F394663

General Info

Members Datasets Scaffolds Average Seq Length
299 161 599 432

Family's Representative Sequence

Representative Sequence 3300005336|Ga0070680_100011630|Ga0070680_1000116306
Length 485
Sequence MAGSHDFLFGKGNITLPWRAKSIDLKKNKYLCLANWASTMNLVIFTSQHRTAIRKFFLLAVLLAVQSIAYSQVMVPTDSLKADSLGKKGKKISKRAEDLSNEYDFGDLLGDILLKKKSHTSHKSSGITVVPNVAANPTIGEQLGIKAVAGRRLGDDPNTLLSVAATSASITTKGILYFYVNHNVFTPGNKWNLQGNLVIARTVTPDFGLGIGRTVTNDSQTDEILANPTHKVFTLHSLYFNAREKIYKEVAKNLFLGAGMSAEVRGDIDQKDTVNNATPMSVYNNKHGFPQDHYVSSGFLFNVQYTSRDNPNRAYKGMYFDAGIRINQTWVGSTKNAVQFTTDLRKYISLSDVSPETVLALWNWGSYLVSGTIPYLELPGTARDGSFRSGRGYTSQYFKGTEFNDTEAEFRFPILKNKFISGVIFGSMQTANDEQGTKLFQVLQPGGGAGLRVLFNKTTRTNLALDYAWGKFGNRGFFLNLNESF

Samples

Sample ID Description Type Environment
1 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
7 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
8 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
9 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
10 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
15 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
16 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
17 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
18 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
52 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
66 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
67 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
68 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
69 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
70 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
71 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
102 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
103 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
104 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
105 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
106 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
107 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
108 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
109 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
110 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
111 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
112 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
113 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
114 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
115 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
116 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
117 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
118 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
119 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
120 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
121 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
122 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
123 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
124 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
125 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
126 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
127 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
128 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
129 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
130 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
131 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
132 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
133 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
134 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
135 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
136 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
137 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
138 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
139 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
140 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
141 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
142 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
143 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
144 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
145 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
146 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
147 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
148 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
149 2738541284 Pedobacter sp. YR016 Isolate Unclassified
150 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
151 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
152 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
153 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
154 2914759650 Rhizosphaericola mali Isolate Rhizosphere
155 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
156 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
157 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
158 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
159 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
160 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
161 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.32
Metatranscriptomes 0
Isolates 4.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.36
Nodule 0
Rhizoplane 0.33
Rhizosphere 79.26
Stem 0
Stem Tuber 0
Unclassified 8.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070680_100011630 3300005336 Bacteria 6818
2 SwRhRL2b_contig_1307791 2162886007 Bacteria 24587
3 JGI24740J21852_10004957 3300001979 Bacteria 5660
4 JGI24740J21852_10035309 3300001979 Unclassified 1565
5 JGI24737J22298_10000022 3300001990 Bacteria 45529
6 JGI24737J22298_10027154 3300001990 Bacteria 1806
7 JGI24735J21928_10000031 3300002067 Bacteria 75354
8 JGI24735J21928_10014660 3300002067 Bacteria 2454
9 JGI25162J39368_1000108 3300002737 Bacteria 90272
10 JGI25162J39368_1001282 3300002737 Bacteria 14251
11 JGI25154J39366_1000065 3300002738 Bacteria 104126
12 JGI25164J39214_1002209 3300002772 Bacteria 3211
13 JGI25165J46597_1000899 3300003214 Bacteria 20681
14 rootH1_10000675 3300003316 Bacteria 8904
15 rootH2_10007289 3300003320 Bacteria 23271
16 rootH2_10018543 3300003320 Bacteria 23020
17 rootH2_10024181 3300003320 Bacteria 12271
18 rootH2_10050245 3300003320 Bacteria 4734
19 rootH2_10056261 3300003320 Bacteria 14958
20 rootH2_10101933 3300003320 Bacteria 7659
21 rootH2_10151451 3300003320 Bacteria 2733
22 rootL2_10084514 3300003322 Bacteria 6814
23 rootH1_10006177 3300003323 Bacteria 7966
24 rootH1_10008697 3300003323 Bacteria 8679
25 rootH1_10023196 3300003316 Bacteria 5733
26 rootH1_10023196 3300003323 Bacteria 10231
27 rootH1_10028571 3300003323 Bacteria 20032
28 JGI25160J50197_1002464 3300003354 Bacteria 8610
29 Ga0055531_10001134 3300003794 Bacteria 20604
30 Ga0065714_10002527 3300005288 Bacteria 43361
31 Ga0065714_10074170 3300005288 Bacteria 3075
32 Ga0065704_10000217 3300005289 Bacteria 101781
33 Ga0070670_100157517 3300005331 Bacteria 1967
34 Ga0068868_100007238 3300005338 Bacteria 7888
35 Ga0068868_100253109 3300005338 Bacteria 1483
36 Ga0070673_100057287 3300005364 Bacteria 3078
37 Ga0070673_100160119 3300005364 Unclassified 1914
38 Ga0070659_100002519 3300005366 Bacteria 13010
39 Ga0070659_100254373 3300005366 Bacteria 1456
40 Ga0070667_100016206 3300005367 Bacteria 6166
41 Ga0070667_100054709 3300005367 Bacteria 3370
42 Ga0070681_10003297 3300005458 Bacteria 15070
43 Ga0070681_10065327 3300005458 Bacteria 3607
44 Ga0070679_100009590 3300005530 Bacteria 9156
45 Ga0068853_100001291 3300005539 Bacteria 17981
46 Ga0068853_100063504 3300005539 Bacteria 3199
47 Ga0070672_100214087 3300005543 Unclassified 1615
48 Ga0070665_100002043 3300005548 Bacteria 22717
49 Ga0068855_100000033 3300005563 Bacteria 167299
50 Ga0068855_100000071 3300005563 Bacteria 122638
51 Ga0068855_100112970 3300005563 Bacteria 3117
52 Ga0068855_100118342 3300005563 Bacteria 3034
53 Ga0068855_100321180 3300005563 Bacteria 1711
54 Ga0068857_100009507 3300005577 Bacteria 8442
55 Ga0068854_100024000 3300005578 Bacteria 4170
56 Ga0068854_100030031 3300005578 Unclassified 3767
57 Ga0068856_100000005 3300005614 Bacteria 225505
58 Ga0068856_100051008 3300005614 Unclassified 4080
59 Ga0068856_100257253 3300005614 Bacteria 1761
60 Ga0068852_100002761 3300005616 Bacteria 12162
61 Ga0068859_100000029 3300005617 Bacteria 178422
62 Ga0068859_100122730 3300005617 Unclassified 2665
63 Ga0068864_100007510 3300005618 Bacteria 8981
64 Ga0068851_10026392 3300005834 Bacteria 2854
65 Ga0068863_100001061 3300005841 Bacteria 27480
66 Ga0068863_100003266 3300005841 Bacteria 16010
67 Ga0068860_100000059 3300005843 Bacteria 196400
68 Ga0068860_100003333 3300005843 Bacteria 16537
69 Ga0068860_100011028 3300005843 Bacteria 8911
70 Ga0075366_10000091 3300006195 Bacteria 36066
71 Ga0097621_100026014 3300006237 Bacteria 4586
72 Ga0097621_100129396 3300006237 Unclassified 2147
73 Ga0068871_100007108 3300006358 Bacteria 7980
74 Ga0068871_100125826 3300006358 Unclassified 2169
75 Ga0097620_100000029 3300006931 Bacteria 178422
76 Ga0097620_100122724 3300006931 Unclassified 2665
77 Ga0105240_10002354 3300009093 Bacteria 30496
78 Ga0105240_10009313 3300009093 Bacteria 13924
79 Ga0105240_10011579 3300009093 Bacteria 12272
80 Ga0105240_10019879 3300009093 Bacteria 8970
81 Ga0105240_10039479 3300009093 Bacteria 6044
82 Ga0105240_10082072 3300009093 Bacteria 3959
83 Ga0105245_10058766 3300009098 Bacteria 3461
84 Ga0105247_10018440 3300009101 Bacteria 4185
85 Ga0105241_10000432 3300009174 Bacteria 31648
86 Ga0105241_10048913 3300009174 Bacteria 3219
87 Ga0105241_10056753 3300009174 Bacteria 3002
88 Ga0105241_10104338 3300009174 Unclassified 2258
89 Ga0105241_10107144 3300009174 Bacteria 2232
90 Ga0105237_10000128 3300009545 Bacteria 106338
91 Ga0105237_10000143 3300009545 Bacteria 101515
92 Ga0105237_10001131 3300009545 Bacteria 35787
93 Ga0105237_10001817 3300009545 Bacteria 27514
94 Ga0105237_10002076 3300009545 Bacteria 25338
95 Ga0105237_10004189 3300009545 Bacteria 16795
96 Ga0105237_10006146 3300009545 Bacteria 13419
97 Ga0105237_10015751 3300009545 Bacteria 7863
98 Ga0105237_10028541 3300009545 Bacteria 5683
99 Ga0105237_10030737 3300009545 Bacteria 5452
100 Ga0105238_10011726 3300009551 Bacteria 8835
101 Ga0105238_10023664 3300009551 Bacteria 6259
102 Ga0105249_10001545 3300009553 Bacteria 20197
103 Ga0105239_10000008 3300010375 Bacteria 376925
104 Ga0105239_10000059 3300010375 Bacteria 155685
105 Ga0105239_10000071 3300010375 Bacteria 143060
106 Ga0105239_10003259 3300010375 Bacteria 20034
107 Ga0105239_10005273 3300010375 Bacteria 15194
108 Ga0105239_10022361 3300010375 Bacteria 6972
109 Ga0105239_10025766 3300010375 Bacteria 6477
110 Ga0105239_10028391 3300010375 Bacteria 6155
111 Ga0105239_10090011 3300010375 Bacteria 3385
112 Ga0105246_10015143 3300011119 Bacteria 4863
113 Ga0157373_10000041 3300013100 Bacteria 113871
114 Ga0157373_10001855 3300013100 Bacteria 16047
115 Ga0157373_10005651 3300013100 Bacteria 9370
116 Ga0157371_10000836 3300013102 Bacteria 35185
117 Ga0157371_10000942 3300013102 Bacteria 32494
118 Ga0157371_10001078 3300013102 Bacteria 29528
119 Ga0157371_10001357 3300013102 Bacteria 25727
120 Ga0157371_10134345 3300013102 Unclassified 1761
121 Ga0157370_10012666 3300013104 Bacteria 8733
122 Ga0157370_10026527 3300013104 Bacteria 5719
123 Ga0157370_10042280 3300013104 Unclassified 4393
124 Ga0157370_10085708 3300013104 Bacteria 2960
125 Ga0157369_10000551 3300013105 Bacteria 49137
126 Ga0157369_10109540 3300013105 Bacteria 2936
127 Ga0157369_10165862 3300013105 Bacteria 2329
128 Ga0157374_10000009 3300013296 Bacteria 564330
129 Ga0157374_10079927 3300013296 Bacteria 3099
130 Ga0157378_10016455 3300013297 Bacteria 6477
131 Ga0157378_10019542 3300013297 Bacteria 5956
132 Ga0157378_10046434 3300013297 Unclassified 3861
133 Ga0163162_10000245 3300013306 Bacteria 49190
134 Ga0163162_10000396 3300013306 Bacteria 39981
135 Ga0163162_10006902 3300013306 Bacteria 11014
136 Ga0157372_10000017 3300013307 Bacteria 219543
137 Ga0157372_10000158 3300013307 Bacteria 73709
138 Ga0157372_10000555 3300013307 Bacteria 41074
139 Ga0157372_10022151 3300013307 Bacteria 6873
140 Ga0157372_10175002 3300013307 Bacteria 2484
141 Ga0157372_10311878 3300013307 Unclassified 1831
142 Ga0157375_10012275 3300013308 Bacteria 7597
143 Ga0157375_10026804 3300013308 Bacteria 5378
144 Ga0157375_10052680 3300013308 Bacteria 4001
145 Ga0163163_10208098 3300014325 Bacteria 2005
146 Ga0182008_10001429 3300014497 Bacteria 16012
147 Ga0157379_10211168 3300014968 Bacteria 1757
148 Ga0157376_10000710 3300014969 Bacteria 21549
149 Ga0157376_10004371 3300014969 Bacteria 9831
150 Ga0157376_10153539 3300014969 Unclassified 2079
151 Ga0163161_10022698 3300017792 Bacteria 4420
152 Ga0207427_100110 3300025231 Bacteria 113735
153 Ga0209437_100093 3300025233 Bacteria 239733
154 Ga0209437_100237 3300025233 Bacteria 90448
155 Ga0209646_1000002 3300025246 Bacteria 1425781
156 Ga0209026_1000216 3300025250 Bacteria 79756
157 Ga0209026_1000850 3300025250 Bacteria 16025
158 Ga0209026_1004211 3300025250 Bacteria 4380
159 Ga0209233_1000089 3300025261 Bacteria 316381
160 Ga0207426_1000002 3300025302 Bacteria 1249660
161 Ga0207426_1000236 3300025302 Bacteria 125348
162 Ga0209257_1000025 3300025304 Bacteria 724838
163 Ga0207680_10000016 3300025903 Bacteria 134657
164 Ga0207647_10000135 3300025904 Bacteria 58247
165 Ga0207647_10024839 3300025904 Bacteria 3947
166 Ga0207705_10044553 3300025909 Bacteria 3188
167 Ga0207654_10004141 3300025911 Bacteria 7310
168 Ga0207707_10090201 3300025912 Bacteria 2679
169 Ga0207695_10000446 3300025913 Bacteria 90493
170 Ga0207695_10028571 3300025913 Bacteria 6179
171 Ga0207695_10058172 3300025913 Bacteria 4013
172 Ga0207695_10182060 3300025913 Bacteria 2022
173 Ga0207695_10257668 3300025913 Bacteria 1643
174 Ga0207671_10000778 3300025914 Bacteria 40392
175 Ga0207671_10000968 3300025914 Bacteria 35551
176 Ga0207671_10001329 3300025914 Bacteria 28904
177 Ga0207671_10001567 3300025914 Bacteria 26106
178 Ga0207671_10002966 3300025914 Bacteria 17440
179 Ga0207671_10003356 3300025914 Bacteria 16059
180 Ga0207671_10008382 3300025914 Bacteria 8773
181 Ga0207671_10013833 3300025914 Bacteria 6408
182 Ga0207671_10197616 3300025914 Unclassified 1570
183 Ga0207652_10013573 3300025921 Bacteria 6589
184 Ga0207694_10023892 3300025924 Bacteria 4642
185 Ga0207650_10019481 3300025925 Bacteria 4768
186 Ga0207687_10091444 3300025927 Bacteria 2219
187 Ga0207644_10067343 3300025931 Bacteria 2610
188 Ga0207704_10123261 3300025938 Unclassified 1779
189 Ga0207691_10180644 3300025940 Unclassified 1844
190 Ga0207689_10000339 3300025942 Bacteria 43619
191 Ga0207667_10000046 3300025949 Bacteria 245420
192 Ga0207667_10000635 3300025949 Bacteria 45483
193 Ga0207667_10011398 3300025949 Bacteria 10335
194 Ga0207667_10314708 3300025949 Bacteria 1599
195 Ga0207651_10247978 3300025960 Unclassified 1455
196 Ga0207712_10021130 3300025961 Bacteria 4270
197 Ga0207640_10078362 3300025981 Unclassified 2249
198 Ga0207640_10181482 3300025981 Bacteria 1578
199 Ga0207658_10016240 3300025986 Bacteria 5119
200 Ga0207658_10024228 3300025986 Unclassified 4244
201 Ga0207703_10077458 3300026035 Unclassified 2760
202 Ga0207703_10286472 3300026035 Unclassified 1498
203 Ga0207639_10009587 3300026041 Bacteria 6685
204 Ga0207639_10101380 3300026041 Bacteria 2328
205 Ga0207702_10000249 3300026078 Bacteria 62542
206 Ga0207702_10200453 3300026078 Bacteria 1849
207 Ga0207702_10224269 3300026078 Bacteria 1753
208 Ga0207641_10000244 3300026088 Bacteria 70430
209 Ga0207641_10018608 3300026088 Bacteria 5695
210 Ga0207676_10005312 3300026095 Bacteria 9124
211 Ga0207674_10040595 3300026116 Bacteria 4820
212 Ga0207698_10004150 3300026142 Bacteria 8802
213 Ga0207698_10009109 3300026142 Bacteria 6308
214 Ga0268266_10000016 3300028379 Bacteria 629101
215 Ga0268264_10000015 3300028381 Bacteria 508501
216 Ga0268264_10005467 3300028381 Bacteria 10770
217 Ga0307517_10005985 3300028786 Bacteria 18144
218 Ga0307515_10000493 3300028794 Bacteria 94441
219 Ga0307515_10000667 3300028794 Bacteria 79135
220 Ga0307515_10000790 3300028794 Bacteria 72891
221 Ga0265338_10046326 3300028800 Bacteria 3986
222 Ga0307511_10000418 3300030521 Bacteria 45353
223 Ga0316177_1064769 3300030731 Bacteria 16424
224 Ga0316176_1167703 3300030732 Bacteria 11141
225 Ga0316181_1051489 3300030744 Bacteria 7497
226 Ga0307509_10040850 3300031507 Bacteria 5041
227 Ga0307509_10221220 3300031507 Bacteria 1706
228 Ga0307516_10006387 3300031730 Bacteria 13819
229 Ga0307516_10099871 3300031730 Bacteria 2718
230 Ga0307412_10000033 3300031911 Bacteria 206649
231 Ga0307510_10000042 3300033180 Bacteria 100951
232 Ga0307510_10000774 3300033180 Bacteria 33030
233 Ga0395899_0000017 3300037312 Bacteria 440179
234 Ga0395899_0000267 3300037312 Bacteria 68362
235 Ga0466961_0118359 3300044693 Bacteria 1664
236 Ga0466959_0000501 3300045049 Bacteria 22709
237 Ga0466958_0014309 3300045836 Bacteria 4531
238 Ga0466958_0080664 3300045836 Unclassified 2002
239 Ga0495651_0058786 3300046462 Bacteria 2949
240 Ga0495650_0000098 3300046471 Bacteria 215716
241 Ga0495585_0000029 3300046492 Bacteria 145822
242 Ga0495606_0000021 3300046507 Bacteria 271238
243 Ga0495606_0000322 3300046507 Bacteria 82446
244 Ga0495606_0036661 3300046507 Bacteria 3338
245 Ga0495606_0079675 3300046507 Bacteria 2039
246 Ga0495610_0001345 3300046512 Bacteria 21797
247 Ga0495616_0000972 3300046513 Bacteria 20531
248 Ga0495631_0013068 3300046518 Bacteria 4038
249 Ga0495648_0002284 3300046524 Bacteria 17886
250 Ga0495652_0072668 3300046529 Bacteria 2866
251 Ga0495609_0008175 3300046538 Bacteria 5140
252 Ga0495609_0029496 3300046538 Unclassified 2498
253 Ga0495609_0068104 3300046538 Bacteria 1567
254 Ga0495622_0018464 3300046557 Bacteria 3248
255 Ga0495633_0000275 3300046558 Bacteria 60032
256 Ga0495633_0005737 3300046558 Bacteria 7506
257 Ga0495668_0000017 3300046616 Bacteria 434025
258 Ga0495625_0000435 3300046660 Bacteria 62758
259 Ga0495625_0001213 3300046660 Bacteria 32692
260 Ga0495625_0001390 3300046660 Bacteria 29676
261 Ga0495625_0018957 3300046660 Bacteria 5354
262 Ga0495661_0000702 3300046665 Bacteria 33210
263 Ga0495661_0022788 3300046665 Bacteria 4071
264 Ga0495649_0000226 3300046694 Bacteria 49102
265 Ga0495672_0018693 3300047320 Bacteria 4591
266 Ga0495687_000004 3300047443 Bacteria 779298
267 Ga0495687_001385 3300047443 Bacteria 22382
268 Ga0495687_035490 3300047443 Bacteria 2241
269 Ga0495673_0020610 3300047469 Bacteria 3280
270 Ga0495686_0000128 3300047472 Bacteria 156223
271 Ga0495686_0002904 3300047472 Bacteria 15390
272 Ga0495686_0029883 3300047472 Bacteria 3542
273 Ga0496122_0005356 3300048925 Bacteria 15325
274 Ga0496123_0009042 3300048926 Bacteria 9030
275 Ga0496126_0033313 3300048929 Bacteria 4847
276 Ga0495682_0032502 3300049460 Bacteria 1927
277 Ga0501241_001133 3300049758 Bacteria 5573
278 nmdc:mga0k408_36764_c1 3300050493 Bacteria 2811
279 nmdc:mga0k408_490_c1 3300050493 Bacteria 21695
280 Ga0500635_0001281 3300053080 Bacteria 6004
281 Ga0500646_0006539 3300053090 Unclassified 2965
282 Ga0500608_000428 3300053122 Bacteria 15994
283 Ga0500608_031700 3300053122 Bacteria 2510
284 Ga0500618_000539 3300053125 Bacteria 23530
285 Ga0500622_0002896 3300053156 Bacteria 11968
286 Ga0466962_0003268 3300061719 Bacteria 7701
287 2599481351 2599185184 Bacteria 6430550
288 2738761196 2738541284 Bacteria 5199923
289 2842906285 2842903701 Bacteria 6986368
290 2852626461 2852623160 Bacteria 4376875
291 2852628406 2852627209 Bacteria 5896285
292 2884934887 2884933994 Bacteria 4535041
293 2914762074 2914759650 Bacteria 4701441
294 2919438485 2919437846 Bacteria 6199444
295 2928081954 2928078545 Bacteria 6534839
296 2928151970 2928147474 Bacteria 6512076
297 2929239688 2929239360 Bacteria 7745570
298 2932088156 2932082852 Bacteria 6563563
299 2977234379 2977232053 Bacteria 5485925
300 8003153545 8003151029 Bacteria 8187759
301 Ga0070680_100011630
302 SwRhRL2b_contig_1307791
303 JGI24740J21852_10004957
304 JGI24740J21852_10035309
305 JGI24737J22298_10000022
306 JGI24737J22298_10027154
307 JGI24735J21928_10000031
308 JGI24735J21928_10014660
309 JGI25162J39368_1000108
310 JGI25162J39368_1001282
311 JGI25154J39366_1000065
312 JGI25164J39214_1002209
313 JGI25165J46597_1000899
314 rootH1_10000675
315 rootH2_10007289
316 rootH2_10018543
317 rootH2_10024181
318 rootH2_10050245
319 rootH2_10056261
320 rootH2_10101933
321 rootH2_10151451
322 rootL2_10084514
323 rootH1_10006177
324 rootH1_10008697
325 rootH1_10023196
326 rootH1_10028571
327 JGI25160J50197_1002464
328 Ga0055531_10001134
329 Ga0065714_10002527
330 Ga0065714_10074170
331 Ga0065704_10000217
332 Ga0070670_100157517
333 Ga0068868_100007238
334 Ga0068868_100253109
335 Ga0070673_100057287
336 Ga0070673_100160119
337 Ga0070659_100002519
338 Ga0070659_100254373
339 Ga0070667_100016206
340 Ga0070667_100054709
341 Ga0070681_10003297
342 Ga0070681_10065327
343 Ga0070679_100009590
344 Ga0068853_100001291
345 Ga0068853_100063504
346 Ga0070672_100214087
347 Ga0070665_100002043
348 Ga0068855_100000033
349 Ga0068855_100000071
350 Ga0068855_100112970
351 Ga0068855_100118342
352 Ga0068855_100321180
353 Ga0068857_100009507
354 Ga0068854_100024000
355 Ga0068854_100030031
356 Ga0068856_100000005
357 Ga0068856_100051008
358 Ga0068856_100257253
359 Ga0068852_100002761
360 Ga0068859_100000029
361 Ga0068859_100122730
362 Ga0068864_100007510
363 Ga0068851_10026392
364 Ga0068863_100001061
365 Ga0068863_100003266
366 Ga0068860_100000059
367 Ga0068860_100003333
368 Ga0068860_100011028
369 Ga0075366_10000091
370 Ga0097621_100026014
371 Ga0097621_100129396
372 Ga0068871_100007108
373 Ga0068871_100125826
374 Ga0097620_100000029
375 Ga0097620_100122724
376 Ga0105240_10002354
377 Ga0105240_10009313
378 Ga0105240_10011579
379 Ga0105240_10019879
380 Ga0105240_10039479
381 Ga0105240_10082072
382 Ga0105245_10058766
383 Ga0105247_10018440
384 Ga0105241_10000432
385 Ga0105241_10048913
386 Ga0105241_10056753
387 Ga0105241_10104338
388 Ga0105241_10107144
389 Ga0105237_10000128
390 Ga0105237_10000143
391 Ga0105237_10001131
392 Ga0105237_10001817
393 Ga0105237_10002076
394 Ga0105237_10004189
395 Ga0105237_10006146
396 Ga0105237_10015751
397 Ga0105237_10028541
398 Ga0105237_10030737
399 Ga0105238_10011726
400 Ga0105238_10023664
401 Ga0105249_10001545
402 Ga0105239_10000008
403 Ga0105239_10000059
404 Ga0105239_10000071
405 Ga0105239_10003259
406 Ga0105239_10005273
407 Ga0105239_10022361
408 Ga0105239_10025766
409 Ga0105239_10028391
410 Ga0105239_10090011
411 Ga0105246_10015143
412 Ga0157373_10000041
413 Ga0157373_10001855
414 Ga0157373_10005651
415 Ga0157371_10000836
416 Ga0157371_10000942
417 Ga0157371_10001078
418 Ga0157371_10001357
419 Ga0157371_10134345
420 Ga0157370_10012666
421 Ga0157370_10026527
422 Ga0157370_10042280
423 Ga0157370_10085708
424 Ga0157369_10000551
425 Ga0157369_10109540
426 Ga0157369_10165862
427 Ga0157374_10000009
428 Ga0157374_10079927
429 Ga0157378_10016455
430 Ga0157378_10019542
431 Ga0157378_10046434
432 Ga0163162_10000245
433 Ga0163162_10000396
434 Ga0163162_10006902
435 Ga0157372_10000017
436 Ga0157372_10000158
437 Ga0157372_10000555
438 Ga0157372_10022151
439 Ga0157372_10175002
440 Ga0157372_10311878
441 Ga0157375_10012275
442 Ga0157375_10026804
443 Ga0157375_10052680
444 Ga0163163_10208098
445 Ga0182008_10001429
446 Ga0157379_10211168
447 Ga0157376_10000710
448 Ga0157376_10004371
449 Ga0157376_10153539
450 Ga0163161_10022698
451 Ga0207427_100110
452 Ga0209437_100093
453 Ga0209437_100237
454 Ga0209646_1000002
455 Ga0209026_1000216
456 Ga0209026_1000850
457 Ga0209026_1004211
458 Ga0209233_1000089
459 Ga0207426_1000002
460 Ga0207426_1000236
461 Ga0209257_1000025
462 Ga0207680_10000016
463 Ga0207647_10000135
464 Ga0207647_10024839
465 Ga0207705_10044553
466 Ga0207654_10004141
467 Ga0207707_10090201
468 Ga0207695_10000446
469 Ga0207695_10028571
470 Ga0207695_10058172
471 Ga0207695_10182060
472 Ga0207695_10257668
473 Ga0207671_10000778
474 Ga0207671_10000968
475 Ga0207671_10001329
476 Ga0207671_10001567
477 Ga0207671_10002966
478 Ga0207671_10003356
479 Ga0207671_10008382
480 Ga0207671_10013833
481 Ga0207671_10197616
482 Ga0207652_10013573
483 Ga0207694_10023892
484 Ga0207650_10019481
485 Ga0207687_10091444
486 Ga0207644_10067343
487 Ga0207704_10123261
488 Ga0207691_10180644
489 Ga0207689_10000339
490 Ga0207667_10000046
491 Ga0207667_10000635
492 Ga0207667_10011398
493 Ga0207667_10314708
494 Ga0207651_10247978
495 Ga0207712_10021130
496 Ga0207640_10078362
497 Ga0207640_10181482
498 Ga0207658_10016240
499 Ga0207658_10024228
500 Ga0207703_10077458
501 Ga0207703_10286472
502 Ga0207639_10009587
503 Ga0207639_10101380
504 Ga0207702_10000249
505 Ga0207702_10200453
506 Ga0207702_10224269
507 Ga0207641_10000244
508 Ga0207641_10018608
509 Ga0207676_10005312
510 Ga0207674_10040595
511 Ga0207698_10004150
512 Ga0207698_10009109
513 Ga0268266_10000016
514 Ga0268264_10000015
515 Ga0268264_10005467
516 Ga0307517_10005985
517 Ga0307515_10000493
518 Ga0307515_10000667
519 Ga0307515_10000790
520 Ga0265338_10046326
521 Ga0307511_10000418
522 Ga0316177_1064769
523 Ga0316176_1167703
524 Ga0316181_1051489
525 Ga0307509_10040850
526 Ga0307509_10221220
527 Ga0307516_10006387
528 Ga0307516_10099871
529 Ga0307412_10000033
530 Ga0307510_10000042
531 Ga0307510_10000774
532 Ga0395899_0000017
533 Ga0395899_0000267
534 Ga0466961_0118359
535 Ga0466959_0000501
536 Ga0466958_0014309
537 Ga0466958_0080664
538 Ga0495651_0058786
539 Ga0495650_0000098
540 Ga0495585_0000029
541 Ga0495606_0000021
542 Ga0495606_0000322
543 Ga0495606_0036661
544 Ga0495606_0079675
545 Ga0495610_0001345
546 Ga0495616_0000972
547 Ga0495631_0013068
548 Ga0495648_0002284
549 Ga0495652_0072668
550 Ga0495609_0008175
551 Ga0495609_0029496
552 Ga0495609_0068104
553 Ga0495622_0018464
554 Ga0495633_0000275
555 Ga0495633_0005737
556 Ga0495668_0000017
557 Ga0495625_0000435
558 Ga0495625_0001213
559 Ga0495625_0001390
560 Ga0495625_0018957
561 Ga0495661_0000702
562 Ga0495661_0022788
563 Ga0495649_0000226
564 Ga0495672_0018693
565 Ga0495687_000004
566 Ga0495687_001385
567 Ga0495687_035490
568 Ga0495673_0020610
569 Ga0495686_0000128
570 Ga0495686_0002904
571 Ga0495686_0029883
572 Ga0496122_0005356
573 Ga0496123_0009042
574 Ga0496126_0033313
575 Ga0495682_0032502
576 Ga0501241_001133
577 nmdc:mga0k408_36764_c1
578 nmdc:mga0k408_490_c1
579 Ga0500635_0001281
580 Ga0500646_0006539
581 Ga0500608_000428
582 Ga0500608_031700
583 Ga0500618_000539
584 Ga0500622_0002896
585 Ga0466962_0003268
586 2599481351
587 2738761196
588 2842906285
589 2852626461
590 2852628406
591 2884934887
592 2914762074
593 2919438485
594 2928081954
595 2928151970
596 2929239688
597 2932088156
598 2977234379
599 8003153545

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01103

Omp85

Omp85 superfamily domain

239

485

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4n74-assembly1.cif.gz_A crystal structure of outer membrane protein tama beta-barrel domain in e.coli 0.6816 52 406
4c00-assembly1.cif.gz_A crystal structure of tama from e. coli 0.6776 50 409
4n74-assembly1.cif.gz_A crystal structure of outer membrane protein tama beta-barrel domain in e.coli 0.6706 52 406
4qky-assembly1.cif.gz_A crystal structure analysis of the membrane transporter fhac 0.6232 55 409
6wim-assembly1.cif.gz_A cdib from escherichia coli 0.614 49 405
ID Description Score Start End Superfamily
4c00A04 Mainly Beta;Beta Barrel;Porin;membrane protein fhac: a member of the omp85/tpsb transporter family 0.6761 50 409 2.40.160.50
4c00A04 Mainly Beta;Beta Barrel;Porin;membrane protein fhac: a member of the omp85/tpsb transporter family 0.6743 50 409 2.40.160.50
af_Q9FHQ9_1_163_2.40.160.10 Mainly Beta;Beta Barrel;Porin;Porin 0.6467 52 296 2.40.160.10
af_P46576_102_433_2.40.160.50 Mainly Beta;Beta Barrel;Porin;membrane protein fhac: a member of the omp85/tpsb transporter family 0.6406 53 406 2.40.160.50
af_P46576_102_433_2.40.160.50 Mainly Beta;Beta Barrel;Porin;membrane protein fhac: a member of the omp85/tpsb transporter family 0.6373 53 406 2.40.160.50
ID Description Score Start End GO Terms
AF-A0A4Q3C412-F1-model_v4 Bacterial surface antigen (D15) domain-containing protein 0.9432 109 409 GO:0019867
AF-A0A1H0TV27-F1-model_v4 Surface antigen 0.9419 23 409
AF-A0A5M9H3Q7-F1-model_v4 BamA/TamA family outer membrane protein 0.9402 30 409 GO:0019867
AF-A0A4Q3C412-F1-model_v4 Bacterial surface antigen (D15) domain-containing protein 0.9401 109 409 GO:0019867
AF-A0A5M9H3Q7-F1-model_v4 BamA/TamA family outer membrane protein 0.9354 30 409 GO:0019867

Map