F395035

General Info

Members Datasets Scaffolds Average Seq Length
299 246 598 275

Family's Representative Sequence

Representative Sequence 3300048924|Ga0496121_0144828|Ga0496121_0144828_227_1123
Length 298
Sequence LGSGSAGALFGFVDERARSVSMLIRYGYDITVTCPQPTPMFSMLTPRPERSADVRSPDVLATNPVIATTTYRDLFGNICRRFVAPAGDLQLWGDGTLQDSGVHDLAFPDAREIPVAELPDDCLVFLMGSRYCETDRLSQIAWDRFGNVAPGWGRVQAICDFVHRHITFGYQDARSTRTALDAYQEQIGVCRDFAHLAIALCRCMNIPARYVNGHLGDIGIPILDPMDFSAWIEVFLGGRWMTFDPRNNVPRIGRIVIARGRDAADVPLINSFGPHVLKAFRVWTYDVTNAEAPTAAPA

Samples

Sample ID Description Type Environment
1 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
2 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
3 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
8 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
9 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
10 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
11 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
12 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
13 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
32 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300019188 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZE2 metaT (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
42 3300019190 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZE3 metaT (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
43 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
44 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
45 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
46 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
47 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
48 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
49 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
51 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
52 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
54 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
57 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
71 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
72 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
73 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
74 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
75 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
76 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
77 3300032120 Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
78 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
81 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
82 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
83 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
84 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
85 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
86 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
87 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
88 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
89 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
90 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
91 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
92 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
93 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
94 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
95 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
96 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
97 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
98 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
99 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
100 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
101 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
102 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
103 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
104 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
105 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
106 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
107 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
108 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
109 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
110 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
111 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
112 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
113 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
114 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
117 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
118 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
119 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
120 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
121 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
122 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
123 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
124 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
125 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
126 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
143 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
144 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
145 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
146 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
147 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
148 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
149 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
150 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
151 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
152 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
153 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
154 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
155 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
156 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
157 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
158 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
159 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
160 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
161 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
162 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
163 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
164 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
165 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
166 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
167 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
168 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
169 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
170 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
171 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
172 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
173 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
174 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
175 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
176 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
177 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
178 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
179 2516653085 Rhizobium leguminosarum bv. phaseoli 4292 Isolate Nodule
180 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
181 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
182 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
183 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
184 2585427526 Rhizobium leguminosarum OV152 Isolate Rhizosphere
185 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
186 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
187 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
188 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
189 2599185301 Mesorhizobium sp. NFR06 Isolate Rhizoplane
190 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
191 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
192 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
193 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
194 2791355265 Rhizobium sp. H4 Isolate Nodule
195 2791355267 Rhizobium sp. L18 Isolate Nodule
196 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
197 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
198 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
199 2838686498 Rhizobium leguminosarum SEMIA 416 Isolate Nodule
200 2838729681 Rhizobium leguminosarum SEMIA 445 Isolate Nodule
201 2838742623 Rhizobium leguminosarum SEMIA 449 Isolate Nodule
202 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
203 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
204 2842156927 Rhizobium leguminosarum SEMIA 459 Isolate Nodule
205 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
206 2842180545 Rhizobium leguminosarum SEMIA 463 Isolate Nodule
207 2842192696 Rhizobium esperanzae SEMIA 468 Isolate Nodule
208 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
209 2842229732 Rhizobium leguminosarum SEMIA 481 Isolate Nodule
210 2842243621 Rhizobium leguminosarum SEMIA 483 Isolate Nodule
211 2842257432 Rhizobium leguminosarum SEMIA 485 Isolate Nodule
212 2842271015 Rhizobium leguminosarum SEMIA 488 Isolate Nodule
213 2842285085 Rhizobium lentis SEMIA 490 Isolate Nodule
214 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
215 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
216 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
217 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
218 2842694124 Methylopila sp. R-72369 Isolate Unclassified
219 2844454524 Rhizobium leguminosarum bv. viciae BIHB 1217 Isolate Nodule
220 2854911287 Brucella lupini LUP21 Isolate Unclassified
221 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
222 2876369609 Mesorhizobium sp. USDA-HM6 Isolate Unclassified
223 2899275550 Paracoccus hibiscisoli CCTCC AB2016182 Isolate Rhizosphere
224 2915650412 Ochrobactrum sp. CM-21-5 Isolate Rhizosphere
225 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
226 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
227 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
228 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
229 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
230 2936375103 Rhizobium changzhiense WYCCWR 11317 Isolate Nodule
231 2968128360 Mesorhizobium sp. WSM3873 Isolate Unclassified
232 2977864932 Mesorhizobium tamadayense DSM 28320 Isolate Nodule
233 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
234 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
235 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
236 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
237 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
238 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
239 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
240 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
241 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule
242 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
243 8055617313 Mesorhizobium onobrychidis OM4 Isolate Nodule
244 8056375014 Rhizobium redzepovicii 18T Isolate Nodule
245 8056382006 Rhizobium croatiense 13T Isolate Nodule
246 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 71.24
Metatranscriptomes 1
Isolates 27.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.74
Nodule 19.06
Rhizoplane 1.34
Rhizosphere 45.82
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496121_0144828 3300048924 Bacteria 1757
2 JGI25157J39369_1000886 3300002741 Bacteria 14411
3 JGI25159J45721_1000175 3300002987 Bacteria 29637
4 JGI25151J46595_10000373 3300003187 Bacteria 46885
5 JGI25165J46597_1000006 3300003214 Bacteria 529784
6 JGI25153J46596_10001316 3300003215 Bacteria 14876
7 JGI25160J50197_1000365 3300003354 Bacteria 29637
8 JGI25161J50226_1000280 3300003374 Bacteria 29331
9 Ga0055526_1001092 3300003771 Bacteria 19774
10 Ga0055524_1035553 3300003775 Bacteria 1357
11 Ga0055536_1002447 3300003781 Bacteria 10430
12 Ga0055540_1000380 3300003792 Bacteria 37153
13 Ga0055543_1000372 3300004625 Bacteria 29554
14 Ga0065165_1001221 3300005262 Bacteria 29554
15 Ga0070658_10235279 3300005327 Bacteria 1552
16 Ga0070670_100086004 3300005331 Bacteria 2702
17 Ga0070670_100094657 3300005331 Bacteria 2569
18 Ga0070668_100000833 3300005347 Bacteria 21319
19 Ga0070668_100082360 3300005347 Bacteria 2524
20 Ga0070667_100002819 3300005367 Bacteria 14999
21 Ga0070663_100022860 3300005455 Bacteria 4184
22 Ga0070696_100197191 3300005546 Bacteria 1501
23 Ga0070665_100052682 3300005548 Bacteria 4081
24 Ga0070665_100521427 3300005548 Bacteria 1200
25 Ga0068859_100041032 3300005617 Bacteria 4649
26 Ga0068864_100248376 3300005618 Bacteria 1651
27 Ga0068861_100035988 3300005719 Bacteria 3671
28 Ga0068863_100086522 3300005841 Bacteria 2970
29 Ga0068858_100091570 3300005842 Bacteria 2830
30 Ga0068860_100000515 3300005843 Bacteria 47393
31 Ga0068860_100007752 3300005843 Bacteria 10725
32 Ga0068862_100012610 3300005844 Bacteria 6997
33 Ga0068862_100047458 3300005844 Bacteria 3665
34 Ga0075365_10031896 3300006038 Bacteria 3383
35 Ga0075364_10115139 3300006051 Bacteria 1797
36 Ga0075369_10035082 3300006186 Bacteria 2131
37 Ga0075369_10139533 3300006186 Bacteria 1105
38 Ga0075370_10001533 3300006353 Bacteria 10104
39 Ga0075370_10110479 3300006353 Bacteria 1596
40 Ga0075370_10214926 3300006353 Bacteria 1136
41 Ga0097620_100041032 3300006931 Bacteria 4649
42 Ga0105240_10437129 3300009093 Bacteria 1467
43 Ga0105241_10208033 3300009174 Bacteria 1638
44 Ga0105237_10134630 3300009545 Bacteria 2465
45 Ga0105237_10468920 3300009545 Bacteria 1265
46 Ga0105249_10674268 3300009553 Bacteria 1093
47 Ga0105239_10730727 3300010375 Bacteria 1133
48 Ga0105246_10039254 3300011119 Bacteria 3188
49 Ga0163162_10290124 3300013306 Bacteria 1768
50 Ga0184599_109615 3300019188 Bacteria 2757
51 Ga0184600_142993 3300019190 Bacteria 2348
52 Ga0214543_1000071 3300021327 Bacteria 123940
53 Ga0213872_10008556 3300021361 Bacteria 4949
54 Ga0209436_100259 3300025208 Bacteria 24235
55 Ga0209026_1000083 3300025250 Bacteria 190199
56 Ga0209759_1000310 3300025256 Bacteria 65918
57 Ga0209233_1000010 3300025261 Bacteria 1194329
58 Ga0209673_1001072 3300025273 Bacteria 31048
59 Ga0209130_1000598 3300025284 Bacteria 34961
60 Ga0209025_1000969 3300025294 Bacteria 43045
61 Ga0209564_1000692 3300025295 Bacteria 49341
62 Ga0209758_1001417 3300025297 Bacteria 28365
63 Ga0209050_1007548 3300025298 Bacteria 6061
64 Ga0209050_1016619 3300025298 Bacteria 2995
65 Ga0209256_1001225 3300025299 Bacteria 28613
66 Ga0209256_1008013 3300025299 Bacteria 5017
67 Ga0207426_1000779 3300025302 Bacteria 34961
68 Ga0209051_1000127 3300025303 Bacteria 142254
69 Ga0209257_1003172 3300025304 Bacteria 14622
70 Ga0209257_1010901 3300025304 Bacteria 4493
71 Ga0207668_10012941 3300025972 Bacteria 5124
72 Ga0207668_10036651 3300025972 Bacteria 3275
73 Ga0207658_10156205 3300025986 Bacteria 1864
74 Ga0207658_10460108 3300025986 Bacteria 1128
75 Ga0207703_10231417 3300026035 Bacteria 1657
76 Ga0207678_10037842 3300026067 Bacteria 4195
77 Ga0207702_10179697 3300026078 Bacteria 1947
78 Ga0207641_10051502 3300026088 Bacteria 3487
79 Ga0207648_10088841 3300026089 Bacteria 2698
80 Ga0207683_10058979 3300026121 Bacteria 3370
81 Ga0268266_10073188 3300028379 Bacteria 2973
82 Ga0268265_10003394 3300028380 Bacteria 11459
83 Ga0268265_10097906 3300028380 Bacteria 2361
84 Ga0268264_10000021 3300028381 Bacteria 481580
85 Ga0307513_10008284 3300031456 Bacteria 13326
86 Ga0307513_10136218 3300031456 Bacteria 2391
87 Ga0307508_10122144 3300031616 Bacteria 2207
88 Ga0316575_10078214 3300031665 Bacteria 1332
89 Ga0316579_10124371 3300031691 Bacteria 1240
90 Ga0316576_10051813 3300031727 Bacteria 2987
91 Ga0316578_10178298 3300031728 Bacteria 1280
92 Ga0307516_10000042 3300031730 Bacteria 142687
93 Ga0307516_10154349 3300031730 Bacteria 2053
94 Ga0316053_100045 3300032120 Bacteria 3719
95 Ga0316582_0098530 3300036647 Bacteria 1933
96 Ga0395905_0003882 3300037471 Bacteria 15774
97 Ga0395905_0070806 3300037471 Bacteria 3268
98 Ga0395905_0174731 3300037471 Bacteria 2017
99 Ga0316581_0016314 3300037588 Bacteria 2131
100 Ga0395901_0256238 3300038443 Bacteria 1822
101 Ga0436360_0738219 3300039438 Bacteria 1973
102 Ga0436361_1165990 3300039447 Bacteria 9005
103 Ga0436362_0153082 3300039453 Bacteria 1499
104 Ga0436362_0441355 3300039453 Bacteria 1027
105 Ga0439436_0079242 3300041404 Bacteria 914
106 Ga0451797_0456196 3300041453 Bacteria 2141
107 Ga0451795_0744027 3300041456 Bacteria 1099
108 Ga0451835_0379521 3300041492 Bacteria 1056
109 Ga0451839_0715386 3300041496 Bacteria 2813
110 Ga0451841_0810595 3300041498 Bacteria 2758
111 Ga0451847_0025505 3300041503 Bacteria 3348
112 Ga0451849_0000772 3300041505 Bacteria 2054
113 Ga0451849_0135007 3300041505 Bacteria 4954
114 Ga0451851_0517959 3300041507 Bacteria 2008
115 Ga0451843_0929443 3300041509 Bacteria 2080
116 Ga0451855_1367761 3300041511 Bacteria 1682
117 Ga0451853_0466640 3300041512 Bacteria 2342
118 Ga0451853_1104786 3300041512 Bacteria 1047
119 Ga0495627_062881 3300046453 Bacteria 1095
120 Ga0495638_0000143 3300046460 Bacteria 113640
121 Ga0495638_0052851 3300046460 Bacteria 2529
122 Ga0495638_0120736 3300046460 Bacteria 1549
123 Ga0495605_0002933 3300046474 Bacteria 10329
124 Ga0495605_0047456 3300046474 Bacteria 2107
125 Ga0495596_0026030 3300046500 Bacteria 2360
126 Ga0495607_0034614 3300046501 Bacteria 3063
127 Ga0495583_0119559 3300046506 Bacteria 1110
128 Ga0495606_0052796 3300046507 Bacteria 2640
129 Ga0495610_0043380 3300046512 Bacteria 2241
130 Ga0495631_0005459 3300046518 Bacteria 6651
131 Ga0495631_0040704 3300046518 Bacteria 2058
132 Ga0495632_0007903 3300046519 Bacteria 6611
133 Ga0495632_0064478 3300046519 Bacteria 1771
134 Ga0495643_0138292 3300046522 Bacteria 1217
135 Ga0495648_0056401 3300046524 Bacteria 2364
136 Ga0495654_0028453 3300046530 Bacteria 2858
137 Ga0495654_0028716 3300046530 Bacteria 2842
138 Ga0495654_0133333 3300046530 Bacteria 1113
139 Ga0495609_0020409 3300046538 Bacteria 3062
140 Ga0495597_0015722 3300046542 Bacteria 3581
141 Ga0495633_0124261 3300046558 Bacteria 1194
142 Ga0495668_0012519 3300046616 Bacteria 5030
143 Ga0495611_0007075 3300046648 Bacteria 4765
144 Ga0495625_0011757 3300046660 Bacteria 7113
145 Ga0495625_0113059 3300046660 Bacteria 1854
146 Ga0495661_0031745 3300046665 Bacteria 3346
147 Ga0495670_0041695 3300046691 Bacteria 2290
148 Ga0495671_0132487 3300046692 Bacteria 1215
149 Ga0495660_0015336 3300046810 Bacteria 4427
150 Ga0495660_0154263 3300046810 Bacteria 1131
151 Ga0495636_0035243 3300047318 Bacteria 2061
152 Ga0495672_0010398 3300047320 Bacteria 6632
153 Ga0495687_013033 3300047443 Bacteria 4359
154 Ga0495686_0031744 3300047472 Bacteria 3421
155 Ga0495626_0092990 3300048091 Bacteria 1324
156 Ga0496104_0299272 3300048907 Bacteria 1521
157 Ga0501031_0000036 3300049568 Bacteria 73760
158 Ga0501031_0045586 3300049568 Bacteria 2861
159 Ga0501032_0000100 3300049569 Bacteria 73505
160 Ga0501032_0005058 3300049569 Bacteria 9854
161 Ga0501033_0000088 3300049570 Bacteria 87638
162 Ga0501033_0010074 3300049570 Bacteria 7252
163 Ga0501034_0000176 3300049571 Bacteria 119228
164 Ga0501034_0000397 3300049571 Bacteria 73511
165 Ga0501034_0010488 3300049571 Bacteria 9648
166 Ga0501034_0011787 3300049571 Bacteria 9047
167 Ga0501036_0000056 3300049572 Bacteria 73511
168 Ga0501036_0003352 3300049572 Bacteria 12791
169 Ga0501037_0000119 3300049573 Bacteria 73510
170 Ga0501037_0006030 3300049573 Bacteria 8845
171 Ga0501038_0000098 3300049574 Bacteria 73471
172 Ga0501038_0003272 3300049574 Bacteria 15107
173 Ga0501039_0000013 3300049575 Bacteria 234418
174 Ga0501040_0011254 3300049576 Bacteria 5856
175 Ga0501043_0001191 3300049579 Bacteria 22880
176 Ga0501043_0005467 3300049579 Bacteria 10273
177 Ga0501047_0002744 3300049581 Bacteria 16765
178 Ga0501070_0021987 3300049586 Bacteria 5344
179 Ga0501257_001849 3300049686 Bacteria 4407
180 Ga0501080_0300508 3300049742 Bacteria 1456
181 Ga0501035_0000053 3300049822 Bacteria 142860
182 Ga0501035_0028972 3300049822 Bacteria 5051
183 Ga0501044_0000214 3300049823 Bacteria 73483
184 Ga0501044_0002313 3300049823 Bacteria 21712
185 nmdc:mga03n38_21056_c1 3300050490 Bacteria 2618
186 nmdc:mga0yw44_1503_c1 3300050492 Bacteria 9308
187 nmdc:mga07m45_223072_c1 3300050496 Bacteria 1096
188 nmdc:mga09592_195414_c1 3300050508 Bacteria 1751
189 nmdc:mga0sz30_104697_c1 3300050516 Bacteria 1237
190 nmdc:mga0sz30_1898_c1 3300050516 Bacteria 7458
191 Ga0500578_0082561 3300053086 Bacteria 2042
192 Ga0500650_0048495 3300053098 Bacteria 1970
193 Ga0500556_0000042 3300053104 Bacteria 134261
194 Ga0500556_0000126 3300053104 Bacteria 65589
195 Ga0500557_001437 3300053105 Bacteria 3878
196 Ga0500562_006492 3300053108 Bacteria 2946
197 Ga0500569_001450 3300053109 Bacteria 4486
198 Ga0500569_003167 3300053109 Bacteria 3327
199 Ga0500594_0000317 3300053118 Bacteria 10791
200 Ga0500594_0011477 3300053118 Bacteria 2069
201 Ga0500608_003447 3300053122 Bacteria 5934
202 Ga0500652_113999 3300053131 Bacteria 1130
203 Ga0500658_0003284 3300053134 Bacteria 6135
204 Ga0500559_0001037 3300053136 Bacteria 16987
205 Ga0500559_0051903 3300053136 Bacteria 1812
206 Ga0500568_0000500 3300053139 Bacteria 28859
207 Ga0500568_0001004 3300053139 Bacteria 19319
208 Ga0500573_0000954 3300053140 Bacteria 13223
209 Ga0500577_0029056 3300053142 Bacteria 1911
210 Ga0500616_0000837 3300053153 Bacteria 34541
211 Ga0500616_0007643 3300053153 Bacteria 6828
212 Ga0500616_0111787 3300053153 Bacteria 1318
213 Ga0500616_0116268 3300053153 Bacteria 1284
214 Ga0500622_0000116 3300053156 Bacteria 82811
215 Ga0500636_0001292 3300053177 Bacteria 13611
216 Ga0500636_0094728 3300053177 Bacteria 1705
217 2510132145 2510065019 Bacteria 6903379
218 2510898477 2510461076 Bacteria 8618824
219 2511132706 2510917022 Bacteria 6504556
220 2513568977 2513237084 Bacteria 7231967
221 2513580005 2513237085 Bacteria 7695351
222 2513635727 2513237093 Bacteria 7545552
223 2513709363 2513237103 Bacteria 7647401
224 2514023060 2513237162 Bacteria 7468464
225 2514591167 2513237351 Bacteria 6968952
226 2515111122 2515075009 Bacteria 7288508
227 2515639283 2515154113 Bacteria 7807172
228 2515642742 2515154114 Bacteria 7848616
229 2515658743 2515154116 Bacteria 7552979
230 2515743945 2515154134 Bacteria 7220242
231 2517039772 2516653077 Bacteria 7555578
232 2517075290 2516653085 Bacteria 7346596
233 2517093895 2517093000 Bacteria 7412387
234 2517405710 2517287029 Bacteria 6905599
235 2523470171 2523231067 Bacteria 5230452
236 2585275481 2582581307 Bacteria 6597605
237 2585525482 2585427526 Bacteria 7258840
238 2585562663 2585427531 Bacteria 6992870
239 2585899307 2585427608 Bacteria 6544331
240 2585906169 2585427609 Bacteria 6667127
241 2587981591 2585428125 Bacteria 6662905
242 2599936903 2599185301 Bacteria 6161860
243 2657681938 2657244999 Bacteria 5946535
244 2725951130 2724679232 Bacteria 7646494
245 2739351459 2738543031 Bacteria 5769731
246 2766067761 2765235942 Bacteria 7445910
247 2793353424 2791355265 Bacteria 6539969
248 2793368304 2791355267 Bacteria 7222458
249 2804750957 2802429268 Bacteria 6094027
250 2819612428 2818991448 Bacteria 6772224
251 2837653491 2837651117 Bacteria 3772164
252 2838688793 2838686498 Bacteria 7807632
253 2838731088 2838729681 Bacteria 7400765
254 2838744018 2838742623 Bacteria 7396178
255 2841857016 2841851746 Bacteria 7532261
256 2842115956 2842110456 Bacteria 7656360
257 2842159869 2842156927 Bacteria 6894975
258 2842168112 2842163707 Bacteria 6916235
259 2842183514 2842180545 Bacteria 6888678
260 2842193507 2842192696 Bacteria 6147454
261 2842220744 2842217011 Bacteria 7497767
262 2842234006 2842229732 Bacteria 7475766
263 2842245482 2842243621 Bacteria 7421798
264 2842259868 2842257432 Bacteria 7401195
265 2842274707 2842271015 Bacteria 7807131
266 2842287268 2842285085 Bacteria 6011953
267 2842306953 2842304105 Bacteria 7023636
268 2842404536 2842402390 Bacteria 6681310
269 2842410779 2842409023 Bacteria 6687331
270 2842417765 2842415677 Bacteria 6596907
271 2842696093 2842694124 Bacteria 4063419
272 2844455318 2844454524 Bacteria 7952546
273 2854911362 2854911287 Bacteria 5582813
274 2857520451 2857516855 Bacteria 7787325
275 2876374319 2876369609 Bacteria 6807521
276 2899276446 2899275550 Bacteria 3958688
277 2915653996 2915650412 Bacteria 4288180
278 2919455000 2919450847 Bacteria 5631160
279 2933572932 2933570622 Bacteria 7023390
280 2933592085 2933586486 Bacteria 7667493
281 2935904315 2935901341 Bacteria 7341747
282 2936368287 2936367885 Bacteria 7324495
283 2936376120 2936375103 Bacteria 6652732
284 2968131671 2968128360 Bacteria 6270294
285 2977865919 2977864932 Bacteria 7534097
286 639647284 639633055 Bacteria 7751309
287 8001848026 8001845381 Bacteria 5804942
288 8005308989 8005307578 Bacteria 7395396
289 8005376776 8005376324 Bacteria 6590079
290 8005461763 8005460587 Bacteria 7157962
291 8005562979 8005556819 Bacteria 6908598
292 8005570276 8005563573 Bacteria 7153261
293 8018168336 8018163183 Bacteria 7277977
294 8023687160 8023680758 Bacteria 7729763
295 8055434083 8055431914 Bacteria 4551896
296 8055621090 8055617313 Bacteria 7548464
297 8056379412 8056375014 Bacteria 7006639
298 8056384903 8056382006 Bacteria 6408074
299 8057881821 8057874678 Bacteria 7494653
300 Ga0496121_0144828
301 JGI25157J39369_1000886
302 JGI25159J45721_1000175
303 JGI25151J46595_10000373
304 JGI25165J46597_1000006
305 JGI25153J46596_10001316
306 JGI25160J50197_1000365
307 JGI25161J50226_1000280
308 Ga0055526_1001092
309 Ga0055524_1035553
310 Ga0055536_1002447
311 Ga0055540_1000380
312 Ga0055543_1000372
313 Ga0065165_1001221
314 Ga0070658_10235279
315 Ga0070670_100086004
316 Ga0070670_100094657
317 Ga0070668_100000833
318 Ga0070668_100082360
319 Ga0070667_100002819
320 Ga0070663_100022860
321 Ga0070696_100197191
322 Ga0070665_100052682
323 Ga0070665_100521427
324 Ga0068859_100041032
325 Ga0068864_100248376
326 Ga0068861_100035988
327 Ga0068863_100086522
328 Ga0068858_100091570
329 Ga0068860_100000515
330 Ga0068860_100007752
331 Ga0068862_100012610
332 Ga0068862_100047458
333 Ga0075365_10031896
334 Ga0075364_10115139
335 Ga0075369_10035082
336 Ga0075369_10139533
337 Ga0075370_10001533
338 Ga0075370_10110479
339 Ga0075370_10214926
340 Ga0097620_100041032
341 Ga0105240_10437129
342 Ga0105241_10208033
343 Ga0105237_10134630
344 Ga0105237_10468920
345 Ga0105249_10674268
346 Ga0105239_10730727
347 Ga0105246_10039254
348 Ga0163162_10290124
349 Ga0184599_109615
350 Ga0184600_142993
351 Ga0214543_1000071
352 Ga0213872_10008556
353 Ga0209436_100259
354 Ga0209026_1000083
355 Ga0209759_1000310
356 Ga0209233_1000010
357 Ga0209673_1001072
358 Ga0209130_1000598
359 Ga0209025_1000969
360 Ga0209564_1000692
361 Ga0209758_1001417
362 Ga0209050_1007548
363 Ga0209050_1016619
364 Ga0209256_1001225
365 Ga0209256_1008013
366 Ga0207426_1000779
367 Ga0209051_1000127
368 Ga0209257_1003172
369 Ga0209257_1010901
370 Ga0207668_10012941
371 Ga0207668_10036651
372 Ga0207658_10156205
373 Ga0207658_10460108
374 Ga0207703_10231417
375 Ga0207678_10037842
376 Ga0207702_10179697
377 Ga0207641_10051502
378 Ga0207648_10088841
379 Ga0207683_10058979
380 Ga0268266_10073188
381 Ga0268265_10003394
382 Ga0268265_10097906
383 Ga0268264_10000021
384 Ga0307513_10008284
385 Ga0307513_10136218
386 Ga0307508_10122144
387 Ga0316575_10078214
388 Ga0316579_10124371
389 Ga0316576_10051813
390 Ga0316578_10178298
391 Ga0307516_10000042
392 Ga0307516_10154349
393 Ga0316053_100045
394 Ga0316582_0098530
395 Ga0395905_0003882
396 Ga0395905_0070806
397 Ga0395905_0174731
398 Ga0316581_0016314
399 Ga0395901_0256238
400 Ga0436360_0738219
401 Ga0436361_1165990
402 Ga0436362_0153082
403 Ga0436362_0441355
404 Ga0439436_0079242
405 Ga0451797_0456196
406 Ga0451795_0744027
407 Ga0451835_0379521
408 Ga0451839_0715386
409 Ga0451841_0810595
410 Ga0451847_0025505
411 Ga0451849_0000772
412 Ga0451849_0135007
413 Ga0451851_0517959
414 Ga0451843_0929443
415 Ga0451855_1367761
416 Ga0451853_0466640
417 Ga0451853_1104786
418 Ga0495627_062881
419 Ga0495638_0000143
420 Ga0495638_0052851
421 Ga0495638_0120736
422 Ga0495605_0002933
423 Ga0495605_0047456
424 Ga0495596_0026030
425 Ga0495607_0034614
426 Ga0495583_0119559
427 Ga0495606_0052796
428 Ga0495610_0043380
429 Ga0495631_0005459
430 Ga0495631_0040704
431 Ga0495632_0007903
432 Ga0495632_0064478
433 Ga0495643_0138292
434 Ga0495648_0056401
435 Ga0495654_0028453
436 Ga0495654_0028716
437 Ga0495654_0133333
438 Ga0495609_0020409
439 Ga0495597_0015722
440 Ga0495633_0124261
441 Ga0495668_0012519
442 Ga0495611_0007075
443 Ga0495625_0011757
444 Ga0495625_0113059
445 Ga0495661_0031745
446 Ga0495670_0041695
447 Ga0495671_0132487
448 Ga0495660_0015336
449 Ga0495660_0154263
450 Ga0495636_0035243
451 Ga0495672_0010398
452 Ga0495687_013033
453 Ga0495686_0031744
454 Ga0495626_0092990
455 Ga0496104_0299272
456 Ga0501031_0000036
457 Ga0501031_0045586
458 Ga0501032_0000100
459 Ga0501032_0005058
460 Ga0501033_0000088
461 Ga0501033_0010074
462 Ga0501034_0000176
463 Ga0501034_0000397
464 Ga0501034_0010488
465 Ga0501034_0011787
466 Ga0501036_0000056
467 Ga0501036_0003352
468 Ga0501037_0000119
469 Ga0501037_0006030
470 Ga0501038_0000098
471 Ga0501038_0003272
472 Ga0501039_0000013
473 Ga0501040_0011254
474 Ga0501043_0001191
475 Ga0501043_0005467
476 Ga0501047_0002744
477 Ga0501070_0021987
478 Ga0501257_001849
479 Ga0501080_0300508
480 Ga0501035_0000053
481 Ga0501035_0028972
482 Ga0501044_0000214
483 Ga0501044_0002313
484 nmdc:mga03n38_21056_c1
485 nmdc:mga0yw44_1503_c1
486 nmdc:mga07m45_223072_c1
487 nmdc:mga09592_195414_c1
488 nmdc:mga0sz30_104697_c1
489 nmdc:mga0sz30_1898_c1
490 Ga0500578_0082561
491 Ga0500650_0048495
492 Ga0500556_0000042
493 Ga0500556_0000126
494 Ga0500557_001437
495 Ga0500562_006492
496 Ga0500569_001450
497 Ga0500569_003167
498 Ga0500594_0000317
499 Ga0500594_0011477
500 Ga0500608_003447
501 Ga0500652_113999
502 Ga0500658_0003284
503 Ga0500559_0001037
504 Ga0500559_0051903
505 Ga0500568_0000500
506 Ga0500568_0001004
507 Ga0500573_0000954
508 Ga0500577_0029056
509 Ga0500616_0000837
510 Ga0500616_0007643
511 Ga0500616_0111787
512 Ga0500616_0116268
513 Ga0500622_0000116
514 Ga0500636_0001292
515 Ga0500636_0094728
516 2510132145
517 2510898477
518 2511132706
519 2513568977
520 2513580005
521 2513635727
522 2513709363
523 2514023060
524 2514591167
525 2515111122
526 2515639283
527 2515642742
528 2515658743
529 2515743945
530 2517039772
531 2517075290
532 2517093895
533 2517405710
534 2523470171
535 2585275481
536 2585525482
537 2585562663
538 2585899307
539 2585906169
540 2587981591
541 2599936903
542 2657681938
543 2725951130
544 2739351459
545 2766067761
546 2793353424
547 2793368304
548 2804750957
549 2819612428
550 2837653491
551 2838688793
552 2838731088
553 2838744018
554 2841857016
555 2842115956
556 2842159869
557 2842168112
558 2842183514
559 2842193507
560 2842220744
561 2842234006
562 2842245482
563 2842259868
564 2842274707
565 2842287268
566 2842306953
567 2842404536
568 2842410779
569 2842417765
570 2842696093
571 2844455318
572 2854911362
573 2857520451
574 2876374319
575 2899276446
576 2915653996
577 2919455000
578 2933572932
579 2933592085
580 2935904315
581 2936368287
582 2936376120
583 2968131671
584 2977865919
585 639647284
586 8001848026
587 8005308989
588 8005376776
589 8005461763
590 8005562979
591 8005570276
592 8018168336
593 8023687160
594 8055434083
595 8055621090
596 8056379412
597 8056384903
598 8057881821

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01841

Transglut_core

Transglutaminase-like superfamily

142

245

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3isr-assembly1.cif.gz_B the crystal structure of a putative cysteine protease from cytophaga hutchinsonii to 1.9a 0.8749 1 264
3isr-assembly1.cif.gz_B the crystal structure of a putative cysteine protease from cytophaga hutchinsonii to 1.9a 0.8347 1 264
4g2b-assembly1.cif.gz_B structure of the catalytic domain of the salmonella virulence factor ssei 0.6901 169 223
2pfr-assembly3.cif.gz_A human n-acetyltransferase 2 0.6152 117 234
2ija-assembly1.cif.gz_A human n-acetyltransferase 1 f125s mutant 0.6105 117 234
ID Description Score Start End Superfamily
3isrC01 Alpha Beta;Roll;C8orf32 fold; 0.9042 81 244 3.10.620.30
af_P9WL93_122_301_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.8403 101 246 3.10.620.30
af_O53920_94_280_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.7952 79 241 3.10.620.30
af_Q50732_135_318_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.7924 92 246 3.10.620.30
af_I6XWA9_2_176_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.785 93 224 3.10.620.30
ID Description Score Start End GO Terms
AF-A0A6P1YK39-F1-model_v4 Transglutaminase family protein 0.9922 1 269
AF-A0A0S3PQI0-F1-model_v4 Transglutaminase-like superfamily protein 0.9906 1 267
AF-A0A5C8STS3-F1-model_v4 deleted 0.9862 1 268
AF-A0A6P1YK39-F1-model_v4 Transglutaminase family protein 0.9849 1 269
AF-A0A2D8K562-F1-model_v4 Transglutaminase 0.9848 1 266

Map