F394256

General Info

Members Datasets Scaffolds Average Seq Length
298 168 273 564

Family's Representative Sequence

Representative Sequence 3300009553|Ga0105249_10015759|Ga0105249_100157596
Length 648
Sequence VLNDWSRGVFGAFDHAPTHPFFLSRSSIGAGEFSPGGLQAYDSAAAWGVATYPIRGLAGMADVFVSYARTDRARVALLVAAIEAKGWLVWWDPEITPGQEFDDQIEAEINAAKAVVVVWTPISVASRWVRGEAREAAERGIMVPVRFEQARLPMDVRAIHTTDFDDWGGNANSPQAQELLRALAGTIARAQAAKSTAPGSSTGVSGKPATNIAICVLPFANMSGEQEQEYFSDGITEDIITDLSKVSALAVVSRNSAFMYKAKHVDLPKVARELKVSHVLEGSVRKAGNRLRITAQLIDGATNNHVWAERYDRDATDIFAIQDEISEAIVRALKLNLLPEEKQAIERRGTDNAEAHDLYLMARQTYITGRESDPRTAETIIRLCTRATEIDPGYAQAWTLMAIGCRALRETGSGQSTAAMQAVERALVLNPNLAEARATKAQILLMDGDEQAAAAEVANALALDPESYEVNRAAGRLNYHRKRHADAALCYEKAAKLMESDINSVAMLVSCYTALGDVAGARRAAQLTLSRAEAVLAHDPNNPVVVGVSAYSLAALGQGERAKARMHRALLIDPDSFNMRYNFGCALCVSLRDKDAALEMLGPVFETITDSFLPYAKADPDLELLRDDPRFQAMVAAAEARHAAAARM

Samples

Sample ID Description Type Environment
1 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
67 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
72 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
115 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
116 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
117 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
118 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
119 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
120 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
121 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
122 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
123 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
124 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
125 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
126 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
127 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
128 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
129 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
130 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
131 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
132 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
133 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
134 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
135 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
136 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
137 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
138 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
139 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
140 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
141 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
142 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
143 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
144 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
145 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
146 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
147 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
148 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
149 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
150 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
151 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
152 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
157 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
160 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
161 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
162 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
163 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
164 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.98
Metatranscriptomes 3.02
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.34
Rhizosphere 98.66
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000877 3300001915 Bacteria 9070
2 JGI24740J21852_10003826 3300001979 Bacteria 6543
3 JGI24740J21852_10013081 3300001979 Bacteria 3110
4 JGI24739J22299_10003011 3300001989 Bacteria 6447
5 JGI24737J22298_10000770 3300001990 Bacteria 11319
6 Ga0070658_10000183 3300005327 Bacteria 54970
7 Ga0070658_10016978 3300005327 Bacteria 5825
8 Ga0070658_10062980 3300005327 Bacteria 3023
9 Ga0070670_100007965 3300005331 Bacteria 9011
10 Ga0070666_10000849 3300005335 Bacteria 18514
11 Ga0070680_100026382 3300005336 Bacteria 4647
12 Ga0070680_100033891 3300005336 Bacteria 4118
13 Ga0070680_100047093 3300005336 Bacteria 3510
14 Ga0070682_100007428 3300005337 Bacteria 6181
15 Ga0070682_100051019 3300005337 Bacteria 2584
16 Ga0070660_100000536 3300005339 Bacteria 25355
17 Ga0070689_100080275 3300005340 Bacteria 2560
18 Ga0070691_10003031 3300005341 Bacteria 7525
19 Ga0070661_100000682 3300005344 Bacteria 24927
20 Ga0070661_100043298 3300005344 Bacteria 3288
21 Ga0070692_10005492 3300005345 Bacteria 5415
22 Ga0070692_10017506 3300005345 Bacteria 3427
23 Ga0070669_100014580 3300005353 Bacteria 5593
24 Ga0070675_100005466 3300005354 Bacteria 9723
25 Ga0070671_100069989 3300005355 Bacteria 2927
26 Ga0070659_100000683 3300005366 Bacteria 24702
27 Ga0070659_100024418 3300005366 Bacteria 4634
28 Ga0070659_100080125 3300005366 Bacteria 2607
29 Ga0070667_100003558 3300005367 Bacteria 13271
30 Ga0070663_100003431 3300005455 Bacteria 9139
31 Ga0070662_100001032 3300005457 Bacteria 17006
32 Ga0070662_100006965 3300005457 Bacteria 7315
33 Ga0070662_100019059 3300005457 Bacteria 4653
34 Ga0070681_10004215 3300005458 Bacteria 13623
35 Ga0070681_10009903 3300005458 Bacteria 9391
36 Ga0070681_10023870 3300005458 Bacteria 6156
37 Ga0070679_100001333 3300005530 Bacteria 21773
38 Ga0070679_100009042 3300005530 Bacteria 9397
39 Ga0070679_100078238 3300005530 Bacteria 3296
40 Ga0070679_100209680 3300005530 Bacteria 1912
41 Ga0068853_100007843 3300005539 Bacteria 8561
42 Ga0070672_100006136 3300005543 Bacteria 8046
43 Ga0070696_100034093 3300005546 Bacteria 3501
44 Ga0070693_100001146 3300005547 Bacteria 11900
45 Ga0070665_100003564 3300005548 Bacteria 16507
46 Ga0068855_100013283 3300005563 Bacteria 9931
47 Ga0068855_100018766 3300005563 Bacteria 8315
48 Ga0070664_100001349 3300005564 Bacteria 19586
49 Ga0070664_100033282 3300005564 Bacteria 4316
50 Ga0068857_100037431 3300005577 Bacteria 4297
51 Ga0068854_100015855 3300005578 Bacteria 5007
52 Ga0068854_100049985 3300005578 Bacteria 2989
53 Ga0068856_100000213 3300005614 Bacteria 62582
54 Ga0068856_100046108 3300005614 Bacteria 4294
55 Ga0068852_100023778 3300005616 Bacteria 4940
56 Ga0068859_100051465 3300005617 Bacteria 4140
57 Ga0068864_100015015 3300005618 Bacteria 6437
58 Ga0068864_100062501 3300005618 Bacteria 3226
59 Ga0068861_100151079 3300005719 Bacteria 1906
60 Ga0068851_10030475 3300005834 Bacteria 2675
61 Ga0068863_100042273 3300005841 Bacteria 4331
62 Ga0068860_100052050 3300005843 Bacteria 3895
63 Ga0068862_100076581 3300005844 Bacteria 2895
64 Ga0097621_100030907 3300006237 Bacteria 4243
65 Ga0068871_100004211 3300006358 Bacteria 9962
66 Ga0075433_10000754 3300006852 Bacteria 22233
67 Ga0075434_100000822 3300006871 Bacteria 24682
68 Ga0075429_100035498 3300006880 Bacteria 4336
69 Ga0097620_100051463 3300006931 Bacteria 4140
70 Ga0075435_100043240 3300007076 Bacteria 3606
71 Ga0099795_10000011 3300007788 Bacteria 78558
72 Ga0105240_10167450 3300009093 Bacteria 2605
73 Ga0105241_10035069 3300009174 Bacteria 3773
74 Ga0105248_10001704 3300009177 Bacteria 24459
75 Ga0105238_10044343 3300009551 Bacteria 4496
76 Ga0105238_10075225 3300009551 Bacteria 3369
77 Ga0105238_10131772 3300009551 Bacteria 2478
78 Ga0105249_10015759 3300009553 Bacteria 6695
79 Ga0099796_10000015 3300010159 Bacteria 53483
80 Ga0105239_10139690 3300010375 Bacteria 2699
81 Ga0157373_10010166 3300013100 Bacteria 6932
82 Ga0157373_10054273 3300013100 Bacteria 2848
83 Ga0157373_10077804 3300013100 Bacteria 2340
84 Ga0157371_10005349 3300013102 Bacteria 10850
85 Ga0157370_10007668 3300013104 Bacteria 11710
86 Ga0157370_10028228 3300013104 Bacteria 5523
87 Ga0157370_10028288 3300013104 Bacteria 5516
88 Ga0157369_10000090 3300013105 Bacteria 127102
89 Ga0157369_10068039 3300013105 Bacteria 3827
90 Ga0157369_10074049 3300013105 Bacteria 3652
91 Ga0157369_10147018 3300013105 Bacteria 2492
92 Ga0163162_10006993 3300013306 Bacteria 10945
93 Ga0163162_10048694 3300013306 Bacteria 4247
94 Ga0157372_10002747 3300013307 Bacteria 19019
95 Ga0157372_10137724 3300013307 Bacteria 2812
96 Ga0157375_10023449 3300013308 Bacteria 5694
97 Ga0163163_10000178 3300014325 Bacteria 65511
98 Ga0157380_10086826 3300014326 Bacteria 2571
99 Ga0206356_10033577 3300020070 Bacteria 5984
100 Ga0206352_10806113 3300020078 Bacteria 4296
101 Ga0206350_10270295 3300020080 Bacteria 2231
102 Ga0206354_10577805 3300020081 Bacteria 5560
103 Ga0206353_10077237 3300020082 Bacteria 3640
104 Ga0206353_12056418 3300020082 Bacteria 2599
105 Ga0154015_1019628 3300020610 Bacteria 3568
106 Ga0207680_10001140 3300025903 Bacteria 12557
107 Ga0207647_10008073 3300025904 Bacteria 7564
108 Ga0207647_10039005 3300025904 Bacteria 3000
109 Ga0207645_10011639 3300025907 Bacteria 6001
110 Ga0207705_10000234 3300025909 Bacteria 55024
111 Ga0207705_10010135 3300025909 Bacteria 6859
112 Ga0207705_10011743 3300025909 Bacteria 6328
113 Ga0207705_10023545 3300025909 Bacteria 4393
114 Ga0207705_10075861 3300025909 Bacteria 2443
115 Ga0207654_10039571 3300025911 Bacteria 2653
116 Ga0207707_10000252 3300025912 Bacteria 58932
117 Ga0207707_10000312 3300025912 Bacteria 51136
118 Ga0207707_10009882 3300025912 Bacteria 8272
119 Ga0207707_10049980 3300025912 Bacteria 3643
120 Ga0207695_10004345 3300025913 Bacteria 19409
121 Ga0207695_10011895 3300025913 Bacteria 10486
122 Ga0207695_10024089 3300025913 Bacteria 6859
123 Ga0207695_10121067 3300025913 Bacteria 2585
124 Ga0207660_10001016 3300025917 Bacteria 18590
125 Ga0207660_10002739 3300025917 Bacteria 11540
126 Ga0207657_10001592 3300025919 Bacteria 24383
127 Ga0207657_10023570 3300025919 Bacteria 5728
128 Ga0207657_10029104 3300025919 Bacteria 5033
129 Ga0207657_10034901 3300025919 Bacteria 4515
130 Ga0207649_10000159 3300025920 Bacteria 54703
131 Ga0207652_10000926 3300025921 Bacteria 27606
132 Ga0207652_10002193 3300025921 Bacteria 16685
133 Ga0207652_10052282 3300025921 Bacteria 3505
134 Ga0207694_10005629 3300025924 Bacteria 9606
135 Ga0207659_10018638 3300025926 Bacteria 4553
136 Ga0207644_10005752 3300025931 Bacteria 8066
137 Ga0207690_10000120 3300025932 Bacteria 65338
138 Ga0207690_10018094 3300025932 Bacteria 4317
139 Ga0207690_10038805 3300025932 Bacteria 3102
140 Ga0207706_10000200 3300025933 Bacteria 65947
141 Ga0207706_10001222 3300025933 Bacteria 25958
142 Ga0207704_10008583 3300025938 Bacteria 4895
143 Ga0207691_10074510 3300025940 Bacteria 3061
144 Ga0207711_10001359 3300025941 Bacteria 23095
145 Ga0207661_10013431 3300025944 Bacteria 5981
146 Ga0207661_10063718 3300025944 Bacteria 2986
147 Ga0207679_10080750 3300025945 Bacteria 2484
148 Ga0207679_10132781 3300025945 Bacteria 2000
149 Ga0207667_10000443 3300025949 Bacteria 55591
150 Ga0207667_10037642 3300025949 Bacteria 5170
151 Ga0207667_10044792 3300025949 Bacteria 4687
152 Ga0207712_10089024 3300025961 Bacteria 2268
153 Ga0207640_10005584 3300025981 Bacteria 6859
154 Ga0207640_10005859 3300025981 Bacteria 6703
155 Ga0207640_10016864 3300025981 Bacteria 4259
156 Ga0207658_10004243 3300025986 Bacteria 9985
157 Ga0207639_10000282 3300026041 Bacteria 36549
158 Ga0207639_10014560 3300026041 Bacteria 5537
159 Ga0207639_10083442 3300026041 Bacteria 2536
160 Ga0207678_10008434 3300026067 Bacteria 9087
161 Ga0207678_10024601 3300026067 Bacteria 5260
162 Ga0207678_10047664 3300026067 Bacteria 3705
163 Ga0207702_10001027 3300026078 Bacteria 28669
164 Ga0207702_10008325 3300026078 Bacteria 8756
165 Ga0207702_10027248 3300026078 Bacteria 4745
166 Ga0207641_10103394 3300026088 Bacteria 2513
167 Ga0207648_10009454 3300026089 Bacteria 9337
168 Ga0207676_10047613 3300026095 Bacteria 3324
169 Ga0207675_100169862 3300026118 Bacteria 2084
170 Ga0207683_10017153 3300026121 Bacteria 6164
171 Ga0207683_10088724 3300026121 Bacteria 2752
172 Ga0207698_10001971 3300026142 Bacteria 12075
173 Ga0207698_10002616 3300026142 Bacteria 10706
174 Ga0209179_1000040 3300027512 Bacteria 27072
175 Ga0209970_1002955 3300027614 Bacteria 2866
176 Ga0209983_1000981 3300027665 Bacteria 6291
177 Ga0209971_1001108 3300027682 Bacteria 6838
178 Ga0209998_10008328 3300027717 Bacteria 2148
179 Ga0209974_10023669 3300027876 Bacteria 2033
180 Ga0268266_10023069 3300028379 Bacteria 5297
181 Ga0268264_10030692 3300028381 Bacteria 4406
182 Ga0307408_100064857 3300031548 Bacteria 2677
183 Ga0307408_100085386 3300031548 Bacteria 2370
184 Ga0316575_10011966 3300031665 Bacteria 3221
185 Ga0307405_10028165 3300031731 Bacteria 3268
186 Ga0307405_10041891 3300031731 Bacteria 2784
187 Ga0307405_10076206 3300031731 Bacteria 2175
188 Ga0307413_10025855 3300031824 Bacteria 3226
189 Ga0307410_10013641 3300031852 Bacteria 4749
190 Ga0307410_10054795 3300031852 Bacteria 2704
191 Ga0307406_10080541 3300031901 Bacteria 2162
192 Ga0307412_10099101 3300031911 Bacteria 2057
193 Ga0307409_100140916 3300031995 Bacteria 2077
194 Ga0307416_100000416 3300032002 Bacteria 21677
195 Ga0307416_100110745 3300032002 Bacteria 2418
196 Ga0307414_10055839 3300032004 Bacteria 2766
197 Ga0307414_10101717 3300032004 Bacteria 2164
198 Ga0307411_10014677 3300032005 Bacteria 4370
199 Ga0307411_10066537 3300032005 Bacteria 2421
200 Ga0307415_100007804 3300032126 Bacteria 5878
201 Ga0307415_100028040 3300032126 Bacteria 3576
202 Ga0373937_0055413 3300036401 Bacteria 3639
203 Ga0373937_0059456 3300036401 Bacteria 3513
204 Ga0316584_0104236 3300036712 Bacteria 2123
205 Ga0395899_0003741 3300037312 Bacteria 12019
206 Ga0395899_0078837 3300037312 Bacteria 2400
207 Ga0395899_0078991 3300037312 Bacteria 2397
208 Ga0395900_0000657 3300037418 Bacteria 46277
209 Ga0395900_0011164 3300037418 Bacteria 9184
210 Ga0395900_0142480 3300037418 Bacteria 2453
211 Ga0395898_0003602 3300037466 Bacteria 17250
212 Ga0395898_0100607 3300037466 Bacteria 2776
213 Ga0395905_0004190 3300037471 Bacteria 15083
214 Ga0395905_0007093 3300037471 Bacteria 11200
215 Ga0395905_0039077 3300037471 Bacteria 4452
216 Ga0395905_0097478 3300037471 Bacteria 2760
217 Ga0395901_0001734 3300038443 Bacteria 22531
218 Ga0395901_0070874 3300038443 Bacteria 3631
219 Ga0439449_0006895 3300042007 Bacteria 4331
220 Ga0450920_000437 3300042122 Bacteria 6463
221 Ga0450920_000784 3300042122 Bacteria 5126
222 Ga0450923_001338 3300042125 Bacteria 3230
223 Ga0450896_001694 3300042133 Bacteria 2764
224 Ga0450910_002495 3300042147 Bacteria 2420
225 Ga0450908_000727 3300042184 Bacteria 6321
226 Ga0450908_002419 3300042184 Bacteria 3653
227 Ga0439434_0001228 3300042435 Bacteria 7377
228 Ga0439460_0006045 3300042461 Bacteria 2987
229 Ga0450918_001892 3300042531 Bacteria 4049
230 Ga0450918_002322 3300042531 Bacteria 3598
231 Ga0466967_0070048 3300045976 Bacteria 3136
232 Ga0466967_0081714 3300045976 Bacteria 2919
233 Ga0495580_0097039 3300046472 Bacteria 2050
234 Ga0495656_0027261 3300046615 Bacteria 2280
235 Ga0495659_0006433 3300046664 Bacteria 3707
236 Ga0495657_0041493 3300046675 Bacteria 3148
237 Ga0495657_0064274 3300046675 Bacteria 2418
238 Ga0495636_0000187 3300047318 Bacteria 24622
239 Ga0496104_0000048 3300048907 Bacteria 147443
240 Ga0496105_0000065 3300048908 Bacteria 83194
241 Ga0496111_0129199 3300048914 Bacteria 1869
242 Ga0496112_0039593 3300048915 Bacteria 4607
243 Ga0501033_0021463 3300049570 Bacteria 4872
244 Ga0501034_0019666 3300049571 Bacteria 6904
245 Ga0501038_0072690 3300049574 Bacteria 2914
246 Ga0501047_0013144 3300049581 Bacteria 7841
247 Ga0501047_0038045 3300049581 Bacteria 4654
248 Ga0501047_0113472 3300049581 Bacteria 2592
249 Ga0501068_0004534 3300049584 Bacteria 7559
250 Ga0501068_0037231 3300049584 Bacteria 2913
251 Ga0501069_0031509 3300049585 Bacteria 2916
252 Ga0501070_0005666 3300049586 Bacteria 10648
253 Ga0501070_0005935 3300049586 Bacteria 10410
254 Ga0501070_0011849 3300049586 Bacteria 7361
255 Ga0501070_0018011 3300049586 Bacteria 5926
256 Ga0501070_0018312 3300049586 Bacteria 5875
257 Ga0501070_0107840 3300049586 Bacteria 2301
258 Ga0501071_0002869 3300049587 Bacteria 10624
259 Ga0501073_0008994 3300049589 Bacteria 7376
260 Ga0501073_0014029 3300049589 Bacteria 5822
261 Ga0501074_0003429 3300049590 Bacteria 11238
262 Ga0501074_0014495 3300049590 Bacteria 5735
263 Ga0501074_0039899 3300049590 Bacteria 3399
264 Ga0501079_0085593 3300049741 Bacteria 2440
265 Ga0501080_0002756 3300049742 Bacteria 15432
266 Ga0501080_0006388 3300049742 Bacteria 10576
267 Ga0501080_0006906 3300049742 Bacteria 10239
268 Ga0501035_0017396 3300049822 Bacteria 6629
269 Ga0501035_0072645 3300049822 Bacteria 3044
270 Ga0501044_0051573 3300049823 Bacteria 4241
271 nmdc:mga08y16_50322_c1 3300050511 Bacteria 4361
272 nmdc:mga0n895_397_c1 3300050512 Bacteria 29224
273 nmdc:mga0a205_7232_c1 3300050515 Bacteria 10036

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049586 Ga0501070_0107840 Ga0501070_0107840_34_1620 449
2 3300031548 Ga0307408_100064857 Ga0307408_1000648573 478
3 3300005353 Ga0070669_100014580 Ga0070669_1000145807 479
4 3300005457 Ga0070662_100019059 Ga0070662_1000190594 479
5 3300005719 Ga0068861_100151079 Ga0068861_1001510791 479
6 3300005844 Ga0068862_100076581 Ga0068862_1000765811 479
7 3300014326 Ga0157380_10086826 Ga0157380_100868262 480
8 3300025907 Ga0207645_10011639 Ga0207645_100116394 480
9 3300026118 Ga0207675_100169862 Ga0207675_1001698622 480
10 3300027614 Ga0209970_1002955 Ga0209970_10029552 480
11 3300027665 Ga0209983_1000981 Ga0209983_10009812 480
12 3300027682 Ga0209971_1001108 Ga0209971_10011086 480
13 3300027717 Ga0209998_10008328 Ga0209998_100083282 480
14 3300027876 Ga0209974_10023669 Ga0209974_100236691 480
15 3300031731 Ga0307405_10076206 Ga0307405_100762062 480
16 3300031911 Ga0307412_10099101 Ga0307412_100991011 481
17 3300032005 Ga0307411_10014677 Ga0307411_100146773 481
18 3300045976 Ga0466967_0070048 Ga0466967_0070048_37_1698 481
19 3300050511 nmdc:mga08y16_50322_c1 nmdc:mga08y16_50322_c1_746_2512 481
20 3300006880 Ga0075429_100035498 Ga0075429_1000354982 482
21 3300013100 Ga0157373_10077804 Ga0157373_100778042 488
22 3300037418 Ga0395900_0000657 Ga0395900_0000657_11748_13538 488
23 3300037312 Ga0395899_0003741 Ga0395899_0003741_8143_9912 489
24 3300037418 Ga0395900_0011164 Ga0395900_0011164_2108_3877 489
25 3300037466 Ga0395898_0003602 Ga0395898_0003602_7411_9180 489
26 3300037471 Ga0395905_0007093 Ga0395905_0007093_4124_5893 489
27 3300038443 Ga0395901_0001734 Ga0395901_0001734_18376_20145 489
28 3300005341 Ga0070691_10003031 Ga0070691_100030314 490
29 3300005614 Ga0068856_100046108 Ga0068856_1000461082 490
30 3300013105 Ga0157369_10068039 Ga0157369_100680393 491
31 3300025919 Ga0207657_10023570 Ga0207657_100235704 491
32 3300005354 Ga0070675_100005466 Ga0070675_1000054666 492
33 3300025926 Ga0207659_10018638 Ga0207659_100186383 492
34 3300032002 Ga0307416_100000416 Ga0307416_1000004162 493
35 3300049584 Ga0501068_0004534 Ga0501068_0004534_5691_7484 496
36 3300005530 Ga0070679_100078238 Ga0070679_1000782382 501
37 3300013104 Ga0157370_10007668 Ga0157370_1000766812 501
38 3300013306 Ga0163162_10048694 Ga0163162_100486942 502
39 3300025938 Ga0207704_10008583 Ga0207704_100085832 502
40 3300025944 Ga0207661_10013431 Ga0207661_100134312 502
41 3300042122 Ga0450920_000784 Ga0450920_000784_3342_5102 502
42 3300042125 Ga0450923_001338 Ga0450923_001338_878_2638 502
43 3300042184 Ga0450908_000727 Ga0450908_000727_1914_3674 502
44 3300042531 Ga0450918_002322 Ga0450918_002322_673_2433 502
45 3300048907 Ga0496104_0000048 Ga0496104_0000048_123166_124935 502
46 3300048908 Ga0496105_0000065 Ga0496105_0000065_58894_60663 502
47 3300031665 Ga0316575_10011966 Ga0316575_100119663 503
48 3300036401 Ga0373937_0055413 Ga0373937_0055413_1170_2939 503
49 3300046472 Ga0495580_0097039 Ga0495580_0097039_271_2040 503
50 3300001979 JGI24740J21852_10013081 JGI24740J21852_100130812 504
51 3300001989 JGI24739J22299_10003011 JGI24739J22299_100030113 504
52 3300001990 JGI24737J22298_10000770 JGI24737J22298_100007709 504
53 3300005327 Ga0070658_10000183 Ga0070658_1000018344 504
54 3300005331 Ga0070670_100007965 Ga0070670_1000079652 504
55 3300005335 Ga0070666_10000849 Ga0070666_1000084911 504
56 3300005337 Ga0070682_100007428 Ga0070682_1000074285 504
57 3300005339 Ga0070660_100000536 Ga0070660_10000053622 504
58 3300005344 Ga0070661_100000682 Ga0070661_10000068211 504
59 3300005355 Ga0070671_100069989 Ga0070671_1000699893 504
60 3300005366 Ga0070659_100000683 Ga0070659_1000006833 504
61 3300005367 Ga0070667_100003558 Ga0070667_1000035587 504
62 3300005455 Ga0070663_100003431 Ga0070663_1000034317 504
63 3300005457 Ga0070662_100001032 Ga0070662_1000010323 504
64 3300005539 Ga0068853_100007843 Ga0068853_1000078437 504
65 3300005547 Ga0070693_100001146 Ga0070693_1000011467 504
66 3300005548 Ga0070665_100003564 Ga0070665_10000356414 504
67 3300005563 Ga0068855_100013283 Ga0068855_1000132832 504
68 3300005564 Ga0070664_100001349 Ga0070664_10000134910 504
69 3300005614 Ga0068856_100000213 Ga0068856_10000021344 504
70 3300005616 Ga0068852_100023778 Ga0068852_1000237783 504
71 3300005618 Ga0068864_100015015 Ga0068864_1000150152 504
72 3300005618 Ga0068864_100062501 Ga0068864_1000625013 504
73 3300009174 Ga0105241_10035069 Ga0105241_100350693 504
74 3300009177 Ga0105248_10001704 Ga0105248_1000170421 504
75 3300009551 Ga0105238_10075225 Ga0105238_100752252 504
76 3300013102 Ga0157371_10005349 Ga0157371_100053497 504
77 3300013307 Ga0157372_10137724 Ga0157372_101377242 504
78 3300014325 Ga0163163_10000178 Ga0163163_1000017832 504
79 3300025903 Ga0207680_10001140 Ga0207680_1000114011 504
80 3300025909 Ga0207705_10000234 Ga0207705_1000023444 504
81 3300025919 Ga0207657_10001592 Ga0207657_100015923 504
82 3300025920 Ga0207649_10000159 Ga0207649_1000015915 504
83 3300025931 Ga0207644_10005752 Ga0207644_100057528 504
84 3300025932 Ga0207690_10000120 Ga0207690_1000012046 504
85 3300025933 Ga0207706_10000200 Ga0207706_1000020044 504
86 3300025941 Ga0207711_10001359 Ga0207711_100013594 504
87 3300025949 Ga0207667_10000443 Ga0207667_1000044358 504
88 3300025981 Ga0207640_10005859 Ga0207640_100058592 504
89 3300025986 Ga0207658_10004243 Ga0207658_100042436 504
90 3300026041 Ga0207639_10000282 Ga0207639_1000028221 504
91 3300026067 Ga0207678_10008434 Ga0207678_100084343 504
92 3300026078 Ga0207702_10001027 Ga0207702_100010277 504
93 3300026095 Ga0207676_10047613 Ga0207676_100476132 504
94 3300026142 Ga0207698_10002616 Ga0207698_100026167 504
95 3300028379 Ga0268266_10023069 Ga0268266_100230693 504
96 3300048914 Ga0496111_0129199 Ga0496111_0129199_22_1836 504
97 3300048915 Ga0496112_0039593 Ga0496112_0039593_1399_3213 504
98 3300005336 Ga0070680_100047093 Ga0070680_1000470932 505
99 3300005458 Ga0070681_10009903 Ga0070681_100099032 505
100 3300005530 Ga0070679_100009042 Ga0070679_1000090425 505
101 3300006852 Ga0075433_10000754 Ga0075433_100007546 505
102 3300006871 Ga0075434_100000822 Ga0075434_10000082223 505
103 3300007076 Ga0075435_100043240 Ga0075435_1000432402 505
104 3300025912 Ga0207707_10000312 Ga0207707_1000031245 505
105 3300025917 Ga0207660_10002739 Ga0207660_100027392 505
106 3300025921 Ga0207652_10000926 Ga0207652_100009262 505
107 3300037471 Ga0395905_0039077 Ga0395905_0039077_1106_2902 505
108 3300050512 nmdc:mga0n895_397_c1 nmdc:mga0n895_397_c1_6945_8738 505
109 3300050515 nmdc:mga0a205_7232_c1 nmdc:mga0a205_7232_c1_3092_4885 505
110 3300042007 Ga0439449_0006895 Ga0439449_0006895_2481_4304 506
111 3300005366 Ga0070659_100024418 Ga0070659_1000244183 507
112 3300025932 Ga0207690_10018094 Ga0207690_100180943 507
113 3300036401 Ga0373937_0059456 Ga0373937_0059456_716_2497 507
114 3300036712 Ga0316584_0104236 Ga0316584_0104236_248_2023 508
115 3300005337 Ga0070682_100051019 Ga0070682_1000510192 509
116 3300031824 Ga0307413_10025855 Ga0307413_100258551 509
117 3300032004 Ga0307414_10055839 Ga0307414_100558393 509
118 3300005336 Ga0070680_100026382 Ga0070680_1000263821 510
119 3300005458 Ga0070681_10004215 Ga0070681_100042155 510
120 3300005530 Ga0070679_100001333 Ga0070679_1000013335 510
121 3300005530 Ga0070679_100209680 Ga0070679_1002096801 510
122 3300005563 Ga0068855_100018766 Ga0068855_1000187663 510
123 3300005617 Ga0068859_100051465 Ga0068859_1000514653 510
124 3300005843 Ga0068860_100052050 Ga0068860_1000520502 510
125 3300006931 Ga0097620_100051463 Ga0097620_1000514632 510
126 3300009551 Ga0105238_10044343 Ga0105238_100443432 510
127 3300013104 Ga0157370_10028288 Ga0157370_100282884 510
128 3300020080 Ga0206350_10270295 Ga0206350_102702952 510
129 3300020082 Ga0206353_10077237 Ga0206353_100772372 510
130 3300025904 Ga0207647_10008073 Ga0207647_100080732 510
131 3300025912 Ga0207707_10009882 Ga0207707_100098825 510
132 3300025917 Ga0207660_10001016 Ga0207660_1000101611 510
133 3300025921 Ga0207652_10002193 Ga0207652_100021936 510
134 3300025945 Ga0207679_10132781 Ga0207679_101327811 510
135 3300026078 Ga0207702_10008325 Ga0207702_100083254 510
136 3300026142 Ga0207698_10001971 Ga0207698_100019713 510
137 3300028381 Ga0268264_10030692 Ga0268264_100306923 510
138 3300031852 Ga0307410_10013641 Ga0307410_100136415 510
139 3300049584 Ga0501068_0037231 Ga0501068_0037231_625_2367 510
140 3300007788 Ga0099795_10000011 Ga0099795_1000001167 511
141 3300010159 Ga0099796_10000015 Ga0099796_100000154 511
142 3300027512 Ga0209179_1000040 Ga0209179_100004017 511
143 3300031731 Ga0307405_10041891 Ga0307405_100418912 514
144 3300047318 Ga0495636_0000187 Ga0495636_0000187_7495_9231 514
145 3300049586 Ga0501070_0005935 Ga0501070_0005935_7005_8807 514
146 3300013308 Ga0157375_10023449 Ga0157375_100234492 515
147 3300045976 Ga0466967_0081714 Ga0466967_0081714_827_2614 515
148 3300046615 Ga0495656_0027261 Ga0495656_0027261_386_2125 515
149 3300046664 Ga0495659_0006433 Ga0495659_0006433_1807_3546 515
150 3300013306 Ga0163162_10006993 Ga0163162_100069937 516
151 3300025911 Ga0207654_10039571 Ga0207654_100395712 516
152 3300042184 Ga0450908_002419 Ga0450908_002419_20_1765 516
153 3300001979 JGI24740J21852_10003826 JGI24740J21852_100038262 517
154 3300020078 Ga0206352_10806113 Ga0206352_108061131 517
155 3300020081 Ga0206354_10577805 Ga0206354_105778053 517
156 3300020082 Ga0206353_12056418 Ga0206353_120564182 517
157 3300020610 Ga0154015_1019628 Ga0154015_10196283 517
158 3300025912 Ga0207707_10049980 Ga0207707_100499803 517
159 3300025921 Ga0207652_10052282 Ga0207652_100522822 517
160 3300025944 Ga0207661_10063718 Ga0207661_100637183 517
161 3300026078 Ga0207702_10027248 Ga0207702_100272483 517
162 3300026142 Ga0207698_10001971 Ga0207698_100019717 517
163 3300049570 Ga0501033_0021463 Ga0501033_0021463_2526_4310 518
164 3300049571 Ga0501034_0019666 Ga0501034_0019666_4319_6112 518
165 3300049581 Ga0501047_0038045 Ga0501047_0038045_241_2034 518
166 3300049581 Ga0501047_0113472 Ga0501047_0113472_608_2392 518
167 3300049586 Ga0501070_0011849 Ga0501070_0011849_3785_5569 518
168 3300049586 Ga0501070_0018011 Ga0501070_0018011_3830_5620 518
169 3300049589 Ga0501073_0008994 Ga0501073_0008994_463_2247 518
170 3300049590 Ga0501074_0003429 Ga0501074_0003429_2031_3821 518
171 3300049590 Ga0501074_0003429 Ga0501074_0003429_232_2025 518
172 3300049590 Ga0501074_0039899 Ga0501074_0039899_564_2348 518
173 3300049741 Ga0501079_0085593 Ga0501079_0085593_401_2194 518
174 3300049742 Ga0501080_0002756 Ga0501080_0002756_2431_4221 518
175 3300049742 Ga0501080_0002756 Ga0501080_0002756_4227_6020 518
176 3300049742 Ga0501080_0006906 Ga0501080_0006906_3741_5525 518
177 3300049822 Ga0501035_0017396 Ga0501035_0017396_2261_4051 518
178 3300049822 Ga0501035_0017396 Ga0501035_0017396_4057_5850 518
179 3300005458 Ga0070681_10023870 Ga0070681_100238701 520
180 3300025912 Ga0207707_10000252 Ga0207707_1000025242 520
181 3300005327 Ga0070658_10016978 Ga0070658_100169786 521
182 3300005336 Ga0070680_100033891 Ga0070680_1000338912 521
183 3300005458 Ga0070681_10004215 Ga0070681_100042153 521
184 3300005530 Ga0070679_100001333 Ga0070679_1000013333 521
185 3300005578 Ga0068854_100015855 Ga0068854_1000158552 521
186 3300013100 Ga0157373_10054273 Ga0157373_100542733 521
187 3300013105 Ga0157369_10147018 Ga0157369_101470182 521
188 3300013307 Ga0157372_10002747 Ga0157372_100027473 521
189 3300013307 Ga0157372_10002747 Ga0157372_100027475 521
190 3300025909 Ga0207705_10023545 Ga0207705_100235454 521
191 3300025912 Ga0207707_10009882 Ga0207707_100098823 521
192 3300025913 Ga0207695_10121067 Ga0207695_101210672 521
193 3300025917 Ga0207660_10001016 Ga0207660_1000101613 521
194 3300025921 Ga0207652_10002193 Ga0207652_100021934 521
195 3300025981 Ga0207640_10016864 Ga0207640_100168642 521
196 3300005366 Ga0070659_100080125 Ga0070659_1000801252 522
197 3300005457 Ga0070662_100006965 Ga0070662_1000069653 522
198 3300013100 Ga0157373_10010166 Ga0157373_100101663 522
199 3300025919 Ga0207657_10034901 Ga0207657_100349012 522
200 3300025932 Ga0207690_10038805 Ga0207690_100388052 522
201 3300025933 Ga0207706_10001222 Ga0207706_1000122215 522
202 3300037471 Ga0395905_0004190 Ga0395905_0004190_11631_13403 522
203 3300026121 Ga0207683_10017153 Ga0207683_100171532 523
204 3300031548 Ga0307408_100085386 Ga0307408_1000853862 523
205 3300031731 Ga0307405_10028165 Ga0307405_100281653 523
206 3300031852 Ga0307410_10054795 Ga0307410_100547952 523
207 3300031901 Ga0307406_10080541 Ga0307406_100805412 523
208 3300031995 Ga0307409_100140916 Ga0307409_1001409162 523
209 3300032002 Ga0307416_100110745 Ga0307416_1001107452 523
210 3300032004 Ga0307414_10101717 Ga0307414_101017172 523
211 3300032005 Ga0307411_10066537 Ga0307411_100665372 523
212 3300032126 Ga0307415_100028040 Ga0307415_1000280403 523
213 3300037312 Ga0395899_0078991 Ga0395899_0078991_142_1917 523
214 3300037418 Ga0395900_0142480 Ga0395900_0142480_198_1973 523
215 3300037466 Ga0395898_0100607 Ga0395898_0100607_961_2736 523
216 3300037471 Ga0395905_0097478 Ga0395905_0097478_961_2736 523
217 3300038443 Ga0395901_0070874 Ga0395901_0070874_896_2671 523
218 3300005344 Ga0070661_100043298 Ga0070661_1000432982 524
219 3300005345 Ga0070692_10005492 Ga0070692_100054924 524
220 3300005578 Ga0068854_100049985 Ga0068854_1000499852 524
221 3300006358 Ga0068871_100004211 Ga0068871_1000042113 524
222 3300013105 Ga0157369_10074049 Ga0157369_100740492 524
223 3300025909 Ga0207705_10011743 Ga0207705_100117433 524
224 3300025913 Ga0207695_10004345 Ga0207695_1000434513 524
225 3300025949 Ga0207667_10044792 Ga0207667_100447923 524
226 3300026067 Ga0207678_10024601 Ga0207678_100246013 524
227 3300010375 Ga0105239_10139690 Ga0105239_101396902 525
228 3300025913 Ga0207695_10011895 Ga0207695_100118959 525
229 3300025924 Ga0207694_10005629 Ga0207694_100056292 525
230 3300037312 Ga0395899_0078837 Ga0395899_0078837_405_2192 525
231 3300009553 Ga0105249_10015759 Ga0105249_100157596 526
232 3300013105 Ga0157369_10000090 Ga0157369_1000009022 526
233 3300025961 Ga0207712_10089024 Ga0207712_100890241 526
234 3300006237 Ga0097621_100030907 Ga0097621_1000309072 527
235 3300009551 Ga0105238_10131772 Ga0105238_101317722 527
236 3300046675 Ga0495657_0064274 Ga0495657_0064274_346_2118 527
237 3300049586 Ga0501070_0018312 Ga0501070_0018312_218_2020 528
238 3300049574 Ga0501038_0072690 Ga0501038_0072690_1049_2827 529
239 3300049585 Ga0501069_0031509 Ga0501069_0031509_81_1859 529
240 3300049586 Ga0501070_0011849 Ga0501070_0011849_1940_3718 529
241 3300049742 Ga0501080_0006906 Ga0501080_0006906_1896_3674 529
242 3300049822 Ga0501035_0072645 Ga0501035_0072645_310_2088 529
243 3300049823 Ga0501044_0051573 Ga0501044_0051573_1968_3746 529
244 3300025919 Ga0207657_10029104 Ga0207657_100291044 530
245 3300046675 Ga0495657_0041493 Ga0495657_0041493_34_1842 532
246 3300005340 Ga0070689_100080275 Ga0070689_1000802752 533
247 3300005543 Ga0070672_100006136 Ga0070672_1000061363 533
248 3300005841 Ga0068863_100042273 Ga0068863_1000422732 533
249 3300025940 Ga0207691_10074510 Ga0207691_100745101 533
250 3300026088 Ga0207641_10103394 Ga0207641_101033942 533
251 3300026089 Ga0207648_10009454 Ga0207648_100094542 533
252 3300026121 Ga0207683_10088724 Ga0207683_100887242 533
253 3300032126 Ga0307415_100007804 Ga0307415_1000078044 534
254 3300042122 Ga0450920_000437 Ga0450920_000437_2359_4158 534
255 3300042133 Ga0450896_001694 Ga0450896_001694_651_2450 534
256 3300042147 Ga0450910_002495 Ga0450910_002495_434_2233 534
257 3300042435 Ga0439434_0001228 Ga0439434_0001228_3798_5597 534
258 3300042461 Ga0439460_0006045 Ga0439460_0006045_737_2536 534
259 3300042531 Ga0450918_001892 Ga0450918_001892_1109_2908 534
260 3300001979 JGI24740J21852_10003826 JGI24740J21852_100038263 536
261 3300005327 Ga0070658_10062980 Ga0070658_100629802 536
262 3300005345 Ga0070692_10017506 Ga0070692_100175062 536
263 3300005458 Ga0070681_10004215 Ga0070681_100042154 536
264 3300005530 Ga0070679_100001333 Ga0070679_1000013334 536
265 3300005546 Ga0070696_100034093 Ga0070696_1000340932 536
266 3300005563 Ga0068855_100018766 Ga0068855_1000187662 536
267 3300005577 Ga0068857_100037431 Ga0068857_1000374312 536
268 3300005834 Ga0068851_10030475 Ga0068851_100304752 536
269 3300009093 Ga0105240_10167450 Ga0105240_101674501 536
270 3300013104 Ga0157370_10028228 Ga0157370_100282282 536
271 3300013307 Ga0157372_10002747 Ga0157372_100027474 536
272 3300020070 Ga0206356_10033577 Ga0206356_100335772 536
273 3300020078 Ga0206352_10806113 Ga0206352_108061132 536
274 3300020081 Ga0206354_10577805 Ga0206354_105778054 536
275 3300025904 Ga0207647_10008073 Ga0207647_100080734 536
276 3300025904 Ga0207647_10039005 Ga0207647_100390053 536
277 3300025909 Ga0207705_10010135 Ga0207705_100101353 536
278 3300025909 Ga0207705_10075861 Ga0207705_100758612 536
279 3300025912 Ga0207707_10009882 Ga0207707_100098824 536
280 3300025913 Ga0207695_10024089 Ga0207695_100240893 536
281 3300025917 Ga0207660_10001016 Ga0207660_1000101612 536
282 3300025921 Ga0207652_10002193 Ga0207652_100021935 536
283 3300025945 Ga0207679_10080750 Ga0207679_100807502 536
284 3300025949 Ga0207667_10037642 Ga0207667_100376423 536
285 3300025981 Ga0207640_10005584 Ga0207640_100055843 536
286 3300026041 Ga0207639_10014560 Ga0207639_100145603 536
287 3300026041 Ga0207639_10083442 Ga0207639_100834422 536
288 3300026067 Ga0207678_10047664 Ga0207678_100476642 536
289 3300026142 Ga0207698_10001971 Ga0207698_100019716 536
290 3300049581 Ga0501047_0013144 Ga0501047_0013144_1793_3586 536
291 3300049586 Ga0501070_0005666 Ga0501070_0005666_7094_8887 536
292 3300049587 Ga0501071_0002869 Ga0501071_0002869_5025_6818 536
293 3300049589 Ga0501073_0014029 Ga0501073_0014029_1956_3749 536
294 3300049590 Ga0501074_0014495 Ga0501074_0014495_1232_3025 536
295 3300049742 Ga0501080_0006388 Ga0501080_0006388_2049_3842 536
296 3300001915 JGI24741J21665_1000877 JGI24741J21665_10008774 537
297 3300005564 Ga0070664_100033282 Ga0070664_1000332824 537
298 3300025944 Ga0207661_10013431 Ga0207661_100134313 537

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13676

TIR_2

TIR domain

63

180

0.89

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pLDDT pTM Quality
82.55 0.44 Low
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Predicted Structure (AlphaFold2)

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