F390882

General Info

Members Datasets Scaffolds Average Seq Length
292 191 584 312

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10436575|Ga0105240_104365752
Length 341
Sequence MMLARVADSLYWIGRYVERAEHLCRLSDVMLTAALDRTESATQIARIALAAVGDPDDAAKALDPYQAARALVLNREDAGSVANSLARARENARQVRDQITTETWERLNLIHLRMSDPKAGRAFSEGSQAFLHDTIADLHLFKGAADATMSHGEGWRFLLLGVYLERAQLIGALLEVCFGDRKRRAINDHSALTGLLRMSCALEPYLRVYTADMQPRFILEFLLLDEDFPRSMRFCTARIEEHLSSISRHAEAAGATGPDRLAGRLRARLQYADIGEVQAGGASAFLSAVLDECAAVHRAVYETFVAYTLEQRLPAYGHPRPCSSPSAIRPATSTTNRSARA

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
5 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
6 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
7 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
8 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
9 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
10 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
31 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
32 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
45 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
50 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
74 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
75 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
76 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
79 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
80 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
81 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
82 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
83 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
84 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
85 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
86 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
87 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
88 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
89 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
90 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
91 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
94 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
95 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
96 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
97 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
98 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
99 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
100 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
101 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
102 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
103 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
104 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
105 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
106 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
107 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
108 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
109 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
110 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
111 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
112 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
113 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
114 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
117 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
118 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
119 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
120 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
121 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
122 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
123 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
124 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
125 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
126 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
129 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
130 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
131 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
132 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
133 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
134 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
135 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
139 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
140 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
141 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
142 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
143 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
144 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
145 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
146 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
147 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
148 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
149 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
150 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
151 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
152 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
153 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
154 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
155 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
156 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
157 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
158 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
159 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
160 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
161 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
162 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
163 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
164 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
165 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
166 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
167 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
168 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
169 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
170 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
171 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
172 2643221583 Caulobacter sp. Root655 Isolate Unclassified
173 2643221584 Caulobacter sp. Root656 Isolate Unclassified
174 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
175 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
176 2643221640 Caulobacter sp. Root342 Isolate Unclassified
177 2643221642 Caulobacter sp. Root343 Isolate Unclassified
178 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
179 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
180 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
181 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
182 2818991435 Caulobacter henricii 536 Isolate Unclassified
183 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
184 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
185 2849560528 Caulobacter zeae 410 Isolate Unclassified
186 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
187 2851153111 Caulobacter radicis 736 Isolate Unclassified
188 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
189 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
190 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
191 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.75
Metatranscriptomes 0
Isolates 9.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 26.03
Nodule 0
Rhizoplane 3.08
Rhizosphere 57.88
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10436575 3300009093 Bacteria 1468
2 rootH2_10079198 3300003320 Bacteria 2162
3 rootL2_10021029 3300003322 Bacteria 2032
4 rootL2_10021030 3300003322 Bacteria 3209
5 Ga0055537_1000948 3300003773 Bacteria 13430
6 Ga0055524_1005936 3300003775 Bacteria 5376
7 Ga0055524_1008738 3300003775 Bacteria 4185
8 Ga0055536_1000534 3300003781 Bacteria 26082
9 Ga0055536_1000546 3300003781 Bacteria 25810
10 Ga0055528_1002145 3300003790 Bacteria 10844
11 Ga0055530_10000173 3300003791 Bacteria 58836
12 Ga0055530_10003398 3300003791 Bacteria 9085
13 Ga0055530_10012073 3300003791 Bacteria 3041
14 Ga0055531_10000307 3300003794 Bacteria 48396
15 Ga0055531_10001968 3300003794 Bacteria 14326
16 Ga0055531_10005666 3300003794 Bacteria 7253
17 Ga0065165_1000238 3300005262 Bacteria 95406
18 Ga0070658_10108520 3300005327 Bacteria 2297
19 Ga0070676_10124899 3300005328 Bacteria 1620
20 Ga0070670_100036245 3300005331 Bacteria 4245
21 Ga0070691_10001402 3300005341 Bacteria 10291
22 Ga0070668_100001240 3300005347 Bacteria 18193
23 Ga0070668_100005899 3300005347 Bacteria 9080
24 Ga0070671_100365211 3300005355 Bacteria 1232
25 Ga0070673_100020783 3300005364 Bacteria 4742
26 Ga0070667_100202575 3300005367 Bacteria 1761
27 Ga0070681_10011333 3300005458 Bacteria 8819
28 Ga0070679_100043849 3300005530 Bacteria 4454
29 Ga0068853_100097640 3300005539 Bacteria 2594
30 Ga0068853_100499829 3300005539 Bacteria 1148
31 Ga0070665_100000166 3300005548 Bacteria 120121
32 Ga0070665_100152694 3300005548 Bacteria 2312
33 Ga0068859_100182267 3300005617 Bacteria 2183
34 Ga0068864_100056819 3300005618 Bacteria 3381
35 Ga0068864_100402112 3300005618 Bacteria 1301
36 Ga0068861_100209800 3300005719 Bacteria 1640
37 Ga0068863_100031458 3300005841 Bacteria 5062
38 Ga0068863_100056707 3300005841 Bacteria 3708
39 Ga0068858_100135778 3300005842 Bacteria 2308
40 Ga0068860_100000151 3300005843 Bacteria 112208
41 Ga0068860_100037367 3300005843 Bacteria 4649
42 Ga0068862_100040128 3300005844 Bacteria 3979
43 Ga0068862_100041741 3300005844 Bacteria 3905
44 Ga0068862_100102400 3300005844 Bacteria 2506
45 Ga0068862_100202039 3300005844 Bacteria 1792
46 Ga0075362_10049363 3300006177 Bacteria 1879
47 Ga0075369_10005364 3300006186 Bacteria 4785
48 Ga0075366_10006368 3300006195 Bacteria 6466
49 Ga0075366_10132465 3300006195 Bacteria 1504
50 Ga0075433_10174998 3300006852 Bacteria 1910
51 Ga0068865_100018332 3300006881 Bacteria 4515
52 Ga0097620_100182270 3300006931 Bacteria 2183
53 Ga0105240_10001734 3300009093 Bacteria 36806
54 Ga0105240_10002513 3300009093 Bacteria 29469
55 Ga0105240_10128754 3300009093 Bacteria 3039
56 Ga0105240_10525449 3300009093 Bacteria 1312
57 Ga0105248_10002901 3300009177 Bacteria 19023
58 Ga0105248_10202288 3300009177 Bacteria 2238
59 Ga0105237_10360204 3300009545 Bacteria 1459
60 Ga0105238_10010257 3300009551 Bacteria 9396
61 Ga0105238_10060242 3300009551 Bacteria 3801
62 Ga0105238_10133120 3300009551 Bacteria 2464
63 Ga0105238_10389027 3300009551 Bacteria 1387
64 Ga0105249_10092264 3300009553 Bacteria 2835
65 Ga0105239_10705469 3300010375 Bacteria 1154
66 Ga0157369_10306304 3300013105 Bacteria 1652
67 Ga0157369_10410278 3300013105 Bacteria 1405
68 Ga0163162_10127060 3300013306 Bacteria 2656
69 Ga0157375_10138791 3300013308 Bacteria 2556
70 Ga0213876_10000134 3300021384 Bacteria 80875
71 Ga0209565_1000127 3300025263 Bacteria 109900
72 Ga0209673_1001176 3300025273 Bacteria 28353
73 Ga0209676_1000136 3300025292 Bacteria 181860
74 Ga0209676_1000200 3300025292 Bacteria 133793
75 Ga0209564_1013621 3300025295 Bacteria 3434
76 Ga0209758_1000670 3300025297 Bacteria 51248
77 Ga0209758_1001727 3300025297 Bacteria 24340
78 Ga0209758_1004845 3300025297 Bacteria 10856
79 Ga0209050_1000031 3300025298 Bacteria 458181
80 Ga0209050_1000057 3300025298 Bacteria 326289
81 Ga0209050_1000568 3300025298 Bacteria 59952
82 Ga0209256_1001466 3300025299 Bacteria 24217
83 Ga0209256_1009547 3300025299 Bacteria 4233
84 Ga0209256_1019859 3300025299 Bacteria 2120
85 Ga0209257_1000142 3300025304 Bacteria 200756
86 Ga0209257_1000489 3300025304 Bacteria 71195
87 Ga0209257_1000771 3300025304 Bacteria 47537
88 Ga0209257_1000907 3300025304 Bacteria 41463
89 Ga0209257_1003136 3300025304 Bacteria 14751
90 Ga0207695_10000549 3300025913 Bacteria 77356
91 Ga0207695_10003745 3300025913 Bacteria 21141
92 Ga0207695_10011442 3300025913 Bacteria 10750
93 Ga0207695_10029827 3300025913 Bacteria 6018
94 Ga0207695_10427688 3300025913 Bacteria 1208
95 Ga0207657_10094509 3300025919 Bacteria 2489
96 Ga0207652_10060705 3300025921 Bacteria 3262
97 Ga0207681_10112253 3300025923 Bacteria 1985
98 Ga0207694_10258623 3300025924 Bacteria 1426
99 Ga0207694_10273798 3300025924 Bacteria 1385
100 Ga0207704_10002489 3300025938 Bacteria 8302
101 Ga0207711_10001488 3300025941 Bacteria 21817
102 Ga0207667_10064667 3300025949 Bacteria 3817
103 Ga0207651_10380052 3300025960 Bacteria 1197
104 Ga0207712_10344857 3300025961 Bacteria 1236
105 Ga0207668_10098618 3300025972 Bacteria 2165
106 Ga0207703_10637455 3300026035 Bacteria 1010
107 Ga0207641_10016672 3300026088 Bacteria 6015
108 Ga0207641_10034542 3300026088 Bacteria 4207
109 Ga0207676_10018330 3300026095 Bacteria 5087
110 Ga0207676_10041191 3300026095 Bacteria 3544
111 Ga0207676_10122938 3300026095 Bacteria 2192
112 Ga0207675_100295295 3300026118 Bacteria 1577
113 Ga0209981_1000509 3300027378 Bacteria 4949
114 Ga0209999_1002025 3300027543 Bacteria 3537
115 Ga0268266_10000005 3300028379 Bacteria 1448194
116 Ga0268266_10085503 3300028379 Bacteria 2756
117 Ga0268265_10013710 3300028380 Bacteria 5515
118 Ga0268265_10060933 3300028380 Bacteria 2894
119 Ga0268265_10075477 3300028380 Bacteria 2640
120 Ga0268264_10000399 3300028381 Bacteria 62094
121 Ga0268264_10021285 3300028381 Bacteria 5297
122 Ga0265334_10064012 3300028573 Bacteria 1382
123 Ga0265318_10057681 3300028577 Bacteria 1451
124 Ga0307517_10002579 3300028786 Bacteria 28853
125 Ga0307515_10049386 3300028794 Bacteria 6332
126 Ga0265338_10012115 3300028800 Bacteria 9852
127 Ga0265338_10068364 3300028800 Bacteria 3061
128 Ga0265324_10026579 3300029957 Bacteria 2048
129 Ga0265331_10093324 3300031250 Bacteria 1390
130 Ga0265327_10000290 3300031251 Bacteria 98475
131 Ga0265327_10005932 3300031251 Bacteria 9966
132 Ga0307513_10000082 3300031456 Bacteria 131779
133 Ga0307513_10000588 3300031456 Bacteria 52189
134 Ga0307513_10001556 3300031456 Bacteria 32890
135 Ga0307513_10015667 3300031456 Bacteria 9176
136 Ga0307516_10000042 3300031730 Bacteria 142687
137 Ga0307413_10086982 3300031824 Bacteria 2023
138 Ga0307510_10012139 3300033180 Bacteria 10212
139 Ga0307510_10062748 3300033180 Bacteria 3794
140 Ga0373936_0028018 3300035113 Bacteria 2212
141 Ga0373927_0000296 3300035695 Bacteria 39241
142 Ga0373925_0000022 3300037068 Bacteria 160046
143 Ga0395899_0001149 3300037312 Bacteria 23403
144 Ga0395900_0000010 3300037418 Bacteria 461364
145 Ga0395900_0181770 3300037418 Bacteria 2137
146 Ga0395898_0179097 3300037466 Bacteria 2025
147 Ga0395905_0195284 3300037471 Bacteria 1897
148 Ga0395901_0000007 3300038443 Bacteria 497408
149 Ga0436365_0100488 3300039437 Bacteria 21620
150 Ga0436363_0002958 3300039450 Bacteria 8441
151 Ga0439465_0011463 3300041413 Bacteria 2782
152 Ga0439465_0059156 3300041413 Bacteria 1268
153 Ga0439446_0019776 3300042156 Bacteria 1894
154 Ga0453684_0527178 3300044712 Bacteria 1304
155 Ga0495617_053890 3300046452 Bacteria 1336
156 Ga0495627_000595 3300046453 Bacteria 28818
157 Ga0495590_0001808 3300046457 Bacteria 9060
158 Ga0495638_0000260 3300046460 Bacteria 71071
159 Ga0495638_0000600 3300046460 Bacteria 40531
160 Ga0495638_0012065 3300046460 Bacteria 5937
161 Ga0495650_0000007 3300046471 Bacteria 718072
162 Ga0495607_0033835 3300046501 Bacteria 3107
163 Ga0495583_0000024 3300046506 Bacteria 274122
164 Ga0495583_0036470 3300046506 Bacteria 2339
165 Ga0495606_0007371 3300046507 Bacteria 9873
166 Ga0495610_0000029 3300046512 Bacteria 271137
167 Ga0495610_0003380 3300046512 Bacteria 12474
168 Ga0495610_0006101 3300046512 Bacteria 8405
169 Ga0495616_0001045 3300046513 Bacteria 19768
170 Ga0495630_0417028 3300046517 Bacteria 1029
171 Ga0495631_0039240 3300046518 Bacteria 2102
172 Ga0495632_0004508 3300046519 Bacteria 9438
173 Ga0495637_0005750 3300046520 Bacteria 6287
174 Ga0495648_0001025 3300046524 Bacteria 28499
175 Ga0495648_0148279 3300046524 Bacteria 1226
176 Ga0495654_0000054 3300046530 Bacteria 144303
177 Ga0495668_0000014 3300046616 Bacteria 442055
178 Ga0495668_0005558 3300046616 Bacteria 8485
179 Ga0495668_0019207 3300046616 Bacteria 3943
180 Ga0495668_0033840 3300046616 Bacteria 2870
181 Ga0495668_0039744 3300046616 Bacteria 2626
182 Ga0495625_0000051 3300046660 Bacteria 193325
183 Ga0495625_0001365 3300046660 Bacteria 30030
184 Ga0495625_0001649 3300046660 Bacteria 26176
185 Ga0495625_0016204 3300046660 Bacteria 5871
186 Ga0495625_0018463 3300046660 Bacteria 5444
187 Ga0495669_0000054 3300046684 Bacteria 78606
188 Ga0495669_0000470 3300046684 Bacteria 18780
189 Ga0495589_0025741 3300046794 Bacteria 2984
190 Ga0495660_0090630 3300046810 Bacteria 1590
191 Ga0495636_0106382 3300047318 Bacteria 1231
192 Ga0495674_0109642 3300047319 Bacteria 2341
193 Ga0495672_0022691 3300047320 Bacteria 4075
194 Ga0495672_0028887 3300047320 Bacteria 3501
195 Ga0495673_0000039 3300047469 Bacteria 301943
196 Ga0495673_0000123 3300047469 Bacteria 144484
197 Ga0495673_0018897 3300047469 Bacteria 3465
198 Ga0495686_0001349 3300047472 Bacteria 27429
199 Ga0495686_0007006 3300047472 Bacteria 8520
200 Ga0495686_0023176 3300047472 Bacteria 4097
201 Ga0495686_0036530 3300047472 Bacteria 3153
202 Ga0495615_0008248 3300048090 Bacteria 2008
203 Ga0496100_0317971 3300048903 Bacteria 1169
204 Ga0496101_0465084 3300048904 Bacteria 998
205 Ga0496102_0019556 3300048905 Bacteria 5965
206 Ga0496107_0000121 3300048910 Bacteria 38317
207 Ga0496107_0053338 3300048910 Bacteria 2917
208 Ga0496112_0027088 3300048915 Bacteria 5525
209 Ga0496115_0000731 3300048918 Bacteria 24280
210 Ga0496115_0012260 3300048918 Bacteria 6447
211 Ga0496115_0038040 3300048918 Bacteria 3817
212 Ga0496121_0025414 3300048924 Bacteria 5618
213 Ga0496124_0004365 3300048927 Bacteria 16541
214 Ga0496125_0024226 3300048928 Bacteria 5585
215 Ga0496125_0046068 3300048928 Bacteria 3663
216 Ga0496126_0000980 3300048929 Bacteria 48954
217 Ga0496126_0212722 3300048929 Bacteria 1627
218 Ga0495678_001060 3300049459 Bacteria 23311
219 Ga0501034_0010896 3300049571 Bacteria 9444
220 Ga0501034_0111745 3300049571 Bacteria 2723
221 Ga0501047_0115063 3300049581 Bacteria 2572
222 Ga0501238_000811 3300049671 Bacteria 3540
223 Ga0501238_001153 3300049671 Bacteria 3005
224 Ga0501044_0006780 3300049823 Bacteria 12626
225 nmdc:mga03683_39432_c1 3300050489 Bacteria 1934
226 nmdc:mga0k408_152459_c1 3300050493 Bacteria 1376
227 nmdc:mga07m45_223851_c1 3300050496 Bacteria 1094
228 nmdc:mga07m45_256165_c1 3300050496 Bacteria 1018
229 nmdc:mga0a205_102594_c1 3300050515 Bacteria 2451
230 nmdc:mga0sz30_5062_c1 3300050516 Bacteria 4818
231 Ga0500578_0000005 3300053086 Bacteria 243789
232 Ga0500643_000164 3300053087 Bacteria 66362
233 Ga0500643_015791 3300053087 Bacteria 2579
234 Ga0500643_016832 3300053087 Bacteria 2466
235 Ga0500643_022836 3300053087 Bacteria 2007
236 Ga0500644_0000191 3300053088 Bacteria 38234
237 Ga0500641_0001052 3300053096 Bacteria 9840
238 Ga0500555_045840 3300053103 Bacteria 1207
239 Ga0500556_0000492 3300053104 Bacteria 27371
240 Ga0500556_0005417 3300053104 Bacteria 3602
241 Ga0500556_0055258 3300053104 Bacteria 1447
242 Ga0500562_000831 3300053108 Bacteria 7504
243 Ga0500562_008667 3300053108 Bacteria 2570
244 Ga0500595_003466 3300053119 Bacteria 7351
245 Ga0500595_026917 3300053119 Bacteria 1976
246 Ga0500608_000093 3300053122 Bacteria 36398
247 Ga0500618_000129 3300053125 Bacteria 62710
248 Ga0500652_130117 3300053131 Bacteria 1050
249 Ga0500559_0000006 3300053136 Bacteria 229895
250 Ga0500559_0000008 3300053136 Bacteria 182182
251 Ga0500559_0001882 3300053136 Bacteria 11406
252 Ga0500559_0015573 3300053136 Bacteria 3211
253 Ga0500564_000045 3300053138 Bacteria 33460
254 Ga0500577_0000371 3300053142 Bacteria 11417
255 Ga0500616_0007023 3300053153 Bacteria 7232
256 Ga0500616_0057535 3300053153 Bacteria 2025
257 Ga0500616_0106263 3300053153 Bacteria 1363
258 Ga0500622_0000191 3300053156 Bacteria 64826
259 Ga0500622_0004076 3300053156 Bacteria 9370
260 Ga0500622_0021337 3300053156 Bacteria 3439
261 Ga0500634_0088416 3300053161 Bacteria 1579
262 Ga0500639_153538 3300053163 Bacteria 1058
263 Ga0500645_000141 3300053730 Bacteria 56609
264 Ga0500645_001089 3300053730 Bacteria 14915
265 Ga0500609_002327 3300053731 Bacteria 2711
266 2511121416 2510917020 Bacteria 5657507
267 2585149383 2582581279 Bacteria 4980720
268 2585154190 2582581280 Bacteria 5994497
269 2585197809 2582581293 Bacteria 5907401
270 2587919730 2585428106 Bacteria 5179711
271 2643747493 2643221545 Bacteria 5083237
272 2643778709 2643221552 Bacteria 5708754
273 2643925149 2643221583 Bacteria 5218014
274 2643930110 2643221584 Bacteria 5511711
275 2644001951 2643221598 Bacteria 4578346
276 2644085330 2643221614 Bacteria 4260023
277 2644226335 2643221640 Bacteria 5258820
278 2644235823 2643221642 Bacteria 5357871
279 2644342882 2643221661 Bacteria 4267604
280 2644366182 2643221666 Bacteria 4265935
281 2644509511 2643221691 Bacteria 5093099
282 2792463576 2791355048 Bacteria 5832535
283 2819538924 2818991435 Bacteria 5433759
284 2819648538 2818991454 Bacteria 5563326
285 2843748368 2843744320 Bacteria 5659202
286 2849564732 2849560528 Bacteria 5393480
287 2849577022 2849573788 Bacteria 5421256
288 2851155122 2851153111 Bacteria 5542585
289 2857506647 2857504554 Bacteria 5369913
290 2884963966 2884960567 Bacteria 5437054
291 2898329670 2898329390 Bacteria 5168154
292 2928533828 2928531327 Bacteria 5101314
293 Ga0105240_10436575
294 rootH2_10079198
295 rootL2_10021029
296 rootL2_10021030
297 Ga0055537_1000948
298 Ga0055524_1005936
299 Ga0055524_1008738
300 Ga0055536_1000534
301 Ga0055536_1000546
302 Ga0055528_1002145
303 Ga0055530_10000173
304 Ga0055530_10003398
305 Ga0055530_10012073
306 Ga0055531_10000307
307 Ga0055531_10001968
308 Ga0055531_10005666
309 Ga0065165_1000238
310 Ga0070658_10108520
311 Ga0070676_10124899
312 Ga0070670_100036245
313 Ga0070691_10001402
314 Ga0070668_100001240
315 Ga0070668_100005899
316 Ga0070671_100365211
317 Ga0070673_100020783
318 Ga0070667_100202575
319 Ga0070681_10011333
320 Ga0070679_100043849
321 Ga0068853_100097640
322 Ga0068853_100499829
323 Ga0070665_100000166
324 Ga0070665_100152694
325 Ga0068859_100182267
326 Ga0068864_100056819
327 Ga0068864_100402112
328 Ga0068861_100209800
329 Ga0068863_100031458
330 Ga0068863_100056707
331 Ga0068858_100135778
332 Ga0068860_100000151
333 Ga0068860_100037367
334 Ga0068862_100040128
335 Ga0068862_100041741
336 Ga0068862_100102400
337 Ga0068862_100202039
338 Ga0075362_10049363
339 Ga0075369_10005364
340 Ga0075366_10006368
341 Ga0075366_10132465
342 Ga0075433_10174998
343 Ga0068865_100018332
344 Ga0097620_100182270
345 Ga0105240_10001734
346 Ga0105240_10002513
347 Ga0105240_10128754
348 Ga0105240_10525449
349 Ga0105248_10002901
350 Ga0105248_10202288
351 Ga0105237_10360204
352 Ga0105238_10010257
353 Ga0105238_10060242
354 Ga0105238_10133120
355 Ga0105238_10389027
356 Ga0105249_10092264
357 Ga0105239_10705469
358 Ga0157369_10306304
359 Ga0157369_10410278
360 Ga0163162_10127060
361 Ga0157375_10138791
362 Ga0213876_10000134
363 Ga0209565_1000127
364 Ga0209673_1001176
365 Ga0209676_1000136
366 Ga0209676_1000200
367 Ga0209564_1013621
368 Ga0209758_1000670
369 Ga0209758_1001727
370 Ga0209758_1004845
371 Ga0209050_1000031
372 Ga0209050_1000057
373 Ga0209050_1000568
374 Ga0209256_1001466
375 Ga0209256_1009547
376 Ga0209256_1019859
377 Ga0209257_1000142
378 Ga0209257_1000489
379 Ga0209257_1000771
380 Ga0209257_1000907
381 Ga0209257_1003136
382 Ga0207695_10000549
383 Ga0207695_10003745
384 Ga0207695_10011442
385 Ga0207695_10029827
386 Ga0207695_10427688
387 Ga0207657_10094509
388 Ga0207652_10060705
389 Ga0207681_10112253
390 Ga0207694_10258623
391 Ga0207694_10273798
392 Ga0207704_10002489
393 Ga0207711_10001488
394 Ga0207667_10064667
395 Ga0207651_10380052
396 Ga0207712_10344857
397 Ga0207668_10098618
398 Ga0207703_10637455
399 Ga0207641_10016672
400 Ga0207641_10034542
401 Ga0207676_10018330
402 Ga0207676_10041191
403 Ga0207676_10122938
404 Ga0207675_100295295
405 Ga0209981_1000509
406 Ga0209999_1002025
407 Ga0268266_10000005
408 Ga0268266_10085503
409 Ga0268265_10013710
410 Ga0268265_10060933
411 Ga0268265_10075477
412 Ga0268264_10000399
413 Ga0268264_10021285
414 Ga0265334_10064012
415 Ga0265318_10057681
416 Ga0307517_10002579
417 Ga0307515_10049386
418 Ga0265338_10012115
419 Ga0265338_10068364
420 Ga0265324_10026579
421 Ga0265331_10093324
422 Ga0265327_10000290
423 Ga0265327_10005932
424 Ga0307513_10000082
425 Ga0307513_10000588
426 Ga0307513_10001556
427 Ga0307513_10015667
428 Ga0307516_10000042
429 Ga0307413_10086982
430 Ga0307510_10012139
431 Ga0307510_10062748
432 Ga0373936_0028018
433 Ga0373927_0000296
434 Ga0373925_0000022
435 Ga0395899_0001149
436 Ga0395900_0000010
437 Ga0395900_0181770
438 Ga0395898_0179097
439 Ga0395905_0195284
440 Ga0395901_0000007
441 Ga0436365_0100488
442 Ga0436363_0002958
443 Ga0439465_0011463
444 Ga0439465_0059156
445 Ga0439446_0019776
446 Ga0453684_0527178
447 Ga0495617_053890
448 Ga0495627_000595
449 Ga0495590_0001808
450 Ga0495638_0000260
451 Ga0495638_0000600
452 Ga0495638_0012065
453 Ga0495650_0000007
454 Ga0495607_0033835
455 Ga0495583_0000024
456 Ga0495583_0036470
457 Ga0495606_0007371
458 Ga0495610_0000029
459 Ga0495610_0003380
460 Ga0495610_0006101
461 Ga0495616_0001045
462 Ga0495630_0417028
463 Ga0495631_0039240
464 Ga0495632_0004508
465 Ga0495637_0005750
466 Ga0495648_0001025
467 Ga0495648_0148279
468 Ga0495654_0000054
469 Ga0495668_0000014
470 Ga0495668_0005558
471 Ga0495668_0019207
472 Ga0495668_0033840
473 Ga0495668_0039744
474 Ga0495625_0000051
475 Ga0495625_0001365
476 Ga0495625_0001649
477 Ga0495625_0016204
478 Ga0495625_0018463
479 Ga0495669_0000054
480 Ga0495669_0000470
481 Ga0495589_0025741
482 Ga0495660_0090630
483 Ga0495636_0106382
484 Ga0495674_0109642
485 Ga0495672_0022691
486 Ga0495672_0028887
487 Ga0495673_0000039
488 Ga0495673_0000123
489 Ga0495673_0018897
490 Ga0495686_0001349
491 Ga0495686_0007006
492 Ga0495686_0023176
493 Ga0495686_0036530
494 Ga0495615_0008248
495 Ga0496100_0317971
496 Ga0496101_0465084
497 Ga0496102_0019556
498 Ga0496107_0000121
499 Ga0496107_0053338
500 Ga0496112_0027088
501 Ga0496115_0000731
502 Ga0496115_0012260
503 Ga0496115_0038040
504 Ga0496121_0025414
505 Ga0496124_0004365
506 Ga0496125_0024226
507 Ga0496125_0046068
508 Ga0496126_0000980
509 Ga0496126_0212722
510 Ga0495678_001060
511 Ga0501034_0010896
512 Ga0501034_0111745
513 Ga0501047_0115063
514 Ga0501238_000811
515 Ga0501238_001153
516 Ga0501044_0006780
517 nmdc:mga03683_39432_c1
518 nmdc:mga0k408_152459_c1
519 nmdc:mga07m45_223851_c1
520 nmdc:mga07m45_256165_c1
521 nmdc:mga0a205_102594_c1
522 nmdc:mga0sz30_5062_c1
523 Ga0500578_0000005
524 Ga0500643_000164
525 Ga0500643_015791
526 Ga0500643_016832
527 Ga0500643_022836
528 Ga0500644_0000191
529 Ga0500641_0001052
530 Ga0500555_045840
531 Ga0500556_0000492
532 Ga0500556_0005417
533 Ga0500556_0055258
534 Ga0500562_000831
535 Ga0500562_008667
536 Ga0500595_003466
537 Ga0500595_026917
538 Ga0500608_000093
539 Ga0500618_000129
540 Ga0500652_130117
541 Ga0500559_0000006
542 Ga0500559_0000008
543 Ga0500559_0001882
544 Ga0500559_0015573
545 Ga0500564_000045
546 Ga0500577_0000371
547 Ga0500616_0007023
548 Ga0500616_0057535
549 Ga0500616_0106263
550 Ga0500622_0000191
551 Ga0500622_0004076
552 Ga0500622_0021337
553 Ga0500634_0088416
554 Ga0500639_153538
555 Ga0500645_000141
556 Ga0500645_001089
557 Ga0500609_002327
558 2511121416
559 2585149383
560 2585154190
561 2585197809
562 2587919730
563 2643747493
564 2643778709
565 2643925149
566 2643930110
567 2644001951
568 2644085330
569 2644226335
570 2644235823
571 2644342882
572 2644366182
573 2644509511
574 2792463576
575 2819538924
576 2819648538
577 2843748368
578 2849564732
579 2849577022
580 2851155122
581 2857506647
582 2884963966
583 2898329670
584 2928533828

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04168

Alpha-E

A predicted alpha-helical domain with a conserved ER motif.

2

305

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bpu-assembly1.cif.gz_A structural and mechanistic insights into the biosynthesis of digeranylgeranylglyceryl phosphate synthase in membranes 0.3378 10 300
7bpu-assembly1.cif.gz_A structural and mechanistic insights into the biosynthesis of digeranylgeranylglyceryl phosphate synthase in membranes 0.328 10 300
7zjj-assembly1.cif.gz_A cspz (bbcrasp-2) from borrelia burgdorferi strain b379 0.2974 7 242
6ob6-assembly2.cif.gz_B human equilibrative nucleoside transporter-1, s-(4-nitrobenzyl)-6-thioinosine bound, merohedrally twinned 0.2967 4 300
6loe-assembly1.cif.gz_F cryo-em structure of the dithionite-reduced photosynthetic alternative complex iii from roseiflexus castenholzii 0.2942 8 300
ID Description Score Start End Superfamily
af_Q1ACB3_255_386_1.20.120.550 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Membrane associated eicosanoid/glutathione metabolism-like domain 0.3973 152 299 1.20.120.550
af_Q1ACB3_255_386_1.20.120.550 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Membrane associated eicosanoid/glutathione metabolism-like domain 0.3802 152 299 1.20.120.550
af_C0H564_11_514_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3433 4 198 1.20.1250.20
af_Q91Y77_68_324_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3375 4 148 1.20.1250.20
af_A4HUX5_24_315_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2999 1 304 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A4Q3RU61-F1-model_v4 DUF403 domain-containing protein 0.9797 77 310
AF-A0A4Q3RU61-F1-model_v4 DUF403 domain-containing protein 0.9715 77 310
AF-A0A2R7RUN4-F1-model_v4 deleted 0.9704 155 310
AF-A0A2D7ZG15-F1-model_v4 DUF403 domain-containing protein 0.9702 1 310
AF-A0A2D7ZG15-F1-model_v4 DUF403 domain-containing protein 0.9671 1 310

Map