F390895

General Info

Members Datasets Scaffolds Average Seq Length
292 219 584 436

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10313640|Ga0114129_103136402
Length 423
Sequence LRFGGEFIWIDARQRLDILSHLIPFSSATEPRGERARVAPGDIAVGVVIGRASEYFDFFVYGIASVLVFPAVFFPFADRLHGTLYAFVLFAFAFIVRPLGTLAGMALQRHFGRGTKLTVALFLLGSSTGGSWDGLPSLLALNAPEKRRGWYAMLGQLGAPLGFIVACGLFLYLWANLSSADFLGWGWRFPFFAAFAINVVALFARLRLVVTREYERELQAHELQPCDVRDLLAAQGHNVFIGAFAALASYALFHLVTVFPLSWVALYSQQEIGQFLSVELAGAALAAAAMPLSGLVADRIGRRRTLGWVAVAIALFSVVAPWLLGGGDLAQDAFILVGFVLLGLSYGQAAGSVTSNFLPRFRYTGAALTADLAWLIGAAFAPLVALGLSARFGLVAVSLYLLSGAACTLLALRANRALSAVRD

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
7 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
8 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
9 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
10 3300003565 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_16_lowP_mix3_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
11 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
12 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
13 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
14 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
15 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
16 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
17 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
18 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
19 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
20 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
21 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
22 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
23 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
24 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
25 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
26 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
27 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
28 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
29 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
30 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
31 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
32 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
33 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
34 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
44 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
45 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
46 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
63 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
65 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
66 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
67 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
68 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
74 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
76 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
78 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
79 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
82 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
85 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
87 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
110 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
113 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
114 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
115 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
116 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
117 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
118 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
119 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
120 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
121 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
122 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
123 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
124 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
125 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
126 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
127 3300044650 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4E Metagenome Unclassified
128 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
129 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
130 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
131 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
132 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
133 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
134 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
135 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
136 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
137 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
138 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
139 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
140 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
141 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
142 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
143 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
144 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
145 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
146 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
147 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
148 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
149 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
150 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
151 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
152 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
153 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
154 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
155 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
156 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
157 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
158 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
159 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
160 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
161 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
162 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
163 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
164 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
165 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
166 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
167 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
168 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
169 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
170 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
171 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
172 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
173 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
174 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
175 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
176 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
177 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
178 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
179 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
180 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
181 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
182 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
183 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
184 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
185 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
186 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
187 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
188 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
189 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
190 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
191 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
192 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
193 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
194 2643221638 Duganella sp. Root336D2 Isolate Unclassified
195 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
196 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
197 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
198 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
199 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
200 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
201 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
202 2842711865 Duganella sp. R-73148 Isolate Unclassified
203 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
204 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
205 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
206 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
207 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
208 2885266251 Ralstonia sp. SET104 Isolate Nodule
209 2900577576 Ralstonia sp. TCR112 Isolate Rhizosphere
210 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
211 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
212 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
213 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
214 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
215 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
216 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
217 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
218 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
219 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 83.9
Metatranscriptomes 4.79
Isolates 11.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.92
Nodule 2.74
Rhizoplane 2.05
Rhizosphere 61.3
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10313640 3300009147 Bacteria 2087
2 JGI24740J21852_10000951 3300001979 Bacteria 12867
3 JGI24740J21852_10015315 3300001979 Bacteria 2804
4 JGI24739J22299_10000198 3300001989 Bacteria 19994
5 JGI25156J39149_1002066 3300002705 Bacteria 7626
6 JGI25154J39366_1000692 3300002738 Bacteria 15435
7 JGI25152J39213_1003786 3300002773 Bacteria 5025
8 JGI25150J39212_1003148 3300002774 Bacteria 3928
9 JGI25159J45721_1008180 3300002987 Bacteria 2902
10 JGI25161J50226_1004514 3300003374 Bacteria 2902
11 Ga0006560J51390_1030559 3300003565 Bacteria 1750
12 Ga0006562J51391_1019570 3300003578 Bacteria 3140
13 Ga0055538_1000002 3300003751 Bacteria 999437
14 Ga0055539_1000002 3300003752 Bacteria 999437
15 Ga0055539_1000062 3300003752 Bacteria 141171
16 Ga0055533_1000004 3300003756 Bacteria 999437
17 Ga0055533_1001544 3300003756 Bacteria 5999
18 Ga0055532_1000019 3300003758 Bacteria 286358
19 Ga0055525_1000002 3300003759 Bacteria 999437
20 Ga0055525_1000275 3300003759 Bacteria 47849
21 Ga0055535_1000014 3300003761 Bacteria 286358
22 Ga0055542_1000588 3300003762 Bacteria 31406
23 Ga0055529_1000086 3300003763 Bacteria 140681
24 Ga0055526_1006643 3300003771 Bacteria 6214
25 Ga0055524_1000010 3300003775 Bacteria 282893
26 Ga0055524_1005956 3300003775 Bacteria 5365
27 Ga0055534_1002008 3300003784 Bacteria 7403
28 Ga0055531_10016339 3300003794 Bacteria 3207
29 Ga0055541_1000002 3300003841 Bacteria 896405
30 Ga0055541_1000254 3300003841 Bacteria 19058
31 Ga0055543_1006165 3300004625 Bacteria 2940
32 Ga0065165_1017972 3300005262 Bacteria 2581
33 Ga0070666_10000012 3300005335 Bacteria 244720
34 Ga0070660_100110728 3300005339 Bacteria 2184
35 Ga0070661_100000054 3300005344 Bacteria 88505
36 Ga0070661_100002836 3300005344 Bacteria 11910
37 Ga0070668_100048689 3300005347 Bacteria 3260
38 Ga0070659_100000935 3300005366 Bacteria 21449
39 Ga0070659_100003721 3300005366 Bacteria 10877
40 Ga0070663_100000010 3300005455 Bacteria 158193
41 Ga0070663_100013650 3300005455 Bacteria 5188
42 Ga0070662_100041791 3300005457 Bacteria 3273
43 Ga0070685_10043015 3300005466 Bacteria 2581
44 Ga0070665_100005612 3300005548 Bacteria 12904
45 Ga0068855_100001647 3300005563 Bacteria 27987
46 Ga0070664_100000005 3300005564 Bacteria 222746
47 Ga0070664_100016726 3300005564 Bacteria 6016
48 Ga0068857_100004064 3300005577 Bacteria 12317
49 Ga0068857_100015353 3300005577 Bacteria 6688
50 Ga0068854_100000032 3300005578 Bacteria 106054
51 Ga0068856_100000054 3300005614 Bacteria 104246
52 Ga0068852_100063187 3300005616 Bacteria 3223
53 Ga0068858_100052528 3300005842 Bacteria 3771
54 Ga0070717_10083330 3300006028 Bacteria 2689
55 Ga0075364_10001424 3300006051 Bacteria 12961
56 Ga0079104_1004079 3300006946 Bacteria 6424
57 Ga0099826_10000002 3300006948 Bacteria 1125830
58 Ga0105240_10037048 3300009093 Bacteria 6270
59 Ga0105237_10000023 3300009545 Bacteria 226144
60 Ga0105237_10018943 3300009545 Bacteria 7114
61 Ga0105238_10000109 3300009551 Bacteria 90227
62 Ga0105238_10001243 3300009551 Bacteria 25672
63 Ga0105239_10020689 3300010375 Bacteria 7260
64 Ga0105239_10034292 3300010375 Bacteria 5573
65 Ga0105239_10073223 3300010375 Bacteria 3766
66 Ga0157314_1000101 3300012500 Bacteria 9089
67 Ga0157373_10008867 3300013100 Bacteria 7445
68 Ga0157371_10000103 3300013102 Bacteria 128611
69 Ga0157370_10001099 3300013104 Bacteria 33935
70 Ga0163162_10000324 3300013306 Bacteria 43904
71 Ga0157372_10000151 3300013307 Bacteria 75926
72 Ga0182006_1000747 3300015261 Bacteria 22238
73 Ga0182006_1008048 3300015261 Bacteria 4789
74 Ga0182006_1039640 3300015261 Bacteria 1858
75 Ga0163161_10029026 3300017792 Bacteria 3931
76 Ga0197907_10334798 3300020069 Bacteria 2245
77 Ga0206356_10282866 3300020070 Bacteria 2328
78 Ga0206349_1270541 3300020075 Bacteria 4430
79 Ga0206355_1081799 3300020076 Bacteria 2527
80 Ga0206351_10614052 3300020077 Bacteria 7874
81 Ga0154015_1423277 3300020610 Bacteria 27201
82 Ga0213872_10000039 3300021361 Bacteria 123507
83 Ga0213872_10008707 3300021361 Bacteria 4901
84 Ga0213872_10013064 3300021361 Bacteria 3892
85 Ga0213872_10019123 3300021361 Bacteria 3155
86 Ga0224712_10049439 3300022467 Bacteria 1629
87 Ga0224712_10059760 3300022467 Bacteria 1515
88 Ga0209436_102316 3300025208 Bacteria 5828
89 Ga0209436_103052 3300025208 Bacteria 4624
90 Ga0209784_100002 3300025224 Bacteria 1753105
91 Ga0209784_100003 3300025224 Bacteria 1379451
92 Ga0209566_100002 3300025225 Bacteria 2614868
93 Ga0209566_100003 3300025225 Bacteria 1753105
94 Ga0209674_100004 3300025226 Bacteria 1753105
95 Ga0209674_100008 3300025226 Bacteria 1076909
96 Ga0209147_100002 3300025229 Bacteria 2158988
97 Ga0209563_100004 3300025230 Bacteria 1814108
98 Ga0209563_100006 3300025230 Bacteria 1753105
99 Ga0209563_109217 3300025230 Bacteria 1507
100 Ga0209437_105832 3300025233 Bacteria 2081
101 Ga0209258_100002 3300025242 Bacteria 2158988
102 Ga0207425_1000001 3300025245 Bacteria 2525432
103 Ga0207425_1000249 3300025245 Bacteria 41006
104 Ga0209677_100003 3300025253 Bacteria 1753105
105 Ga0209677_100009 3300025253 Bacteria 749530
106 Ga0209759_1011670 3300025256 Bacteria 2480
107 Ga0209759_1017630 3300025256 Bacteria 1753
108 Ga0209129_1000001 3300025258 Bacteria 1452436
109 Ga0209129_1005202 3300025258 Bacteria 4720
110 Ga0209565_1000571 3300025263 Bacteria 25126
111 Ga0209455_1000073 3300025272 Bacteria 291417
112 Ga0209455_1000076 3300025272 Bacteria 284092
113 Ga0209130_1002642 3300025284 Bacteria 8604
114 Ga0209675_1001467 3300025291 Bacteria 13553
115 Ga0209564_1000434 3300025295 Bacteria 72534
116 Ga0209758_1000116 3300025297 Bacteria 198356
117 Ga0209758_1002679 3300025297 Bacteria 17573
118 Ga0209050_1006522 3300025298 Bacteria 6878
119 Ga0209256_1000007 3300025299 Bacteria 1136599
120 Ga0209256_1001951 3300025299 Bacteria 18696
121 Ga0209256_1007308 3300025299 Bacteria 5498
122 Ga0209257_1000293 3300025304 Bacteria 110422
123 Ga0207680_10000013 3300025903 Bacteria 244716
124 Ga0207647_10002969 3300025904 Bacteria 12759
125 Ga0207699_10128797 3300025906 Bacteria 1648
126 Ga0207705_10004077 3300025909 Bacteria 11089
127 Ga0207695_10002741 3300025913 Bacteria 25691
128 Ga0207695_10005250 3300025913 Bacteria 17292
129 Ga0207671_10000020 3300025914 Bacteria 309636
130 Ga0207671_10000033 3300025914 Bacteria 245869
131 Ga0207671_10012706 3300025914 Bacteria 6753
132 Ga0207657_10054528 3300025919 Bacteria 3457
133 Ga0207649_10004567 3300025920 Bacteria 7510
134 Ga0207649_10007885 3300025920 Bacteria 5794
135 Ga0207694_10000122 3300025924 Bacteria 82443
136 Ga0207694_10002664 3300025924 Bacteria 14468
137 Ga0207690_10001019 3300025932 Bacteria 17938
138 Ga0207690_10022760 3300025932 Bacteria 3902
139 Ga0207706_10095901 3300025933 Bacteria 2608
140 Ga0207679_10000020 3300025945 Bacteria 225727
141 Ga0207679_10000181 3300025945 Bacteria 51923
142 Ga0207667_10000032 3300025949 Bacteria 322253
143 Ga0207667_10009332 3300025949 Bacteria 11568
144 Ga0207667_10056055 3300025949 Bacteria 4141
145 Ga0207668_10037521 3300025972 Bacteria 3244
146 Ga0207640_10000017 3300025981 Bacteria 208145
147 Ga0207678_10000008 3300026067 Bacteria 168926
148 Ga0207678_10055455 3300026067 Bacteria 3414
149 Ga0207702_10000017 3300026078 Bacteria 222964
150 Ga0207674_10004820 3300026116 Bacteria 16164
151 Ga0207698_10121649 3300026142 Bacteria 2211
152 Ga0209282_1000001 3300027666 Bacteria 2450367
153 Ga0268266_10000021 3300028379 Bacteria 522453
154 Ga0307515_10000306 3300028794 Bacteria 121448
155 Ga0307408_100001280 3300031548 Bacteria 18860
156 Ga0307408_100047748 3300031548 Bacteria 3067
157 Ga0307408_100110077 3300031548 Bacteria 2114
158 Ga0307416_100002116 3300032002 Bacteria 11216
159 Ga0395899_0003332 3300037312 Bacteria 12734
160 Ga0395900_0016090 3300037418 Bacteria 7622
161 Ga0395900_0190823 3300037418 Bacteria 2078
162 Ga0395905_0055102 3300037471 Bacteria 3722
163 Ga0395905_0139059 3300037471 Bacteria 2285
164 Ga0436361_0014746 3300039447 Bacteria 7482
165 Ga0436361_0050170 3300039447 Bacteria 9588
166 Ga0436361_0577165 3300039447 Bacteria 73575
167 Ga0436361_0859400 3300039447 Bacteria 5038
168 Ga0439436_0000185 3300041404 Bacteria 14672
169 Ga0439461_0005639 3300041410 Bacteria 2143
170 Ga0439466_0010140 3300041411 Bacteria 3503
171 Ga0439465_0001494 3300041413 Bacteria 7586
172 Ga0439431_0000612 3300041997 Bacteria 7581
173 Ga0439433_0000572 3300041999 Bacteria 6984
174 Ga0439445_0000976 3300042004 Bacteria 6093
175 Ga0439432_000355 3300042006 Bacteria 16798
176 Ga0439449_0000776 3300042007 Bacteria 12298
177 Ga0439452_002159 3300042010 Bacteria 7439
178 Ga0439457_000792 3300042014 Bacteria 9431
179 Ga0466986_0076163 3300044650 Bacteria 2324
180 Ga0466972_0000034 3300044658 Bacteria 152086
181 Ga0466982_0000009 3300044672 Bacteria 221166
182 Ga0466966_0007198 3300044684 Bacteria 7374
183 Ga0466971_0003599 3300044719 Bacteria 6622
184 Ga0466968_0020190 3300044735 Bacteria 2686
185 Ga0466970_0038403 3300044765 Bacteria 2539
186 Ga0466957_0034066 3300044842 Bacteria 3055
187 Ga0495617_000162 3300046452 Bacteria 42454
188 Ga0495650_0000001 3300046471 Bacteria 1085492
189 Ga0495650_0000687 3300046471 Bacteria 43702
190 Ga0495584_0000646 3300046491 Bacteria 23214
191 Ga0495585_0000003 3300046492 Bacteria 406344
192 Ga0495585_0000321 3300046492 Bacteria 47441
193 Ga0495596_0021989 3300046500 Bacteria 2599
194 Ga0495583_0003326 3300046506 Bacteria 12445
195 Ga0495606_0000245 3300046507 Bacteria 95825
196 Ga0495606_0001150 3300046507 Bacteria 37527
197 Ga0495606_0003020 3300046507 Bacteria 18427
198 Ga0495606_0024452 3300046507 Bacteria 4352
199 Ga0495608_0027630 3300046511 Bacteria 3860
200 Ga0495610_0008721 3300046512 Bacteria 6516
201 Ga0495610_0008927 3300046512 Bacteria 6418
202 Ga0495616_0002507 3300046513 Bacteria 12141
203 Ga0495616_0003933 3300046513 Bacteria 9461
204 Ga0495628_0015220 3300046516 Bacteria 6426
205 Ga0495643_0000051 3300046522 Bacteria 207804
206 Ga0495648_0000011 3300046524 Bacteria 299518
207 Ga0495648_0008531 3300046524 Bacteria 8052
208 Ga0495648_0019763 3300046524 Bacteria 4721
209 Ga0495648_0022189 3300046524 Bacteria 4377
210 Ga0495648_0034863 3300046524 Bacteria 3269
211 Ga0495652_0053424 3300046529 Bacteria 3443
212 Ga0495597_0025053 3300046542 Bacteria 2748
213 Ga0495622_0000002 3300046557 Bacteria 321742
214 Ga0495633_0003109 3300046558 Bacteria 11259
215 Ga0495633_0018182 3300046558 Bacteria 3574
216 Ga0495633_0032527 3300046558 Bacteria 2519
217 Ga0495625_0002813 3300046660 Bacteria 18326
218 Ga0495588_0058327 3300046674 Bacteria 1995
219 Ga0495623_0121706 3300046679 Bacteria 1570
220 Ga0495649_0023907 3300046694 Bacteria 3411
221 Ga0495672_0000030 3300047320 Bacteria 305021
222 Ga0495672_0000036 3300047320 Bacteria 279648
223 Ga0495683_0000007 3300047323 Bacteria 268546
224 Ga0495683_0024095 3300047323 Bacteria 3125
225 Ga0495687_023585 3300047443 Bacteria 2937
226 Ga0495685_019071 3300047447 Bacteria 2355
227 Ga0495686_0000344 3300047472 Bacteria 76585
228 Ga0495686_0001081 3300047472 Bacteria 32449
229 Ga0495602_0066037 3300048088 Bacteria 3119
230 Ga0495626_0001005 3300048091 Bacteria 24227
231 Ga0496102_0000254 3300048905 Bacteria 69564
232 Ga0496103_0009377 3300048906 Bacteria 5797
233 Ga0496103_0058927 3300048906 Bacteria 2386
234 Ga0496108_0044323 3300048911 Bacteria 3714
235 Ga0496110_0033788 3300048913 Bacteria 4427
236 Ga0496114_0125038 3300048917 Bacteria 2216
237 Ga0496117_0113328 3300048920 Bacteria 1684
238 Ga0496119_0017504 3300048922 Bacteria 5386
239 Ga0496120_0005189 3300048923 Bacteria 10508
240 Ga0496121_0046000 3300048924 Bacteria 3741
241 Ga0496121_0051932 3300048924 Bacteria 3448
242 Ga0496124_0000226 3300048927 Bacteria 110448
243 Ga0496125_0001014 3300048928 Bacteria 43645
244 Ga0496125_0002023 3300048928 Bacteria 27465
245 Ga0496125_0002121 3300048928 Bacteria 26658
246 Ga0496126_0010279 3300048929 Bacteria 9829
247 Ga0495678_000040 3300049459 Bacteria 190664
248 Ga0501047_0090070 3300049581 Bacteria 2945
249 nmdc:mga00v17_23895_c1 3300050491 Bacteria 3540
250 nmdc:mga00v17_4347_c1 3300050491 Bacteria 7360
251 Ga0500594_0001524 3300053118 Bacteria 5040
252 Ga0500618_001858 3300053125 Bacteria 8824
253 Ga0500586_000250 3300053145 Bacteria 10708
254 Ga0500639_090868 3300053163 Bacteria 1521
255 Ga0587083_0000503 3300059505 Bacteria 3526
256 Ga0587067_000452 3300059640 Bacteria 3566
257 Ga0587072_000090 3300059643 Bacteria 6986
258 Ga0587111_0010710 3300060346 Bacteria 1581
259 Ga0466962_0000454 3300061719 Bacteria 17775
260 2511387311 2511231026 Bacteria 5225445
261 2513954658 2513237150 Bacteria 6553639
262 2521558427 2521172590 Bacteria 5047645
263 2550696009 2548876994 Bacteria 4904866
264 2553003403 2551306416 Bacteria 6152985
265 2643787201 2643221554 Bacteria 6603920
266 2644031250 2643221603 Bacteria 6147767
267 2644215722 2643221638 Bacteria 6579467
268 2765569544 2765235838 Bacteria 5445269
269 2808982025 2808606386 Bacteria 4471946
270 2809131648 2808606415 Bacteria 4576710
271 2809151270 2808606419 Bacteria 4576925
272 2819593508 2818991445 Bacteria 4955017
273 2819614341 2818991449 Bacteria 5518009
274 2839095574 2839094727 Bacteria 5534556
275 2842712408 2842711865 Bacteria 7155354
276 2842778549 2842775625 Bacteria 5587290
277 2842915791 2842914999 Bacteria 4419378
278 2852622448 2852618963 Bacteria 4577824
279 2857506519 2857504554 Bacteria 5369913
280 2885192612 2885192300 Bacteria 5882526
281 2885268522 2885266251 Bacteria 4796748
282 2900580665 2900577576 Bacteria 5438534
283 2904445037 2904439833 Bacteria 5931679
284 2904534134 2904530477 Bacteria 5876334
285 2904589024 2904584206 Bacteria 6028872
286 2904590495 2904589729 Bacteria 6113573
287 2904603631 2904601388 Bacteria 5884906
288 2919046861 2919046199 Bacteria 5567169
289 2919080356 2919079590 Bacteria 5946433
290 2923511531 2923510766 Bacteria 5926163
291 2928131642 2928130867 Bacteria 5467269
292 644752245 644736347 Bacteria 6476522
293 Ga0114129_10313640
294 JGI24740J21852_10000951
295 JGI24740J21852_10015315
296 JGI24739J22299_10000198
297 JGI25156J39149_1002066
298 JGI25154J39366_1000692
299 JGI25152J39213_1003786
300 JGI25150J39212_1003148
301 JGI25159J45721_1008180
302 JGI25161J50226_1004514
303 Ga0006560J51390_1030559
304 Ga0006562J51391_1019570
305 Ga0055538_1000002
306 Ga0055539_1000002
307 Ga0055539_1000062
308 Ga0055533_1000004
309 Ga0055533_1001544
310 Ga0055532_1000019
311 Ga0055525_1000002
312 Ga0055525_1000275
313 Ga0055535_1000014
314 Ga0055542_1000588
315 Ga0055529_1000086
316 Ga0055526_1006643
317 Ga0055524_1000010
318 Ga0055524_1005956
319 Ga0055534_1002008
320 Ga0055531_10016339
321 Ga0055541_1000002
322 Ga0055541_1000254
323 Ga0055543_1006165
324 Ga0065165_1017972
325 Ga0070666_10000012
326 Ga0070660_100110728
327 Ga0070661_100000054
328 Ga0070661_100002836
329 Ga0070668_100048689
330 Ga0070659_100000935
331 Ga0070659_100003721
332 Ga0070663_100000010
333 Ga0070663_100013650
334 Ga0070662_100041791
335 Ga0070685_10043015
336 Ga0070665_100005612
337 Ga0068855_100001647
338 Ga0070664_100000005
339 Ga0070664_100016726
340 Ga0068857_100004064
341 Ga0068857_100015353
342 Ga0068854_100000032
343 Ga0068856_100000054
344 Ga0068852_100063187
345 Ga0068858_100052528
346 Ga0070717_10083330
347 Ga0075364_10001424
348 Ga0079104_1004079
349 Ga0099826_10000002
350 Ga0105240_10037048
351 Ga0105237_10000023
352 Ga0105237_10018943
353 Ga0105238_10000109
354 Ga0105238_10001243
355 Ga0105239_10020689
356 Ga0105239_10034292
357 Ga0105239_10073223
358 Ga0157314_1000101
359 Ga0157373_10008867
360 Ga0157371_10000103
361 Ga0157370_10001099
362 Ga0163162_10000324
363 Ga0157372_10000151
364 Ga0182006_1000747
365 Ga0182006_1008048
366 Ga0182006_1039640
367 Ga0163161_10029026
368 Ga0197907_10334798
369 Ga0206356_10282866
370 Ga0206349_1270541
371 Ga0206355_1081799
372 Ga0206351_10614052
373 Ga0154015_1423277
374 Ga0213872_10000039
375 Ga0213872_10008707
376 Ga0213872_10013064
377 Ga0213872_10019123
378 Ga0224712_10049439
379 Ga0224712_10059760
380 Ga0209436_102316
381 Ga0209436_103052
382 Ga0209784_100002
383 Ga0209784_100003
384 Ga0209566_100002
385 Ga0209566_100003
386 Ga0209674_100004
387 Ga0209674_100008
388 Ga0209147_100002
389 Ga0209563_100004
390 Ga0209563_100006
391 Ga0209563_109217
392 Ga0209437_105832
393 Ga0209258_100002
394 Ga0207425_1000001
395 Ga0207425_1000249
396 Ga0209677_100003
397 Ga0209677_100009
398 Ga0209759_1011670
399 Ga0209759_1017630
400 Ga0209129_1000001
401 Ga0209129_1005202
402 Ga0209565_1000571
403 Ga0209455_1000073
404 Ga0209455_1000076
405 Ga0209130_1002642
406 Ga0209675_1001467
407 Ga0209564_1000434
408 Ga0209758_1000116
409 Ga0209758_1002679
410 Ga0209050_1006522
411 Ga0209256_1000007
412 Ga0209256_1001951
413 Ga0209256_1007308
414 Ga0209257_1000293
415 Ga0207680_10000013
416 Ga0207647_10002969
417 Ga0207699_10128797
418 Ga0207705_10004077
419 Ga0207695_10002741
420 Ga0207695_10005250
421 Ga0207671_10000020
422 Ga0207671_10000033
423 Ga0207671_10012706
424 Ga0207657_10054528
425 Ga0207649_10004567
426 Ga0207649_10007885
427 Ga0207694_10000122
428 Ga0207694_10002664
429 Ga0207690_10001019
430 Ga0207690_10022760
431 Ga0207706_10095901
432 Ga0207679_10000020
433 Ga0207679_10000181
434 Ga0207667_10000032
435 Ga0207667_10009332
436 Ga0207667_10056055
437 Ga0207668_10037521
438 Ga0207640_10000017
439 Ga0207678_10000008
440 Ga0207678_10055455
441 Ga0207702_10000017
442 Ga0207674_10004820
443 Ga0207698_10121649
444 Ga0209282_1000001
445 Ga0268266_10000021
446 Ga0307515_10000306
447 Ga0307408_100001280
448 Ga0307408_100047748
449 Ga0307408_100110077
450 Ga0307416_100002116
451 Ga0395899_0003332
452 Ga0395900_0016090
453 Ga0395900_0190823
454 Ga0395905_0055102
455 Ga0395905_0139059
456 Ga0436361_0014746
457 Ga0436361_0050170
458 Ga0436361_0577165
459 Ga0436361_0859400
460 Ga0439436_0000185
461 Ga0439461_0005639
462 Ga0439466_0010140
463 Ga0439465_0001494
464 Ga0439431_0000612
465 Ga0439433_0000572
466 Ga0439445_0000976
467 Ga0439432_000355
468 Ga0439449_0000776
469 Ga0439452_002159
470 Ga0439457_000792
471 Ga0466986_0076163
472 Ga0466972_0000034
473 Ga0466982_0000009
474 Ga0466966_0007198
475 Ga0466971_0003599
476 Ga0466968_0020190
477 Ga0466970_0038403
478 Ga0466957_0034066
479 Ga0495617_000162
480 Ga0495650_0000001
481 Ga0495650_0000687
482 Ga0495584_0000646
483 Ga0495585_0000003
484 Ga0495585_0000321
485 Ga0495596_0021989
486 Ga0495583_0003326
487 Ga0495606_0000245
488 Ga0495606_0001150
489 Ga0495606_0003020
490 Ga0495606_0024452
491 Ga0495608_0027630
492 Ga0495610_0008721
493 Ga0495610_0008927
494 Ga0495616_0002507
495 Ga0495616_0003933
496 Ga0495628_0015220
497 Ga0495643_0000051
498 Ga0495648_0000011
499 Ga0495648_0008531
500 Ga0495648_0019763
501 Ga0495648_0022189
502 Ga0495648_0034863
503 Ga0495652_0053424
504 Ga0495597_0025053
505 Ga0495622_0000002
506 Ga0495633_0003109
507 Ga0495633_0018182
508 Ga0495633_0032527
509 Ga0495625_0002813
510 Ga0495588_0058327
511 Ga0495623_0121706
512 Ga0495649_0023907
513 Ga0495672_0000030
514 Ga0495672_0000036
515 Ga0495683_0000007
516 Ga0495683_0024095
517 Ga0495687_023585
518 Ga0495685_019071
519 Ga0495686_0000344
520 Ga0495686_0001081
521 Ga0495602_0066037
522 Ga0495626_0001005
523 Ga0496102_0000254
524 Ga0496103_0009377
525 Ga0496103_0058927
526 Ga0496108_0044323
527 Ga0496110_0033788
528 Ga0496114_0125038
529 Ga0496117_0113328
530 Ga0496119_0017504
531 Ga0496120_0005189
532 Ga0496121_0046000
533 Ga0496121_0051932
534 Ga0496124_0000226
535 Ga0496125_0001014
536 Ga0496125_0002023
537 Ga0496125_0002121
538 Ga0496126_0010279
539 Ga0495678_000040
540 Ga0501047_0090070
541 nmdc:mga00v17_23895_c1
542 nmdc:mga00v17_4347_c1
543 Ga0500594_0001524
544 Ga0500618_001858
545 Ga0500586_000250
546 Ga0500639_090868
547 Ga0587083_0000503
548 Ga0587067_000452
549 Ga0587072_000090
550 Ga0587111_0010710
551 Ga0466962_0000454
552 2511387311
553 2513954658
554 2521558427
555 2550696009
556 2553003403
557 2643787201
558 2644031250
559 2644215722
560 2765569544
561 2808982025
562 2809131648
563 2809151270
564 2819593508
565 2819614341
566 2839095574
567 2842712408
568 2842778549
569 2842915791
570 2852622448
571 2857506519
572 2885192612
573 2885268522
574 2900580665
575 2904445037
576 2904534134
577 2904589024
578 2904590495
579 2904603631
580 2919046861
581 2919080356
582 2923511531
583 2928131642
584 644752245

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

58

382

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
7sp5-assembly1.cif.gz_A crystal structure of a eukaryotic phosphate transporter 0.7882 24 408
7sp5-assembly2.cif.gz_B crystal structure of a eukaryotic phosphate transporter 0.7692 26 408
8sc3-assembly1.cif.gz_A human oct1 bound to fenoterol in inward-open conformation 0.7672 59 406
8jt9-assembly1.cif.gz_A human vmat2 complex with ketanserin 0.7411 24 410
4gby-assembly1.cif.gz_A the structure of the mfs (major facilitator superfamily) proton:xylose symporter xyle bound to d-xylose 0.7392 26 408
ID Description Score Start End Superfamily
af_P76350_21_243_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9157 27 235 1.20.1250.20
af_P0C0L7_23_240_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9141 26 238 1.20.1250.20
af_P0C0L7_23_240_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8863 26 238 1.20.1250.20
af_P37643_245_439_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8859 251 406 1.20.1250.20
af_Q2G0K4_17_228_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8749 27 236 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A519LZQ1-F1-model_v4 MFS transporter 0.9824 16 390 GO:0005886
GO:0022857
AF-A0A527HA57-F1-model_v4 MHS family MFS transporter 0.9759 20 365 GO:0005886
GO:0022857
AF-A0A529M8X8-F1-model_v4 MHS family MFS transporter 0.9702 23 310 GO:0005886
GO:0022857
AF-A0A529VVH3-F1-model_v4 deleted 0.9656 18 220
AF-A0A529M8X8-F1-model_v4 MHS family MFS transporter 0.9604 23 310 GO:0005886
GO:0022857

Map