F395239

General Info

Members Datasets Scaffolds Average Seq Length
300 226 600 508

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100083590|Ga0070708_1000835901
Length 555
Sequence MGSAWEMNARSWSVFGRHPFPLLGFMAEQSRESSAPPASIDGPVLALRGVSKSFPGVRALTDVSFDVHPGEVHALLGENGAGKSTLIKIVSGVYPPDAGEIAVEGKLVRFLSPREAQSQGIATIYQEFSLYPELSVAENIFAGHMPRTLGGFALDWRRAAKEAAAVLESLDAGDLDVNARVGTLSVGNRQRVEIAKALSRRARILILDEPTAVLTQHDADRLFAIIRRLAAQKVAVIYISHRLVEIFALANRVTVLRDGNLVAIKPVSETKESELIRLMVGRALEEEPVSHAERSVKRGPLLLRGRNLARRPMLRDASLELYAGEIVGLAGLIGSGRSELAQAIFGVMPPESGTVELEGREVRIKRPEDAMELGIAYVPEDRQRQGLITAMTVGENIGMTRLSALKKGPFIDFKAEDALAREYIDKLRIKTPHSRQVARNLSGGNQQKIVVGKWLATSPRILIVDEPTRGIDVGARAEIHRLLDALARERGLAILVISSDLPEIMRLSDRILVMREGLVVAEFQRKEATQEAVITAALGRHTAEVAGAQTHETTH

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
6 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
59 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
63 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
64 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
66 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
86 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
87 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
88 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
89 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
90 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
96 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
97 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
98 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
99 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
107 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
108 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
109 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
110 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
111 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
112 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
113 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
114 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
117 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
118 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
119 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
120 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
121 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
122 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
123 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
124 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
125 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
126 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
127 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
128 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
129 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
132 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
133 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
134 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
135 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
141 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
142 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
143 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
146 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
147 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
152 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
153 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
154 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
155 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
156 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
159 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
160 3300053097 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 endosphere Metagenome Endosphere
161 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
162 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
163 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
164 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
165 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
166 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
167 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
168 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
169 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
170 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
171 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
172 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
173 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
174 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
175 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
176 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
177 2508501125 Burkholderia sp. WSM2232 Isolate Nodule
178 2510065059 Mesorhizobium ciceri WSM4083 Isolate Nodule
179 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
180 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule
181 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
182 2643221550 Mesorhizobium sp. Root552 Isolate Unclassified
183 2643221580 Devosia sp. Root635 Isolate Unclassified
184 2643221623 Aminobacter sp. DSM 101952 Root100 Isolate Unclassified
185 2643221736 Bosea sp. Root483D1 Isolate Unclassified
186 2738541296 Paraburkholderia sp. GV073 Isolate Unclassified
187 2738541298 Paraburkholderia sp. GV068 Isolate Unclassified
188 2738541306 Paraburkholderia sp. GV052 Isolate Unclassified
189 2738543002 Paraburkholderia sp. GV072 Isolate Unclassified
190 2738543008 Paraburkholderia sp. GV060 Isolate Unclassified
191 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
192 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
193 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
194 2791355123 Mesorhizobium sophorae ICMP 19535 Isolate Unclassified
195 2834578030 Paracoccus thiocyanatus SST Isolate Unclassified
196 2837678835 Jiella endophytica CBS5Q-3 Isolate Unclassified
197 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
198 2841760612 Bosea sp. Tri-49 Isolate Nodule
199 2844002411 Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 Isolate Nodule
200 2844104063 Bosea sp. Tri-39 Isolate Nodule
201 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
202 2851182111 Bosea sp. Tri-44 Isolate Nodule
203 2851246043 Bosea sp. Tri-54 Isolate Nodule
204 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
205 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
206 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
207 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
208 2899275550 Paracoccus hibiscisoli CCTCC AB2016182 Isolate Rhizosphere
209 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
210 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
211 2909042592 Labrys sp. LIt4 Isolate Nodule
212 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
213 2932794094 Bradyrhizobium sp. S3.2.6 Isolate Nodule
214 2932801729 Bradyrhizobium sp. S3.3.6 Isolate Nodule
215 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
216 2935883170 Bradyrhizobium sp. S3.12.5 Isolate Nodule
217 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
218 2945934425 Paraburkholderia graminis W1I13 Isolate Rhizosphere
219 2990703756 Paraburkholderia graminis SLBN-33 Isolate Rhizosphere
220 641736151 Paraburkholderia graminis C4D1M Isolate Rhizoplane
221 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
222 8019648815 Bradyrhizobium sp. GM24.11 Isolate Nodule
223 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
224 8056967851 Bradyrhizobium zhengyangense WYCCWR 12678 Isolate Nodule
225 8057132660 Paracoccus rhizosphaerae LMG 21293 Isolate Rhizosphere
226 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 83
Metatranscriptomes 0.33
Isolates 16.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.33
Nodule 6.33
Rhizoplane 0.67
Rhizosphere 62
Stem 0
Stem Tuber 0
Unclassified 0.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100083590 3300005445 Bacteria 2895
2 JGI24740J21852_10001453 3300001979 Bacteria 10861
3 JGI24739J22299_10002816 3300001989 Bacteria 6675
4 JGI24735J21928_10001918 3300002067 Bacteria 7295
5 JGI24738J21930_10001005 3300002075 Bacteria 8063
6 JGI25159J45721_1005422 3300002987 Bacteria 4006
7 Ga0065165_1000146 3300005262 Bacteria 122774
8 Ga0070658_10035284 3300005327 Bacteria 4028
9 Ga0070660_100011115 3300005339 Bacteria 6384
10 Ga0070660_100063208 3300005339 Bacteria 2877
11 Ga0070668_100012486 3300005347 Bacteria 6328
12 Ga0070675_100031540 3300005354 Bacteria 4285
13 Ga0070709_10008153 3300005434 Bacteria 5750
14 Ga0070713_100000833 3300005436 Bacteria 19706
15 Ga0070713_100055218 3300005436 Bacteria 3299
16 Ga0070710_10021030 3300005437 Bacteria 3395
17 Ga0070700_100025246 3300005441 Bacteria 3499
18 Ga0070708_100023528 3300005445 Bacteria 5241
19 Ga0068867_100203461 3300005459 Bacteria 1586
20 Ga0070706_100004580 3300005467 Bacteria 13272
21 Ga0070707_100063754 3300005468 Bacteria 3537
22 Ga0070698_100001319 3300005471 Bacteria 27640
23 Ga0070699_100010199 3300005518 Bacteria 8126
24 Ga0070699_100108400 3300005518 Bacteria 2437
25 Ga0070697_100014552 3300005536 Bacteria 6179
26 Ga0070697_100020220 3300005536 Bacteria 5264
27 Ga0070665_100001047 3300005548 Bacteria 34629
28 Ga0070664_100028265 3300005564 Bacteria 4665
29 Ga0068857_100157900 3300005577 Bacteria 2057
30 Ga0068859_100100332 3300005617 Bacteria 2950
31 Ga0068859_100178103 3300005617 Bacteria 2208
32 Ga0068859_100204265 3300005617 Bacteria 2061
33 Ga0068864_100124326 3300005618 Bacteria 2310
34 Ga0068861_100010089 3300005719 Bacteria 6548
35 Ga0068861_100041053 3300005719 Bacteria 3464
36 Ga0068863_100013487 3300005841 Bacteria 7882
37 Ga0068860_100000179 3300005843 Bacteria 102844
38 Ga0068860_100132273 3300005843 Bacteria 2395
39 Ga0068862_100016125 3300005844 Bacteria 6215
40 Ga0068862_100116902 3300005844 Bacteria 2347
41 Ga0081538_10002811 3300005981 Bacteria 16677
42 Ga0081538_10016910 3300005981 Bacteria 5564
43 Ga0081539_10000730 3300005985 Bacteria 65842
44 Ga0070717_10015225 3300006028 Bacteria 5935
45 Ga0075363_100006393 3300006048 Bacteria 5345
46 Ga0070716_100036054 3300006173 Bacteria 2724
47 Ga0075362_10000955 3300006177 Bacteria 8833
48 Ga0075366_10006347 3300006195 Bacteria 6474
49 Ga0075431_100018139 3300006847 Bacteria 7160
50 Ga0075433_10054257 3300006852 Bacteria 3496
51 Ga0075436_100000121 3300006914 Bacteria 46210
52 Ga0097620_100100332 3300006931 Bacteria 2950
53 Ga0097620_100178113 3300006931 Bacteria 2208
54 Ga0097620_100204281 3300006931 Bacteria 2061
55 Ga0075435_100000087 3300007076 Bacteria 48995
56 Ga0075435_100009080 3300007076 Bacteria 7173
57 Ga0099794_10000291 3300007265 Bacteria 17263
58 Ga0105240_10007209 3300009093 Bacteria 16191
59 Ga0105240_10010037 3300009093 Bacteria 13335
60 Ga0111539_10036990 3300009094 Bacteria 5898
61 Ga0105245_10012954 3300009098 Bacteria 7270
62 Ga0105247_10012495 3300009101 Bacteria 5100
63 Ga0105241_10005565 3300009174 Bacteria 9303
64 Ga0105241_10055466 3300009174 Bacteria 3036
65 Ga0105237_10003125 3300009545 Bacteria 19928
66 Ga0105237_10026814 3300009545 Bacteria 5889
67 Ga0105238_10028717 3300009551 Bacteria 5665
68 Ga0105238_10076448 3300009551 Bacteria 3339
69 Ga0105238_10165071 3300009551 Bacteria 2190
70 Ga0105239_10011930 3300010375 Bacteria 9691
71 Ga0105239_10023170 3300010375 Bacteria 6843
72 Ga0105239_10040239 3300010375 Bacteria 5122
73 Ga0157373_10002203 3300013100 Bacteria 14749
74 Ga0157370_10012592 3300013104 Bacteria 8766
75 Ga0157374_10000039 3300013296 Bacteria 164906
76 Ga0163163_10081192 3300014325 Bacteria 3244
77 Ga0157380_10001284 3300014326 Bacteria 16330
78 Ga0157379_10013689 3300014968 Bacteria 7108
79 Ga0182006_1000007 3300015261 Bacteria 452190
80 Ga0182006_1019623 3300015261 Bacteria 2844
81 Ga0213872_10004420 3300021361 Bacteria 7468
82 Ga0213872_10010891 3300021361 Bacteria 4316
83 Ga0213872_10020394 3300021361 Bacteria 3055
84 Ga0213876_10002813 3300021384 Bacteria 10124
85 Ga0213876_10002967 3300021384 Bacteria 9832
86 Ga0209148_1000474 3300025254 Bacteria 42596
87 Ga0209759_1000686 3300025256 Bacteria 30494
88 Ga0209233_1001215 3300025261 Bacteria 10373
89 Ga0209233_1001484 3300025261 Bacteria 9239
90 Ga0209455_1001414 3300025272 Bacteria 10881
91 Ga0209455_1001975 3300025272 Bacteria 8429
92 Ga0209130_1000373 3300025284 Bacteria 50603
93 Ga0207692_10006581 3300025898 Bacteria 4721
94 Ga0207647_10003365 3300025904 Bacteria 11994
95 Ga0207647_10004407 3300025904 Bacteria 10438
96 Ga0207684_10004594 3300025910 Bacteria 12974
97 Ga0207684_10091052 3300025910 Bacteria 2599
98 Ga0207654_10005190 3300025911 Bacteria 6572
99 Ga0207695_10000008 3300025913 Bacteria 1058268
100 Ga0207695_10022442 3300025913 Bacteria 7162
101 Ga0207695_10077862 3300025913 Bacteria 3366
102 Ga0207671_10015312 3300025914 Bacteria 6011
103 Ga0207671_10072070 3300025914 Bacteria 2578
104 Ga0207663_10027449 3300025916 Bacteria 3319
105 Ga0207657_10004901 3300025919 Bacteria 14075
106 Ga0207659_10016034 3300025926 Bacteria 4869
107 Ga0207700_10029248 3300025928 Bacteria 3885
108 Ga0207670_10008281 3300025936 Bacteria 5861
109 Ga0207665_10008400 3300025939 Bacteria 6812
110 Ga0207665_10015207 3300025939 Bacteria 5054
111 Ga0207679_10069205 3300025945 Bacteria 2655
112 Ga0207708_10010510 3300026075 Bacteria 6870
113 Ga0207708_10044019 3300026075 Bacteria 3401
114 Ga0207675_100002146 3300026118 Bacteria 19587
115 Ga0207675_100020764 3300026118 Bacteria 6123
116 Ga0268266_10027212 3300028379 Bacteria 4864
117 Ga0268265_10062965 3300028380 Bacteria 2852
118 Ga0268264_10000153 3300028381 Bacteria 157298
119 Ga0307515_10013075 3300028794 Bacteria 15542
120 Ga0307511_10047284 3300030521 Bacteria 3523
121 Ga0307511_10092661 3300030521 Bacteria 2036
122 Ga0307513_10006865 3300031456 Bacteria 14820
123 Ga0307513_10098399 3300031456 Bacteria 2957
124 Ga0307509_10050606 3300031507 Bacteria 4446
125 Ga0307408_100028627 3300031548 Bacteria 3852
126 Ga0307508_10008420 3300031616 Bacteria 9526
127 Ga0307508_10138727 3300031616 Bacteria 2035
128 Ga0307516_10032493 3300031730 Bacteria 5255
129 Ga0307412_10000064 3300031911 Bacteria 125607
130 Ga0307412_10156102 3300031911 Bacteria 1689
131 Ga0307409_100037587 3300031995 Bacteria 3570
132 Ga0307409_100210889 3300031995 Bacteria 1745
133 Ga0307416_100089362 3300032002 Bacteria 2637
134 Ga0307416_100111894 3300032002 Bacteria 2408
135 Ga0307416_100172185 3300032002 Bacteria 2017
136 Ga0307415_100010113 3300032126 Bacteria 5326
137 Ga0307415_100040373 3300032126 Bacteria 3091
138 Ga0307507_10079308 3300033179 Bacteria 2903
139 Ga0307510_10007145 3300033180 Bacteria 13293
140 Ga0373935_0056124 3300035692 Bacteria 2510
141 Ga0372808_004680 3300036459 Bacteria 1762
142 Ga0316582_0006002 3300036647 Bacteria 6327
143 Ga0373925_0085206 3300037068 Bacteria 2409
144 Ga0395900_0045584 3300037418 Bacteria 4516
145 Ga0395900_0058920 3300037418 Bacteria 3953
146 Ga0395898_0005946 3300037466 Bacteria 13104
147 Ga0395905_0010572 3300037471 Bacteria 8964
148 Ga0395905_0042730 3300037471 Bacteria 4252
149 Ga0436364_0042667 3300037853 Bacteria 3300
150 Ga0395901_0036569 3300038443 Bacteria 5076
151 Ga0395901_0045811 3300038443 Bacteria 4540
152 Ga0400483_106802 3300039062 Bacteria 34933
153 Ga0400483_116340 3300039062 Bacteria 20886
154 Ga0400483_270541 3300039062 Bacteria 2846
155 Ga0400483_284775 3300039062 Bacteria 38019
156 Ga0436365_0284992 3300039437 Bacteria 3424
157 Ga0436365_1712468 3300039437 Bacteria 26288
158 Ga0436365_1901473 3300039437 Bacteria 17052
159 Ga0436360_0157251 3300039438 Bacteria 1625
160 Ga0436360_0545004 3300039438 Bacteria 3788
161 Ga0436360_0716162 3300039438 Bacteria 6576
162 Ga0436360_1063642 3300039438 Bacteria 4207
163 Ga0436361_0015436 3300039447 Unclassified 1923
164 Ga0436361_0380942 3300039447 Bacteria 7014
165 Ga0436361_0708342 3300039447 Bacteria 2965
166 Ga0436361_0925550 3300039447 Bacteria 1828
167 Ga0436361_1137116 3300039447 Bacteria 5479
168 Ga0439433_0009730 3300041999 Bacteria 2098
169 Ga0439448_0000022 3300042005 Bacteria 26210
170 Ga0439449_0003673 3300042007 Bacteria 5955
171 Ga0453683_0006568 3300044673 Bacteria 7968
172 Ga0453683_0012595 3300044673 Bacteria 5541
173 Ga0466961_0103692 3300044693 Bacteria 1791
174 Ga0466959_0065598 3300045049 Bacteria 2635
175 Ga0495596_0011651 3300046500 Bacteria 3784
176 Ga0495606_0026864 3300046507 Bacteria 4092
177 Ga0495610_0002008 3300046512 Bacteria 17407
178 Ga0495649_0006114 3300046694 Bacteria 7525
179 Ga0495649_0033055 3300046694 Bacteria 2847
180 Ga0495589_0021915 3300046794 Bacteria 3264
181 Ga0495600_0109453 3300046809 Bacteria 1799
182 Ga0495672_0005574 3300047320 Bacteria 9953
183 Ga0495683_0058767 3300047323 Bacteria 1909
184 Ga0495687_000005 3300047443 Bacteria 610401
185 Ga0495687_010802 3300047443 Bacteria 4970
186 Ga0495686_0000099 3300047472 Bacteria 180546
187 Ga0495626_0025303 3300048091 Bacteria 2904
188 Ga0496104_0013840 3300048907 Bacteria 7278
189 Ga0496117_0005831 3300048920 Bacteria 12760
190 Ga0496117_0010326 3300048920 Bacteria 8534
191 Ga0496117_0107635 3300048920 Bacteria 1746
192 Ga0496118_0014900 3300048921 Bacteria 7242
193 Ga0496121_0000769 3300048924 Bacteria 58817
194 Ga0496121_0016479 3300048924 Bacteria 7628
195 Ga0496121_0059083 3300048924 Bacteria 3164
196 Ga0496122_0021359 3300048925 Bacteria 5798
197 Ga0496123_0001385 3300048926 Bacteria 33978
198 Ga0496124_0003608 3300048927 Bacteria 18803
199 Ga0496126_0015785 3300048929 Bacteria 7586
200 Ga0496126_0036909 3300048929 Bacteria 4566
201 Ga0496126_0042686 3300048929 Bacteria 4187
202 Ga0501032_0001706 3300049569 Bacteria 17374
203 Ga0501033_0000009 3300049570 Bacteria 272351
204 Ga0501034_0177056 3300049571 Bacteria 2099
205 Ga0501036_0096620 3300049572 Bacteria 2498
206 Ga0501041_0044309 3300049577 Bacteria 2705
207 Ga0501067_0040433 3300049583 Bacteria 2590
208 Ga0501068_0000435 3300049584 Bacteria 21217
209 Ga0501071_0005500 3300049587 Bacteria 8153
210 Ga0501071_0008251 3300049587 Bacteria 6877
211 Ga0501072_0015866 3300049588 Bacteria 5775
212 Ga0501072_0036451 3300049588 Bacteria 3856
213 Ga0501072_0182758 3300049588 Bacteria 1673
214 Ga0501073_0001736 3300049589 Bacteria 16195
215 Ga0501074_0003164 3300049590 Bacteria 11608
216 Ga0501076_0130136 3300049592 Bacteria 2041
217 Ga0501077_0002768 3300049593 Bacteria 10516
218 Ga0501080_0000921 3300049742 Bacteria 24022
219 Ga0501083_0059341 3300049744 Bacteria 2559
220 Ga0501045_0008293 3300049824 Bacteria 7234
221 nmdc:mga03683_1761_c1 3300050489 Bacteria 6546
222 nmdc:mga03n38_961_c1 3300050490 Bacteria 7825
223 nmdc:mga06z11_31633_c1 3300050494 Bacteria 2573
224 nmdc:mga06r32_3328_c1 3300050510 Bacteria 14405
225 nmdc:mga0n895_3565_c1 3300050512 Bacteria 12591
226 nmdc:mga0rr50_66_c1 3300050513 Bacteria 62784
227 nmdc:mga08x19_316_c1 3300050514 Bacteria 35190
228 Ga0500566_0000005 3300053094 Bacteria 159299
229 Ga0500640_000097 3300053095 Bacteria 15377
230 Ga0500648_025379 3300053097 Bacteria 3313
231 Ga0500555_000152 3300053103 Bacteria 33050
232 Ga0500556_0000171 3300053104 Bacteria 53169
233 Ga0500562_000722 3300053108 Bacteria 8006
234 Ga0500572_000165 3300053111 Bacteria 22976
235 Ga0500572_000219 3300053111 Bacteria 20348
236 Ga0500614_001150 3300053123 Bacteria 6500
237 Ga0500642_0004139 3300053130 Bacteria 4491
238 Ga0500559_0000241 3300053136 Bacteria 43480
239 Ga0500559_0000822 3300053136 Bacteria 20135
240 Ga0500590_053534 3300053148 Bacteria 2046
241 Ga0500603_001056 3300053150 Bacteria 6479
242 Ga0500603_006175 3300053150 Bacteria 2600
243 Ga0500638_046522 3300053162 Bacteria 2103
244 Ga0500639_000023 3300053163 Bacteria 85696
245 Ga0500596_000964 3300053735 Bacteria 5733
246 Ga0500601_001885 3300053737 Bacteria 2251
247 Ga0500661_000829 3300055283 Bacteria 5761
248 Ga0590071_001913 3300059421 Bacteria 5334
249 Ga0590071_006943 3300059421 Bacteria 2684
250 Ga0501082_0084658 3300060353 Bacteria 2734
251 2509132004 2508501125 Bacteria 7208311
252 2510316918 2510065059 Bacteria 6847884
253 2513639513 2513237094 Bacteria 8789602
254 2513721417 2513237104 Bacteria 10034502
255 2523466993 2523231067 Bacteria 5230452
256 2643772564 2643221550 Bacteria 4619371
257 2643910862 2643221580 Bacteria 3816678
258 2644129787 2643221623 Bacteria 5239945
259 2644743998 2643221736 Bacteria 6608466
260 2738823629 2738541296 Bacteria 7285013
261 2738836107 2738541298 Bacteria 7286732
262 2738877637 2738541306 Bacteria 7284992
263 2739189256 2738543002 Bacteria 7284546
264 2739224230 2738543008 Bacteria 7282815
265 2739348588 2738543031 Bacteria 5769731
266 2776267082 2775506902 Bacteria 6208009
267 2776283443 2775506904 Bacteria 5954060
268 2792745572 2791355123 Bacteria 8049106
269 2834581842 2834578030 Bacteria 3530182
270 2837681315 2837678835 Bacteria 5252418
271 2840770247 2840764183 Bacteria 6358399
272 2841764169 2841760612 Bacteria 6454112
273 2844005145 2844002411 Bacteria 7168230
274 2844108376 2844104063 Bacteria 6440972
275 2844319559 2844315083 Bacteria 8138177
276 2851185485 2851182111 Bacteria 6047226
277 2851250604 2851246043 Bacteria 6439203
278 2854900611 2854896431 Bacteria 5869725
279 2854921088 2854916844 Bacteria 5725939
280 2857363572 2857357740 Bacteria 9937880
281 2898798374 2898795034 Bacteria 4294459
282 2899275749 2899275550 Bacteria 3958688
283 2903734496 2903727486 Bacteria 8281579
284 2906609291 2906602504 Bacteria 8295279
285 2909045435 2909042592 Bacteria 6499737
286 2919451047 2919450847 Bacteria 5631160
287 2932795548 2932794094 Bacteria 7915132
288 2932807856 2932801729 Bacteria 7987968
289 2933021789 2933016740 Bacteria 6355406
290 2935886033 2935883170 Bacteria 7964738
291 2941534929 2941531003 Bacteria 7653939
292 2945940828 2945934425 Bacteria 7444609
293 2990708048 2990703756 Bacteria 7715990
294 642421867 641736151 Bacteria 7477263
295 8001847736 8001845381 Bacteria 5804942
296 8019659186 8019648815 Bacteria 10014479
297 8054560427 8054558443 Bacteria 5204801
298 8056968552 8056967851 Bacteria 9038162
299 8057135922 8057132660 Bacteria 4061191
300 8057533748 8057529695 Bacteria 6306553
301 Ga0070708_100083590
302 JGI24740J21852_10001453
303 JGI24739J22299_10002816
304 JGI24735J21928_10001918
305 JGI24738J21930_10001005
306 JGI25159J45721_1005422
307 Ga0065165_1000146
308 Ga0070658_10035284
309 Ga0070660_100011115
310 Ga0070660_100063208
311 Ga0070668_100012486
312 Ga0070675_100031540
313 Ga0070709_10008153
314 Ga0070713_100000833
315 Ga0070713_100055218
316 Ga0070710_10021030
317 Ga0070700_100025246
318 Ga0070708_100023528
319 Ga0068867_100203461
320 Ga0070706_100004580
321 Ga0070707_100063754
322 Ga0070698_100001319
323 Ga0070699_100010199
324 Ga0070699_100108400
325 Ga0070697_100014552
326 Ga0070697_100020220
327 Ga0070665_100001047
328 Ga0070664_100028265
329 Ga0068857_100157900
330 Ga0068859_100100332
331 Ga0068859_100178103
332 Ga0068859_100204265
333 Ga0068864_100124326
334 Ga0068861_100010089
335 Ga0068861_100041053
336 Ga0068863_100013487
337 Ga0068860_100000179
338 Ga0068860_100132273
339 Ga0068862_100016125
340 Ga0068862_100116902
341 Ga0081538_10002811
342 Ga0081538_10016910
343 Ga0081539_10000730
344 Ga0070717_10015225
345 Ga0075363_100006393
346 Ga0070716_100036054
347 Ga0075362_10000955
348 Ga0075366_10006347
349 Ga0075431_100018139
350 Ga0075433_10054257
351 Ga0075436_100000121
352 Ga0097620_100100332
353 Ga0097620_100178113
354 Ga0097620_100204281
355 Ga0075435_100000087
356 Ga0075435_100009080
357 Ga0099794_10000291
358 Ga0105240_10007209
359 Ga0105240_10010037
360 Ga0111539_10036990
361 Ga0105245_10012954
362 Ga0105247_10012495
363 Ga0105241_10005565
364 Ga0105241_10055466
365 Ga0105237_10003125
366 Ga0105237_10026814
367 Ga0105238_10028717
368 Ga0105238_10076448
369 Ga0105238_10165071
370 Ga0105239_10011930
371 Ga0105239_10023170
372 Ga0105239_10040239
373 Ga0157373_10002203
374 Ga0157370_10012592
375 Ga0157374_10000039
376 Ga0163163_10081192
377 Ga0157380_10001284
378 Ga0157379_10013689
379 Ga0182006_1000007
380 Ga0182006_1019623
381 Ga0213872_10004420
382 Ga0213872_10010891
383 Ga0213872_10020394
384 Ga0213876_10002813
385 Ga0213876_10002967
386 Ga0209148_1000474
387 Ga0209759_1000686
388 Ga0209233_1001215
389 Ga0209233_1001484
390 Ga0209455_1001414
391 Ga0209455_1001975
392 Ga0209130_1000373
393 Ga0207692_10006581
394 Ga0207647_10003365
395 Ga0207647_10004407
396 Ga0207684_10004594
397 Ga0207684_10091052
398 Ga0207654_10005190
399 Ga0207695_10000008
400 Ga0207695_10022442
401 Ga0207695_10077862
402 Ga0207671_10015312
403 Ga0207671_10072070
404 Ga0207663_10027449
405 Ga0207657_10004901
406 Ga0207659_10016034
407 Ga0207700_10029248
408 Ga0207670_10008281
409 Ga0207665_10008400
410 Ga0207665_10015207
411 Ga0207679_10069205
412 Ga0207708_10010510
413 Ga0207708_10044019
414 Ga0207675_100002146
415 Ga0207675_100020764
416 Ga0268266_10027212
417 Ga0268265_10062965
418 Ga0268264_10000153
419 Ga0307515_10013075
420 Ga0307511_10047284
421 Ga0307511_10092661
422 Ga0307513_10006865
423 Ga0307513_10098399
424 Ga0307509_10050606
425 Ga0307408_100028627
426 Ga0307508_10008420
427 Ga0307508_10138727
428 Ga0307516_10032493
429 Ga0307412_10000064
430 Ga0307412_10156102
431 Ga0307409_100037587
432 Ga0307409_100210889
433 Ga0307416_100089362
434 Ga0307416_100111894
435 Ga0307416_100172185
436 Ga0307415_100010113
437 Ga0307415_100040373
438 Ga0307507_10079308
439 Ga0307510_10007145
440 Ga0373935_0056124
441 Ga0372808_004680
442 Ga0316582_0006002
443 Ga0373925_0085206
444 Ga0395900_0045584
445 Ga0395900_0058920
446 Ga0395898_0005946
447 Ga0395905_0010572
448 Ga0395905_0042730
449 Ga0436364_0042667
450 Ga0395901_0036569
451 Ga0395901_0045811
452 Ga0400483_106802
453 Ga0400483_116340
454 Ga0400483_270541
455 Ga0400483_284775
456 Ga0436365_0284992
457 Ga0436365_1712468
458 Ga0436365_1901473
459 Ga0436360_0157251
460 Ga0436360_0545004
461 Ga0436360_0716162
462 Ga0436360_1063642
463 Ga0436361_0015436
464 Ga0436361_0380942
465 Ga0436361_0708342
466 Ga0436361_0925550
467 Ga0436361_1137116
468 Ga0439433_0009730
469 Ga0439448_0000022
470 Ga0439449_0003673
471 Ga0453683_0006568
472 Ga0453683_0012595
473 Ga0466961_0103692
474 Ga0466959_0065598
475 Ga0495596_0011651
476 Ga0495606_0026864
477 Ga0495610_0002008
478 Ga0495649_0006114
479 Ga0495649_0033055
480 Ga0495589_0021915
481 Ga0495600_0109453
482 Ga0495672_0005574
483 Ga0495683_0058767
484 Ga0495687_000005
485 Ga0495687_010802
486 Ga0495686_0000099
487 Ga0495626_0025303
488 Ga0496104_0013840
489 Ga0496117_0005831
490 Ga0496117_0010326
491 Ga0496117_0107635
492 Ga0496118_0014900
493 Ga0496121_0000769
494 Ga0496121_0016479
495 Ga0496121_0059083
496 Ga0496122_0021359
497 Ga0496123_0001385
498 Ga0496124_0003608
499 Ga0496126_0015785
500 Ga0496126_0036909
501 Ga0496126_0042686
502 Ga0501032_0001706
503 Ga0501033_0000009
504 Ga0501034_0177056
505 Ga0501036_0096620
506 Ga0501041_0044309
507 Ga0501067_0040433
508 Ga0501068_0000435
509 Ga0501071_0005500
510 Ga0501071_0008251
511 Ga0501072_0015866
512 Ga0501072_0036451
513 Ga0501072_0182758
514 Ga0501073_0001736
515 Ga0501074_0003164
516 Ga0501076_0130136
517 Ga0501077_0002768
518 Ga0501080_0000921
519 Ga0501083_0059341
520 Ga0501045_0008293
521 nmdc:mga03683_1761_c1
522 nmdc:mga03n38_961_c1
523 nmdc:mga06z11_31633_c1
524 nmdc:mga06r32_3328_c1
525 nmdc:mga0n895_3565_c1
526 nmdc:mga0rr50_66_c1
527 nmdc:mga08x19_316_c1
528 Ga0500566_0000005
529 Ga0500640_000097
530 Ga0500648_025379
531 Ga0500555_000152
532 Ga0500556_0000171
533 Ga0500562_000722
534 Ga0500572_000165
535 Ga0500572_000219
536 Ga0500614_001150
537 Ga0500642_0004139
538 Ga0500559_0000241
539 Ga0500559_0000822
540 Ga0500590_053534
541 Ga0500603_001056
542 Ga0500603_006175
543 Ga0500638_046522
544 Ga0500639_000023
545 Ga0500596_000964
546 Ga0500601_001885
547 Ga0500661_000829
548 Ga0590071_001913
549 Ga0590071_006943
550 Ga0501082_0084658
551 2509132004
552 2510316918
553 2513639513
554 2513721417
555 2523466993
556 2643772564
557 2643910862
558 2644129787
559 2644743998
560 2738823629
561 2738836107
562 2738877637
563 2739189256
564 2739224230
565 2739348588
566 2776267082
567 2776283443
568 2792745572
569 2834581842
570 2837681315
571 2840770247
572 2841764169
573 2844005145
574 2844108376
575 2844319559
576 2851185485
577 2851250604
578 2854900611
579 2854921088
580 2857363572
581 2898798374
582 2899275749
583 2903734496
584 2906609291
585 2909045435
586 2919451047
587 2932795548
588 2932807856
589 2933021789
590 2935886033
591 2941534929
592 2945940828
593 2990708048
594 642421867
595 8001847736
596 8019659186
597 8054560427
598 8056968552
599 8057135922
600 8057533748

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

314

469

0.95

PF00005

ABC_tran

ABC transporter

60

212

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6z67-assembly3.cif.gz_E ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.9194 261 491
6b89-assembly1.cif.gz_A e. coli lptb in complex with adp and novobiocin 0.8995 15 233
2it1-assembly1.cif.gz_B structure of ph0203 protein from pyrococcus horikoshii 0.897 15 233
1g9x-assembly3.cif.gz_C characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter 0.8965 13 233
6z67-assembly3.cif.gz_E ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.8919 261 491
ID Description Score Start End Superfamily
af_P37388_2_240_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9707 13 246 3.40.50.300
af_P0AAF3_1_241_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9655 8 244 3.40.50.300
af_P04983_1_243_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9645 13 250 3.40.50.300
af_P04983_256_497_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9593 262 504 3.40.50.300
af_P32721_2_243_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9574 11 246 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A353RC70-F1-model_v4 Ribose/galactose/methyl galactoside import ATP-binding protein (EC 7.5.2.11) 0.9717 9 246 GO:0005524
GO:0005886
GO:0016887
GO:0043211
AF-A0A419Z768-F1-model_v4 deleted 0.9717 12 245
AF-A0A353RC70-F1-model_v4 Ribose/galactose/methyl galactoside import ATP-binding protein (EC 7.5.2.11) 0.9638 9 246 GO:0005524
GO:0005886
GO:0016887
GO:0043211
AF-A0A1R3VHH3-F1-model_v4 ATP-binding protein of sugar ABC transporter 0.9523 13 246 GO:0005524
GO:0016887
AF-A0A7X6Q8U8-F1-model_v4 Sugar ABC transporter ATP-binding protein 0.949 315 503 GO:0005524
GO:0016887

Map