_0003153 3300048916 Bacteria 9814
271 Ga0496121_0106758 3300048924 Bacteria 2146
272 Ga0496122_0000552 3300048925 Bacteria 77275
273 Ga0496123_0001031 3300048926 Bacteria 42310
274 Ga0496124_0121375 3300048927 Bacteria 2087
275 Ga0496125_0002211 3300048928 Bacteria 25955
276 Ga0496126_0001167 3300048929 Bacteria 43260
277 Ga0495678_000443 3300049459 Bacteria 41243
278 Ga0501300_002329 3300049523 Unclassified 2835
279 Ga0501034_0021655 3300049571 Bacteria 6548
280 Ga0501038_0057317 3300049574 Bacteria 3345
281 Ga0501202_003436 3300049652 Bacteria 2712
282 Ga0501235_042134 3300049669 Unclassified 1046
283 Ga0501257_000585 3300049686 Bacteria 7218
284 Ga0501080_0221684 3300049742 Bacteria 1730
285 Ga0501264_000041 3300049761 Bacteria 18291
286 nmdc:mga0qj67_48785_c1 3300050509 Bacteria 3345
287 nmdc:mga0qj67_53275_c1 3300050509 Bacteria 3203
288 2841762712 2841760612 Bacteria 6454112
289 2844110280 2844104063 Bacteria 6440972
290 2851251942 2851246043 Bacteria 6439203
291 2904425737 2904424332 Bacteria 7633521
292 2919479954 2919476304 Bacteria 5888696
293 rootL2_10004502
294 rootH1_10001909
295 rootH2_10006948
296 rootL2_10002019
297 rootL2_10069870
298 rootL2_10219027
299 rootL2_10345124
300 rootH1_10009096
301 rootH1_10108059
302 Ga0007417J51691_1040485
303 Ga0055524_1000003
304 Ga0065707_10082421
305 Ga0070676_10074810
306 Ga0070690_100000072
307 Ga0070690_100083099
308 Ga0070677_10006518
309 Ga0070682_100056204
310 Ga0070682_100080760
311 Ga0070689_100000039
312 Ga0070689_100104590
313 Ga0070687_100005857
314 Ga0070668_100108318
315 Ga0070669_100201280
316 Ga0070674_100154587
317 Ga0070673_100014922
318 Ga0070688_100000087
319 Ga0070688_100062483
320 Ga0070701_10000043
321 Ga0070700_100003551
322 Ga0070700_100011500
323 Ga0070694_100032019
324 Ga0068867_100005207
325 Ga0068867_100069211
326 Ga0068867_100273337
327 Ga0070685_10000211
328 Ga0070679_100053747
329 Ga0070672_100062027
330 Ga0070686_100000802
331 Ga0070686_100004912
332 Ga0070686_100086707
333 Ga0070696_100181221
334 Ga0070693_100014745
335 Ga0070704_100081040
336 Ga0068855_100174650
337 Ga0068852_100014726
338 Ga0068859_100000257
339 Ga0068859_100053058
340 Ga0068859_100246549
341 Ga0068866_10118827
342 Ga0068861_100002299
343 Ga0068861_100104028
344 Ga0068870_10103300
345 Ga0068860_100055219
346 Ga0068862_100083294
347 Ga0068862_100245024
348 Ga0081455_10016659
349 Ga0081538_10038544
350 Ga0068871_100186609
351 Ga0068865_100007295
352 Ga0068865_100037182
353 Ga0097620_100000257
354 Ga0097620_100053059
355 Ga0097620_100246560
356 Ga0099826_10000002
357 Ga0111539_10161336
358 Ga0105243_10192793
359 Ga0105248_10000428
360 Ga0105248_10036822
361 Ga0105249_10035641
362 Ga0157373_10139177
363 Ga0157371_10000001
364 Ga0157371_10000131
365 Ga0157371_10017349
366 Ga0157371_10022153
367 Ga0157371_10066893
368 Ga0157370_10190095
369 Ga0157374_10137378
370 Ga0157374_10266777
371 Ga0157378_10016745
372 Ga0157378_10135422
373 Ga0163162_10008300
374 Ga0163162_10427137
375 Ga0157372_10016391
376 Ga0157372_10120449
377 Ga0157375_10229922
378 Ga0163163_10000054
379 Ga0157380_10000642
380 Ga0157380_10009679
381 Ga0157380_10061859
382 Ga0157379_10177384
383 Ga0157376_10087964
384 Ga0182006_1014026
385 Ga0163161_10148665
386 Ga0209256_1000007
387 Ga0207682_10029757
388 Ga0207645_10049418
389 Ga0207643_10020283
390 Ga0207662_10033733
391 Ga0207652_10001726
392 Ga0207681_10112950
393 Ga0207681_10142760
394 Ga0207670_10000035
395 Ga0207669_10128868
396 Ga0207691_10029464
397 Ga0207711_10003450
398 Ga0207711_10057727
399 Ga0207689_10003184
400 Ga0207689_10099883
401 Ga0207651_10128571
402 Ga0207651_10291051
403 Ga0207678_10156052
404 Ga0207708_10006837
405 Ga0207708_10049491
406 Ga0207648_10052020
407 Ga0207648_10227143
408 Ga0207675_100095135
409 Ga0207683_10016355
410 Ga0207698_10021836
411 Ga0209282_1000001
412 Ga0268265_10100955
413 Ga0268264_10118492
414 Ga0265328_10008743
415 Ga0265325_10032171
416 Ga0265340_10053790
417 Ga0265339_10002699
418 Ga0265316_10015588
419 Ga0307513_10004439
420 Ga0307513_10029258
421 Ga0307509_10069258
422 Ga0307408_100245750
423 Ga0265313_10002977
424 Ga0265313_10037688
425 Ga0265342_10023156
426 Ga0307406_10120223
427 Ga0307407_10080888
428 Ga0307416_100000927
429 Ga0307415_100061117
430 Ga0307415_100158339
431 Ga0395901_0010667
432 Ga0439438_000018
433 Ga0439447_008035
434 Ga0439447_017762
435 Ga0439466_0005692
436 Ga0439465_0000273
437 Ga0451843_0299923
438 Ga0439431_0000253
439 Ga0439433_0001135
440 Ga0439442_002275
441 Ga0439445_0000495
442 Ga0439432_000809
443 Ga0439432_000850
444 Ga0439449_0000784
445 Ga0439452_000799
446 Ga0439434_0000456
447 Ga0451577_0235485
448 Ga0466972_0000130
449 Ga0453683_0000155
450 Ga0453684_0005308
451 Ga0453684_0038461
452 Ga0453684_0066827
453 Ga0453684_0107177
454 Ga0453684_0380764
455 Ga0451576_0000363
456 Ga0451576_0001097
457 Ga0451576_0003940
458 Ga0451576_0007074
459 Ga0451576_0031252
460 Ga0495629_0017373
461 Ga0495638_0000808
462 Ga0495638_0026297
463 Ga0495582_0007069
464 Ga0495605_0011697
465 Ga0495605_0016448
466 Ga0495584_0000236
467 Ga0495584_0015163
468 Ga0495584_0025989
469 Ga0495585_0000060
470 Ga0495585_0000843
471 Ga0495585_0004503
472 Ga0495585_0004607
473 Ga0495585_0024312
474 Ga0495585_0070425
475 Ga0495594_0009248
476 Ga0495594_0016272
477 Ga0495596_0000440
478 Ga0495596_0002923
479 Ga0495596_0014942
480 Ga0495607_0011510
481 Ga0495607_0016902
482 Ga0495583_0000266
483 Ga0495583_0009790
484 Ga0495583_0019501
485 Ga0495606_0074209
486 Ga0495610_0010399
487 Ga0495610_0015077
488 Ga0495616_0018358
489 Ga0495616_0049482
490 Ga0495620_0004271
491 Ga0495631_0000888
492 Ga0495631_0004228
493 Ga0495631_0030863
494 Ga0495632_0024870
495 Ga0495637_0024931
496 Ga0495643_0004201
497 Ga0495644_0020470
498 Ga0495644_0029636
499 Ga0495648_0002372
500 Ga0495648_0006714
501 Ga0495642_0001111
502 Ga0495642_0023125
503 Ga0495609_0000298
504 Ga0495609_0014862
505 Ga0495609_0023079
506 Ga0495622_0036143
507 Ga0495633_0000047
508 Ga0495633_0005855
509 Ga0495633_0016143
510 Ga0495633_0102246
511 Ga0495668_0007790
512 Ga0495668_0009163
513 Ga0495668_0022360
514 Ga0495668_0063346
515 Ga0495668_0101929
516 Ga0495611_0010940
517 Ga0495611_0012188
518 Ga0495611_0041653
519 Ga0495625_0001796
520 Ga0495625_0011865
521 Ga0495625_0014437
522 Ga0495625_0194362
523 Ga0495661_0000049
524 Ga0495661_0000273
525 Ga0495661_0014708
526 Ga0495661_0033844
527 Ga0495661_0049531
528 Ga0495661_0055425
529 Ga0495670_0003345
530 Ga0495670_0006988
531 Ga0495670_0009719
532 Ga0495670_0030857
533 Ga0495649_0003178
534 Ga0495649_0012564
535 Ga0495589_0000424
536 Ga0495636_0017495
537 Ga0495672_0000188
538 Ga0495683_0000005
539 Ga0495683_0008376
540 Ga0495683_0011455
541 Ga0495677_0000442
542 Ga0495677_0000999
543 Ga0495679_003384
544 Ga0495681_0007875
545 Ga0495681_0023180
546 Ga0495681_0052142
547 Ga0495686_0000109
548 Ga0495686_0029194
549 Ga0495686_0068037
550 Ga0495614_0006256
551 Ga0495626_0013320
552 Ga0495626_0032748
553 Ga0496102_0010784
554 Ga0496103_0002284
555 Ga0496105_0071670
556 Ga0496109_0050509
557 Ga0496110_0001143
558 Ga0496110_0011207
559 Ga0496111_0018844
560 Ga0496111_0096648
561 Ga0496112_0347416
562 Ga0496113_0003153
563 Ga0496121_0106758
564 Ga0496122_0000552
565 Ga0496123_0001031
566 Ga0496124_0121375
567 Ga0496125_0002211
568 Ga0496126_0001167
569 Ga0495678_000443
570 Ga0501300_002329
571 Ga0501034_0021655
572 Ga0501038_0057317
573 Ga0501202_003436
574 Ga0501235_042134
575 Ga0501257_000585
576 Ga0501080_0221684
577 Ga0501264_000041
578 nmdc:mga0qj67_48785_c1
579 nmdc:mga0qj67_53275_c1
580 2841762712
581 2844110280
582 2851251942
583 2904425737
584 2919479954

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06965

Na_H_antiport_1

Na+/H+ antiporter 1

64

431

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7a0y-assembly1.cif.gz_B structure of dimeric sodium proton antiporter nhaa k300r variant, at ph 8.2, crystallized with chimeric fab antibodies 0.9355 23 364
7a0w-assembly1.cif.gz_B structure of dimeric sodium proton antiporter nhaa, at ph 8.5, crystallized with chimeric fab antibodies 0.9332 23 364
4atv-assembly1.cif.gz_B structure of a triple mutant of the nhaa dimer, crystallised at low ph 0.924 22 364
4au5-assembly1.cif.gz_A structure of the nhaa dimer, crystallised at low ph 0.9233 22 367
7a0y-assembly1.cif.gz_B structure of dimeric sodium proton antiporter nhaa k300r variant, at ph 8.2, crystallized with chimeric fab antibodies 0.8577 23 364
ID Description Score Start End Superfamily
4atvA00 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold;Na+/H+ antiporter like domain 0.8916 22 367 1.20.1530.10
4atvA00 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold;Na+/H+ antiporter like domain 0.8333 22 367 1.20.1530.10
af_A0A0P0YC61_1_270_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.6801 112 361 1.20.1530.20
af_Q9SA37_20_418_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.6543 10 365 1.20.1530.20
af_Q0DIK5_28_436_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.647 59 374 1.20.1530.20
ID Description Score Start End GO Terms
AF-A0A6N4ECB5-F1-model_v4 deleted 0.9928 232 369
AF-A0A521V7B3-F1-model_v4 Na(+)/H(+) antiporter NhaA 0.9841 212 373 GO:0005886
GO:0006885
GO:0015385
AF-A0A136KXA9-F1-model_v4 Na+/H+ antiporter NhaA 0.9835 219 353 GO:0005886
GO:0006885
GO:0015385
AF-A0A4Q3VJH2-F1-model_v4 Na(+)/H(+) antiporter NhaA 0.9834 164 367 GO:0005886
GO:0006885
GO:0015385
AF-A0A838U5K5-F1-model_v4 Na+/H+ antiporter NhaA 0.9819 142 364 GO:0005886
GO:0006885
GO:0015385

Map