F394902

General Info

Members Datasets Scaffolds Average Seq Length
299 208 598 382

Family's Representative Sequence

Representative Sequence 3300031731|Ga0307405_10000046|Ga0307405_1000004635
Length 419
Sequence MILKIFSLCTIAIAQRSSWAFGKGFYALSFFFPIFAYKMLNIQSKLPGVSTTIFSVMSKLAAEHNAINLSQGFPDYACDPKLVELVNKAMQDGFNQYAPMPGSTFLKETIAEKVEKLYNIKYNPETEITVTAGGTQAIFTALAAIINAGDEVIIFEPAYDSYAPTIKLLGGLVKTYELAPPNYAIDWDMVKKLFTAKTRMIILNTPQNPTGSILSSDDMKSLIKLITGTDILILSDEVYEHLIYDEQKHQSVMLYPELKQRSFIVASFGKLLHATGWKLGYCLAPEKLTKEFRKVHQFNVFSVNSPMQQAIADYIKEPKNYTEIGTFFQQKRDYFRGLLAESRFKLLPCNGSYFQCASYSSISDEKDTDFSMRLIREFGVATIPVSAFYQKATDHKIIRFCFAKENATLALAAEKLKNV

Samples

Sample ID Description Type Environment
1 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
5 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
10 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
11 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
12 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
13 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
14 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
15 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
28 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
29 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
36 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
37 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
38 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
57 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
58 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
59 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
60 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
61 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
62 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
63 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
64 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
65 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
66 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
68 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
69 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
95 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
98 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
99 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
100 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
101 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
102 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
103 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
104 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
105 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
106 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
107 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
114 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
115 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
116 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
117 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
118 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
119 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
120 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
123 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
124 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
125 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
126 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
127 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
128 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
129 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
130 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
131 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
132 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
133 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
134 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
135 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
138 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
139 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
140 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
141 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
142 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
143 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
144 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
145 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
146 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
147 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
149 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
150 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
151 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
152 2551306352 Acinetobacter sp. GG2 Isolate Rhizosphere
153 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
154 2639762793 Acinetobacter calcoaceticus GK1 Isolate Rhizosphere
155 2643221596 Acidovorax sp. Root70 Isolate Unclassified
156 2643221609 Acidovorax sp. Root217 Isolate Unclassified
157 2643221611 Acidovorax sp. Root219 Isolate Unclassified
158 2643221665 Acinetobacter sp. Root1280 Isolate Unclassified
159 2643221736 Bosea sp. Root483D1 Isolate Unclassified
160 2675903507 Acinetobacter calcoaceticus GK2 Isolate Unclassified
161 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
162 2721755523 Delftia sp. HK171 Isolate Unclassified
163 2738541283 Pedobacter sp. OK701 Isolate Unclassified
164 2738541284 Pedobacter sp. YR016 Isolate Unclassified
165 2738541302 Pedobacter sp. CF074 Isolate Unclassified
166 2738543012 Acidovorax sp. CF301 Isolate Unclassified
167 2738543023 Pedobacter sp. OK628 Isolate Unclassified
168 2739367651 Pedobacter sp. OK291 Isolate Unclassified
169 2739367656 Pedobacter sp. CF523 Isolate Unclassified
170 2739367663 Pedobacter sp. YR510 Isolate Unclassified
171 2744054655 Acinetobacter sp. BMW17 Isolate Unclassified
172 2773857761 Acinetobacter sp. 3664 Isolate Unclassified
173 2773857770 Acinetobacter sp. 3636 Isolate Unclassified
174 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
175 2816332133 Acidovorax radicis 2721A Isolate Unclassified
176 2818991437 Pedobacter terrae 518 Isolate Unclassified
177 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
178 2841760612 Bosea sp. Tri-49 Isolate Nodule
179 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
180 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
181 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
182 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
183 2844104063 Bosea sp. Tri-39 Isolate Nodule
184 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
185 2851182111 Bosea sp. Tri-44 Isolate Nodule
186 2851246043 Bosea sp. Tri-54 Isolate Nodule
187 2857553236 Duganella sp. R-74557 Isolate Unclassified
188 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
189 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
190 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
191 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
192 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
193 2916699645 Acinetobacter ursingii M3 Isolate Unclassified
194 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
195 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
196 2919182534 Acinetobacter calcoaceticus 2589 Isolate Rhizosphere
197 2919476304 Duganella sp. 3397 Isolate Unclassified
198 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
199 2928515477 Acinetobacter bereziniae 1375 Isolate Rhizosphere
200 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
201 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
202 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
203 2984568884 Acinetobacter baylyi SORGH_AS893 Isolate Aerial Root
204 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
205 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
206 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
207 8033232454 Acinetobacter radioresistens SA188 Isolate Unclassified
208 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 80.94
Metatranscriptomes 0
Isolates 19.06

Biome Distribution

Category Percentage (%)
Aerial Root 0.33
Bulb 0
Endosphere 7.69
Nodule 3.34
Rhizoplane 0.67
Rhizosphere 69.9
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307405_10000046 3300031731 Bacteria 71442
2 SwRhRL2b_contig_900558 2162886007 Bacteria 1400
3 JGI25152J39213_1000056 3300002773 Bacteria 75516
4 JGI25150J39212_1000009 3300002774 Bacteria 249509
5 JGI25151J46595_10000017 3300003187 Bacteria 249509
6 JGI25153J46596_10000023 3300003215 Bacteria 249509
7 rootH2_10004415 3300003320 Bacteria 27098
8 rootH2_10050637 3300003320 Bacteria 9642
9 rootH1_10165498 3300003323 Bacteria 4512
10 Ga0055536_1000030 3300003781 Bacteria 153926
11 Ga0055536_1000367 3300003781 Bacteria 33548
12 Ga0055536_1000709 3300003781 Bacteria 22354
13 Ga0055530_10000972 3300003791 Bacteria 23228
14 Ga0058692_1000007 3300003856 Bacteria 366313
15 Ga0065703_1000071 3300005272 Bacteria 20714
16 Ga0065714_10002192 3300005288 Bacteria 92967
17 Ga0065714_10003657 3300005288 Bacteria 30790
18 Ga0065714_10064897 3300005288 Bacteria 15960
19 Ga0065704_10072265 3300005289 Bacteria 8829
20 Ga0065704_10079189 3300005289 Bacteria 4233
21 Ga0065704_10088158 3300005289 Bacteria 2962
22 Ga0070676_10001701 3300005328 Bacteria 11187
23 Ga0070660_100102186 3300005339 Bacteria 2272
24 Ga0070669_100001380 3300005353 Bacteria 17523
25 Ga0070673_100006148 3300005364 Bacteria 7782
26 Ga0070673_100008297 3300005364 Bacteria 6902
27 Ga0070678_100028912 3300005456 Bacteria 3788
28 Ga0070662_100000729 3300005457 Bacteria 20118
29 Ga0068867_100000116 3300005459 Bacteria 50447
30 Ga0068853_100004019 3300005539 Bacteria 11312
31 Ga0070665_100049025 3300005548 Bacteria 4239
32 Ga0068855_100026005 3300005563 Bacteria 7002
33 Ga0068857_100073126 3300005577 Bacteria 3054
34 Ga0068852_100000326 3300005616 Bacteria 32458
35 Ga0068866_10004544 3300005718 Bacteria 5690
36 Ga0068870_10035865 3300005840 Bacteria 2548
37 Ga0075363_100001762 3300006048 Bacteria 8451
38 Ga0075364_10011529 3300006051 Bacteria 5373
39 Ga0075369_10008065 3300006186 Bacteria 4038
40 Ga0097621_100000054 3300006237 Bacteria 59756
41 Ga0068871_100000145 3300006358 Bacteria 46320
42 Ga0068865_100000051 3300006881 Bacteria 65346
43 Ga0079104_1000011 3300006946 Bacteria 359962
44 Ga0079104_1007353 3300006946 Bacteria 4009
45 Ga0105251_10001974 3300009011 Bacteria 16741
46 Ga0105251_10103075 3300009011 Bacteria 1303
47 Ga0105251_10106574 3300009011 Bacteria 1279
48 Ga0105251_10111863 3300009011 Bacteria 1243
49 Ga0105244_10009136 3300009036 Bacteria 6118
50 Ga0105244_10010055 3300009036 Bacteria 5762
51 Ga0105250_10011819 3300009092 Bacteria 3619
52 Ga0105250_10083609 3300009092 Bacteria 1295
53 Ga0105240_10003138 3300009093 Bacteria 26003
54 Ga0105240_10006704 3300009093 Bacteria 16871
55 Ga0105240_10292654 3300009093 Bacteria 1866
56 Ga0105240_10332324 3300009093 Bacteria 1729
57 Ga0105247_10010594 3300009101 Bacteria 5569
58 Ga0105247_10075157 3300009101 Bacteria 2120
59 Ga0105243_10000016 3300009148 Bacteria 235629
60 Ga0105243_10000781 3300009148 Bacteria 30536
61 Ga0105243_10001394 3300009148 Bacteria 21367
62 Ga0105241_10001103 3300009174 Bacteria 20558
63 Ga0105241_10021328 3300009174 Bacteria 4788
64 Ga0105242_10013193 3300009176 Bacteria 6379
65 Ga0105237_10001447 3300009545 Bacteria 31365
66 Ga0105237_10006679 3300009545 Bacteria 12752
67 Ga0105237_10034815 3300009545 Bacteria 5096
68 Ga0105237_10280317 3300009545 Bacteria 1669
69 Ga0105238_10004886 3300009551 Bacteria 13258
70 Ga0105249_10000706 3300009553 Bacteria 30271
71 Ga0105239_10000228 3300010375 Bacteria 82820
72 Ga0105239_10005819 3300010375 Bacteria 14375
73 Ga0105239_10105533 3300010375 Bacteria 3120
74 Ga0105239_10151979 3300010375 Bacteria 2584
75 Ga0157373_10001209 3300013100 Bacteria 19722
76 Ga0157371_10000034 3300013102 Bacteria 223947
77 Ga0157371_10001510 3300013102 Bacteria 24040
78 Ga0157371_10003233 3300013102 Bacteria 14952
79 Ga0157371_10008786 3300013102 Bacteria 8010
80 Ga0157371_10049074 3300013102 Bacteria 2999
81 Ga0157371_10150208 3300013102 Bacteria 1661
82 Ga0157370_10003221 3300013104 Bacteria 19273
83 Ga0157370_10005022 3300013104 Bacteria 14947
84 Ga0157370_10032580 3300013104 Bacteria 5088
85 Ga0157370_10042600 3300013104 Bacteria 4373
86 Ga0157370_10053620 3300013104 Bacteria 3845
87 Ga0157370_10080579 3300013104 Bacteria 3065
88 Ga0157369_10000002 3300013105 Bacteria 524510
89 Ga0157369_10004567 3300013105 Bacteria 16273
90 Ga0157369_10030662 3300013105 Bacteria 5929
91 Ga0157369_10109089 3300013105 Bacteria 2943
92 Ga0157374_10001372 3300013296 Bacteria 20693
93 Ga0157374_10001374 3300013296 Bacteria 20684
94 Ga0163162_10032886 3300013306 Bacteria 5151
95 Ga0157372_10000883 3300013307 Bacteria 32570
96 Ga0157372_10007548 3300013307 Bacteria 11565
97 Ga0157375_10095830 3300013308 Bacteria 3039
98 Ga0182008_10000018 3300014497 Bacteria 230609
99 Ga0182008_10000524 3300014497 Bacteria 28770
100 Ga0182008_10001182 3300014497 Bacteria 17998
101 Ga0182008_10017905 3300014497 Bacteria 3670
102 Ga0182008_10018995 3300014497 Bacteria 3553
103 Ga0182006_1000042 3300015261 Bacteria 202969
104 Ga0182006_1000382 3300015261 Bacteria 36661
105 Ga0182006_1006345 3300015261 Bacteria 5505
106 Ga0182006_1016754 3300015261 Bacteria 3123
107 Ga0182007_10000001 3300015262 Bacteria 1127301
108 Ga0182007_10000508 3300015262 Bacteria 22990
109 Ga0182007_10015715 3300015262 Bacteria 2813
110 Ga0182005_1000008 3300015265 Bacteria 471394
111 Ga0183373_1010 3300015682 Bacteria 196982
112 Ga0163161_10000211 3300017792 Bacteria 53320
113 Ga0163161_10000218 3300017792 Bacteria 52323
114 Ga0163161_10001606 3300017792 Bacteria 16680
115 Ga0163161_10012130 3300017792 Bacteria 5978
116 Ga0163161_10079996 3300017792 Bacteria 2404
117 Ga0207425_1000007 3300025245 Bacteria 777411
118 Ga0209129_1000006 3300025258 Bacteria 777761
119 Ga0209233_1005281 3300025261 Bacteria 4305
120 Ga0209130_1000045 3300025284 Bacteria 240278
121 Ga0209676_1000001 3300025292 Bacteria 1852142
122 Ga0209025_1000025 3300025294 Bacteria 524454
123 Ga0209025_1000932 3300025294 Bacteria 44615
124 Ga0209758_1000016 3300025297 Bacteria 778557
125 Ga0209050_1000018 3300025298 Bacteria 723263
126 Ga0207696_1040676 3300025711 Bacteria 1361
127 Ga0207655_1001873 3300025728 Bacteria 18107
128 Ga0207655_1002409 3300025728 Bacteria 15224
129 Ga0207655_1003432 3300025728 Bacteria 11799
130 Ga0207655_1007170 3300025728 Bacteria 7269
131 Ga0207655_1007639 3300025728 Bacteria 6982
132 Ga0207713_1003189 3300025735 Bacteria 11339
133 Ga0207713_1021246 3300025735 Bacteria 3117
134 Ga0207710_10000018 3300025900 Bacteria 346727
135 Ga0207710_10057260 3300025900 Bacteria 1760
136 Ga0207647_10000030 3300025904 Bacteria 106974
137 Ga0207647_10006358 3300025904 Bacteria 8590
138 Ga0207645_10000652 3300025907 Bacteria 28838
139 Ga0207654_10002197 3300025911 Bacteria 9992
140 Ga0207695_10000013 3300025913 Bacteria 821265
141 Ga0207695_10004410 3300025913 Bacteria 19232
142 Ga0207695_10005523 3300025913 Bacteria 16736
143 Ga0207671_10005850 3300025914 Bacteria 11172
144 Ga0207671_10020108 3300025914 Bacteria 5090
145 Ga0207671_10041965 3300025914 Bacteria 3386
146 Ga0207657_10109434 3300025919 Bacteria 2284
147 Ga0207694_10159579 3300025924 Bacteria 1821
148 Ga0207690_10128043 3300025932 Bacteria 1854
149 Ga0207690_10135581 3300025932 Bacteria 1807
150 Ga0207706_10001974 3300025933 Bacteria 20125
151 Ga0207686_10178214 3300025934 Bacteria 1505
152 Ga0207709_10000016 3300025935 Bacteria 478406
153 Ga0207709_10000020 3300025935 Bacteria 392366
154 Ga0207709_10000245 3300025935 Bacteria 66704
155 Ga0207704_10000046 3300025938 Bacteria 86187
156 Ga0207667_10201786 3300025949 Bacteria 2040
157 Ga0207651_10008948 3300025960 Bacteria 5439
158 Ga0207651_10044962 3300025960 Bacteria 2959
159 Ga0207712_10035817 3300025961 Bacteria 3375
160 Ga0207639_10065875 3300026041 Bacteria 2813
161 Ga0207648_10000257 3300026089 Bacteria 57438
162 Ga0207674_10038716 3300026116 Bacteria 4945
163 Ga0207683_10006037 3300026121 Bacteria 10370
164 Ga0207698_10001065 3300026142 Bacteria 15961
165 Ga0209281_1000005 3300027111 Bacteria 1242284
166 Ga0209281_1005216 3300027111 Bacteria 3659
167 Ga0209371_1000024 3300027312 Bacteria 477286
168 Ga0268266_10002277 3300028379 Bacteria 20864
169 Ga0307517_10001926 3300028786 Bacteria 33977
170 Ga0307515_10051252 3300028794 Bacteria 6161
171 Ga0268256_1000026 3300030500 Bacteria 477260
172 Ga0316183_1061190 3300030742 Bacteria 19974
173 Ga0316181_1135230 3300030744 Bacteria 6751
174 Ga0316575_10000039 3300031665 Bacteria 32234
175 Ga0307407_10000090 3300031903 Bacteria 32483
176 Ga0307416_100000195 3300032002 Bacteria 32400
177 Ga0307414_10000722 3300032004 Bacteria 16914
178 Ga0307414_10006868 3300032004 Bacteria 6368
179 Ga0307414_10119547 3300032004 Bacteria 2023
180 Ga0307414_10159926 3300032004 Bacteria 1788
181 Ga0316583_10001918 3300032133 Bacteria 7106
182 Ga0316574_0000679 3300035398 Bacteria 14420
183 Ga0395899_0001077 3300037312 Bacteria 24592
184 Ga0395900_0001393 3300037418 Bacteria 28920
185 Ga0395900_0003225 3300037418 Bacteria 17664
186 Ga0395898_0010162 3300037466 Bacteria 9850
187 Ga0395898_0087268 3300037466 Bacteria 3006
188 Ga0395905_0006361 3300037471 Bacteria 11905
189 Ga0395901_0004032 3300038443 Bacteria 14793
190 Ga0395901_0082314 3300038443 Bacteria 3363
191 Ga0451577_0003464 3300042876 Bacteria 17556
192 Ga0495627_000001 3300046453 Bacteria 1104709
193 Ga0495603_0055106 3300046455 Bacteria 2356
194 Ga0495650_0000185 3300046471 Bacteria 136913
195 Ga0495650_0052683 3300046471 Bacteria 1669
196 Ga0495584_0022006 3300046491 Bacteria 3236
197 Ga0495585_0021416 3300046492 Bacteria 3711
198 Ga0495606_0000087 3300046507 Bacteria 156407
199 Ga0495610_0000126 3300046512 Bacteria 85368
200 Ga0495610_0000469 3300046512 Bacteria 41650
201 Ga0495643_0061681 3300046522 Bacteria 1987
202 Ga0495644_0016854 3300046523 Bacteria 2796
203 Ga0495663_0002136 3300046525 Bacteria 6036
204 Ga0495586_0089349 3300046535 Bacteria 1700
205 Ga0495609_0000176 3300046538 Bacteria 64707
206 Ga0495633_0002529 3300046558 Bacteria 12851
207 Ga0495633_0019940 3300046558 Bacteria 3383
208 Ga0495633_0106263 3300046558 Bacteria 1302
209 Ga0495588_0039605 3300046674 Bacteria 2401
210 Ga0495670_0011629 3300046691 Bacteria 4331
211 Ga0495660_0000086 3300046810 Bacteria 100316
212 Ga0495660_0004027 3300046810 Bacteria 8971
213 Ga0495581_0158406 3300047315 Bacteria 1323
214 Ga0495636_0009245 3300047318 Bacteria 3880
215 Ga0495683_0016992 3300047323 Bacteria 3774
216 Ga0495675_0023999 3300047444 Bacteria 3886
217 Ga0495681_0014690 3300047470 Bacteria 4474
218 Ga0495593_0017529 3300047673 Bacteria 4030
219 Ga0496112_0055759 3300048915 Bacteria 3887
220 Ga0496113_0331388 3300048916 Bacteria 1220
221 Ga0496116_0001296 3300048919 Bacteria 28588
222 Ga0496116_0014421 3300048919 Bacteria 6313
223 Ga0496117_0002610 3300048920 Bacteria 22398
224 Ga0496119_0007511 3300048922 Bacteria 9799
225 Ga0496122_0000746 3300048925 Bacteria 63466
226 Ga0496122_0000965 3300048925 Bacteria 51557
227 Ga0496122_0059453 3300048925 Bacteria 2821
228 Ga0496122_0090198 3300048925 Bacteria 2092
229 Ga0496123_0000456 3300048926 Bacteria 71960
230 Ga0496123_0027595 3300048926 Bacteria 4225
231 Ga0496123_0035122 3300048926 Bacteria 3578
232 Ga0496124_0000813 3300048927 Bacteria 50733
233 Ga0496124_0016682 3300048927 Bacteria 6969
234 Ga0496125_0000710 3300048928 Bacteria 55020
235 Ga0496125_0022164 3300048928 Bacteria 5903
236 Ga0496126_0018678 3300048929 Bacteria 6861
237 Ga0495678_000002 3300049459 Bacteria 999613
238 Ga0501034_0060717 3300049571 Bacteria 3797
239 Ga0501280_003797 3300049776 Bacteria 2278
240 Ga0500635_0004988 3300053080 Bacteria 3455
241 Ga0500556_0000956 3300053104 Bacteria 15501
242 Ga0500608_000329 3300053122 Bacteria 18275
243 2552748569 2551306352 Bacteria 3873115
244 2586209966 2585427687 Bacteria 5544917
245 2640736165 2639762793 Bacteria 3943681
246 2643993290 2643221596 Bacteria 5006805
247 2644060663 2643221609 Bacteria 6756331
248 2644073984 2643221611 Bacteria 6820941
249 2644364588 2643221665 Bacteria 4699229
250 2644743754 2643221736 Bacteria 6608466
251 2678229398 2675903507 Bacteria 3737791
252 2722725702 2721755487 Bacteria 6357185
253 2722883928 2721755523 Bacteria 6430384
254 2738755040 2738541283 Bacteria 7222293
255 2738760993 2738541284 Bacteria 5199923
256 2738853208 2738541302 Bacteria 5944758
257 2739242685 2738543012 Bacteria 7115078
258 2739301196 2738543023 Bacteria 6767879
259 2739588778 2739367651 Bacteria 6359826
260 2739616029 2739367656 Bacteria 5152243
261 2739645195 2739367663 Bacteria 5040914
262 2745159580 2744054655 Bacteria 3552603
263 2774390076 2773857761 Bacteria 3837365
264 2774438079 2773857770 Bacteria 3911866
265 2776613179 2775506987 Bacteria 5373360
266 2816472996 2816332133 Bacteria 7249298
267 2819548766 2818991437 Bacteria 5805520
268 2839141620 2839138175 Bacteria 6549354
269 2841764929 2841760612 Bacteria 6454112
270 2842391989 2842391507 Bacteria 4486072
271 2842722095 2842718218 Bacteria 4560148
272 2842726203 2842722452 Bacteria 6263924
273 2842910447 2842909656 Bacteria 6185908
274 2844107623 2844104063 Bacteria 6440972
275 2849282259 2849281842 Bacteria 6065644
276 2851183628 2851182111 Bacteria 6047226
277 2851249729 2851246043 Bacteria 6439203
278 2857557383 2857553236 Bacteria 6166726
279 2857629175 2857627736 Bacteria 5625397
280 2895498913 2895498888 Bacteria 5283788
281 2902051782 2902048731 Bacteria 4976191
282 2904445594 2904445276 Bacteria 5310396
283 2904782442 2904780799 Bacteria 5840761
284 2916700639 2916699645 Bacteria 3568996
285 2919138490 2919134579 Bacteria 4480386
286 2919178361 2919177583 Bacteria 5641607
287 2919184407 2919182534 Bacteria 3907101
288 2919478027 2919476304 Bacteria 5888696
289 2919705530 2919704043 Bacteria 5560311
290 2928517289 2928515477 Bacteria 4448421
291 2946000802 2945997725 Bacteria 6404843
292 2954017672 2954016120 Bacteria 6446024
293 2961066116 2961064222 Bacteria 4749990
294 2984571571 2984568884 Bacteria 3884413
295 2987606257 2987605356 Bacteria 4187822
296 2990712276 2990710928 Bacteria 5002431
297 3003233944 3003233435 Bacteria 4458031
298 8033234354 8033232454 Bacteria 3202805
299 8057533044 8057529695 Bacteria 6306553
300 Ga0307405_10000046
301 SwRhRL2b_contig_900558
302 JGI25152J39213_1000056
303 JGI25150J39212_1000009
304 JGI25151J46595_10000017
305 JGI25153J46596_10000023
306 rootH2_10004415
307 rootH2_10050637
308 rootH1_10165498
309 Ga0055536_1000030
310 Ga0055536_1000367
311 Ga0055536_1000709
312 Ga0055530_10000972
313 Ga0058692_1000007
314 Ga0065703_1000071
315 Ga0065714_10002192
316 Ga0065714_10003657
317 Ga0065714_10064897
318 Ga0065704_10072265
319 Ga0065704_10079189
320 Ga0065704_10088158
321 Ga0070676_10001701
322 Ga0070660_100102186
323 Ga0070669_100001380
324 Ga0070673_100006148
325 Ga0070673_100008297
326 Ga0070678_100028912
327 Ga0070662_100000729
328 Ga0068867_100000116
329 Ga0068853_100004019
330 Ga0070665_100049025
331 Ga0068855_100026005
332 Ga0068857_100073126
333 Ga0068852_100000326
334 Ga0068866_10004544
335 Ga0068870_10035865
336 Ga0075363_100001762
337 Ga0075364_10011529
338 Ga0075369_10008065
339 Ga0097621_100000054
340 Ga0068871_100000145
341 Ga0068865_100000051
342 Ga0079104_1000011
343 Ga0079104_1007353
344 Ga0105251_10001974
345 Ga0105251_10103075
346 Ga0105251_10106574
347 Ga0105251_10111863
348 Ga0105244_10009136
349 Ga0105244_10010055
350 Ga0105250_10011819
351 Ga0105250_10083609
352 Ga0105240_10003138
353 Ga0105240_10006704
354 Ga0105240_10292654
355 Ga0105240_10332324
356 Ga0105247_10010594
357 Ga0105247_10075157
358 Ga0105243_10000016
359 Ga0105243_10000781
360 Ga0105243_10001394
361 Ga0105241_10001103
362 Ga0105241_10021328
363 Ga0105242_10013193
364 Ga0105237_10001447
365 Ga0105237_10006679
366 Ga0105237_10034815
367 Ga0105237_10280317
368 Ga0105238_10004886
369 Ga0105249_10000706
370 Ga0105239_10000228
371 Ga0105239_10005819
372 Ga0105239_10105533
373 Ga0105239_10151979
374 Ga0157373_10001209
375 Ga0157371_10000034
376 Ga0157371_10001510
377 Ga0157371_10003233
378 Ga0157371_10008786
379 Ga0157371_10049074
380 Ga0157371_10150208
381 Ga0157370_10003221
382 Ga0157370_10005022
383 Ga0157370_10032580
384 Ga0157370_10042600
385 Ga0157370_10053620
386 Ga0157370_10080579
387 Ga0157369_10000002
388 Ga0157369_10004567
389 Ga0157369_10030662
390 Ga0157369_10109089
391 Ga0157374_10001372
392 Ga0157374_10001374
393 Ga0163162_10032886
394 Ga0157372_10000883
395 Ga0157372_10007548
396 Ga0157375_10095830
397 Ga0182008_10000018
398 Ga0182008_10000524
399 Ga0182008_10001182
400 Ga0182008_10017905
401 Ga0182008_10018995
402 Ga0182006_1000042
403 Ga0182006_1000382
404 Ga0182006_1006345
405 Ga0182006_1016754
406 Ga0182007_10000001
407 Ga0182007_10000508
408 Ga0182007_10015715
409 Ga0182005_1000008
410 Ga0183373_1010
411 Ga0163161_10000211
412 Ga0163161_10000218
413 Ga0163161_10001606
414 Ga0163161_10012130
415 Ga0163161_10079996
416 Ga0207425_1000007
417 Ga0209129_1000006
418 Ga0209233_1005281
419 Ga0209130_1000045
420 Ga0209676_1000001
421 Ga0209025_1000025
422 Ga0209025_1000932
423 Ga0209758_1000016
424 Ga0209050_1000018
425 Ga0207696_1040676
426 Ga0207655_1001873
427 Ga0207655_1002409
428 Ga0207655_1003432
429 Ga0207655_1007170
430 Ga0207655_1007639
431 Ga0207713_1003189
432 Ga0207713_1021246
433 Ga0207710_10000018
434 Ga0207710_10057260
435 Ga0207647_10000030
436 Ga0207647_10006358
437 Ga0207645_10000652
438 Ga0207654_10002197
439 Ga0207695_10000013
440 Ga0207695_10004410
441 Ga0207695_10005523
442 Ga0207671_10005850
443 Ga0207671_10020108
444 Ga0207671_10041965
445 Ga0207657_10109434
446 Ga0207694_10159579
447 Ga0207690_10128043
448 Ga0207690_10135581
449 Ga0207706_10001974
450 Ga0207686_10178214
451 Ga0207709_10000016
452 Ga0207709_10000020
453 Ga0207709_10000245
454 Ga0207704_10000046
455 Ga0207667_10201786
456 Ga0207651_10008948
457 Ga0207651_10044962
458 Ga0207712_10035817
459 Ga0207639_10065875
460 Ga0207648_10000257
461 Ga0207674_10038716
462 Ga0207683_10006037
463 Ga0207698_10001065
464 Ga0209281_1000005
465 Ga0209281_1005216
466 Ga0209371_1000024
467 Ga0268266_10002277
468 Ga0307517_10001926
469 Ga0307515_10051252
470 Ga0268256_1000026
471 Ga0316183_1061190
472 Ga0316181_1135230
473 Ga0316575_10000039
474 Ga0307407_10000090
475 Ga0307416_100000195
476 Ga0307414_10000722
477 Ga0307414_10006868
478 Ga0307414_10119547
479 Ga0307414_10159926
480 Ga0316583_10001918
481 Ga0316574_0000679
482 Ga0395899_0001077
483 Ga0395900_0001393
484 Ga0395900_0003225
485 Ga0395898_0010162
486 Ga0395898_0087268
487 Ga0395905_0006361
488 Ga0395901_0004032
489 Ga0395901_0082314
490 Ga0451577_0003464
491 Ga0495627_000001
492 Ga0495603_0055106
493 Ga0495650_0000185
494 Ga0495650_0052683
495 Ga0495584_0022006
496 Ga0495585_0021416
497 Ga0495606_0000087
498 Ga0495610_0000126
499 Ga0495610_0000469
500 Ga0495643_0061681
501 Ga0495644_0016854
502 Ga0495663_0002136
503 Ga0495586_0089349
504 Ga0495609_0000176
505 Ga0495633_0002529
506 Ga0495633_0019940
507 Ga0495633_0106263
508 Ga0495588_0039605
509 Ga0495670_0011629
510 Ga0495660_0000086
511 Ga0495660_0004027
512 Ga0495581_0158406
513 Ga0495636_0009245
514 Ga0495683_0016992
515 Ga0495675_0023999
516 Ga0495681_0014690
517 Ga0495593_0017529
518 Ga0496112_0055759
519 Ga0496113_0331388
520 Ga0496116_0001296
521 Ga0496116_0014421
522 Ga0496117_0002610
523 Ga0496119_0007511
524 Ga0496122_0000746
525 Ga0496122_0000965
526 Ga0496122_0059453
527 Ga0496122_0090198
528 Ga0496123_0000456
529 Ga0496123_0027595
530 Ga0496123_0035122
531 Ga0496124_0000813
532 Ga0496124_0016682
533 Ga0496125_0000710
534 Ga0496125_0022164
535 Ga0496126_0018678
536 Ga0495678_000002
537 Ga0501034_0060717
538 Ga0501280_003797
539 Ga0500635_0004988
540 Ga0500556_0000956
541 Ga0500608_000329
542 2552748569
543 2586209966
544 2640736165
545 2643993290
546 2644060663
547 2644073984
548 2644364588
549 2644743754
550 2678229398
551 2722725702
552 2722883928
553 2738755040
554 2738760993
555 2738853208
556 2739242685
557 2739301196
558 2739588778
559 2739616029
560 2739645195
561 2745159580
562 2774390076
563 2774438079
564 2776613179
565 2816472996
566 2819548766
567 2839141620
568 2841764929
569 2842391989
570 2842722095
571 2842726203
572 2842910447
573 2844107623
574 2849282259
575 2851183628
576 2851249729
577 2857557383
578 2857629175
579 2895498913
580 2902051782
581 2904445594
582 2904782442
583 2916700639
584 2919138490
585 2919178361
586 2919184407
587 2919478027
588 2919705530
589 2928517289
590 2946000802
591 2954017672
592 2961066116
593 2984571571
594 2987606257
595 2990712276
596 3003233944
597 8033234354
598 8057533044

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

64

416

0.94

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

111

241

0.85

PF00266

Aminotran_5

Aminotransferase class-V

95

248

0.82

PF01053

Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

81

241

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1u08-assembly1.cif.gz_A crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.9857 7 382
1u08-assembly1.cif.gz_B crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.9825 7 382
1u08-assembly1.cif.gz_B crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.9671 7 382
2o0r-assembly1.cif.gz_B the three-dimensional structure of n-succinyldiaminopimelate aminotransferase from mycobacterium tuberculosis 0.9574 5 381
1v2d-assembly1.cif.gz_A-2 crystal structure of t.th hb8 glutamine aminotransferase 0.9462 16 381
ID Description Score Start End Superfamily
af_P77806_286_386_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9911 283 382 3.90.1150.10
af_P77806_47_284_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9878 45 279 3.40.640.10
af_A0A1D6I5Q5_168_402_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9789 44 275 3.40.640.10
1u08B01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9775 283 382 3.90.1150.10
af_P77806_286_386_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9718 283 382 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A7H9F5E6-F1-model_v4 deleted 0.9901 5 382
AF-A0A1E5T4N5-F1-model_v4 Aminotransferase 0.9892 5 382 GO:0005737
GO:0009058
GO:0016212
GO:0030170
AF-N6XFG0-F1-model_v4 Methionine aminotransferase 0.989 1 382 GO:0005737
GO:0009058
GO:0016212
GO:0030170
AF-A0A5C6M309-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9886 5 382 GO:0005737
GO:0009058
GO:0016212
GO:0030170
AF-A0A7C6JI12-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9878 1 379 GO:0005737
GO:0009058
GO:0016212
GO:0030170

Map