F391963

General Info

Members Datasets Scaffolds Average Seq Length
294 171 589 451

Family's Representative Sequence

Representative Sequence 3300005535|Ga0070684_100187836|Ga0070684_1001878361
Length 488
Sequence MKKQSSSKERGPAQVMRLSRKSLSWLMLLLPVSLTLMQGCKKMDVSPDKISSQNSENATISGSYDLKLVADNFVSPLSVVDPADGTQRLFVVDQVGKIWIIDPDGTTLSNPFLDISSELVTLDPNYDERGLLSLAFHPDFKSNGKFYVFYTAPPRPGGPEPGASWDNQTRISEFTVSAGNPNRADISSERIIFKANHPQSNHNGGTIAFGPEDGYLYISIGDGGFADDNAPGHVDDWYTKNAGGNGQDITHNLLGNVLRIDVNTTSADKNYGIPSDNPFVGRAGKDEIWAFGLRNPYRFSFDMGGQHWLYLGDAGQSLYEEIDVITKGGNYGWNVKEGTHCFNTDNDLKERKACPVEDPQGNPLIDPVIEVKNTANPEGGGLMVTIVGGNVYRGTAVPFLYGRYIFGGYSASFDGPQGKLYIAKKSSIGLWPFEELPLKSFPKDLNQWLKGFGQDRNGELYVVASKQAGPTGNSGKIWKLVFVKDGSQ

Samples

Sample ID Description Type Environment
1 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003579 Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
7 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
8 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
9 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
10 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
15 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
16 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
17 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
18 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
22 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
23 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
24 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
25 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
28 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
29 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
30 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
50 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
66 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
67 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
70 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
71 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
75 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
76 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
77 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
78 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
79 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
80 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
81 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
82 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
114 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
118 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
119 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
120 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
121 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
122 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
123 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
124 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
125 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
126 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
127 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
128 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
129 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
130 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
131 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
132 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
133 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
134 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
135 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
136 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
137 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
138 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
139 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
140 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
141 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
142 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
143 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
144 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
145 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
146 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
147 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
148 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
149 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
150 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
155 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
156 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
160 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
161 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
162 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
163 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
164 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
165 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
166 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
167 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
168 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
169 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
170 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
171 2738541278 Niastella sp. CF465 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.56
Metatranscriptomes 5.1
Isolates 0.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.38
Nodule 0
Rhizoplane 0
Rhizosphere 91.16
Stem 0
Stem Tuber 0
Unclassified 12.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070684_100187836 3300005535 Unclassified 1880
2 rootH1_10029282 3300003316 Unclassified 4982
3 rootH1_10033268 3300003316 Bacteria 4713
4 rootH1_10033268 3300003323 Bacteria 5626
5 rootH1_10054280 3300003316 Bacteria 2231
6 rootH1_10144491 3300003316 Bacteria 4591
7 rootH2_10052210 3300003320 Bacteria 35441
8 rootH2_10262953 3300003320 Unclassified 3006
9 rootL2_10076100 3300003322 Bacteria 3737
10 rootL2_10085013 3300003322 Unclassified 1653
11 rootL2_10133694 3300003322 Bacteria 7180
12 rootL2_10208189 3300003322 Bacteria 4960
13 rootH1_10085150 3300003323 Archaea 2015
14 Ga0007429J51699_1031298 3300003579 Unclassified 1619
15 Ga0058863_10147911 3300004799 Bacteria 1704
16 Ga0058863_11632147 3300004799 Unclassified 1668
17 Ga0058863_11643036 3300004799 Unclassified 1665
18 Ga0058861_10065748 3300004800 Archaea 1760
19 Ga0058861_11898672 3300004800 Unclassified 1784
20 Ga0058862_10055432 3300004803 Archaea 1725
21 Ga0058862_12680950 3300004803 Unclassified 1738
22 Ga0065712_10002359 3300005290 Bacteria 5552
23 Ga0070658_10084894 3300005327 Bacteria 2604
24 Ga0070676_10008682 3300005328 Bacteria 5480
25 Ga0070683_100024733 3300005329 Archaea 5383
26 Ga0070690_100003845 3300005330 Bacteria 8269
27 Ga0070690_100126649 3300005330 Bacteria 1720
28 Ga0068869_100050069 3300005334 Bacteria 3027
29 Ga0068869_100202164 3300005334 Archaea 1567
30 Ga0070666_10004715 3300005335 Bacteria 8337
31 Ga0070666_10042913 3300005335 Archaea 3027
32 Ga0070680_100002100 3300005336 Bacteria 14714
33 Ga0070680_100023337 3300005336 Bacteria 4934
34 Ga0070682_100033293 3300005337 Archaea 3130
35 Ga0068868_100003085 3300005338 Bacteria 11598
36 Ga0070660_100016431 3300005339 Bacteria 5370
37 Ga0070687_100007003 3300005343 Bacteria 4664
38 Ga0070661_100002806 3300005344 Bacteria 11959
39 Ga0070668_100005120 3300005347 Bacteria 9715
40 Ga0070669_100005079 3300005353 Bacteria 9513
41 Ga0070669_100015956 3300005353 Bacteria 5358
42 Ga0070675_100040419 3300005354 Bacteria 3807
43 Ga0070673_100003417 3300005364 Bacteria 9887
44 Ga0070673_100009039 3300005364 Bacteria 6671
45 Ga0070673_100018095 3300005364 Bacteria 5028
46 Ga0070688_100040499 3300005365 Archaea 2855
47 Ga0070688_100049222 3300005365 Archaea 2622
48 Ga0070659_100029528 3300005366 Bacteria 4238
49 Ga0070667_100113549 3300005367 Bacteria 2351
50 Ga0070701_10014821 3300005438 Unclassified 3583
51 Ga0070662_100001982 3300005457 Bacteria 12555
52 Ga0070662_100001997 3300005457 Bacteria 12509
53 Ga0068867_100020984 3300005459 Bacteria 4659
54 Ga0068867_100072130 3300005459 Unclassified 2584
55 Ga0070679_100003953 3300005530 Bacteria 13645
56 Ga0070679_100028388 3300005530 Archaea 5516
57 Ga0070679_100040362 3300005530 Bacteria 4643
58 Ga0070684_100013816 3300005535 Bacteria 6520
59 Ga0068853_100000744 3300005539 Bacteria 22614
60 Ga0068853_100002260 3300005539 Bacteria 14395
61 Ga0068853_100056536 3300005539 Bacteria 3384
62 Ga0070672_100066162 3300005543 Archaea 2861
63 Ga0070686_100004137 3300005544 Bacteria 7983
64 Ga0070693_100014359 3300005547 Bacteria 4057
65 Ga0070665_100000006 3300005548 Bacteria 718034
66 Ga0068855_100016106 3300005563 Bacteria 8989
67 Ga0068855_100050779 3300005563 Bacteria 4886
68 Ga0068855_100211638 3300005563 Bacteria 2178
69 Ga0070664_100002468 3300005564 Bacteria 14901
70 Ga0068857_100009351 3300005577 Bacteria 8509
71 Ga0068857_100016057 3300005577 Bacteria 6560
72 Ga0068854_100007791 3300005578 Bacteria 6850
73 Ga0068854_100140802 3300005578 Unclassified 1851
74 Ga0068854_100163634 3300005578 Bacteria 1725
75 Ga0068856_100002816 3300005614 Bacteria 17807
76 Ga0068856_100036072 3300005614 Unclassified 4848
77 Ga0068856_100052031 3300005614 Bacteria 4038
78 Ga0068852_100002667 3300005616 Bacteria 12335
79 Ga0068852_100006410 3300005616 Bacteria 8502
80 Ga0068852_100025902 3300005616 Bacteria 4760
81 Ga0068852_100041270 3300005616 Archaea 3899
82 Ga0068859_100057760 3300005617 Unclassified 3908
83 Ga0068859_100386679 3300005617 Archaea 1495
84 Ga0068866_10006906 3300005718 Bacteria 4741
85 Ga0068860_100000005 3300005843 Bacteria 472349
86 Ga0068860_100037143 3300005843 Bacteria 4662
87 Ga0068862_100052644 3300005844 Unclassified 3483
88 Ga0081538_10002819 3300005981 Bacteria 16630
89 Ga0081538_10020759 3300005981 Bacteria 4822
90 Ga0081538_10029292 3300005981 Unclassified 3765
91 Ga0081538_10034643 3300005981 Archaea 3332
92 Ga0081538_10043520 3300005981 Bacteria 2817
93 Ga0081539_10023956 3300005985 Unclassified 3979
94 Ga0097621_100016436 3300006237 Bacteria 5595
95 Ga0097621_100029725 3300006237 Unclassified 4319
96 Ga0075428_100131369 3300006844 Bacteria 2723
97 Ga0075430_100014559 3300006846 Bacteria 6700
98 Ga0075430_100067833 3300006846 Bacteria 2994
99 Ga0075430_100194345 3300006846 Bacteria 1686
100 Ga0075431_100027351 3300006847 Bacteria 5850
101 Ga0075431_100078689 3300006847 Bacteria 3403
102 Ga0068865_100005289 3300006881 Bacteria 7809
103 Ga0097620_100057760 3300006931 Unclassified 3908
104 Ga0097620_100386696 3300006931 Archaea 1495
105 Ga0105240_10001071 3300009093 Bacteria 48359
106 Ga0105240_10004371 3300009093 Bacteria 21580
107 Ga0105240_10006024 3300009093 Bacteria 17926
108 Ga0105240_10010072 3300009093 Bacteria 13307
109 Ga0105240_10037866 3300009093 Bacteria 6194
110 Ga0105240_10086237 3300009093 Bacteria 3845
111 Ga0111539_10003951 3300009094 Bacteria 19471
112 Ga0111539_10042477 3300009094 Bacteria 5459
113 Ga0111539_10061397 3300009094 Bacteria 4453
114 Ga0111539_10255576 3300009094 Bacteria 2040
115 Ga0114129_10098383 3300009147 Bacteria 4049
116 Ga0114129_10159469 3300009147 Bacteria 3083
117 Ga0114129_10380601 3300009147 Archaea 1864
118 Ga0105241_10000646 3300009174 Bacteria 26122
119 Ga0105237_10000365 3300009545 Bacteria 64152
120 Ga0105237_10001950 3300009545 Bacteria 26283
121 Ga0105237_10004501 3300009545 Bacteria 16106
122 Ga0105237_10068759 3300009545 Unclassified 3536
123 Ga0105237_10172556 3300009545 Archaea 2163
124 Ga0105238_10000007 3300009551 Bacteria 309725
125 Ga0105238_10007497 3300009551 Bacteria 10930
126 Ga0105238_10013298 3300009551 Bacteria 8305
127 Ga0105238_10044328 3300009551 Bacteria 4497
128 Ga0105238_10074034 3300009551 Archaea 3399
129 Ga0105238_10157798 3300009551 Archaea 2244
130 Ga0105249_10015487 3300009553 Bacteria 6748
131 Ga0105249_10207552 3300009553 Archaea 1920
132 Ga0105239_10001872 3300010375 Bacteria 27549
133 Ga0105239_10002109 3300010375 Bacteria 25672
134 Ga0105239_10011235 3300010375 Bacteria 9992
135 Ga0157373_10002156 3300013100 Bacteria 14894
136 Ga0157373_10011135 3300013100 Bacteria 6618
137 Ga0157371_10002933 3300013102 Bacteria 15909
138 Ga0157371_10007039 3300013102 Bacteria 9152
139 Ga0157371_10072021 3300013102 Unclassified 2447
140 Ga0157370_10012675 3300013104 Bacteria 8729
141 Ga0157370_10057157 3300013104 Bacteria 3711
142 Ga0157369_10002893 3300013105 Bacteria 20510
143 Ga0157374_10180581 3300013296 Bacteria 2061
144 Ga0157374_10272650 3300013296 Unclassified 1669
145 Ga0157378_10011455 3300013297 Bacteria 7761
146 Ga0157378_10047346 3300013297 Bacteria 3823
147 Ga0163162_10044678 3300013306 Bacteria 4438
148 Ga0157372_10026492 3300013307 Bacteria 6309
149 Ga0157372_10045207 3300013307 Unclassified 4883
150 Ga0157375_10030796 3300013308 Bacteria 5064
151 Ga0157380_10000293 3300014326 Bacteria 30049
152 Ga0157380_10016253 3300014326 Bacteria 5483
153 Ga0157377_10008551 3300014745 Bacteria 4996
154 Ga0157376_10160213 3300014969 Unclassified 2039
155 Ga0206349_1624647 3300020075 Archaea 1896
156 Ga0206355_1005476 3300020076 Archaea 1927
157 Ga0206352_10255156 3300020078 Archaea 2808
158 Ga0206353_10463865 3300020082 Archaea 1855
159 Ga0224712_10002386 3300022467 Archaea 4624
160 Ga0224712_10038877 3300022467 Archaea 1780
161 Ga0207642_10030445 3300025899 Archaea 2248
162 Ga0207680_10007434 3300025903 Bacteria 5340
163 Ga0207680_10034508 3300025903 Bacteria 2895
164 Ga0207647_10012894 3300025904 Bacteria 5808
165 Ga0207645_10013394 3300025907 Bacteria 5526
166 Ga0207654_10001786 3300025911 Bacteria 11169
167 Ga0207707_10045725 3300025912 Unclassified 3815
168 Ga0207695_10003178 3300025913 Bacteria 23405
169 Ga0207695_10004785 3300025913 Bacteria 18316
170 Ga0207695_10013778 3300025913 Bacteria 9621
171 Ga0207695_10045617 3300025913 Bacteria 4651
172 Ga0207671_10004162 3300025914 Bacteria 13982
173 Ga0207671_10004551 3300025914 Bacteria 13177
174 Ga0207671_10010369 3300025914 Bacteria 7696
175 Ga0207671_10014737 3300025914 Bacteria 6165
176 Ga0207671_10081012 3300025914 Unclassified 2434
177 Ga0207660_10032219 3300025917 Bacteria 3617
178 Ga0207660_10033914 3300025917 Archaea 3534
179 Ga0207662_10019515 3300025918 Bacteria 3860
180 Ga0207657_10002499 3300025919 Bacteria 19882
181 Ga0207657_10141509 3300025919 Bacteria 1965
182 Ga0207652_10000648 3300025921 Bacteria 34315
183 Ga0207652_10110078 3300025921 Bacteria 2442
184 Ga0207681_10000411 3300025923 Bacteria 29888
185 Ga0207694_10000007 3300025924 Bacteria 595422
186 Ga0207694_10013157 3300025924 Bacteria 6230
187 Ga0207694_10050721 3300025924 Bacteria 3215
188 Ga0207694_10077193 3300025924 Bacteria 2610
189 Ga0207659_10167357 3300025926 Bacteria 1731
190 Ga0207706_10001406 3300025933 Bacteria 24080
191 Ga0207706_10002213 3300025933 Bacteria 18976
192 Ga0207706_10025111 3300025933 Bacteria 5342
193 Ga0207670_10029961 3300025936 Archaea 3472
194 Ga0207704_10005915 3300025938 Bacteria 5666
195 Ga0207689_10176889 3300025942 Archaea 1760
196 Ga0207679_10022326 3300025945 Bacteria 4308
197 Ga0207667_10000378 3300025949 Bacteria 60324
198 Ga0207667_10070514 3300025949 Bacteria 3637
199 Ga0207667_10160366 3300025949 Archaea 2313
200 Ga0207651_10003544 3300025960 Archaea 7670
201 Ga0207651_10046446 3300025960 Bacteria 2920
202 Ga0207712_10105460 3300025961 Archaea 2103
203 Ga0207677_10013534 3300026023 Bacteria 4732
204 Ga0207708_10014948 3300026075 Bacteria 5814
205 Ga0207708_10090891 3300026075 Bacteria 2354
206 Ga0207702_10059888 3300026078 Bacteria 3245
207 Ga0207702_10062819 3300026078 Bacteria 3173
208 Ga0207702_10073949 3300026078 Unclassified 2940
209 Ga0207648_10010134 3300026089 Bacteria 8961
210 Ga0207648_10103147 3300026089 Unclassified 2501
211 Ga0207674_10002578 3300026116 Bacteria 22818
212 Ga0207674_10039445 3300026116 Bacteria 4894
213 Ga0207675_100012471 3300026118 Bacteria 7939
214 Ga0207675_100016207 3300026118 Bacteria 6956
215 Ga0207683_10217147 3300026121 Archaea 1742
216 Ga0207698_10008223 3300026142 Bacteria 6582
217 Ga0207698_10011736 3300026142 Bacteria 5694
218 Ga0207698_10046640 3300026142 Unclassified 3274
219 Ga0207698_10109776 3300026142 Bacteria 2309
220 Ga0207428_10010829 3300027907 Bacteria 8123
221 Ga0207428_10052054 3300027907 Bacteria 3271
222 Ga0207428_10056290 3300027907 Bacteria 3125
223 Ga0268266_10000010 3300028379 Bacteria 1030233
224 Ga0268265_10069893 3300028380 Unclassified 2728
225 Ga0268264_10000012 3300028381 Bacteria 521740
226 Ga0268264_10007664 3300028381 Bacteria 8997
227 Ga0307517_10001115 3300028786 Bacteria 45308
228 Ga0265327_10000101 3300031251 Bacteria 188671
229 Ga0307509_10050043 3300031507 Bacteria 4476
230 Ga0307509_10126503 3300031507 Bacteria 2520
231 Ga0307508_10000111 3300031616 Bacteria 96733
232 Ga0307508_10112410 3300031616 Bacteria 2324
233 Ga0307516_10000733 3300031730 Bacteria 44679
234 Ga0307405_10085714 3300031731 Bacteria 2071
235 Ga0307410_10199814 3300031852 Bacteria 1525
236 Ga0307412_10037912 3300031911 Bacteria 3099
237 Ga0307409_100027183 3300031995 Bacteria 4050
238 Ga0307409_100056323 3300031995 Bacteria 3039
239 Ga0307416_100028906 3300032002 Bacteria 4131
240 Ga0307414_10122954 3300032004 Bacteria 1999
241 Ga0307510_10012836 3300033180 Bacteria 9943
242 Ga0373955_0147065 3300035172 Bacteria 1385
243 Ga0395899_0134679 3300037312 Unclassified 1762
244 Ga0395900_0048328 3300037418 Unclassified 4383
245 Ga0395905_0009671 3300037471 Bacteria 9412
246 Ga0395905_0272771 3300037471 Unclassified 1578
247 Ga0439457_005461 3300042014 Unclassified 3197
248 Ga0466972_0010416 3300044658 Bacteria 4668
249 Ga0466961_0039449 3300044693 Archaea 3027
250 Ga0466971_0031675 3300044719 Archaea 2368
251 Ga0466968_0027864 3300044735 Bacteria 2326
252 Ga0466957_0009291 3300044842 Bacteria 5610
253 Ga0466967_0063491 3300045976 Bacteria 3282
254 Ga0495580_0134280 3300046472 Bacteria 1716
255 Ga0495606_0006615 3300046507 Bacteria 10639
256 Ga0495648_0017722 3300046524 Bacteria 5079
257 Ga0495668_0004570 3300046616 Bacteria 9736
258 Ga0495611_0000093 3300046648 Bacteria 61517
259 Ga0495611_0007079 3300046648 Bacteria 4763
260 Ga0495625_0045593 3300046660 Bacteria 3168
261 Ga0495649_0029906 3300046694 Bacteria 3010
262 Ga0495674_0122714 3300047319 Bacteria 2194
263 Ga0495687_000009 3300047443 Bacteria 419317
264 Ga0495686_0000046 3300047472 Bacteria 281963
265 Ga0501036_0125377 3300049572 Bacteria 2169
266 Ga0501040_0000170 3300049576 Archaea 36778
267 Ga0501041_0119117 3300049577 Bacteria 1640
268 Ga0501048_0058271 3300049582 Bacteria 2738
269 Ga0501225_0000308 3300049705 Bacteria 15285
270 Ga0501079_0127430 3300049741 Bacteria 1980
271 Ga0501035_0103405 3300049822 Bacteria 2499
272 Ga0501045_0063116 3300049824 Bacteria 2718
273 nmdc:mga05p37_24435_c1 3300050507 Bacteria 7344
274 nmdc:mga05p37_8646_c1 3300050507 Bacteria 4075
275 nmdc:mga0qj67_13930_c1 3300050509 Bacteria 6070
276 nmdc:mga0qj67_189720_c1 3300050509 Bacteria 1670
277 nmdc:mga0qj67_203237_c1 3300050509 Unclassified 1609
278 nmdc:mga0qj67_6985_c1 3300050509 Bacteria 8315
279 nmdc:mga06r32_154454_c1 3300050510 Unclassified 2275
280 nmdc:mga06r32_244555_c1 3300050510 Bacteria 1781
281 nmdc:mga06r32_38891_c1 3300050510 Bacteria 4510
282 nmdc:mga08y16_15046_c1 3300050511 Bacteria 8136
283 nmdc:mga08y16_22433_c1 3300050511 Bacteria 6663
284 nmdc:mga08y16_3648_c1 3300050511 Bacteria 16007
285 Ga0500583_0000394 3300053092 Bacteria 14021
286 Ga0500583_0002735 3300053092 Bacteria 5380
287 Ga0500642_0005482 3300053130 Unclassified 4096
288 Ga0500568_0013643 3300053139 Unclassified 3697
289 Ga0500588_0016370 3300053146 Bacteria 1918
290 Ga0500616_0004230 3300053153 Bacteria 10333
291 Ga0500622_0002688 3300053156 Bacteria 12598
292 Ga0501084_0152355 3300054114 Archaea 1949
293 Ga0587083_0004892 3300059505 Archaea 1897
294 Ga0466962_0010410 3300061719 Bacteria 4470
295 2738728430 2738541278 Bacteria 9755573
296 Ga0070684_100187836
297 rootH1_10029282
298 rootH1_10033268
299 rootH1_10054280
300 rootH1_10144491
301 rootH2_10052210
302 rootH2_10262953
303 rootL2_10076100
304 rootL2_10085013
305 rootL2_10133694
306 rootL2_10208189
307 rootH1_10085150
308 Ga0007429J51699_1031298
309 Ga0058863_10147911
310 Ga0058863_11632147
311 Ga0058863_11643036
312 Ga0058861_10065748
313 Ga0058861_11898672
314 Ga0058862_10055432
315 Ga0058862_12680950
316 Ga0065712_10002359
317 Ga0070658_10084894
318 Ga0070676_10008682
319 Ga0070683_100024733
320 Ga0070690_100003845
321 Ga0070690_100126649
322 Ga0068869_100050069
323 Ga0068869_100202164
324 Ga0070666_10004715
325 Ga0070666_10042913
326 Ga0070680_100002100
327 Ga0070680_100023337
328 Ga0070682_100033293
329 Ga0068868_100003085
330 Ga0070660_100016431
331 Ga0070687_100007003
332 Ga0070661_100002806
333 Ga0070668_100005120
334 Ga0070669_100005079
335 Ga0070669_100015956
336 Ga0070675_100040419
337 Ga0070673_100003417
338 Ga0070673_100009039
339 Ga0070673_100018095
340 Ga0070688_100040499
341 Ga0070688_100049222
342 Ga0070659_100029528
343 Ga0070667_100113549
344 Ga0070701_10014821
345 Ga0070662_100001982
346 Ga0070662_100001997
347 Ga0068867_100020984
348 Ga0068867_100072130
349 Ga0070679_100003953
350 Ga0070679_100028388
351 Ga0070679_100040362
352 Ga0070684_100013816
353 Ga0068853_100000744
354 Ga0068853_100002260
355 Ga0068853_100056536
356 Ga0070672_100066162
357 Ga0070686_100004137
358 Ga0070693_100014359
359 Ga0070665_100000006
360 Ga0068855_100016106
361 Ga0068855_100050779
362 Ga0068855_100211638
363 Ga0070664_100002468
364 Ga0068857_100009351
365 Ga0068857_100016057
366 Ga0068854_100007791
367 Ga0068854_100140802
368 Ga0068854_100163634
369 Ga0068856_100002816
370 Ga0068856_100036072
371 Ga0068856_100052031
372 Ga0068852_100002667
373 Ga0068852_100006410
374 Ga0068852_100025902
375 Ga0068852_100041270
376 Ga0068859_100057760
377 Ga0068859_100386679
378 Ga0068866_10006906
379 Ga0068860_100000005
380 Ga0068860_100037143
381 Ga0068862_100052644
382 Ga0081538_10002819
383 Ga0081538_10020759
384 Ga0081538_10029292
385 Ga0081538_10034643
386 Ga0081538_10043520
387 Ga0081539_10023956
388 Ga0097621_100016436
389 Ga0097621_100029725
390 Ga0075428_100131369
391 Ga0075430_100014559
392 Ga0075430_100067833
393 Ga0075430_100194345
394 Ga0075431_100027351
395 Ga0075431_100078689
396 Ga0068865_100005289
397 Ga0097620_100057760
398 Ga0097620_100386696
399 Ga0105240_10001071
400 Ga0105240_10004371
401 Ga0105240_10006024
402 Ga0105240_10010072
403 Ga0105240_10037866
404 Ga0105240_10086237
405 Ga0111539_10003951
406 Ga0111539_10042477
407 Ga0111539_10061397
408 Ga0111539_10255576
409 Ga0114129_10098383
410 Ga0114129_10159469
411 Ga0114129_10380601
412 Ga0105241_10000646
413 Ga0105237_10000365
414 Ga0105237_10001950
415 Ga0105237_10004501
416 Ga0105237_10068759
417 Ga0105237_10172556
418 Ga0105238_10000007
419 Ga0105238_10007497
420 Ga0105238_10013298
421 Ga0105238_10044328
422 Ga0105238_10074034
423 Ga0105238_10157798
424 Ga0105249_10015487
425 Ga0105249_10207552
426 Ga0105239_10001872
427 Ga0105239_10002109
428 Ga0105239_10011235
429 Ga0157373_10002156
430 Ga0157373_10011135
431 Ga0157371_10002933
432 Ga0157371_10007039
433 Ga0157371_10072021
434 Ga0157370_10012675
435 Ga0157370_10057157
436 Ga0157369_10002893
437 Ga0157374_10180581
438 Ga0157374_10272650
439 Ga0157378_10011455
440 Ga0157378_10047346
441 Ga0163162_10044678
442 Ga0157372_10026492
443 Ga0157372_10045207
444 Ga0157375_10030796
445 Ga0157380_10000293
446 Ga0157380_10016253
447 Ga0157377_10008551
448 Ga0157376_10160213
449 Ga0206349_1624647
450 Ga0206355_1005476
451 Ga0206352_10255156
452 Ga0206353_10463865
453 Ga0224712_10002386
454 Ga0224712_10038877
455 Ga0207642_10030445
456 Ga0207680_10007434
457 Ga0207680_10034508
458 Ga0207647_10012894
459 Ga0207645_10013394
460 Ga0207654_10001786
461 Ga0207707_10045725
462 Ga0207695_10003178
463 Ga0207695_10004785
464 Ga0207695_10013778
465 Ga0207695_10045617
466 Ga0207671_10004162
467 Ga0207671_10004551
468 Ga0207671_10010369
469 Ga0207671_10014737
470 Ga0207671_10081012
471 Ga0207660_10032219
472 Ga0207660_10033914
473 Ga0207662_10019515
474 Ga0207657_10002499
475 Ga0207657_10141509
476 Ga0207652_10000648
477 Ga0207652_10110078
478 Ga0207681_10000411
479 Ga0207694_10000007
480 Ga0207694_10013157
481 Ga0207694_10050721
482 Ga0207694_10077193
483 Ga0207659_10167357
484 Ga0207706_10001406
485 Ga0207706_10002213
486 Ga0207706_10025111
487 Ga0207670_10029961
488 Ga0207704_10005915
489 Ga0207689_10176889
490 Ga0207679_10022326
491 Ga0207667_10000378
492 Ga0207667_10070514
493 Ga0207667_10160366
494 Ga0207651_10003544
495 Ga0207651_10046446
496 Ga0207712_10105460
497 Ga0207677_10013534
498 Ga0207708_10014948
499 Ga0207708_10090891
500 Ga0207702_10059888
501 Ga0207702_10062819
502 Ga0207702_10073949
503 Ga0207648_10010134
504 Ga0207648_10103147
505 Ga0207674_10002578
506 Ga0207674_10039445
507 Ga0207675_100012471
508 Ga0207675_100016207
509 Ga0207683_10217147
510 Ga0207698_10008223
511 Ga0207698_10011736
512 Ga0207698_10046640
513 Ga0207698_10109776
514 Ga0207428_10010829
515 Ga0207428_10052054
516 Ga0207428_10056290
517 Ga0268266_10000010
518 Ga0268265_10069893
519 Ga0268264_10000012
520 Ga0268264_10007664
521 Ga0307517_10001115
522 Ga0265327_10000101
523 Ga0307509_10050043
524 Ga0307509_10126503
525 Ga0307508_10000111
526 Ga0307508_10112410
527 Ga0307516_10000733
528 Ga0307405_10085714
529 Ga0307410_10199814
530 Ga0307412_10037912
531 Ga0307409_100027183
532 Ga0307409_100056323
533 Ga0307416_100028906
534 Ga0307414_10122954
535 Ga0307510_10012836
536 Ga0373955_0147065
537 Ga0395899_0134679
538 Ga0395900_0048328
539 Ga0395905_0009671
540 Ga0395905_0272771
541 Ga0439457_005461
542 Ga0466972_0010416
543 Ga0466961_0039449
544 Ga0466971_0031675
545 Ga0466968_0027864
546 Ga0466957_0009291
547 Ga0466967_0063491
548 Ga0495580_0134280
549 Ga0495606_0006615
550 Ga0495648_0017722
551 Ga0495668_0004570
552 Ga0495611_0000093
553 Ga0495611_0007079
554 Ga0495625_0045593
555 Ga0495649_0029906
556 Ga0495674_0122714
557 Ga0495687_000009
558 Ga0495686_0000046
559 Ga0501036_0125377
560 Ga0501040_0000170
561 Ga0501041_0119117
562 Ga0501048_0058271
563 Ga0501225_0000308
564 Ga0501079_0127430
565 Ga0501035_0103405
566 Ga0501045_0063116
567 nmdc:mga05p37_24435_c1
568 nmdc:mga05p37_8646_c1
569 nmdc:mga0qj67_13930_c1
570 nmdc:mga0qj67_189720_c1
571 nmdc:mga0qj67_203237_c1
572 nmdc:mga0qj67_6985_c1
573 nmdc:mga06r32_154454_c1
574 nmdc:mga06r32_244555_c1
575 nmdc:mga06r32_38891_c1
576 nmdc:mga08y16_15046_c1
577 nmdc:mga08y16_22433_c1
578 nmdc:mga08y16_3648_c1
579 Ga0500583_0000394
580 Ga0500583_0002735
581 Ga0500642_0005482
582 Ga0500568_0013643
583 Ga0500588_0016370
584 Ga0500616_0004230
585 Ga0500622_0002688
586 Ga0501084_0152355
587 Ga0587083_0004892
588 Ga0466962_0010410
589 2738728430

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07995

GSDH

Glucose / Sorbosone dehydrogenase

73

410

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
7pgm-assembly1.cif.gz_B hhip-c in complex with heparin 0.844 33 445
7cgz-assembly1.cif.gz_B glucose dehydrogenase 0.8408 36 448
7pgn-assembly1.cif.gz_A hhp-c in complex with glycosaminoglycan mimic sos 0.8381 33 445
2ism-assembly1.cif.gz_A crystal structure of the putative oxidoreductase (glucose dehydrogenase) (ttha0570) from thermus theromophilus hb8 0.8363 34 445
7pgm-assembly1.cif.gz_C hhip-c in complex with heparin 0.8362 32 445
ID Description Score Start End Superfamily
af_Q14DK5_187_578_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.8782 36 443 2.120.10.30
af_Q14DK5_187_578_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.8631 36 443 2.120.10.30
3a9gA00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.83 33 446 2.120.10.30
3a9gA00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.8164 33 446 2.120.10.30
2ismB00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.8148 34 445 2.120.10.30
ID Description Score Start End GO Terms
AF-A0A4Q5WNP0-F1-model_v4 Glucose/Sorbosone dehydrogenase domain-containing protein 0.9867 252 447
AF-A0A4S8I1Z2-F1-model_v4 PQQ-dependent sugar dehydrogenase 0.98 32 448
AF-A0A5B8UGV2-F1-model_v4 PQQ-dependent sugar dehydrogenase 0.9769 229 448
AF-A0A5N1J668-F1-model_v4 PQQ-dependent sugar dehydrogenase 0.9766 40 445
AF-A0A4S8I1Z2-F1-model_v4 PQQ-dependent sugar dehydrogenase 0.9731 32 448

Map