F390953

General Info

Members Datasets Scaffolds Average Seq Length
292 212 584 291

Family's Representative Sequence

Representative Sequence 3300025258|Ga0209129_1003811|Ga0209129_10038115
Length 350
Sequence MWRRLMPFFGAKTERFNAFARFAAREAFGRRLACLSASPTLSRDSHFPFEKPLNFSPMTAPRYRGRFAPSPTGALHFGSLVAAVGSWLVARHHGGEWLVRVEDIDPPREVPGSAVSILSTLDAFGLAPDAAPVYQSQRHTLYTAAFERLRDAGHLFPCWCSRADLAAHGGLHRDGRCIAAPDPARPPAWRLRSPDRVVGWHDDLQGPQVENLRDVAGDFVIRRVEGLWSYQLACVVDDGDQGITHVVRGADLLDSTARQIHLQGLLGLPTPGYLHLPLVVDAEGRKLSKSTAALPVDPADPLPALHEALTWLGVAAPGAAASPEALLRHALDGFSPATLRRSSLTAGTTL

Samples

Sample ID Description Type Environment
1 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
4 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
5 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
6 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
10 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
11 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
12 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
13 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
14 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
15 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
28 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
29 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
30 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
38 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
44 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
45 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
49 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
51 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
52 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
54 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
56 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
57 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
59 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
80 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
81 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
82 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
83 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
84 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
85 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
86 3300044661 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COC2E Metagenome Unclassified
87 3300044663 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA2E_TR Metagenome Unclassified
88 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
89 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
90 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
91 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
92 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
93 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
96 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
97 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
98 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
99 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
100 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
101 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
102 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
103 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
104 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
105 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
106 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
107 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
108 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
109 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
110 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
111 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
112 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
113 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
114 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
117 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
118 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
119 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
120 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
121 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
122 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
123 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
124 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
125 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
126 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
129 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
130 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
131 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
132 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
133 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
134 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
135 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
136 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
137 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
138 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
139 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
140 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
141 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
142 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
149 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
150 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
152 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
153 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
154 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
155 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
156 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
157 2593339238 Luteibacter sp. UNCMF366Tsu5.1 Isolate Unclassified
158 2593339239 Luteibacter sp. UNCMF331Sha3.1 Isolate Unclassified
159 2599185169 Klebsiella quasipneumoniae NFPP35 Isolate Rhizoplane
160 2600255254 Klebsiella quasipneumoniae NFIX15 Isolate Rhizoplane
161 2600255255 Klebsiella quasipneumoniae NFIX23 Isolate Rhizoplane
162 2600255280 Klebsiella quasipneumoniae NFIX42 Isolate Rhizoplane
163 2600255281 Klebsiella quasipneumoniae NFIX43 Isolate Rhizoplane
164 2600255287 Klebsiella quasipneumoniae NFIX11 Isolate Rhizoplane
165 2600255288 Klebsiella quasipneumoniae NFIX14 Isolate Rhizoplane
166 2600255289 Klebsiella quasipneumoniae NFIX16 Isolate Rhizoplane
167 2600255290 Klebsiella quasipneumoniae NFIX17 Isolate Rhizoplane
168 2600255291 Klebsiella quasipneumoniae NFIX19 Isolate Rhizoplane
169 2600255298 Klebsiella quasipneumoniae NFIX21 Isolate Rhizoplane
170 2600255299 Klebsiella quasipneumoniae NFIX22 Isolate Rhizoplane
171 2600255300 Klebsiella quasipneumoniae NFIX30 Isolate Rhizoplane
172 2600255301 Klebsiella quasipneumoniae NFIX33 Isolate Rhizoplane
173 2600255302 Klebsiella quasipneumoniae NFIX35 Isolate Rhizoplane
174 2600255303 Klebsiella quasipneumoniae NFIX36 Isolate Rhizoplane
175 2600255304 Klebsiella quasipneumoniae NFIX37 Isolate Rhizoplane
176 2600255305 Klebsiella quasipneumoniae NFIX41 Isolate Rhizoplane
177 2600255306 Klebsiella quasipneumoniae NFIX44 Isolate Rhizoplane
178 2600255307 Klebsiella quasipneumoniae NFIX56 Isolate Rhizoplane
179 2600255309 Klebsiella sp. NFIX53 Isolate Rhizoplane
180 2600255392 Klebsiella quasipneumoniae NFIX54 Isolate Rhizoplane
181 2602042052 Klebsiella quasipneumoniae NFIX18 Isolate Rhizoplane
182 2602042053 Klebsiella quasipneumoniae NFIX12 Isolate Rhizoplane
183 2602042103 Klebsiella quasipneumoniae NFIX29 Isolate Rhizoplane
184 2602042104 Klebsiella quasipneumoniae NFIX26 Isolate Rhizoplane
185 2602042105 Klebsiella quasipneumoniae NFIX25 Isolate Rhizoplane
186 2602042106 Klebsiella quasipneumoniae NFIX13 Isolate Rhizoplane
187 2602042109 Klebsiella aerogenes NFIX39 Isolate Rhizoplane
188 2602042110 Klebsiella quasipneumoniae NFIX40 Isolate Rhizoplane
189 2602042111 Klebsiella quasipneumoniae NFIX20 Isolate Rhizoplane
190 2603880178 Klebsiella quasipneumoniae NFIX34 Isolate Rhizoplane
191 2603880184 Klebsiella quasipneumoniae NFIX27 Isolate Rhizoplane
192 2603880202 Klebsiella quasipneumoniae NFIX38 Isolate Rhizoplane
193 2603880211 Klebsiella quasipneumoniae NFIX24 Isolate Rhizoplane
194 2636415599 Klebsiella variicola DX120E Isolate Unclassified
195 2675903046 Klebsiella quasipneumoniae NFIX52 Isolate Rhizoplane
196 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
197 2734482264 Dyella sp. AD052 Isolate Unclassified
198 2775507074 Klebsiella sp. D5A Isolate Unclassified
199 2818991440 Luteibacter yeojuensis 583 Isolate Unclassified
200 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
201 2842918807 Luteibacter sp. R-73110 Isolate Unclassified
202 2884338543 Luteibacter pinisoli MAH-14 Isolate Rhizosphere
203 2904463128 Luteibacter yeojuensis 3191 Isolate Unclassified
204 2904513164 Klebsiella variicola 1431 Isolate Rhizosphere
205 2919085039 Luteibacter sp. 1214 Isolate Unclassified
206 2919108558 Klebsiella sp. 1400 Isolate Rhizosphere
207 2919404418 Luteibacter sp. 3190 Isolate Unclassified
208 2941471342 Luteibacter sp. 621 Isolate Unclassified
209 2953994433 Luteibacter sp. W1I16 Isolate Rhizosphere
210 2969079654 Klebsiella variicola E57-7 Isolate Unclassified
211 2984559226 Klebsiella variicola SORGH_AS834 Isolate Aerial Root
212 2984595703 Klebsiella variicola SORGH_AS1070 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 79.45
Metatranscriptomes 1.37
Isolates 19.18

Biome Distribution

Category Percentage (%)
Aerial Root 0.68
Bulb 0
Endosphere 11.64
Nodule 0
Rhizoplane 14.38
Rhizosphere 52.74
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0209129_1003811 3300025258 Bacteria 6308
2 JGI24739J22299_10000590 3300001989 Bacteria 13089
3 JGI25157J39369_1000172 3300002741 Bacteria 54469
4 JGI25152J39213_1000074 3300002773 Bacteria 66463
5 JGI25150J39212_1000056 3300002774 Bacteria 66462
6 JGI25151J46595_10000178 3300003187 Bacteria 80734
7 JGI25153J46596_10000131 3300003215 Bacteria 80734
8 rootH1_10070320 3300003323 Bacteria 2239
9 rootH1_10070321 3300003323 Bacteria 1885
10 Ga0006562J51391_1002017 3300003578 Bacteria 7630
11 Ga0006562J51391_1002018 3300003578 Bacteria 8578
12 Ga0006562J51391_1039586 3300003578 Bacteria 6710
13 Ga0006562J51391_1039587 3300003578 Bacteria 3370
14 Ga0055525_1000192 3300003759 Bacteria 72944
15 Ga0055527_1000041 3300003760 Bacteria 116981
16 Ga0055535_1000193 3300003761 Bacteria 64634
17 Ga0055542_1000152 3300003762 Bacteria 87561
18 Ga0055529_1000511 3300003763 Bacteria 34648
19 Ga0065165_1000186 3300005262 Bacteria 108712
20 Ga0070658_10014261 3300005327 Bacteria 6376
21 Ga0070660_100071322 3300005339 Bacteria 2712
22 Ga0070660_100184400 3300005339 Bacteria 1689
23 Ga0070659_100019799 3300005366 Bacteria 5108
24 Ga0070659_100197858 3300005366 Bacteria 1653
25 Ga0070681_10073118 3300005458 Bacteria 3390
26 Ga0070693_100082110 3300005547 Bacteria 1924
27 Ga0068855_100052328 3300005563 Bacteria 4808
28 Ga0068857_100003286 3300005577 Bacteria 13434
29 Ga0068857_100084775 3300005577 Bacteria 2831
30 Ga0068854_100016857 3300005578 Bacteria 4878
31 Ga0068856_100001902 3300005614 Bacteria 21771
32 Ga0068856_100004668 3300005614 Bacteria 13605
33 Ga0068851_10038446 3300005834 Bacteria 2401
34 Ga0068858_100019595 3300005842 Bacteria 6325
35 Ga0075369_10053563 3300006186 Bacteria 1751
36 Ga0105251_10005384 3300009011 Bacteria 8380
37 Ga0105251_10086377 3300009011 Bacteria 1445
38 Ga0105244_10000256 3300009036 Bacteria 54425
39 Ga0105244_10000972 3300009036 Bacteria 24082
40 Ga0105250_10000378 3300009092 Bacteria 33263
41 Ga0105240_10018311 3300009093 Bacteria 9413
42 Ga0105247_10010160 3300009101 Bacteria 5702
43 Ga0105243_10019829 3300009148 Bacteria 5100
44 Ga0105237_10000307 3300009545 Bacteria 68076
45 Ga0105238_10020417 3300009551 Bacteria 6744
46 Ga0105239_10000020 3300010375 Bacteria 264435
47 Ga0105239_10004742 3300010375 Bacteria 16142
48 Ga0105239_10134504 3300010375 Bacteria 2752
49 Ga0157314_1000229 3300012500 Bacteria 6098
50 Ga0157373_10007467 3300013100 Bacteria 8134
51 Ga0157371_10008848 3300013102 Bacteria 7975
52 Ga0157370_10016285 3300013104 Bacteria 7533
53 Ga0157370_10151314 3300013104 Bacteria 2159
54 Ga0157372_10039090 3300013307 Bacteria 5237
55 Ga0157375_10024245 3300013308 Bacteria 5612
56 Ga0182006_1000077 3300015261 Bacteria 127377
57 Ga0182006_1045359 3300015261 Bacteria 1710
58 Ga0182005_1000060 3300015265 Bacteria 98664
59 Ga0182005_1000829 3300015265 Bacteria 13879
60 Ga0182005_1020611 3300015265 Bacteria 1813
61 Ga0209674_102011 3300025226 Bacteria 4695
62 Ga0209672_100005 3300025228 Bacteria 1069303
63 Ga0209563_100023 3300025230 Bacteria 636844
64 Ga0209437_108155 3300025233 Bacteria 1682
65 Ga0209258_100006 3300025242 Bacteria 1069303
66 Ga0207425_1000108 3300025245 Bacteria 77709
67 Ga0209026_1000074 3300025250 Bacteria 203820
68 Ga0209148_1000012 3300025254 Bacteria 1069303
69 Ga0209148_1002015 3300025254 Bacteria 7953
70 Ga0209759_1000110 3300025256 Bacteria 144917
71 Ga0209129_1000178 3300025258 Bacteria 92006
72 Ga0209455_1000008 3300025272 Bacteria 1069303
73 Ga0209025_1000012 3300025294 Bacteria 924362
74 Ga0209758_1000018 3300025297 Bacteria 753320
75 Ga0209758_1000276 3300025297 Bacteria 102362
76 Ga0209758_1015376 3300025297 Bacteria 3968
77 Ga0209758_1043606 3300025297 Bacteria 1650
78 Ga0209256_1003347 3300025299 Bacteria 11363
79 Ga0207426_1010116 3300025302 Bacteria 3684
80 Ga0209257_1018459 3300025304 Bacteria 2682
81 Ga0207696_1000066 3300025711 Bacteria 231203
82 Ga0207713_1000048 3300025735 Bacteria 228272
83 Ga0207710_10007397 3300025900 Bacteria 4650
84 Ga0207647_10000006 3300025904 Bacteria 214791
85 Ga0207647_10005801 3300025904 Bacteria 9004
86 Ga0207705_10017451 3300025909 Bacteria 5139
87 Ga0207695_10000408 3300025913 Bacteria 95748
88 Ga0207695_10001923 3300025913 Bacteria 32294
89 Ga0207695_10002881 3300025913 Bacteria 24943
90 Ga0207695_10016394 3300025913 Bacteria 8668
91 Ga0207671_10000031 3300025914 Bacteria 247030
92 Ga0207657_10140877 3300025919 Bacteria 1970
93 Ga0207657_10174602 3300025919 Bacteria 1740
94 Ga0207649_10060845 3300025920 Bacteria 2374
95 Ga0207694_10027343 3300025924 Bacteria 4344
96 Ga0207690_10014926 3300025932 Bacteria 4702
97 Ga0207706_10177153 3300025933 Bacteria 1873
98 Ga0207667_10000313 3300025949 Bacteria 67227
99 Ga0207640_10002109 3300025981 Bacteria 10687
100 Ga0207639_10005313 3300026041 Bacteria 8698
101 Ga0207678_10043416 3300026067 Bacteria 3890
102 Ga0207702_10000143 3300026078 Bacteria 84903
103 Ga0207702_10004101 3300026078 Bacteria 13066
104 Ga0207641_10380896 3300026088 Bacteria 1351
105 Ga0207674_10007552 3300026116 Bacteria 12665
106 Ga0207674_10057459 3300026116 Bacteria 3944
107 Ga0209371_1003386 3300027312 Bacteria 7813
108 Ga0268256_1003076 3300030500 Bacteria 7816
109 Ga0439436_0000013 3300041404 Bacteria 91059
110 Ga0439436_0041245 3300041404 Bacteria 1321
111 Ga0439465_0000134 3300041413 Bacteria 18085
112 Ga0450908_002029 3300042184 Bacteria 3962
113 Ga0466969_0115883 3300044656 Bacteria 1250
114 Ga0466969_0131585 3300044656 Bacteria 1159
115 Ga0466972_0000355 3300044658 Bacteria 24924
116 Ga0466975_0066337 3300044661 Bacteria 2577
117 Ga0466989_0020362 3300044663 Bacteria 3820
118 Ga0466982_0000004 3300044672 Bacteria 386724
119 Ga0466982_0000110 3300044672 Bacteria 20099
120 Ga0466965_0012309 3300044683 Bacteria 4022
121 Ga0466966_0000881 3300044684 Bacteria 19146
122 Ga0466966_0185384 3300044684 Bacteria 1261
123 Ga0466961_0005416 3300044693 Bacteria 8040
124 Ga0466961_0021217 3300044693 Bacteria 4181
125 Ga0466961_0162505 3300044693 Bacteria 1391
126 Ga0466971_0013688 3300044719 Bacteria 3567
127 Ga0466968_0003222 3300044735 Bacteria 6021
128 Ga0466970_0000900 3300044765 Bacteria 14369
129 Ga0466957_0010229 3300044842 Bacteria 5374
130 Ga0466957_0035675 3300044842 Bacteria 2985
131 Ga0466960_0012574 3300044901 Bacteria 3576
132 Ga0466959_0001013 3300045049 Bacteria 16709
133 Ga0466959_0021859 3300045049 Bacteria 4724
134 Ga0466959_0030510 3300045049 Bacteria 3991
135 Ga0466958_0027878 3300045836 Bacteria 3344
136 Ga0466958_0083827 3300045836 Bacteria 1965
137 Ga0495617_000564 3300046452 Bacteria 19070
138 Ga0495638_0000276 3300046460 Bacteria 69447
139 Ga0495638_0142028 3300046460 Bacteria 1400
140 Ga0495650_0038580 3300046471 Bacteria 2068
141 Ga0495584_0010143 3300046491 Bacteria 4838
142 Ga0495585_0000028 3300046492 Bacteria 146662
143 Ga0495585_0001902 3300046492 Bacteria 15710
144 Ga0495607_0000151 3300046501 Bacteria 72430
145 Ga0495607_0000764 3300046501 Bacteria 30834
146 Ga0495583_0058813 3300046506 Bacteria 1724
147 Ga0495606_0000894 3300046507 Bacteria 44402
148 Ga0495610_0003663 3300046512 Bacteria 11823
149 Ga0495616_0000163 3300046513 Bacteria 58433
150 Ga0495616_0005648 3300046513 Bacteria 7658
151 Ga0495620_0000187 3300046515 Bacteria 47716
152 Ga0495631_0000262 3300046518 Bacteria 36730
153 Ga0495631_0000353 3300046518 Bacteria 31677
154 Ga0495632_0000032 3300046519 Bacteria 164561
155 Ga0495632_0022559 3300046519 Bacteria 3372
156 Ga0495632_0063282 3300046519 Bacteria 1791
157 Ga0495637_0008358 3300046520 Bacteria 5088
158 Ga0495648_0000781 3300046524 Bacteria 33916
159 Ga0495648_0006688 3300046524 Bacteria 9337
160 Ga0495611_0000001 3300046648 Bacteria 2628469
161 Ga0495611_0000007 3300046648 Bacteria 224144
162 Ga0495625_0000001 3300046660 Bacteria 1641829
163 Ga0495670_0001435 3300046691 Bacteria 11676
164 Ga0495670_0007195 3300046691 Bacteria 5476
165 Ga0495671_0005822 3300046692 Bacteria 7179
166 Ga0495671_0078541 3300046692 Bacteria 1618
167 Ga0495589_0000371 3300046794 Bacteria 34490
168 Ga0495660_0000146 3300046810 Bacteria 76894
169 Ga0495683_0012063 3300047323 Bacteria 4542
170 Ga0495679_000001 3300047446 Bacteria 1607568
171 Ga0495673_0000010 3300047469 Bacteria 709599
172 Ga0495673_0000414 3300047469 Bacteria 49665
173 Ga0495681_0058175 3300047470 Bacteria 1792
174 Ga0495686_0000123 3300047472 Bacteria 159841
175 Ga0495686_0000792 3300047472 Bacteria 41248
176 Ga0495686_0018377 3300047472 Bacteria 4693
177 Ga0495686_0022198 3300047472 Bacteria 4201
178 Ga0496100_0108616 3300048903 Bacteria 1924
179 Ga0496101_0008290 3300048904 Bacteria 6789
180 Ga0496101_0025808 3300048904 Bacteria 4079
181 Ga0496102_0599911 3300048905 Bacteria 1024
182 Ga0496105_0005061 3300048908 Bacteria 9985
183 Ga0496106_0062141 3300048909 Bacteria 2835
184 Ga0496116_0086900 3300048919 Bacteria 1916
185 Ga0496116_0119111 3300048919 Bacteria 1532
186 Ga0496117_0013922 3300048920 Bacteria 6973
187 Ga0496117_0015315 3300048920 Bacteria 6544
188 Ga0496117_0126408 3300048920 Bacteria 1559
189 Ga0496118_0001213 3300048921 Bacteria 39638
190 Ga0496118_0001240 3300048921 Bacteria 39188
191 Ga0496118_0003783 3300048921 Bacteria 18688
192 Ga0496118_0006959 3300048921 Bacteria 12214
193 Ga0496118_0112194 3300048921 Bacteria 1805
194 Ga0496119_0000058 3300048922 Bacteria 173131
195 Ga0496119_0002062 3300048922 Bacteria 22730
196 Ga0496119_0021768 3300048922 Bacteria 4618
197 Ga0496120_0000184 3300048923 Bacteria 106643
198 Ga0496120_0002575 3300048923 Bacteria 18065
199 Ga0496120_0004451 3300048923 Bacteria 11745
200 Ga0496121_0000129 3300048924 Bacteria 168148
201 Ga0496121_0004274 3300048924 Bacteria 19386
202 Ga0496121_0005850 3300048924 Bacteria 15575
203 Ga0496121_0008240 3300048924 Bacteria 12340
204 Ga0496121_0013585 3300048924 Bacteria 8732
205 Ga0496122_0027619 3300048925 Bacteria 4844
206 Ga0496122_0060224 3300048925 Bacteria 2797
207 Ga0496123_0101332 3300048926 Bacteria 1674
208 Ga0496124_0004273 3300048927 Bacteria 16795
209 Ga0496124_0006442 3300048927 Bacteria 12791
210 Ga0496124_0144688 3300048927 Bacteria 1872
211 Ga0496125_0000499 3300048928 Bacteria 68475
212 Ga0496125_0016707 3300048928 Bacteria 7036
213 Ga0496125_0147606 3300048928 Bacteria 1622
214 Ga0496126_0013021 3300048929 Bacteria 8488
215 Ga0496126_0051945 3300048929 Bacteria 3729
216 Ga0496126_0083050 3300048929 Bacteria 2828
217 Ga0496126_0138705 3300048929 Bacteria 2095
218 Ga0495678_002472 3300049459 Bacteria 12469
219 Ga0495682_0023807 3300049460 Bacteria 2284
220 Ga0501033_0000626 3300049570 Bacteria 32770
221 Ga0501034_0015958 3300049571 Bacteria 7709
222 Ga0501036_0007940 3300049572 Bacteria 8684
223 Ga0501037_0012982 3300049573 Bacteria 6140
224 Ga0501043_0258717 3300049579 Bacteria 1339
225 Ga0501070_0019469 3300049586 Bacteria 5692
226 Ga0501080_0043068 3300049742 Bacteria 4203
227 Ga0501035_0007942 3300049822 Bacteria 9904
228 Ga0501035_0094799 3300049822 Bacteria 2624
229 Ga0501044_0015651 3300049823 Bacteria 8168
230 Ga0501044_0169167 3300049823 Bacteria 2158
231 Ga0500610_0015377 3300053079 Bacteria 3622
232 Ga0500643_000149 3300053087 Bacteria 71442
233 Ga0500555_000655 3300053103 Bacteria 13265
234 Ga0500645_019349 3300053730 Bacteria 2118
235 Ga0466962_0008323 3300061719 Bacteria 4968
236 Ga0466962_0222165 3300061719 Bacteria 925
237 2595448330 2593339238 Bacteria 4182970
238 2595451614 2593339239 Bacteria 4124669
239 2599412252 2599185169 Bacteria 5441380
240 2601525442 2600255254 Bacteria 5281859
241 2601530585 2600255255 Bacteria 5282785
242 2601617563 2600255280 Bacteria 5292309
243 2601622597 2600255281 Bacteria 5288753
244 2601644495 2600255287 Bacteria 5210468
245 2601650871 2600255288 Bacteria 5282738
246 2601655921 2600255289 Bacteria 5281907
247 2601660799 2600255290 Bacteria 5282218
248 2601664660 2600255291 Bacteria 5217298
249 2601697472 2600255298 Bacteria 5215185
250 2601702860 2600255299 Bacteria 5218662
251 2601708687 2600255300 Bacteria 5287774
252 2601713545 2600255301 Bacteria 5280532
253 2601718770 2600255302 Bacteria 5288235
254 2601722481 2600255303 Bacteria 5219315
255 2601728749 2600255304 Bacteria 5283973
256 2601733672 2600255305 Bacteria 5282329
257 2601738647 2600255306 Bacteria 5281613
258 2601743021 2600255307 Bacteria 5439064
259 2601753815 2600255309 Bacteria 5431045
260 2602020655 2600255392 Bacteria 5437392
261 2603663023 2602042052 Bacteria 5215873
262 2603667921 2602042053 Bacteria 5214361
263 2603841240 2602042103 Bacteria 5284714
264 2603846312 2602042104 Bacteria 5281639
265 2603851387 2602042105 Bacteria 5282303
266 2603856454 2602042106 Bacteria 5282744
267 2603868680 2602042109 Bacteria 5152801
268 2603874034 2602042110 Bacteria 5283285
269 2603878729 2602042111 Bacteria 5212080
270 2606051214 2603880178 Bacteria 5283018
271 2606072149 2603880184 Bacteria 5217896
272 2606148855 2603880202 Bacteria 5284684
273 2606179105 2603880211 Bacteria 5284226
274 2637227028 2636415599 Bacteria 5718434
275 2676409484 2675903046 Bacteria 5451247
276 2721028334 2718218334 Bacteria 4765486
277 2735836088 2734482264 Unclassified 5014763
278 2777021426 2775507074 Bacteria 5532402
279 2819563441 2818991440 Bacteria 4774720
280 2842915291 2842914999 Bacteria 4419378
281 2842921638 2842918807 Bacteria 4289178
282 2884339881 2884338543 Bacteria 4610696
283 2904464251 2904463128 Bacteria 4775606
284 2904516251 2904513164 Bacteria 5476410
285 2919088455 2919085039 Bacteria 4532964
286 2919112542 2919108558 Bacteria 5897419
287 2919404695 2919404418 Bacteria 4232372
288 2941472407 2941471342 Bacteria 5018624
289 2953997655 2953994433 Bacteria 4303959
290 2969084039 2969079654 Bacteria 5439582
291 2984561116 2984559226 Bacteria 5683096
292 2984599189 2984595703 Bacteria 5682994
293 Ga0209129_1003811
294 JGI24739J22299_10000590
295 JGI25157J39369_1000172
296 JGI25152J39213_1000074
297 JGI25150J39212_1000056
298 JGI25151J46595_10000178
299 JGI25153J46596_10000131
300 rootH1_10070320
301 rootH1_10070321
302 Ga0006562J51391_1002017
303 Ga0006562J51391_1002018
304 Ga0006562J51391_1039586
305 Ga0006562J51391_1039587
306 Ga0055525_1000192
307 Ga0055527_1000041
308 Ga0055535_1000193
309 Ga0055542_1000152
310 Ga0055529_1000511
311 Ga0065165_1000186
312 Ga0070658_10014261
313 Ga0070660_100071322
314 Ga0070660_100184400
315 Ga0070659_100019799
316 Ga0070659_100197858
317 Ga0070681_10073118
318 Ga0070693_100082110
319 Ga0068855_100052328
320 Ga0068857_100003286
321 Ga0068857_100084775
322 Ga0068854_100016857
323 Ga0068856_100001902
324 Ga0068856_100004668
325 Ga0068851_10038446
326 Ga0068858_100019595
327 Ga0075369_10053563
328 Ga0105251_10005384
329 Ga0105251_10086377
330 Ga0105244_10000256
331 Ga0105244_10000972
332 Ga0105250_10000378
333 Ga0105240_10018311
334 Ga0105247_10010160
335 Ga0105243_10019829
336 Ga0105237_10000307
337 Ga0105238_10020417
338 Ga0105239_10000020
339 Ga0105239_10004742
340 Ga0105239_10134504
341 Ga0157314_1000229
342 Ga0157373_10007467
343 Ga0157371_10008848
344 Ga0157370_10016285
345 Ga0157370_10151314
346 Ga0157372_10039090
347 Ga0157375_10024245
348 Ga0182006_1000077
349 Ga0182006_1045359
350 Ga0182005_1000060
351 Ga0182005_1000829
352 Ga0182005_1020611
353 Ga0209674_102011
354 Ga0209672_100005
355 Ga0209563_100023
356 Ga0209437_108155
357 Ga0209258_100006
358 Ga0207425_1000108
359 Ga0209026_1000074
360 Ga0209148_1000012
361 Ga0209148_1002015
362 Ga0209759_1000110
363 Ga0209129_1000178
364 Ga0209455_1000008
365 Ga0209025_1000012
366 Ga0209758_1000018
367 Ga0209758_1000276
368 Ga0209758_1015376
369 Ga0209758_1043606
370 Ga0209256_1003347
371 Ga0207426_1010116
372 Ga0209257_1018459
373 Ga0207696_1000066
374 Ga0207713_1000048
375 Ga0207710_10007397
376 Ga0207647_10000006
377 Ga0207647_10005801
378 Ga0207705_10017451
379 Ga0207695_10000408
380 Ga0207695_10001923
381 Ga0207695_10002881
382 Ga0207695_10016394
383 Ga0207671_10000031
384 Ga0207657_10140877
385 Ga0207657_10174602
386 Ga0207649_10060845
387 Ga0207694_10027343
388 Ga0207690_10014926
389 Ga0207706_10177153
390 Ga0207667_10000313
391 Ga0207640_10002109
392 Ga0207639_10005313
393 Ga0207678_10043416
394 Ga0207702_10000143
395 Ga0207702_10004101
396 Ga0207641_10380896
397 Ga0207674_10007552
398 Ga0207674_10057459
399 Ga0209371_1003386
400 Ga0268256_1003076
401 Ga0439436_0000013
402 Ga0439436_0041245
403 Ga0439465_0000134
404 Ga0450908_002029
405 Ga0466969_0115883
406 Ga0466969_0131585
407 Ga0466972_0000355
408 Ga0466975_0066337
409 Ga0466989_0020362
410 Ga0466982_0000004
411 Ga0466982_0000110
412 Ga0466965_0012309
413 Ga0466966_0000881
414 Ga0466966_0185384
415 Ga0466961_0005416
416 Ga0466961_0021217
417 Ga0466961_0162505
418 Ga0466971_0013688
419 Ga0466968_0003222
420 Ga0466970_0000900
421 Ga0466957_0010229
422 Ga0466957_0035675
423 Ga0466960_0012574
424 Ga0466959_0001013
425 Ga0466959_0021859
426 Ga0466959_0030510
427 Ga0466958_0027878
428 Ga0466958_0083827
429 Ga0495617_000564
430 Ga0495638_0000276
431 Ga0495638_0142028
432 Ga0495650_0038580
433 Ga0495584_0010143
434 Ga0495585_0000028
435 Ga0495585_0001902
436 Ga0495607_0000151
437 Ga0495607_0000764
438 Ga0495583_0058813
439 Ga0495606_0000894
440 Ga0495610_0003663
441 Ga0495616_0000163
442 Ga0495616_0005648
443 Ga0495620_0000187
444 Ga0495631_0000262
445 Ga0495631_0000353
446 Ga0495632_0000032
447 Ga0495632_0022559
448 Ga0495632_0063282
449 Ga0495637_0008358
450 Ga0495648_0000781
451 Ga0495648_0006688
452 Ga0495611_0000001
453 Ga0495611_0000007
454 Ga0495625_0000001
455 Ga0495670_0001435
456 Ga0495670_0007195
457 Ga0495671_0005822
458 Ga0495671_0078541
459 Ga0495589_0000371
460 Ga0495660_0000146
461 Ga0495683_0012063
462 Ga0495679_000001
463 Ga0495673_0000010
464 Ga0495673_0000414
465 Ga0495681_0058175
466 Ga0495686_0000123
467 Ga0495686_0000792
468 Ga0495686_0018377
469 Ga0495686_0022198
470 Ga0496100_0108616
471 Ga0496101_0008290
472 Ga0496101_0025808
473 Ga0496102_0599911
474 Ga0496105_0005061
475 Ga0496106_0062141
476 Ga0496116_0086900
477 Ga0496116_0119111
478 Ga0496117_0013922
479 Ga0496117_0015315
480 Ga0496117_0126408
481 Ga0496118_0001213
482 Ga0496118_0001240
483 Ga0496118_0003783
484 Ga0496118_0006959
485 Ga0496118_0112194
486 Ga0496119_0000058
487 Ga0496119_0002062
488 Ga0496119_0021768
489 Ga0496120_0000184
490 Ga0496120_0002575
491 Ga0496120_0004451
492 Ga0496121_0000129
493 Ga0496121_0004274
494 Ga0496121_0005850
495 Ga0496121_0008240
496 Ga0496121_0013585
497 Ga0496122_0027619
498 Ga0496122_0060224
499 Ga0496123_0101332
500 Ga0496124_0004273
501 Ga0496124_0006442
502 Ga0496124_0144688
503 Ga0496125_0000499
504 Ga0496125_0016707
505 Ga0496125_0147606
506 Ga0496126_0013021
507 Ga0496126_0051945
508 Ga0496126_0083050
509 Ga0496126_0138705
510 Ga0495678_002472
511 Ga0495682_0023807
512 Ga0501033_0000626
513 Ga0501034_0015958
514 Ga0501036_0007940
515 Ga0501037_0012982
516 Ga0501043_0258717
517 Ga0501070_0019469
518 Ga0501080_0043068
519 Ga0501035_0007942
520 Ga0501035_0094799
521 Ga0501044_0015651
522 Ga0501044_0169167
523 Ga0500610_0015377
524 Ga0500643_000149
525 Ga0500555_000655
526 Ga0500645_019349
527 Ga0466962_0008323
528 Ga0466962_0222165
529 2595448330
530 2595451614
531 2599412252
532 2601525442
533 2601530585
534 2601617563
535 2601622597
536 2601644495
537 2601650871
538 2601655921
539 2601660799
540 2601664660
541 2601697472
542 2601702860
543 2601708687
544 2601713545
545 2601718770
546 2601722481
547 2601728749
548 2601733672
549 2601738647
550 2601743021
551 2601753815
552 2602020655
553 2603663023
554 2603667921
555 2603841240
556 2603846312
557 2603851387
558 2603856454
559 2603868680
560 2603874034
561 2603878729
562 2606051214
563 2606072149
564 2606148855
565 2606179105
566 2637227028
567 2676409484
568 2721028334
569 2735836088
570 2777021426
571 2819563441
572 2842915291
573 2842921638
574 2884339881
575 2904464251
576 2904516251
577 2919088455
578 2919112542
579 2919404695
580 2941472407
581 2953997655
582 2969084039
583 2984561116
584 2984599189

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00749

tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

62

300

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nzj-assembly1.cif.gz_A crystal structure and activity studies of escherichia coli yadb orf 0.8994 1 284
1nzj-assembly1.cif.gz_A crystal structure and activity studies of escherichia coli yadb orf 0.8967 1 284
4a91-assembly1.cif.gz_A crystal structure of the glutamyl-queuosine trnaasp synthetase from e. coli complexed with l-glutamate 0.896 1 285
4a91-assembly1.cif.gz_A crystal structure of the glutamyl-queuosine trnaasp synthetase from e. coli complexed with l-glutamate 0.887 1 285
2cv1-assembly1.cif.gz_A glutamyl-trna synthetase from thermus thermophilus in complex with trna(glu), atp, and an analog of l-glutamate: a quaternary complex 0.8566 3 283
ID Description Score Start End Superfamily
1nzjA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9867 1 75 3.40.50.620
3akzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9417 3 216 3.40.50.620
af_P27305_7_302_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9356 1 285 3.40.50.620
af_P27305_7_302_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9261 1 285 3.40.50.620
3akzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9043 3 216 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A7X0ADY3-F1-model_v4 Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-) 0.9938 1 287 GO:0004818
GO:0005524
GO:0005829
GO:0006400
GO:0006424
GO:0008270
AF-A0A7X0ADY3-F1-model_v4 Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-) 0.9903 1 287 GO:0004818
GO:0005524
GO:0005829
GO:0006400
GO:0006424
GO:0008270
AF-A0A1M3QIL0-F1-model_v4 Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-) 0.9743 1 287 GO:0004818
GO:0005524
GO:0005829
GO:0006400
GO:0006424
GO:0008270
AF-T0YVJ9-F1-model_v4 Glutamyl-Q tRNA(Asp) synthetase 0.9725 1 211 GO:0004818
GO:0005524
GO:0005829
GO:0006400
GO:0006424
GO:0008270
AF-A0A1M3QIL0-F1-model_v4 Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-) 0.971 1 287 GO:0004818
GO:0005524
GO:0005829
GO:0006400
GO:0006424
GO:0008270

Map