F394072

General Info

Members Datasets Scaffolds Average Seq Length
298 203 596 344

Family's Representative Sequence

Representative Sequence 3300005337|Ga0070682_100085796|Ga0070682_1000857962
Length 373
Sequence MVSDRGLEVLRVIVQDYVASREPVGSKTIVERHSFGVSAATIRNDMAQLEEEELIAAPHTSSGRVPTDKGYRVFVDRLTEVRPLTAVQRQAIETFLGQAVDLDDVLTRTTRLLSQLTNQVALAQYPSFGSARVRHIEVVALAASRIMTVLITDTGRVDQRLLEVPGAAADSPAMLEFLGELRSRLNAELGGKALADVAEPLRTLAASFPREHALLVSAVAGTLAEQVAANRQDRLVMAGAANLARTESDFSGSIYPVLEAIEEQVILIKLFGEMEIESDGVSVSIGHENQGFGPGAQGLSETSVLASGYTASGGSIARVGVLGPTRMDYSNNMAAVRATARYLTRLLSDGTADDRRVVDEAAGGAPDDKHKEP

Samples

Sample ID Description Type Environment
1 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
7 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
8 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
9 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
10 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
11 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
12 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
13 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
41 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
58 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
59 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
62 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
89 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
90 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
91 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
92 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
99 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
100 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
101 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
102 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
103 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
104 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
105 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
106 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
107 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
108 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
109 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
110 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
111 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
112 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
113 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
114 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
117 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
118 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
119 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
120 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
121 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
122 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
123 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
124 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
125 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
126 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
127 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
128 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
129 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
130 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
131 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
146 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
147 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
148 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
152 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
153 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
154 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
155 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
156 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
157 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
158 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
159 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
160 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
161 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
162 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
163 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
164 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
165 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
166 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
167 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
168 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
169 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
170 2643221549 Agromyces sp. Root1464 Isolate Unclassified
171 2643221572 Leifsonia sp. Root60 Isolate Unclassified
172 2643221616 Leifsonia sp. Root227 Isolate Unclassified
173 2643221619 Agromyces sp. Root81 Isolate Unclassified
174 2643221630 Microbacterium sp. Root322 Isolate Unclassified
175 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
176 2643221649 Leifsonia sp. Root4 Isolate Unclassified
177 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
178 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
179 2808606372 Agromyces sp. 23-23 Isolate Unclassified
180 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
181 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
182 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
183 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
184 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
185 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
186 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
187 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
188 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
189 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
190 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
191 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
192 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
193 2928153084 Leifsonia sp. 563 Isolate Unclassified
194 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
195 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
196 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
197 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
198 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
199 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
200 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
201 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
202 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
203 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.57
Metatranscriptomes 2.35
Isolates 12.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.79
Nodule 0
Rhizoplane 4.36
Rhizosphere 63.42
Stem 0
Stem Tuber 0.34
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070682_100085796 3300005337 Bacteria 2049
2 JGI24735J21928_10005154 3300002067 Bacteria 4349
3 JGI25164J39214_1000488 3300002772 Bacteria 19505
4 JGI25165J46597_1000002 3300003214 Bacteria 765387
5 rootL2_10152389 3300003322 Bacteria 6856
6 Ga0006562J51391_1020197 3300003578 Bacteria 3790
7 Ga0055539_1000008 3300003752 Bacteria 537665
8 Ga0055533_1000001 3300003756 Bacteria 1863437
9 Ga0055525_1000221 3300003759 Bacteria 62301
10 Ga0055525_1000365 3300003759 Bacteria 30386
11 Ga0055527_1000001 3300003760 Bacteria 850044
12 Ga0055529_1000018 3300003763 Bacteria 344344
13 Ga0055541_1005291 3300003841 Bacteria 2263
14 Ga0065714_10068207 3300005288 Bacteria 4887
15 Ga0070658_10000833 3300005327 Bacteria 26391
16 Ga0070658_10103258 3300005327 Bacteria 2358
17 Ga0068868_100089451 3300005338 Bacteria 2479
18 Ga0070660_100014013 3300005339 Bacteria 5770
19 Ga0070671_100038054 3300005355 Bacteria 3993
20 Ga0070659_100017625 3300005366 Bacteria 5379
21 Ga0070667_100044739 3300005367 Bacteria 3719
22 Ga0070667_100345480 3300005367 Bacteria 1346
23 Ga0070710_10008332 3300005437 Bacteria 5045
24 Ga0070710_10019619 3300005437 Bacteria 3496
25 Ga0070685_10127710 3300005466 Bacteria 1586
26 Ga0068855_100220913 3300005563 Bacteria 2125
27 Ga0068855_100244672 3300005563 Bacteria 2003
28 Ga0068857_100000943 3300005577 Bacteria 22140
29 Ga0068857_100157181 3300005577 Bacteria 2062
30 Ga0068856_100062832 3300005614 Bacteria 3668
31 Ga0068856_100332018 3300005614 Bacteria 1538
32 Ga0068859_100104831 3300005617 Bacteria 2887
33 Ga0068864_100029115 3300005618 Bacteria 4673
34 Ga0068851_10000003 3300005834 Bacteria 293018
35 Ga0068863_100091033 3300005841 Bacteria 2892
36 Ga0068858_100000709 3300005842 Bacteria 34769
37 Ga0075364_10036309 3300006051 Bacteria 3185
38 Ga0075369_10020303 3300006186 Bacteria 2720
39 Ga0097620_100104830 3300006931 Bacteria 2887
40 Ga0105240_10134827 3300009093 Bacteria 2958
41 Ga0105245_10016441 3300009098 Bacteria 6453
42 Ga0105245_10047984 3300009098 Bacteria 3819
43 Ga0105243_10207987 3300009148 Bacteria 1721
44 Ga0105241_10000379 3300009174 Bacteria 33916
45 Ga0105248_10000599 3300009177 Bacteria 41068
46 Ga0105237_10000131 3300009545 Bacteria 105010
47 Ga0105238_10000941 3300009551 Bacteria 29822
48 Ga0105238_10076888 3300009551 Bacteria 3330
49 Ga0105246_10148896 3300011119 Bacteria 1769
50 Ga0157371_10022890 3300013102 Bacteria 4571
51 Ga0157370_10013645 3300013104 Bacteria 8358
52 Ga0157370_10161330 3300013104 Bacteria 2086
53 Ga0157369_10023995 3300013105 Bacteria 6785
54 Ga0157369_10036946 3300013105 Bacteria 5350
55 Ga0157369_10080346 3300013105 Bacteria 3491
56 Ga0157374_10103151 3300013296 Bacteria 2736
57 Ga0157372_10261643 3300013307 Bacteria 2009
58 Ga0157372_10502275 3300013307 Bacteria 1414
59 Ga0157380_10005061 3300014326 Bacteria 9201
60 Ga0197907_11407005 3300020069 Bacteria 1494
61 Ga0206356_10036474 3300020070 Bacteria 2742
62 Ga0206350_10437987 3300020080 Bacteria 1297
63 Ga0206354_10197247 3300020081 Bacteria 2405
64 Ga0206354_10670039 3300020081 Bacteria 5307
65 Ga0206353_10424351 3300020082 Bacteria 7998
66 Ga0209566_100026 3300025225 Bacteria 367457
67 Ga0209674_100001 3300025226 Bacteria 4013750
68 Ga0209672_100006 3300025228 Bacteria 1004497
69 Ga0209147_101086 3300025229 Bacteria 11418
70 Ga0209563_100001 3300025230 Bacteria 4013775
71 Ga0209563_101204 3300025230 Bacteria 7232
72 Ga0207427_100124 3300025231 Bacteria 98217
73 Ga0209437_100926 3300025233 Bacteria 11130
74 Ga0209677_100001 3300025253 Bacteria 4013787
75 Ga0209148_1000015 3300025254 Bacteria 850103
76 Ga0209148_1001043 3300025254 Bacteria 17184
77 Ga0209233_1000001 3300025261 Bacteria 2992747
78 Ga0209455_1000013 3300025272 Bacteria 850103
79 Ga0209455_1000727 3300025272 Bacteria 18961
80 Ga0207656_10000002 3300025321 Bacteria 792178
81 Ga0207692_10133041 3300025898 Bacteria 1407
82 Ga0207688_10031711 3300025901 Bacteria 2919
83 Ga0207705_10000006 3300025909 Bacteria 657147
84 Ga0207705_10027692 3300025909 Bacteria 4043
85 Ga0207705_10060285 3300025909 Bacteria 2740
86 Ga0207705_10100414 3300025909 Bacteria 2128
87 Ga0207654_10000001 3300025911 Bacteria 1816198
88 Ga0207695_10001590 3300025913 Bacteria 36878
89 Ga0207695_10023383 3300025913 Bacteria 6983
90 Ga0207671_10000002 3300025914 Bacteria 1144816
91 Ga0207671_10022679 3300025914 Bacteria 4743
92 Ga0207657_10006659 3300025919 Bacteria 11954
93 Ga0207694_10000092 3300025924 Bacteria 100605
94 Ga0207659_10133613 3300025926 Bacteria 1919
95 Ga0207687_10034263 3300025927 Bacteria 3447
96 Ga0207687_10117096 3300025927 Bacteria 1987
97 Ga0207644_10057741 3300025931 Bacteria 2803
98 Ga0207690_10004138 3300025932 Bacteria 8574
99 Ga0207690_10009918 3300025932 Bacteria 5656
100 Ga0207709_10127025 3300025935 Bacteria 1731
101 Ga0207711_10001031 3300025941 Bacteria 26688
102 Ga0207667_10005853 3300025949 Bacteria 14973
103 Ga0207667_10037274 3300025949 Bacteria 5198
104 Ga0207667_10247802 3300025949 Bacteria 1823
105 Ga0207640_10062052 3300025981 Bacteria 2478
106 Ga0207658_10022560 3300025986 Bacteria 4384
107 Ga0207658_10120582 3300025986 Bacteria 2090
108 Ga0207703_10000031 3300026035 Bacteria 196940
109 Ga0207639_10018685 3300026041 Bacteria 4929
110 Ga0207678_10044397 3300026067 Bacteria 3845
111 Ga0207678_10236133 3300026067 Bacteria 1565
112 Ga0207702_10065947 3300026078 Bacteria 3102
113 Ga0207702_10306766 3300026078 Bacteria 1508
114 Ga0207676_10052545 3300026095 Bacteria 3186
115 Ga0207674_10001265 3300026116 Bacteria 33027
116 Ga0207698_10000361 3300026142 Bacteria 26745
117 Ga0207698_10000580 3300026142 Bacteria 21391
118 Ga0307515_10028962 3300028794 Bacteria 9384
119 Ga0307515_10223223 3300028794 Bacteria 1696
120 Ga0307408_100494048 3300031548 Bacteria 1070
121 Ga0307514_10031726 3300031649 Bacteria 4235
122 Ga0307518_10061037 3300031838 Bacteria 2738
123 Ga0307406_10124911 3300031901 Bacteria 1796
124 Ga0307409_100316667 3300031995 Bacteria 1458
125 Ga0307416_100205748 3300032002 Bacteria 1872
126 Ga0307416_100368621 3300032002 Bacteria 1461
127 Ga0395899_0006231 3300037312 Bacteria 9241
128 Ga0395900_0002187 3300037418 Bacteria 21855
129 Ga0395900_0171038 3300037418 Bacteria 2212
130 Ga0395898_0000752 3300037466 Bacteria 56634
131 Ga0451793_0356344 3300041452 Bacteria 1853
132 Ga0451795_1012345 3300041456 Bacteria 1267
133 Ga0451806_412837 3300041462 Bacteria 1173
134 Ga0451806_484587 3300041462 Bacteria 1617
135 Ga0466969_0124376 3300044656 Bacteria 1199
136 Ga0466972_0019096 3300044658 Bacteria 3427
137 Ga0466972_0059868 3300044658 Bacteria 1827
138 Ga0466972_0065735 3300044658 Bacteria 1734
139 Ga0466965_0000002 3300044683 Bacteria 297957
140 Ga0466965_0014976 3300044683 Bacteria 3678
141 Ga0466965_0040781 3300044683 Bacteria 2286
142 Ga0466965_0076621 3300044683 Bacteria 1688
143 Ga0466968_0035537 3300044735 Bacteria 2086
144 Ga0466968_0044112 3300044735 Bacteria 1889
145 Ga0466970_0015960 3300044765 Bacteria 3866
146 Ga0466970_0039984 3300044765 Bacteria 2489
147 Ga0466960_0015256 3300044901 Bacteria 3308
148 Ga0466960_0022207 3300044901 Bacteria 2834
149 Ga0466959_0031541 3300045049 Bacteria 3920
150 Ga0495627_006042 3300046453 Bacteria 4792
151 Ga0495590_0001219 3300046457 Bacteria 11238
152 Ga0495650_0000865 3300046471 Bacteria 36187
153 Ga0495656_0004255 3300046615 Bacteria 4888
154 Ga0495672_0042663 3300047320 Bacteria 2734
155 Ga0495686_0072248 3300047472 Bacteria 2122
156 Ga0495686_0082403 3300047472 Bacteria 1963
157 Ga0495686_0129728 3300047472 Bacteria 1496
158 Ga0496101_0044756 3300048904 Bacteria 3168
159 Ga0496102_0036787 3300048905 Bacteria 4412
160 Ga0496103_0036981 3300048906 Bacteria 2991
161 Ga0496105_0005304 3300048908 Bacteria 9771
162 Ga0496107_0050084 3300048910 Bacteria 3010
163 Ga0496113_0139777 3300048916 Bacteria 1905
164 Ga0496114_0066133 3300048917 Bacteria 3030
165 Ga0496115_0016504 3300048918 Bacteria 5624
166 Ga0496115_0104861 3300048918 Bacteria 2320
167 Ga0496117_0001586 3300048920 Bacteria 32228
168 Ga0496117_0011044 3300048920 Bacteria 8131
169 Ga0496118_0006827 3300048921 Bacteria 12384
170 Ga0496118_0014296 3300048921 Bacteria 7443
171 Ga0496118_0068835 3300048921 Bacteria 2568
172 Ga0496119_0006977 3300048922 Bacteria 10298
173 Ga0496120_0000655 3300048923 Bacteria 50898
174 Ga0496120_0073951 3300048923 Bacteria 1863
175 Ga0496121_0050504 3300048924 Bacteria 3513
176 Ga0496122_0000360 3300048925 Bacteria 97913
177 Ga0496122_0005975 3300048925 Bacteria 14245
178 Ga0496122_0053082 3300048925 Bacteria 3059
179 Ga0496123_0002859 3300048926 Bacteria 20356
180 Ga0496123_0086594 3300048926 Bacteria 1878
181 Ga0496125_0019572 3300048928 Bacteria 6379
182 Ga0496126_0003908 3300048929 Bacteria 18310
183 Ga0496126_0005174 3300048929 Bacteria 15080
184 Ga0496126_0014062 3300048929 Bacteria 8108
185 Ga0496126_0208341 3300048929 Bacteria 1647
186 Ga0496126_0255927 3300048929 Bacteria 1457
187 Ga0501031_0003167 3300049568 Bacteria 10560
188 Ga0501031_0203830 3300049568 Bacteria 1290
189 Ga0501032_0003569 3300049569 Bacteria 11861
190 Ga0501032_0017450 3300049569 Bacteria 5042
191 Ga0501032_0056841 3300049569 Bacteria 2629
192 Ga0501032_0068594 3300049569 Bacteria 2367
193 Ga0501032_0092409 3300049569 Bacteria 2007
194 Ga0501033_0026240 3300049570 Bacteria 4386
195 Ga0501033_0046638 3300049570 Bacteria 3222
196 Ga0501033_0114487 3300049570 Bacteria 1960
197 Ga0501034_0003077 3300049571 Bacteria 19243
198 Ga0501034_0008610 3300049571 Bacteria 10767
199 Ga0501034_0009094 3300049571 Bacteria 10435
200 Ga0501034_0084971 3300049571 Bacteria 3166
201 Ga0501034_0092926 3300049571 Bacteria 3013
202 Ga0501034_0097374 3300049571 Bacteria 2937
203 Ga0501034_0100398 3300049571 Bacteria 2888
204 Ga0501034_0182955 3300049571 Bacteria 2060
205 Ga0501034_0379901 3300049571 Bacteria 1338
206 Ga0501036_0003394 3300049572 Bacteria 12724
207 Ga0501036_0088296 3300049572 Bacteria 2620
208 Ga0501037_0008853 3300049573 Bacteria 7372
209 Ga0501037_0111252 3300049573 Bacteria 1973
210 Ga0501038_0006370 3300049574 Bacteria 10923
211 Ga0501038_0040715 3300049574 Bacteria 4055
212 Ga0501039_0019115 3300049575 Bacteria 5256
213 Ga0501042_0003175 3300049578 Bacteria 10247
214 Ga0501043_0013055 3300049579 Bacteria 6493
215 Ga0501046_0004405 3300049580 Bacteria 12786
216 Ga0501047_0095099 3300049581 Bacteria 2858
217 Ga0501047_0142388 3300049581 Bacteria 2275
218 Ga0501047_0306288 3300049581 Bacteria 1430
219 Ga0501048_0016092 3300049582 Bacteria 5515
220 Ga0501070_0000088 3300049586 Bacteria 77423
221 Ga0501070_0005761 3300049586 Bacteria 10565
222 Ga0501070_0010278 3300049586 Bacteria 7914
223 Ga0501070_0041713 3300049586 Bacteria 3822
224 Ga0501073_0000391 3300049589 Bacteria 29750
225 Ga0501073_0119960 3300049589 Bacteria 1823
226 Ga0501076_0142928 3300049592 Bacteria 1945
227 Ga0501080_0105851 3300049742 Bacteria 2608
228 Ga0501083_0000052 3300049744 Bacteria 84349
229 Ga0501083_0008309 3300049744 Bacteria 7341
230 Ga0501035_0071266 3300049822 Bacteria 3078
231 Ga0501035_0078654 3300049822 Bacteria 2913
232 Ga0501035_0135157 3300049822 Bacteria 2147
233 Ga0501044_0055355 3300049823 Bacteria 4074
234 Ga0501045_0049440 3300049824 Bacteria 3066
235 nmdc:mga00v17_33587_c1 3300050491 Bacteria 3041
236 nmdc:mga0yw44_14443_c1 3300050492 Bacteria 4194
237 nmdc:mga0sz30_6201_c2 3300050516 Bacteria 3971
238 Ga0500635_0000013 3300053080 Bacteria 133088
239 Ga0500651_0000892 3300053093 Bacteria 14633
240 Ga0500650_0007829 3300053098 Bacteria 4191
241 Ga0500556_0000001 3300053104 Bacteria 1135060
242 Ga0500556_0000239 3300053104 Bacteria 44477
243 Ga0500562_000806 3300053108 Bacteria 7648
244 Ga0500593_002463 3300053117 Bacteria 6797
245 Ga0500559_0000156 3300053136 Bacteria 53941
246 Ga0500559_0000888 3300053136 Bacteria 19140
247 Ga0500559_0027754 3300053136 Bacteria 2416
248 Ga0500559_0042252 3300053136 Bacteria 1989
249 Ga0500568_0000006 3300053139 Bacteria 522235
250 Ga0500568_0000026 3300053139 Bacteria 165582
251 Ga0500568_0001373 3300053139 Bacteria 15818
252 Ga0500568_0002186 3300053139 Bacteria 11769
253 Ga0500568_0013847 3300053139 Bacteria 3663
254 Ga0500573_0000106 3300053140 Bacteria 35262
255 Ga0500573_0001432 3300053140 Bacteria 11412
256 Ga0500573_0004690 3300053140 Bacteria 7235
257 Ga0500577_0004971 3300053142 Bacteria 3545
258 Ga0500577_0021204 3300053142 Bacteria 2137
259 Ga0500616_0000071 3300053153 Bacteria 232527
260 Ga0500616_0002797 3300053153 Bacteria 14052
261 Ga0500620_000169 3300053155 Bacteria 13137
262 Ga0500645_020376 3300053730 Bacteria 2056
263 2587862568 2585428094 Bacteria 3604039
264 2643733486 2643221542 Bacteria 3563959
265 2643767468 2643221549 Bacteria 4042819
266 2643875443 2643221572 Bacteria 3614809
267 2644095939 2643221616 Bacteria 4066575
268 2644110729 2643221619 Bacteria 4158469
269 2644170060 2643221630 Bacteria 3601215
270 2644183278 2643221632 Bacteria 3406696
271 2644279308 2643221649 Bacteria 3867359
272 2644382498 2643221669 Bacteria 3611286
273 2723642355 2721755702 Bacteria 4373124
274 2808902330 2808606372 Bacteria 4649509
275 2844842344 2844841374 Bacteria 3917147
276 2844854868 2844852863 Bacteria 3849151
277 2852665442 2852663356 Bacteria 4090475
278 2857730009 2857729791 Bacteria 4040535
279 2857739626 2857737099 Bacteria 3104305
280 2862995831 2862993130 Bacteria 3860849
281 2870623798 2870622029 Bacteria 3643329
282 2884765302 2884763398 Bacteria 4091164
283 2895661533 2895660088 Bacteria 3782833
284 2919057992 2919055335 Bacteria 3875751
285 2919445955 2919443155 Bacteria 4072969
286 2919524385 2919523602 Bacteria 3788128
287 2928123231 2928121344 Bacteria 3972376
288 2928155993 2928153084 Bacteria 4020257
289 2935412736 2935409751 Bacteria 4179611
290 2939658285 2939657138 Bacteria 3740283
291 2939663999 2939660829 Bacteria 3784848
292 2946025674 2946024296 Bacteria 3508095
293 2964329460 2964326757 Bacteria 3290868
294 2966922353 2966921586 Bacteria 3092803
295 8004184985 8004182704 Bacteria 3391155
296 8046356219 8046352972 Bacteria 3613806
297 8056038864 8056037122 Bacteria 3854319
298 8057349591 8057345674 Bacteria 4160394
299 Ga0070682_100085796
300 JGI24735J21928_10005154
301 JGI25164J39214_1000488
302 JGI25165J46597_1000002
303 rootL2_10152389
304 Ga0006562J51391_1020197
305 Ga0055539_1000008
306 Ga0055533_1000001
307 Ga0055525_1000221
308 Ga0055525_1000365
309 Ga0055527_1000001
310 Ga0055529_1000018
311 Ga0055541_1005291
312 Ga0065714_10068207
313 Ga0070658_10000833
314 Ga0070658_10103258
315 Ga0068868_100089451
316 Ga0070660_100014013
317 Ga0070671_100038054
318 Ga0070659_100017625
319 Ga0070667_100044739
320 Ga0070667_100345480
321 Ga0070710_10008332
322 Ga0070710_10019619
323 Ga0070685_10127710
324 Ga0068855_100220913
325 Ga0068855_100244672
326 Ga0068857_100000943
327 Ga0068857_100157181
328 Ga0068856_100062832
329 Ga0068856_100332018
330 Ga0068859_100104831
331 Ga0068864_100029115
332 Ga0068851_10000003
333 Ga0068863_100091033
334 Ga0068858_100000709
335 Ga0075364_10036309
336 Ga0075369_10020303
337 Ga0097620_100104830
338 Ga0105240_10134827
339 Ga0105245_10016441
340 Ga0105245_10047984
341 Ga0105243_10207987
342 Ga0105241_10000379
343 Ga0105248_10000599
344 Ga0105237_10000131
345 Ga0105238_10000941
346 Ga0105238_10076888
347 Ga0105246_10148896
348 Ga0157371_10022890
349 Ga0157370_10013645
350 Ga0157370_10161330
351 Ga0157369_10023995
352 Ga0157369_10036946
353 Ga0157369_10080346
354 Ga0157374_10103151
355 Ga0157372_10261643
356 Ga0157372_10502275
357 Ga0157380_10005061
358 Ga0197907_11407005
359 Ga0206356_10036474
360 Ga0206350_10437987
361 Ga0206354_10197247
362 Ga0206354_10670039
363 Ga0206353_10424351
364 Ga0209566_100026
365 Ga0209674_100001
366 Ga0209672_100006
367 Ga0209147_101086
368 Ga0209563_100001
369 Ga0209563_101204
370 Ga0207427_100124
371 Ga0209437_100926
372 Ga0209677_100001
373 Ga0209148_1000015
374 Ga0209148_1001043
375 Ga0209233_1000001
376 Ga0209455_1000013
377 Ga0209455_1000727
378 Ga0207656_10000002
379 Ga0207692_10133041
380 Ga0207688_10031711
381 Ga0207705_10000006
382 Ga0207705_10027692
383 Ga0207705_10060285
384 Ga0207705_10100414
385 Ga0207654_10000001
386 Ga0207695_10001590
387 Ga0207695_10023383
388 Ga0207671_10000002
389 Ga0207671_10022679
390 Ga0207657_10006659
391 Ga0207694_10000092
392 Ga0207659_10133613
393 Ga0207687_10034263
394 Ga0207687_10117096
395 Ga0207644_10057741
396 Ga0207690_10004138
397 Ga0207690_10009918
398 Ga0207709_10127025
399 Ga0207711_10001031
400 Ga0207667_10005853
401 Ga0207667_10037274
402 Ga0207667_10247802
403 Ga0207640_10062052
404 Ga0207658_10022560
405 Ga0207658_10120582
406 Ga0207703_10000031
407 Ga0207639_10018685
408 Ga0207678_10044397
409 Ga0207678_10236133
410 Ga0207702_10065947
411 Ga0207702_10306766
412 Ga0207676_10052545
413 Ga0207674_10001265
414 Ga0207698_10000361
415 Ga0207698_10000580
416 Ga0307515_10028962
417 Ga0307515_10223223
418 Ga0307408_100494048
419 Ga0307514_10031726
420 Ga0307518_10061037
421 Ga0307406_10124911
422 Ga0307409_100316667
423 Ga0307416_100205748
424 Ga0307416_100368621
425 Ga0395899_0006231
426 Ga0395900_0002187
427 Ga0395900_0171038
428 Ga0395898_0000752
429 Ga0451793_0356344
430 Ga0451795_1012345
431 Ga0451806_412837
432 Ga0451806_484587
433 Ga0466969_0124376
434 Ga0466972_0019096
435 Ga0466972_0059868
436 Ga0466972_0065735
437 Ga0466965_0000002
438 Ga0466965_0014976
439 Ga0466965_0040781
440 Ga0466965_0076621
441 Ga0466968_0035537
442 Ga0466968_0044112
443 Ga0466970_0015960
444 Ga0466970_0039984
445 Ga0466960_0015256
446 Ga0466960_0022207
447 Ga0466959_0031541
448 Ga0495627_006042
449 Ga0495590_0001219
450 Ga0495650_0000865
451 Ga0495656_0004255
452 Ga0495672_0042663
453 Ga0495686_0072248
454 Ga0495686_0082403
455 Ga0495686_0129728
456 Ga0496101_0044756
457 Ga0496102_0036787
458 Ga0496103_0036981
459 Ga0496105_0005304
460 Ga0496107_0050084
461 Ga0496113_0139777
462 Ga0496114_0066133
463 Ga0496115_0016504
464 Ga0496115_0104861
465 Ga0496117_0001586
466 Ga0496117_0011044
467 Ga0496118_0006827
468 Ga0496118_0014296
469 Ga0496118_0068835
470 Ga0496119_0006977
471 Ga0496120_0000655
472 Ga0496120_0073951
473 Ga0496121_0050504
474 Ga0496122_0000360
475 Ga0496122_0005975
476 Ga0496122_0053082
477 Ga0496123_0002859
478 Ga0496123_0086594
479 Ga0496125_0019572
480 Ga0496126_0003908
481 Ga0496126_0005174
482 Ga0496126_0014062
483 Ga0496126_0208341
484 Ga0496126_0255927
485 Ga0501031_0003167
486 Ga0501031_0203830
487 Ga0501032_0003569
488 Ga0501032_0017450
489 Ga0501032_0056841
490 Ga0501032_0068594
491 Ga0501032_0092409
492 Ga0501033_0026240
493 Ga0501033_0046638
494 Ga0501033_0114487
495 Ga0501034_0003077
496 Ga0501034_0008610
497 Ga0501034_0009094
498 Ga0501034_0084971
499 Ga0501034_0092926
500 Ga0501034_0097374
501 Ga0501034_0100398
502 Ga0501034_0182955
503 Ga0501034_0379901
504 Ga0501036_0003394
505 Ga0501036_0088296
506 Ga0501037_0008853
507 Ga0501037_0111252
508 Ga0501038_0006370
509 Ga0501038_0040715
510 Ga0501039_0019115
511 Ga0501042_0003175
512 Ga0501043_0013055
513 Ga0501046_0004405
514 Ga0501047_0095099
515 Ga0501047_0142388
516 Ga0501047_0306288
517 Ga0501048_0016092
518 Ga0501070_0000088
519 Ga0501070_0005761
520 Ga0501070_0010278
521 Ga0501070_0041713
522 Ga0501073_0000391
523 Ga0501073_0119960
524 Ga0501076_0142928
525 Ga0501080_0105851
526 Ga0501083_0000052
527 Ga0501083_0008309
528 Ga0501035_0071266
529 Ga0501035_0078654
530 Ga0501035_0135157
531 Ga0501044_0055355
532 Ga0501045_0049440
533 nmdc:mga00v17_33587_c1
534 nmdc:mga0yw44_14443_c1
535 nmdc:mga0sz30_6201_c2
536 Ga0500635_0000013
537 Ga0500651_0000892
538 Ga0500650_0007829
539 Ga0500556_0000001
540 Ga0500556_0000239
541 Ga0500562_000806
542 Ga0500593_002463
543 Ga0500559_0000156
544 Ga0500559_0000888
545 Ga0500559_0027754
546 Ga0500559_0042252
547 Ga0500568_0000006
548 Ga0500568_0000026
549 Ga0500568_0001373
550 Ga0500568_0002186
551 Ga0500568_0013847
552 Ga0500573_0000106
553 Ga0500573_0001432
554 Ga0500573_0004690
555 Ga0500577_0004971
556 Ga0500577_0021204
557 Ga0500616_0000071
558 Ga0500616_0002797
559 Ga0500620_000169
560 Ga0500645_020376
561 2587862568
562 2643733486
563 2643767468
564 2643875443
565 2644095939
566 2644110729
567 2644170060
568 2644183278
569 2644279308
570 2644382498
571 2723642355
572 2808902330
573 2844842344
574 2844854868
575 2852665442
576 2857730009
577 2857739626
578 2862995831
579 2870623798
580 2884765302
581 2895661533
582 2919057992
583 2919445955
584 2919524385
585 2928123231
586 2928155993
587 2935412736
588 2939658285
589 2939663999
590 2946025674
591 2964329460
592 2966922353
593 8004184985
594 8046356219
595 8056038864
596 8057349591

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01628

HrcA

HrcA protein C terminal domain

103

333

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4lry-assembly1.cif.gz_C crystal structure of the e.coli dhar(n)-dhak(t79l) complex 0.8192 274 337
4lrz-assembly1.cif.gz_H crystal structure of the e.coli dhar(n)-dhal complex 0.8131 274 337
7pq5-assembly1.cif.gz_L photorhabdus laumondii t6ss-associated rhs protein carrying the tre23 toxin domain 0.8021 135 164
3t8q-assembly1.cif.gz_A crystal structure of mandelate racemase/muconate lactonizing enzyme family protein from hoeflea phototrophica 0.7906 132 201
3u4f-assembly2.cif.gz_D crystal structure of a mandelate racemase (muconate lactonizing enzyme family protein) from roseovarius nubinhibens 0.7834 131 201
ID Description Score Start End Superfamily
af_A2AKB4_398_502_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.9188 132 163 2.30.29.30
af_B0V237_261_365_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.8466 132 165 2.30.29.30
3tvvB02 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.8355 133 163 2.30.29.30
af_F1QWX8_242_353_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.8249 131 165 2.30.29.30
4lrzH01 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;GAF domain 0.8142 274 337 3.30.450.40
ID Description Score Start End GO Terms
AF-A0A7X6EK62-F1-model_v4 deleted 0.9485 229 339
AF-A0A7X6EK62-F1-model_v4 deleted 0.8936 229 339
AF-A0A6G3WSA3-F1-model_v4 Heat-inducible transcriptional repressor HrcA 0.8872 133 224 GO:0003677
GO:0045892
AF-A0A6J6HLV4-F1-model_v4 Unannotated protein 0.8544 216 338 GO:0003677
GO:0045892
AF-A0A6J6HLV4-F1-model_v4 Unannotated protein 0.8303 216 338 GO:0003677
GO:0045892

Map