F394582

General Info

Members Datasets Scaffolds Average Seq Length
298 205 215 461

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2928121344|2928123633
Length 513
Sequence LIVGGGYAGFYTAWKLEKQLRRGEAEVTMVDPLPYMTYQPFLPEVAAGSIEPRHAVVSPRRHLKHTNVITAKVTGINHAEKKATITPEVGEPWEVDYDIIVVTAGAVSRTFPIPGVADTAIGLKTIEEAVAIRDRVLSNFDKAANLPAGPERDRLLTFTVVGGGFAGIEVFAELRSFASSLLKFYPQLSFEDTHFHLIEAMGRIMPEVKIETSHWVLKNLAERGALVHLDTQLQSAVDGKIELSTGESFESDLIVWTAGVMANPGVVRGGDLPVEERGRIKTRADLRVGTDDDIVEGAWAAGDVSAVPDLSGGGVGGFCVPNAQHAVRQGKLLAKNITAVLRGEEPKNYFHKNMGAVAGLGIGVGVFQSGNLAIKGLPAWFAHRGYHGLAMPSFERKFRVFGGWWNNFWLGRDIVSLSAVQNPREAFETFASRPKPPAEAAAPAAAPAAPAAAEKPARKAPVKRKPKAVAPAEAAAPAAEAPAAEAPAGTGAPTGADDEQAYATPAEEVSANK

Samples

Sample ID Description Type Environment
1 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
2 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
3 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
4 2643221546 Microbacterium sp. Root53 Isolate Unclassified
5 2643221549 Agromyces sp. Root1464 Isolate Unclassified
6 2643221553 Microbacterium sp. Root553 Isolate Unclassified
7 2643221566 Microbacterium sp. Root166 Isolate Unclassified
8 2643221572 Leifsonia sp. Root60 Isolate Unclassified
9 2643221597 Microbacterium sp. Root180 Isolate Unclassified
10 2643221616 Leifsonia sp. Root227 Isolate Unclassified
11 2643221619 Agromyces sp. Root81 Isolate Unclassified
12 2643221630 Microbacterium sp. Root322 Isolate Unclassified
13 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
14 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
15 2643221649 Leifsonia sp. Root4 Isolate Unclassified
16 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
17 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
18 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
19 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
20 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
21 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
22 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
23 2773857759 Microbacterium sp. 1294 Isolate Unclassified
24 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
25 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
26 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
27 2808606372 Agromyces sp. 23-23 Isolate Unclassified
28 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
29 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
30 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
31 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
32 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
33 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
34 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
35 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
36 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
37 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
38 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
39 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
40 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
41 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
42 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
43 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
44 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
45 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
46 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
47 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
48 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
49 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
50 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
51 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
52 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
53 2919069694 Microbacterium sp. 1154 Isolate Unclassified
54 2919395869 Microbacterium resistens 2980 Isolate Unclassified
55 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
56 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
57 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
58 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
59 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
60 2928153084 Leifsonia sp. 563 Isolate Unclassified
61 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
62 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
63 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
64 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
65 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
66 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
67 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
68 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
69 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
70 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
71 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
72 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
73 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
74 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
75 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
76 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
77 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
78 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
79 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
80 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
81 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
82 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
83 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
84 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
85 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
86 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
87 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
88 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
89 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
90 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
91 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
92 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
93 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
94 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
95 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
96 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
97 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
98 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
99 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
100 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
101 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
102 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
103 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
104 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
105 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
106 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
107 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
108 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
114 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
115 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
116 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
117 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
119 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
127 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
128 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
129 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
130 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
131 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
132 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
133 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
134 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
135 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
136 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
137 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
138 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
139 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
140 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
141 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
142 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
143 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
144 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
145 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
146 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
147 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
148 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
149 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
150 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
151 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
152 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
153 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
154 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
155 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
156 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
157 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
158 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
159 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
160 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
161 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
162 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
163 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
164 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
165 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
166 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
167 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
168 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
169 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
170 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
184 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
185 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
186 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
187 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
188 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
189 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
190 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
191 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
192 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
193 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
194 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
195 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
196 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
197 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
198 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
199 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
200 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
201 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
202 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
203 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
204 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
205 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 69.13
Metatranscriptomes 3.02
Isolates 27.85

Biome Distribution

Category Percentage (%)
Aerial Root 1.01
Bulb 0
Endosphere 12.08
Nodule 0
Rhizoplane 6.71
Rhizosphere 44.97
Stem 0
Stem Tuber 0.34
Unclassified 34.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10028907 3300001989 Bacteria 1931
2 JGI24735J21928_10003608 3300002067 Bacteria 5252
3 JGI25154J39366_1001708 3300002738 Bacteria 7190
4 JGI25154J39366_1002503 3300002738 Bacteria 4695
5 JGI25164J39214_1000393 3300002772 Bacteria 25725
6 JGI25165J46597_1000004 3300003214 Bacteria 667510
7 Ga0006562J51391_1029663 3300003578 Bacteria 18830
8 Ga0006562J51391_1029667 3300003578 Bacteria 14190
9 Ga0006562J51391_1047329 3300003578 Bacteria 2984
10 Ga0006562J51391_1047330 3300003578 Bacteria 2774
11 Ga0055539_1000005 3300003752 Bacteria 609598
12 Ga0055533_1000001 3300003756 Bacteria 1863437
13 Ga0055525_1000121 3300003759 Bacteria 119321
14 Ga0055527_1000001 3300003760 Bacteria 850044
15 Ga0055529_1000019 3300003763 Bacteria 332786
16 Ga0055541_1002114 3300003841 Bacteria 4050
17 Ga0070658_10026048 3300005327 Bacteria 4691
18 Ga0070658_10129444 3300005327 Bacteria 2103
19 Ga0070663_100097495 3300005455 Bacteria 2189
20 Ga0070665_100051078 3300005548 Bacteria 4148
21 Ga0075365_10072285 3300006038 Bacteria 2323
22 Ga0075368_10006156 3300006042 Bacteria 4175
23 Ga0075364_10061967 3300006051 Bacteria 2454
24 Ga0075367_10007183 3300006178 Bacteria 5686
25 Ga0105243_10033856 3300009148 Bacteria 3951
26 Ga0157371_10002292 3300013102 Bacteria 18439
27 Ga0157369_10000844 3300013105 Bacteria 39239
28 Ga0157369_10056167 3300013105 Bacteria 4249
29 Ga0157369_10143262 3300013105 Bacteria 2528
30 Ga0171462_1004 3300013250 Bacteria 678877
31 Ga0163162_10292403 3300013306 Bacteria 1761
32 Ga0206356_10376666 3300020070 Bacteria 1472
33 Ga0206349_1917616 3300020075 Bacteria 1637
34 Ga0206355_1373616 3300020076 Bacteria 2214
35 Ga0206354_10994996 3300020081 Bacteria 3403
36 Ga0206353_10586366 3300020082 Bacteria 5321
37 Ga0213875_10053754 3300021388 Bacteria 1886
38 Ga0209566_100065 3300025225 Bacteria 190999
39 Ga0209674_100001 3300025226 Bacteria 4013750
40 Ga0209672_100006 3300025228 Bacteria 1004497
41 Ga0209147_101626 3300025229 Bacteria 7476
42 Ga0209563_100001 3300025230 Bacteria 4013775
43 Ga0209563_100328 3300025230 Bacteria 18557
44 Ga0207427_100010 3300025231 Bacteria 648610
45 Ga0209437_101179 3300025233 Bacteria 7724
46 Ga0209646_1000092 3300025246 Bacteria 185930
47 Ga0209677_100001 3300025253 Bacteria 4013787
48 Ga0209677_101964 3300025253 Bacteria 8198
49 Ga0209148_1000015 3300025254 Bacteria 850103
50 Ga0209233_1000001 3300025261 Bacteria 2992747
51 Ga0209455_1000013 3300025272 Bacteria 850103
52 Ga0207655_1035611 3300025728 Bacteria 2220
53 Ga0207647_10052075 3300025904 Bacteria 2528
54 Ga0207647_10064964 3300025904 Bacteria 2216
55 Ga0207705_10000001 3300025909 Bacteria 2061880
56 Ga0207705_10082516 3300025909 Bacteria 2344
57 Ga0207667_10135278 3300025949 Bacteria 2538
58 Ga0207639_10049893 3300026041 Bacteria 3176
59 Ga0207678_10125068 3300026067 Bacteria 2194
60 Ga0209813_10013419 3300027866 Bacteria 2187
61 Ga0307513_10000126 3300031456 Bacteria 107665
62 Ga0307514_10001362 3300031649 Bacteria 30939
63 Ga0307406_10000065 3300031901 Bacteria 58903
64 Ga0307406_10000250 3300031901 Bacteria 32583
65 Ga0307406_10003902 3300031901 Bacteria 8113
66 Ga0307406_10057228 3300031901 Bacteria 2500
67 Ga0307409_100150723 3300031995 Bacteria 2018
68 Ga0395900_0002567 3300037418 Bacteria 19899
69 Ga0395900_0152556 3300037418 Bacteria 2360
70 Ga0395898_0000015 3300037466 Bacteria 439819
71 Ga0395898_0113481 3300037466 Bacteria 2597
72 Ga0436364_1213592 3300037853 Bacteria 3572
73 Ga0436365_0456495 3300039437 Bacteria 1424
74 Ga0466972_0023365 3300044658 Bacteria 3075
75 Ga0466965_0048436 3300044683 Bacteria 2105
76 Ga0466966_0064560 3300044684 Bacteria 2304
77 Ga0466961_0066602 3300044693 Bacteria 2287
78 Ga0466961_0137697 3300044693 Bacteria 1529
79 Ga0466968_0014905 3300044735 Bacteria 3076
80 Ga0466968_0058908 3300044735 Bacteria 1653
81 Ga0466970_0002884 3300044765 Bacteria 8321
82 Ga0466957_0002202 3300044842 Bacteria 10447
83 Ga0466957_0094358 3300044842 Bacteria 1878
84 Ga0466960_0024907 3300044901 Bacteria 2703
85 Ga0466960_0049921 3300044901 Bacteria 2016
86 Ga0466960_0071265 3300044901 Bacteria 1730
87 Ga0466959_0023695 3300045049 Bacteria 4543
88 Ga0466959_0119686 3300045049 Bacteria 1873
89 Ga0495627_001321 3300046453 Bacteria 15117
90 Ga0495638_0048005 3300046460 Bacteria 2674
91 Ga0495609_0052204 3300046538 Bacteria 1819
92 Ga0496100_0121801 3300048903 Bacteria 1826
93 Ga0496101_0025644 3300048904 Bacteria 4091
94 Ga0496102_0042159 3300048905 Bacteria 4136
95 Ga0496102_0180228 3300048905 Bacteria 1990
96 Ga0496104_0047634 3300048907 Bacteria 4040
97 Ga0496105_0049014 3300048908 Bacteria 3486
98 Ga0496105_0060073 3300048908 Bacteria 3136
99 Ga0496105_0138348 3300048908 Bacteria 2005
100 Ga0496107_0016960 3300048910 Bacteria 5121
101 Ga0496108_0031779 3300048911 Bacteria 4382
102 Ga0496109_0008279 3300048912 Bacteria 8830
103 Ga0496109_0031393 3300048912 Bacteria 4767
104 Ga0496110_0083515 3300048913 Bacteria 2850
105 Ga0496111_0050480 3300048914 Bacteria 3001
106 Ga0496111_0170501 3300048914 Bacteria 1617
107 Ga0496113_0007192 3300048916 Bacteria 7133
108 Ga0496113_0059427 3300048916 Bacteria 2880
109 Ga0496114_0029599 3300048917 Bacteria 4504
110 Ga0496114_0066416 3300048917 Bacteria 3024
111 Ga0496115_0015935 3300048918 Bacteria 5713
112 Ga0496116_0033043 3300048919 Bacteria 3677
113 Ga0496117_0000063 3300048920 Bacteria 254446
114 Ga0496117_0000561 3300048920 Bacteria 61150
115 Ga0496117_0001585 3300048920 Bacteria 32254
116 Ga0496117_0001610 3300048920 Bacteria 31902
117 Ga0496117_0001744 3300048920 Bacteria 29969
118 Ga0496117_0012248 3300048920 Bacteria 7583
119 Ga0496117_0021935 3300048920 Bacteria 5142
120 Ga0496117_0045730 3300048920 Bacteria 3157
121 Ga0496117_0085067 3300048920 Bacteria 2061
122 Ga0496118_0000705 3300048921 Bacteria 54015
123 Ga0496118_0013735 3300048921 Bacteria 7638
124 Ga0496118_0067684 3300048921 Bacteria 2598
125 Ga0496118_0089556 3300048921 Bacteria 2124
126 Ga0496118_0108036 3300048921 Bacteria 1856
127 Ga0496119_0002548 3300048922 Bacteria 19838
128 Ga0496119_0005004 3300048922 Bacteria 12924
129 Ga0496120_0000958 3300048923 Bacteria 39313
130 Ga0496120_0003151 3300048923 Bacteria 15388
131 Ga0496120_0014337 3300048923 Bacteria 5290
132 Ga0496120_0016387 3300048923 Bacteria 4843
133 Ga0496122_0000036 3300048925 Bacteria 312598
134 Ga0496122_0000059 3300048925 Bacteria 247170
135 Ga0496122_0006608 3300048925 Bacteria 13232
136 Ga0496122_0006980 3300048925 Bacteria 12712
137 Ga0496122_0008976 3300048925 Bacteria 10628
138 Ga0496122_0010887 3300048925 Bacteria 9309
139 Ga0496122_0046780 3300048925 Bacteria 3346
140 Ga0496123_0000011 3300048926 Bacteria 493925
141 Ga0496123_0000157 3300048926 Bacteria 137212
142 Ga0496123_0014889 3300048926 Bacteria 6415
143 Ga0496123_0017444 3300048926 Bacteria 5774
144 Ga0496124_0000234 3300048927 Bacteria 108472
145 Ga0496124_0005561 3300048927 Bacteria 14116
146 Ga0496124_0025605 3300048927 Bacteria 5341
147 Ga0496124_0061028 3300048927 Bacteria 3161
148 Ga0496125_0000167 3300048928 Bacteria 147134
149 Ga0496125_0001170 3300048928 Bacteria 39711
150 Ga0496125_0012998 3300048928 Bacteria 8218
151 Ga0496125_0014006 3300048928 Bacteria 7843
152 Ga0496125_0026375 3300048928 Bacteria 5297
153 Ga0496125_0063311 3300048928 Bacteria 2950
154 Ga0496126_0005698 3300048929 Bacteria 14111
155 Ga0496126_0006443 3300048929 Bacteria 13079
156 Ga0496126_0008315 3300048929 Bacteria 11205
157 Ga0496126_0017779 3300048929 Bacteria 7077
158 Ga0496126_0019308 3300048929 Bacteria 6714
159 Ga0496126_0086323 3300048929 Bacteria 2766
160 Ga0496126_0129724 3300048929 Bacteria 2179
161 Ga0501031_0007931 3300049568 Bacteria 6912
162 Ga0501031_0037315 3300049568 Bacteria 3170
163 Ga0501032_0021458 3300049569 Bacteria 4489
164 Ga0501032_0068071 3300049569 Bacteria 2378
165 Ga0501033_0004624 3300049570 Bacteria 11020
166 Ga0501033_0043490 3300049570 Bacteria 3346
167 Ga0501033_0071246 3300049570 Bacteria 2553
168 Ga0501034_0001490 3300049571 Bacteria 30832
169 Ga0501034_0002958 3300049571 Bacteria 19686
170 Ga0501034_0052272 3300049571 Bacteria 4116
171 Ga0501034_0056203 3300049571 Bacteria 3961
172 Ga0501034_0057334 3300049571 Bacteria 3916
173 Ga0501036_0018429 3300049572 Bacteria 5848
174 Ga0501037_0001693 3300049573 Bacteria 16003
175 Ga0501037_0095705 3300049573 Bacteria 2146
176 Ga0501038_0008189 3300049574 Bacteria 9616
177 Ga0501038_0018622 3300049574 Bacteria 6272
178 Ga0501038_0023870 3300049574 Bacteria 5460
179 Ga0501039_0001361 3300049575 Bacteria 17929
180 Ga0501039_0027994 3300049575 Bacteria 4336
181 Ga0501041_0070655 3300049577 Bacteria 2143
182 Ga0501042_0025719 3300049578 Bacteria 4136
183 Ga0501043_0128176 3300049579 Bacteria 1989
184 Ga0501046_0008351 3300049580 Bacteria 9032
185 Ga0501046_0047351 3300049580 Bacteria 3408
186 Ga0501047_0006350 3300049581 Bacteria 11114
187 Ga0501047_0024830 3300049581 Bacteria 5754
188 Ga0501047_0061961 3300049581 Bacteria 3609
189 Ga0501048_0004601 3300049582 Bacteria 10499
190 Ga0501048_0014461 3300049582 Bacteria 5843
191 Ga0501068_0010441 3300049584 Bacteria 5219
192 Ga0501070_0005430 3300049586 Bacteria 10883
193 Ga0501070_0030265 3300049586 Bacteria 4536
194 Ga0501070_0031754 3300049586 Bacteria 4424
195 Ga0501070_0067096 3300049586 Bacteria 2971
196 Ga0501070_0081104 3300049586 Bacteria 2684
197 Ga0501070_0166994 3300049586 Bacteria 1813
198 Ga0501071_0011705 3300049587 Bacteria 5921
199 Ga0501073_0000038 3300049589 Bacteria 86286
200 Ga0501080_0029979 3300049742 Bacteria 5065
201 Ga0501080_0034436 3300049742 Bacteria 4728
202 Ga0501035_0131577 3300049822 Bacteria 2180
203 Ga0501044_0027035 3300049823 Bacteria 6069
204 nmdc:mga00v17_8873_c1 3300050491 Bacteria 5422
205 nmdc:mga06z11_23704_c1 3300050494 Bacteria 2887
206 nmdc:mga08y16_139070_c1 3300050511 Bacteria 2524
207 Ga0500635_0000155 3300053080 Bacteria 37961
208 Ga0500556_0000564 3300053104 Bacteria 24717
209 Ga0500559_0003036 3300053136 Bacteria 8393
210 Ga0500559_0058176 3300053136 Bacteria 1718
211 Ga0500568_0000009 3300053139 Bacteria 270298
212 Ga0500568_0012861 3300053139 Bacteria 3834
213 Ga0500616_0000058 3300053153 Bacteria 266276
214 Ga0500616_0003137 3300053153 Bacteria 12922
215 Ga0466962_0049949 3300061719 Bacteria 1999

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048905 Ga0496102_0180228 Ga0496102_0180228_607_1977 400
2 3300053139 Ga0500568_0012861 Ga0500568_0012861_517_1839 410
3 3300044693 Ga0466961_0137697 Ga0466961_0137697_165_1499 413
4 3300048917 Ga0496114_0066416 Ga0496114_0066416_1705_3012 413
5 3300021388 Ga0213875_10053754 Ga0213875_100537542 420
6 3300037853 Ga0436364_1213592 Ga0436364_1213592_941_2278 420
7 3300039437 Ga0436365_0456495 Ga0436365_0456495_18_1376 421
8 3300031649 Ga0307514_10001362 Ga0307514_1000136217 424
9 3300049568 Ga0501031_0007931 Ga0501031_0007931_1749_3248 426
10 3300049571 Ga0501034_0002958 Ga0501034_0002958_1379_2878 426
11 3300049573 Ga0501037_0001693 Ga0501037_0001693_1324_2823 426
12 3300049574 Ga0501038_0023870 Ga0501038_0023870_1260_2759 426
13 3300049575 Ga0501039_0001361 Ga0501039_0001361_10232_11731 426
14 3300049581 Ga0501047_0024830 Ga0501047_0024830_63_1562 426
15 3300049582 Ga0501048_0014461 Ga0501048_0014461_2271_3770 426
16 3300049584 Ga0501068_0010441 Ga0501068_0010441_1378_2877 426
17 3300049586 Ga0501070_0067096 Ga0501070_0067096_307_1806 426
18 3300046538 Ga0495609_0052204 Ga0495609_0052204_192_1667 429
19 3300048903 Ga0496100_0121801 Ga0496100_0121801_332_1813 429
20 3300048920 Ga0496117_0000561 Ga0496117_0000561_36189_37670 429
21 3300048921 Ga0496118_0000705 Ga0496118_0000705_40910_42391 429
22 3300048925 Ga0496122_0010887 Ga0496122_0010887_2351_3832 429
23 3300048927 Ga0496124_0000234 Ga0496124_0000234_11625_13106 429
24 3300053153 Ga0500616_0000058 Ga0500616_0000058_115314_116840 429
25 iso_pu_bacteria 2643221635 2644198179 429
26 iso_pu_bacteria 2852643534 2852644797 429
27 3300046460 Ga0495638_0048005 Ga0495638_0048005_273_1598 430
28 3300053136 Ga0500559_0058176 Ga0500559_0058176_52_1470 430
29 3300053153 Ga0500616_0003137 Ga0500616_0003137_194_1519 430
30 3300049569 Ga0501032_0068071 Ga0501032_0068071_676_1995 432
31 3300049586 Ga0501070_0166994 Ga0501070_0166994_301_1620 432
32 3300049589 Ga0501073_0000038 Ga0501073_0000038_61462_62781 432
33 3300049742 Ga0501080_0029979 Ga0501080_0029979_3282_4601 432
34 3300005455 Ga0070663_100097495 Ga0070663_1000974952 433
35 3300025909 Ga0207705_10000001 Ga0207705_10000001206 433
36 3300048929 Ga0496126_0086323 Ga0496126_0086323_743_2065 433
37 3300049569 Ga0501032_0021458 Ga0501032_0021458_789_2111 433
38 3300049571 Ga0501034_0056203 Ga0501034_0056203_1159_2481 433
39 3300049571 Ga0501034_0057334 Ga0501034_0057334_511_1833 433
40 3300049573 Ga0501037_0095705 Ga0501037_0095705_729_2051 433
41 3300049575 Ga0501039_0027994 Ga0501039_0027994_560_1882 433
42 3300049586 Ga0501070_0031754 Ga0501070_0031754_620_1942 433
43 3300049586 Ga0501070_0081104 Ga0501070_0081104_601_1923 433
44 3300049587 Ga0501071_0011705 Ga0501071_0011705_563_1885 433
45 3300049742 Ga0501080_0034436 Ga0501080_0034436_306_1706 433
46 3300053136 Ga0500559_0003036 Ga0500559_0003036_6988_8325 433
47 3300013102 Ga0157371_10002292 Ga0157371_1000229212 434
48 3300031456 Ga0307513_10000126 Ga0307513_1000012630 434
49 3300048920 Ga0496117_0001610 Ga0496117_0001610_16893_18431 434
50 3300049823 Ga0501044_0027035 Ga0501044_0027035_4633_6006 434
51 3300013105 Ga0157369_10000844 Ga0157369_1000084437 435
52 3300048908 Ga0496105_0060073 Ga0496105_0060073_1682_3100 435
53 3300048908 Ga0496105_0138348 Ga0496105_0138348_390_1808 435
54 3300048918 Ga0496115_0015935 Ga0496115_0015935_3314_4732 435
55 3300048920 Ga0496117_0001585 Ga0496117_0001585_26772_28292 435
56 3300048922 Ga0496119_0005004 Ga0496119_0005004_7595_9010 435
57 3300048923 Ga0496120_0014337 Ga0496120_0014337_2497_3912 435
58 3300048925 Ga0496122_0000036 Ga0496122_0000036_183266_184681 435
59 3300048926 Ga0496123_0000011 Ga0496123_0000011_183342_184757 435
60 3300048927 Ga0496124_0005561 Ga0496124_0005561_7680_9095 435
61 3300048928 Ga0496125_0012998 Ga0496125_0012998_1974_3389 435
62 3300048928 Ga0496125_0063311 Ga0496125_0063311_625_2145 435
63 3300048929 Ga0496126_0017779 Ga0496126_0017779_1607_3022 435
64 3300049568 Ga0501031_0037315 Ga0501031_0037315_635_2035 435
65 3300049570 Ga0501033_0004624 Ga0501033_0004624_6661_8061 435
66 3300049570 Ga0501033_0071246 Ga0501033_0071246_1101_2486 435
67 3300049572 Ga0501036_0018429 Ga0501036_0018429_4146_5546 435
68 3300049578 Ga0501042_0025719 Ga0501042_0025719_2434_3834 435
69 3300049579 Ga0501043_0128176 Ga0501043_0128176_63_1448 435
70 3300049580 Ga0501046_0008351 Ga0501046_0008351_302_1702 435
71 3300049581 Ga0501047_0006350 Ga0501047_0006350_1087_2487 435
72 3300049582 Ga0501048_0004601 Ga0501048_0004601_1162_2562 435
73 3300049822 Ga0501035_0131577 Ga0501035_0131577_303_1703 435
74 3300053104 Ga0500556_0000564 Ga0500556_0000564_233_1612 435
75 3300053139 Ga0500568_0000009 Ga0500568_0000009_180499_181878 435
76 3300020075 Ga0206349_1917616 Ga0206349_19176161 436
77 3300025904 Ga0207647_10064964 Ga0207647_100649643 436
78 3300025949 Ga0207667_10135278 Ga0207667_101352782 436
79 3300026041 Ga0207639_10049893 Ga0207639_100498932 436
80 3300037466 Ga0395898_0113481 Ga0395898_0113481_1111_2562 436
81 3300048929 Ga0496126_0005698 Ga0496126_0005698_1103_2527 436
82 3300048929 Ga0496126_0019308 Ga0496126_0019308_3964_5478 436
83 iso_pu_bacteria 2906799679 2906803227 436
84 3300005327 Ga0070658_10026048 Ga0070658_100260485 437
85 3300031901 Ga0307406_10000250 Ga0307406_100002502 437
86 3300031901 Ga0307406_10003902 Ga0307406_100039025 437
87 3300046453 Ga0495627_001321 Ga0495627_001321_3583_5112 437
88 3300048925 Ga0496122_0000059 Ga0496122_0000059_129341_130801 437
89 3300048926 Ga0496123_0000157 Ga0496123_0000157_129341_130801 437
90 3300048929 Ga0496126_0008315 Ga0496126_0008315_14_1534 437
91 3300049571 Ga0501034_0001490 Ga0501034_0001490_29335_30738 437
92 3300002738 JGI25154J39366_1001708 JGI25154J39366_10017082 438
93 3300002738 JGI25154J39366_1002503 JGI25154J39366_10025034 438
94 3300002772 JGI25164J39214_1000393 JGI25164J39214_100039316 438
95 3300003214 JGI25165J46597_1000004 JGI25165J46597_1000004177 438
96 3300025231 Ga0207427_100010 Ga0207427_100010404 438
97 3300025233 Ga0209437_101179 Ga0209437_1011792 438
98 3300025246 Ga0209646_1000092 Ga0209646_1000092135 438
99 3300025261 Ga0209233_1000001 Ga0209233_10000011545 438
100 3300026067 Ga0207678_10125068 Ga0207678_101250683 438
101 3300031901 Ga0307406_10057228 Ga0307406_100572282 438
102 3300050511 nmdc:mga08y16_139070_c1 nmdc:mga08y16_139070_c1_487_1947 438
103 3300003578 Ga0006562J51391_1029663 Ga0006562J51391_102966312 439
104 3300003578 Ga0006562J51391_1029667 Ga0006562J51391_102966715 439
105 3300013250 Ga0171462_1004 Ga0171462_100494 439
106 3300031901 Ga0307406_10000065 Ga0307406_1000006516 439
107 3300048921 Ga0496118_0067684 Ga0496118_0067684_158_1684 439
108 3300048925 Ga0496122_0006608 Ga0496122_0006608_6650_8167 439
109 3300048926 Ga0496123_0014889 Ga0496123_0014889_614_2131 439
110 3300049586 Ga0501070_0005430 Ga0501070_0005430_6504_7946 439
111 iso_pu_bacteria 2862993130 2862995140 439
112 iso_pu_bacteria 2964326757 2964328858 439
113 iso_pu_bacteria 2966921586 2966924100 439
114 3300005548 Ga0070665_100051078 Ga0070665_1000510783 440
115 3300006038 Ga0075365_10072285 Ga0075365_100722852 440
116 3300006042 Ga0075368_10006156 Ga0075368_100061563 440
117 3300006178 Ga0075367_10007183 Ga0075367_100071833 440
118 3300013105 Ga0157369_10143262 Ga0157369_101432621 440
119 3300013306 Ga0163162_10292403 Ga0163162_102924033 440
120 3300027866 Ga0209813_10013419 Ga0209813_100134193 440
121 3300031995 Ga0307409_100150723 Ga0307409_1001507232 440
122 3300048904 Ga0496101_0025644 Ga0496101_0025644_2276_3700 440
123 3300048905 Ga0496102_0042159 Ga0496102_0042159_607_2031 440
124 3300048908 Ga0496105_0049014 Ga0496105_0049014_1582_2994 440
125 3300048910 Ga0496107_0016960 Ga0496107_0016960_3064_4488 440
126 3300048911 Ga0496108_0031779 Ga0496108_0031779_1360_2772 440
127 3300048912 Ga0496109_0008279 Ga0496109_0008279_4375_5787 440
128 3300048912 Ga0496109_0031393 Ga0496109_0031393_2077_3501 440
129 3300048913 Ga0496110_0083515 Ga0496110_0083515_65_1477 440
130 3300048914 Ga0496111_0050480 Ga0496111_0050480_311_1735 440
131 3300048914 Ga0496111_0170501 Ga0496111_0170501_119_1531 440
132 3300048916 Ga0496113_0007192 Ga0496113_0007192_3151_4575 440
133 3300048917 Ga0496114_0029599 Ga0496114_0029599_2635_4116 440
134 3300048919 Ga0496116_0033043 Ga0496116_0033043_1669_3129 440
135 3300048920 Ga0496117_0001744 Ga0496117_0001744_2693_4171 440
136 3300048920 Ga0496117_0045730 Ga0496117_0045730_1190_2650 440
137 3300048920 Ga0496117_0085067 Ga0496117_0085067_81_1481 440
138 3300048921 Ga0496118_0013735 Ga0496118_0013735_2441_3919 440
139 3300048922 Ga0496119_0002548 Ga0496119_0002548_9226_10668 440
140 3300048923 Ga0496120_0003151 Ga0496120_0003151_7633_9093 440
141 3300048927 Ga0496124_0025605 Ga0496124_0025605_53_1513 440
142 3300048928 Ga0496125_0000167 Ga0496125_0000167_88575_90089 440
143 3300048928 Ga0496125_0026375 Ga0496125_0026375_2963_4441 440
144 3300049574 Ga0501038_0018622 Ga0501038_0018622_1718_3331 440
145 3300049577 Ga0501041_0070655 Ga0501041_0070655_500_1951 440
146 3300050494 nmdc:mga06z11_23704_c1 nmdc:mga06z11_23704_c1_1050_2456 440
147 iso_pu_bacteria 2643221546 2643752927 440
148 iso_pu_bacteria 2643221572 2643875902 440
149 iso_pu_bacteria 2643221669 2644382957 440
150 iso_pu_bacteria 2751185788 2753301047 440
151 iso_pu_bacteria 2844852863 2844855978 440
152 iso_pu_bacteria 2857723135 2857727039 440
153 iso_pu_bacteria 2870628048 2870630812 440
154 iso_pu_bacteria 2884763398 2884765962 440
155 iso_pu_bacteria 2904430863 2904431051 440
156 iso_pu_bacteria 2904501621 2904503437 440
157 iso_pu_bacteria 2908674828 2908675075 440
158 iso_pu_bacteria 2909074476 2909075599 440
159 iso_pu_bacteria 2919039151 2919039764 440
160 iso_pu_bacteria 2919042368 2919044916 440
161 iso_pu_bacteria 2919395869 2919396087 440
162 iso_pu_bacteria 2919443155 2919446905 440
163 iso_pu_bacteria 2928104781 2928106399 440
164 iso_pu_bacteria 2928500415 2928503072 440
165 iso_pu_bacteria 2966924647 2966925680 440
166 iso_pu_bacteria 2984551494 2984553218 440
167 iso_pu_bacteria 8056037122 8056039856 440
168 iso_pu_bacteria 8057345674 8057348233 440
169 3300025728 Ga0207655_1035611 Ga0207655_10356113 441
170 3300048925 Ga0496122_0046780 Ga0496122_0046780_55_1605 441
171 3300048928 Ga0496125_0014006 Ga0496125_0014006_3349_4899 441
172 iso_pu_bacteria 2585428094 2587864328 441
173 iso_pu_bacteria 2643221549 2643769785 441
174 iso_pu_bacteria 2643221616 2644096827 441
175 iso_pu_bacteria 2643221619 2644114440 441
176 iso_pu_bacteria 2643221632 2644182765 441
177 iso_pu_bacteria 2643221649 2644280307 441
178 iso_pu_bacteria 2721755702 2723641458 441
179 iso_pu_bacteria 2808606368 2808886062 441
180 iso_pu_bacteria 2808606372 2808901404 441
181 iso_pu_bacteria 2844841374 2844842968 441
182 iso_pu_bacteria 2857729791 2857730390 441
183 iso_pu_bacteria 2895660088 2895663583 441
184 iso_pu_bacteria 2919055335 2919058949 441
185 iso_pu_bacteria 2919523602 2919525063 441
186 iso_pu_bacteria 2928121344 2928123633 441
187 iso_pu_bacteria 2928153084 2928156736 441
188 iso_pu_bacteria 2935409751 2935410879 441
189 iso_pu_bacteria 2939660829 2939663040 441
190 iso_pu_bacteria 2977251589 2977254428 441
191 iso_pu_bacteria 8046352972 8046353459 441
192 3300006051 Ga0075364_10061967 Ga0075364_100619672 442
193 3300044683 Ga0466965_0048436 Ga0466965_0048436_667_2076 442
194 3300044735 Ga0466968_0058908 Ga0466968_0058908_233_1642 442
195 3300044901 Ga0466960_0049921 Ga0466960_0049921_95_1504 442
196 3300045049 Ga0466959_0119686 Ga0466959_0119686_223_1632 442
197 3300048921 Ga0496118_0089556 Ga0496118_0089556_463_1854 442
198 3300048921 Ga0496118_0108036 Ga0496118_0108036_128_1678 442
199 3300049586 Ga0501070_0030265 Ga0501070_0030265_2864_4306 442
200 3300050491 nmdc:mga00v17_8873_c1 nmdc:mga00v17_8873_c1_2169_3722 442
201 iso_pu_bacteria 2773857759 2774384043 442
202 iso_pu_bacteria 2811994872 2812323777 442
203 3300005327 Ga0070658_10129444 Ga0070658_101294441 443
204 3300020070 Ga0206356_10376666 Ga0206356_103766661 443
205 3300020081 Ga0206354_10994996 Ga0206354_109949963 443
206 3300020082 Ga0206353_10586366 Ga0206353_105863665 443
207 3300025253 Ga0209677_101964 Ga0209677_1019647 443
208 3300025909 Ga0207705_10082516 Ga0207705_100825162 443
209 3300048920 Ga0496117_0000063 Ga0496117_0000063_177941_179335 443
210 3300048923 Ga0496120_0000958 Ga0496120_0000958_4706_6100 443
211 3300048923 Ga0496120_0016387 Ga0496120_0016387_839_2233 443
212 3300048925 Ga0496122_0008976 Ga0496122_0008976_159_1553 443
213 3300048926 Ga0496123_0017444 Ga0496123_0017444_1158_2552 443
214 3300048927 Ga0496124_0061028 Ga0496124_0061028_1567_2961 443
215 3300048928 Ga0496125_0001170 Ga0496125_0001170_32551_33945 443
216 3300048929 Ga0496126_0006443 Ga0496126_0006443_5298_6692 443
217 iso_pu_bacteria 2585428157 2588108687 443
218 iso_pu_bacteria 2643221542 2643732134 443
219 iso_pu_bacteria 2643221566 2643849211 443
220 iso_pu_bacteria 2643221597 2643995427 443
221 iso_pu_bacteria 2643221630 2644170947 443
222 iso_pu_bacteria 2643221724 2644679430 443
223 iso_pu_bacteria 2728369380 2730228938 443
224 iso_pu_bacteria 2757320536 2758226575 443
225 iso_pu_bacteria 2773857758 2774379943 443
226 iso_pu_bacteria 2773857763 2774398956 443
227 iso_pu_bacteria 2808606306 2808630736 443
228 iso_pu_bacteria 2808606447 2809227833 443
229 iso_pu_bacteria 2852632344 2852634590 443
230 iso_pu_bacteria 2852663356 2852664514 443
231 iso_pu_bacteria 2904509784 2904511542 443
232 iso_pu_bacteria 2908678064 2908680481 443
233 iso_pu_bacteria 2919069694 2919072032 443
234 iso_pu_bacteria 2946041624 2946043437 443
235 iso_pu_bacteria 2974294766 2974297623 443
236 iso_pu_bacteria 2974324384 2974326141 443
237 iso_pu_bacteria 2977228692 2977231860 443
238 iso_pu_bacteria 2977236895 2977237217 443
239 iso_pu_bacteria 2977264416 2977267175 443
240 iso_pu_bacteria 2984542743 2984544994 443
241 iso_pu_bacteria 8016254467 8016257111 443
242 iso_pu_bacteria 8045830549 8045830747 443
243 3300003760 Ga0055527_1000001 Ga0055527_1000001798 444
244 3300003763 Ga0055529_1000019 Ga0055529_1000019304 444
245 3300025228 Ga0209672_100006 Ga0209672_100006177 444
246 3300025229 Ga0209147_101626 Ga0209147_1016265 444
247 3300025254 Ga0209148_1000015 Ga0209148_100001521 444
248 3300025272 Ga0209455_1000013 Ga0209455_100001321 444
249 3300048920 Ga0496117_0021935 Ga0496117_0021935_3322_4731 444
250 3300048925 Ga0496122_0006980 Ga0496122_0006980_6218_7627 444
251 3300049574 Ga0501038_0008189 Ga0501038_0008189_8031_9578 444
252 3300053080 Ga0500635_0000155 Ga0500635_0000155_26_1444 444
253 iso_pu_bacteria 2643221553 2643785093 444
254 iso_pu_bacteria 2821268502 2821270477 444
255 iso_pu_bacteria 2857720070 2857722026 444
256 iso_pu_bacteria 2928090899 2928091712 444
257 iso_pu_bacteria 2945968032 2945971092 444
258 iso_pu_bacteria 2984580707 2984581530 444
259 3300001989 JGI24739J22299_10028907 JGI24739J22299_100289072 445
260 3300002067 JGI24735J21928_10003608 JGI24735J21928_100036085 445
261 3300003578 Ga0006562J51391_1047329 Ga0006562J51391_10473292 445
262 3300003578 Ga0006562J51391_1047330 Ga0006562J51391_10473301 445
263 3300003752 Ga0055539_1000005 Ga0055539_1000005253 445
264 3300003756 Ga0055533_1000001 Ga0055533_10000011322 445
265 3300003759 Ga0055525_1000121 Ga0055525_100012175 445
266 3300003841 Ga0055541_1002114 Ga0055541_10021142 445
267 3300009148 Ga0105243_10033856 Ga0105243_100338563 445
268 3300013105 Ga0157369_10056167 Ga0157369_100561673 445
269 3300020076 Ga0206355_1373616 Ga0206355_13736162 445
270 3300025225 Ga0209566_100065 Ga0209566_10006594 445
271 3300025226 Ga0209674_100001 Ga0209674_1000011322 445
272 3300025230 Ga0209563_100001 Ga0209563_1000011322 445
273 3300025230 Ga0209563_100328 Ga0209563_10032813 445
274 3300025253 Ga0209677_100001 Ga0209677_1000011322 445
275 3300025904 Ga0207647_10052075 Ga0207647_100520752 445
276 3300037418 Ga0395900_0002567 Ga0395900_0002567_9803_11206 445
277 3300037418 Ga0395900_0152556 Ga0395900_0152556_310_1728 445
278 3300037466 Ga0395898_0000015 Ga0395898_0000015_374589_375992 445
279 3300044658 Ga0466972_0023365 Ga0466972_0023365_1375_2790 445
280 3300044684 Ga0466966_0064560 Ga0466966_0064560_50_1465 445
281 3300044693 Ga0466961_0066602 Ga0466961_0066602_443_1858 445
282 3300044735 Ga0466968_0014905 Ga0466968_0014905_1624_3039 445
283 3300044765 Ga0466970_0002884 Ga0466970_0002884_6833_8248 445
284 3300044842 Ga0466957_0002202 Ga0466957_0002202_7171_8586 445
285 3300044842 Ga0466957_0094358 Ga0466957_0094358_428_1843 445
286 3300044901 Ga0466960_0024907 Ga0466960_0024907_172_1587 445
287 3300044901 Ga0466960_0071265 Ga0466960_0071265_303_1718 445
288 3300045049 Ga0466959_0023695 Ga0466959_0023695_202_1617 445
289 3300048907 Ga0496104_0047634 Ga0496104_0047634_2040_3449 445
290 3300048916 Ga0496113_0059427 Ga0496113_0059427_1217_2632 445
291 3300048920 Ga0496117_0012248 Ga0496117_0012248_3740_5155 445
292 3300048929 Ga0496126_0129724 Ga0496126_0129724_707_2116 445
293 3300049570 Ga0501033_0043490 Ga0501033_0043490_174_1595 445
294 3300049571 Ga0501034_0052272 Ga0501034_0052272_766_2187 445
295 3300049580 Ga0501046_0047351 Ga0501046_0047351_235_1656 445
296 3300049581 Ga0501047_0061961 Ga0501047_0061961_1402_2823 445
297 3300061719 Ga0466962_0049949 Ga0466962_0049949_497_1912 445
298 iso_pu_bacteria 8004182704 8004183771 445

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

1

330

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
5kmp-assembly1.cif.gz_A the structure of g164e variant of type ii nadh dehydrogenase from caldalkalibacillus thermarum 0.8984 1 388
5kmq-assembly1.cif.gz_B the structure of i379e variant of type ii nadh dehydrogenase from caldalkalibacillus thermarum 0.8908 1 395
5na1-assembly1.cif.gz_A nadh:quinone oxidoreductase (ndh-ii) from staphylococcus aureus - holoprotein structure - 2.32 a resolution 0.8872 1 398
4nwz-assembly1.cif.gz_A structure of bacterial type ii nadh dehydrogenase from caldalkalibacillus thermarum at 2.5a resolution 0.8854 1 401
5na4-assembly1.cif.gz_A nadh:quinone oxidoreductase (ndh-ii) from staphylococcus aureus - e172s mutant 0.8848 1 398
ID Description Score Start End Superfamily
af_Q55CD9_31_450_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.9124 2 414 3.50.50.100
af_Q6YZ09_48_354_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.8946 2 263 3.50.50.100
af_Q4DCU2_5_434_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.8933 2 413 3.50.50.100
5kmpB00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.8925 1 395 3.50.50.100
af_Q55CD9_31_450_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.8914 2 414 3.50.50.100
ID Description Score Start End GO Terms
AF-A0A7K0RBD7-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9657 1 193 GO:0003954
GO:0006116
AF-A0A7K0YLD5-F1-model_v4 deleted 0.9649 1 227
AF-A0A6B3C9H8-F1-model_v4 FAD-dependent oxidoreductase 0.9647 154 289 GO:0003954
GO:0006116
AF-J3JIQ0-F1-model_v4 Pyridine nucleotide-disulfide oxidoreductase 0.9621 2 429 GO:0003954
GO:0006116
AF-A0A7C6VAV1-F1-model_v4 FAD-dependent oxidoreductase 0.9594 1 347 GO:0003954
GO:0006116

Feature Viewer

pLDDT pTM Quality
88.35 0.85 High
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Predicted Structure (AlphaFold2)

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