F395299

General Info

Members Datasets Scaffolds Average Seq Length
300 164 281 450

Family's Representative Sequence

Representative Sequence 3300006195|Ga0075366_10010289|Ga0075366_100102891
Length 515
Sequence MAGSCRNGGCPKVVENSGFAALDSLGRNPAQFFDLFAPFSLSMHDVNSSKISVEKIGGTSMTAFGDVLRHIVLHDPKRIYGRIYVVSAYSGVTNQLLEHKKTGERGIYALFAESKGYQDALTGLAVSLKKINAGYADIGLPLAVADAFIDKRIAQAREYLGAMQHVLASGYLSRHDVLLAAREVLASIGESHSAFNSVEILKANGVKAVLMDLAGFDDNEAWTIDERIANSFKDLDLVNNVIVATGYTKGTEGIMREFDRGYSEVTFSKIAVEVRPAEAVIHKEFHLSSADPNLVGLENAIVVGATNYDVADQLADVGMEAIHPKASKPMELAGIPIRLKNTFEPDHPGTLITKDFVGERARVEIVTGTDKVTLIEIHDPSMVGTVGFDASLMQVFCKHDISYILKATNANSIAHLVWDNQVSAELLAELEELYQVVTVKPSAIVCTIGSNIGIPGVLAKAAQALADAQVNVNCVSQTLRQVNMQFVIEREDYKTAIKSLNMALCVNSGTPVPRV

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2547132374 Acidovorax radicis N35 Isolate Unclassified
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2643221570 Acidovorax sp. Root568 Isolate Unclassified
5 2643221596 Acidovorax sp. Root70 Isolate Unclassified
6 2643221652 Acidovorax sp. Root402 Isolate Unclassified
7 2643221717 Acidovorax sp. Root267 Isolate Unclassified
8 2738541283 Pedobacter sp. OK701 Isolate Unclassified
9 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
10 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
11 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
12 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
13 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
14 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
15 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
16 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
17 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
18 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
19 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
20 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
21 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
22 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
23 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
24 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
25 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
26 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
27 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
28 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
29 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
30 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
31 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
32 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
33 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
34 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
35 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
36 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
37 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
38 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
39 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
40 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
41 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
73 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
76 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
77 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
78 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
79 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
108 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
109 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
110 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
111 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
112 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
113 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
114 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
115 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
116 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
117 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
118 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
119 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
120 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
121 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
122 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
123 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
124 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
125 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
126 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
127 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
128 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
129 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
130 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
131 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
132 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
133 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
134 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
137 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
138 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
139 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
140 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
141 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
142 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
143 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
144 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
145 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
146 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
147 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
148 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
149 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
150 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
151 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
152 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
153 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
154 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
155 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
156 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
157 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
158 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
159 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
160 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
161 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
162 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
163 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
164 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.33
Metatranscriptomes 0.33
Isolates 6.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.33
Nodule 0
Rhizoplane 0.33
Rhizosphere 83.67
Stem 0
Stem Tuber 0
Unclassified 9.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_5856 2162886007 Bacteria 35436
2 JGI24740J21852_10015309 3300001979 Bacteria 2805
3 JGI24735J21928_10000002 3300002067 Bacteria 624895
4 JGI24735J21928_10001407 3300002067 Bacteria 8496
5 JGI25162J39368_1000024 3300002737 Bacteria 229507
6 JGI25164J39214_1001459 3300002772 Bacteria 5433
7 JGI25165J46597_1001051 3300003214 Bacteria 17893
8 rootH1_10101316 3300003316 Bacteria 4333
9 rootH2_10003875 3300003320 Bacteria 32454
10 rootH2_10039086 3300003320 Bacteria 26346
11 rootH2_10061859 3300003320 Bacteria 2023
12 rootH1_10002666 3300003323 Bacteria 23641
13 rootH1_10031240 3300003323 Bacteria 24555
14 Ga0065714_10002661 3300005288 Bacteria 44282
15 Ga0065704_10070204 3300005289 Bacteria 85748
16 Ga0070658_10000435 3300005327 Bacteria 36388
17 Ga0070658_10148287 3300005327 Bacteria 1963
18 Ga0070658_10165377 3300005327 Bacteria 1857
19 Ga0070680_100004490 3300005336 Bacteria 10513
20 Ga0070682_100079403 3300005337 Bacteria 2119
21 Ga0070660_100024082 3300005339 Bacteria 4516
22 Ga0070671_100000925 3300005355 Bacteria 21446
23 Ga0070659_100000090 3300005366 Bacteria 67539
24 Ga0070663_100019294 3300005455 Bacteria 4491
25 Ga0070663_100050120 3300005455 Bacteria 2968
26 Ga0070662_100001605 3300005457 Bacteria 13949
27 Ga0070681_10028041 3300005458 Bacteria 5660
28 Ga0068867_100011896 3300005459 Bacteria 6147
29 Ga0068867_100068312 3300005459 Bacteria 2652
30 Ga0068853_100006196 3300005539 Bacteria 9470
31 Ga0070665_100000367 3300005548 Bacteria 67579
32 Ga0068855_100000508 3300005563 Bacteria 48055
33 Ga0068855_100003688 3300005563 Bacteria 18736
34 Ga0068855_100018900 3300005563 Bacteria 8282
35 Ga0068854_100084101 3300005578 Bacteria 2354
36 Ga0068856_100003990 3300005614 Bacteria 14784
37 Ga0068856_100045317 3300005614 Bacteria 4330
38 Ga0068859_100117775 3300005617 Bacteria 2722
39 Ga0068861_100004031 3300005719 Bacteria 9836
40 Ga0068861_100257909 3300005719 Bacteria 1491
41 Ga0068860_100069180 3300005843 Bacteria 3355
42 Ga0075366_10009531 3300006195 Bacteria 5423
43 Ga0075366_10010289 3300006195 Bacteria 5249
44 Ga0075366_10013236 3300006195 Bacteria 4693
45 Ga0097621_100000418 3300006237 Bacteria 29674
46 Ga0068871_100000043 3300006358 Bacteria 67759
47 Ga0075430_100152265 3300006846 Bacteria 1926
48 Ga0068865_100000587 3300006881 Bacteria 20419
49 Ga0097620_100117774 3300006931 Bacteria 2722
50 Ga0105240_10000044 3300009093 Bacteria 250257
51 Ga0105240_10000294 3300009093 Bacteria 97108
52 Ga0105240_10002753 3300009093 Bacteria 27789
53 Ga0105240_10003133 3300009093 Bacteria 26043
54 Ga0105240_10014428 3300009093 Bacteria 10787
55 Ga0105240_10015079 3300009093 Bacteria 10520
56 Ga0105240_10059393 3300009093 Unclassified 4773
57 Ga0105240_10227086 3300009093 Bacteria 2172
58 Ga0105240_10411336 3300009093 Bacteria 1521
59 Ga0105243_10108276 3300009148 Unclassified 2319
60 Ga0105242_10103501 3300009176 Bacteria 2416
61 Ga0105237_10003309 3300009545 Bacteria 19208
62 Ga0105237_10006634 3300009545 Bacteria 12791
63 Ga0105237_10008392 3300009545 Bacteria 11195
64 Ga0105237_10029038 3300009545 Bacteria 5625
65 Ga0105238_10025196 3300009551 Bacteria 6062
66 Ga0105249_10070588 3300009553 Bacteria 3225
67 Ga0105239_10000013 3300010375 Bacteria 327371
68 Ga0105239_10000530 3300010375 Bacteria 55219
69 Ga0105239_10001207 3300010375 Bacteria 35283
70 Ga0105239_10001460 3300010375 Bacteria 31458
71 Ga0105239_10001782 3300010375 Bacteria 28318
72 Ga0105239_10004158 3300010375 Bacteria 17380
73 Ga0105239_10005833 3300010375 Bacteria 14354
74 Ga0105239_10006888 3300010375 Bacteria 13111
75 Ga0105239_10066595 3300010375 Bacteria 3957
76 Ga0105239_10091218 3300010375 Bacteria 3362
77 Ga0157373_10000094 3300013100 Bacteria 73332
78 Ga0157373_10000152 3300013100 Bacteria 55831
79 Ga0157373_10000545 3300013100 Bacteria 29511
80 Ga0157373_10000702 3300013100 Bacteria 26252
81 Ga0157373_10071681 3300013100 Bacteria 2447
82 Ga0157371_10001365 3300013102 Bacteria 25626
83 Ga0157371_10003100 3300013102 Bacteria 15401
84 Ga0157371_10014307 3300013102 Bacteria 5993
85 Ga0157371_10145057 3300013102 Bacteria 1691
86 Ga0157370_10001434 3300013104 Bacteria 29542
87 Ga0157370_10030266 3300013104 Bacteria 5305
88 Ga0157370_10080663 3300013104 Bacteria 3063
89 Ga0157370_10127864 3300013104 Bacteria 2371
90 Ga0157369_10001277 3300013105 Bacteria 31285
91 Ga0157369_10082913 3300013105 Bacteria 3430
92 Ga0157369_10234927 3300013105 Bacteria 1916
93 Ga0157374_10000393 3300013296 Bacteria 39683
94 Ga0157374_10000575 3300013296 Bacteria 32602
95 Ga0157378_10019492 3300013297 Bacteria 5964
96 Ga0157378_10100842 3300013297 Bacteria 2636
97 Ga0163162_10000457 3300013306 Bacteria 37808
98 Ga0163162_10042090 3300013306 Bacteria 4570
99 Ga0157372_10000087 3300013307 Bacteria 95840
100 Ga0157372_10002387 3300013307 Bacteria 20334
101 Ga0157372_10024517 3300013307 Bacteria 6554
102 Ga0157372_10245272 3300013307 Bacteria 2079
103 Ga0157375_10003673 3300013308 Bacteria 13321
104 Ga0163163_10009471 3300014325 Bacteria 8697
105 Ga0163163_10015148 3300014325 Bacteria 7119
106 Ga0182008_10000100 3300014497 Bacteria 66862
107 Ga0182006_1000001 3300015261 Bacteria 1091090
108 Ga0182006_1001055 3300015261 Bacteria 17793
109 Ga0182006_1013963 3300015261 Bacteria 3470
110 Ga0163161_10001118 3300017792 Bacteria 20239
111 Ga0163161_10001475 3300017792 Bacteria 17381
112 Ga0163161_10006396 3300017792 Bacteria 8157
113 Ga0163161_10022162 3300017792 Bacteria 4470
114 Ga0207427_100103 3300025231 Bacteria 119618
115 Ga0209437_100017 3300025233 Bacteria 694471
116 Ga0209437_100101 3300025233 Bacteria 226668
117 Ga0209026_1000301 3300025250 Bacteria 53883
118 Ga0209026_1007722 3300025250 Bacteria 2361
119 Ga0209233_1000124 3300025261 Bacteria 226743
120 Ga0209233_1002218 3300025261 Bacteria 7286
121 Ga0207647_10000159 3300025904 Bacteria 53276
122 Ga0207647_10000495 3300025904 Bacteria 31517
123 Ga0207645_10000205 3300025907 Bacteria 48288
124 Ga0207705_10000043 3300025909 Bacteria 181491
125 Ga0207705_10016150 3300025909 Bacteria 5358
126 Ga0207705_10136261 3300025909 Bacteria 1831
127 Ga0207654_10068093 3300025911 Bacteria 2105
128 Ga0207707_10189994 3300025912 Bacteria 1792
129 Ga0207695_10000013 3300025913 Bacteria 821265
130 Ga0207695_10000142 3300025913 Bacteria 214715
131 Ga0207695_10002377 3300025913 Bacteria 27917
132 Ga0207695_10004011 3300025913 Bacteria 20270
133 Ga0207695_10008683 3300025913 Bacteria 12675
134 Ga0207695_10011050 3300025913 Bacteria 10971
135 Ga0207695_10024200 3300025913 Bacteria 6838
136 Ga0207695_10060795 3300025913 Bacteria 3908
137 Ga0207671_10002230 3300025914 Bacteria 21000
138 Ga0207671_10006081 3300025914 Bacteria 10868
139 Ga0207671_10010431 3300025914 Bacteria 7664
140 Ga0207671_10021607 3300025914 Bacteria 4878
141 Ga0207671_10046256 3300025914 Unclassified 3219
142 Ga0207660_10038334 3300025917 Bacteria 3345
143 Ga0207657_10027444 3300025919 Bacteria 5214
144 Ga0207657_10078964 3300025919 Bacteria 2770
145 Ga0207652_10189372 3300025921 Bacteria 1850
146 Ga0207694_10104096 3300025924 Bacteria 2252
147 Ga0207644_10056780 3300025931 Bacteria 2825
148 Ga0207690_10000261 3300025932 Bacteria 37964
149 Ga0207690_10011599 3300025932 Bacteria 5266
150 Ga0207706_10000553 3300025933 Bacteria 39805
151 Ga0207686_10144067 3300025934 Bacteria 1650
152 Ga0207704_10000341 3300025938 Bacteria 21653
153 Ga0207689_10084480 3300025942 Bacteria 2609
154 Ga0207667_10000037 3300025949 Bacteria 297252
155 Ga0207667_10005643 3300025949 Bacteria 15264
156 Ga0207651_10024816 3300025960 Bacteria 3715
157 Ga0207712_10061000 3300025961 Bacteria 2675
158 Ga0207640_10070275 3300025981 Bacteria 2354
159 Ga0207639_10039442 3300026041 Bacteria 3519
160 Ga0207678_10005366 3300026067 Bacteria 11480
161 Ga0207678_10020321 3300026067 Bacteria 5827
162 Ga0207702_10000196 3300026078 Bacteria 71703
163 Ga0207702_10017491 3300026078 Bacteria 5931
164 Ga0207702_10080194 3300026078 Unclassified 2831
165 Ga0207648_10071267 3300026089 Bacteria 3029
166 Ga0207675_100009245 3300026118 Bacteria 9244
167 Ga0268266_10000053 3300028379 Bacteria 295181
168 Ga0268264_10034408 3300028381 Bacteria 4168
169 Ga0307517_10000515 3300028786 Bacteria 66157
170 Ga0307515_10000927 3300028794 Bacteria 67260
171 Ga0307515_10001771 3300028794 Bacteria 48123
172 Ga0307509_10065956 3300031507 Bacteria 3799
173 Ga0307408_100000319 3300031548 Bacteria 46191
174 Ga0316576_10027479 3300031727 Bacteria 4002
175 Ga0316576_10043193 3300031727 Bacteria 3251
176 Ga0316578_10018949 3300031728 Bacteria 3781
177 Ga0316578_10044207 3300031728 Bacteria 2590
178 Ga0316577_10032291 3300031733 Bacteria 2925
179 Ga0307406_10000374 3300031901 Bacteria 25802
180 Ga0307412_10000023 3300031911 Bacteria 237005
181 Ga0307412_10000058 3300031911 Bacteria 140824
182 Ga0307416_100000006 3300032002 Bacteria 466074
183 Ga0307414_10000666 3300032004 Bacteria 17595
184 Ga0307507_10000064 3300033179 Bacteria 161226
185 Ga0307510_10002629 3300033180 Bacteria 20503
186 Ga0307510_10002869 3300033180 Bacteria 19823
187 Ga0316596_1007190 3300033541 Bacteria 2625
188 Ga0316574_0007305 3300035398 Bacteria 6048
189 Ga0316574_0141122 3300035398 Unclassified 1552
190 Ga0316584_0026782 3300036712 Bacteria 4240
191 Ga0316584_0058182 3300036712 Unclassified 2894
192 Ga0395899_0000034 3300037312 Bacteria 302623
193 Ga0395899_0000204 3300037312 Bacteria 87147
194 Ga0395899_0001241 3300037312 Bacteria 22209
195 Ga0395900_0000812 3300037418 Bacteria 41307
196 Ga0395900_0001195 3300037418 Bacteria 32119
197 Ga0395900_0070818 3300037418 Bacteria 3584
198 Ga0395898_0061101 3300037466 Bacteria 3661
199 Ga0395905_0000686 3300037471 Bacteria 44822
200 Ga0395905_0000896 3300037471 Bacteria 38873
201 Ga0395901_0001468 3300038443 Bacteria 24531
202 Ga0395901_0004519 3300038443 Bacteria 14031
203 Ga0395901_0120757 3300038443 Bacteria 2754
204 Ga0400483_092167 3300039062 Bacteria 9535
205 Ga0400483_217432 3300039062 Bacteria 35275
206 Ga0451577_0000119 3300042876 Bacteria 172779
207 Ga0451577_0008371 3300042876 Bacteria 10065
208 Ga0451577_0091533 3300042876 Unclassified 2715
209 Ga0466972_0054093 3300044658 Bacteria 1932
210 Ga0453683_0000446 3300044673 Bacteria 47489
211 Ga0453683_0004432 3300044673 Bacteria 9963
212 Ga0453683_0012367 3300044673 Bacteria 5592
213 Ga0453683_0025697 3300044673 Bacteria 3738
214 Ga0453684_0000258 3300044712 Bacteria 228312
215 Ga0453684_0000793 3300044712 Bacteria 108286
216 Ga0453684_0001000 3300044712 Bacteria 91796
217 Ga0453684_0002217 3300044712 Bacteria 48276
218 Ga0453684_0003363 3300044712 Bacteria 36173
219 Ga0453684_0015396 3300044712 Bacteria 12107
220 Ga0453684_0021409 3300044712 Bacteria 9661
221 Ga0453684_0028366 3300044712 Bacteria 7989
222 Ga0453684_0032753 3300044712 Bacteria 7262
223 Ga0453684_0035046 3300044712 Bacteria 6948
224 Ga0453684_0083407 3300044712 Bacteria 3978
225 Ga0453684_0140629 3300044712 Bacteria 2883
226 Ga0453684_0190767 3300044712 Bacteria 2397
227 Ga0453684_0203340 3300044712 Bacteria 2307
228 Ga0453684_0347007 3300044712 Bacteria 1675
229 Ga0466970_0031602 3300044765 Bacteria 2797
230 Ga0466959_0013504 3300045049 Bacteria 5919
231 Ga0466959_0044036 3300045049 Bacteria 3289
232 Ga0466959_0131726 3300045049 Bacteria 1772
233 Ga0451576_0005178 3300045051 Bacteria 16493
234 Ga0451576_0022059 3300045051 Bacteria 6909
235 Ga0451576_0052976 3300045051 Unclassified 4252
236 Ga0451576_0119147 3300045051 Bacteria 2748
237 Ga0495650_0000003 3300046471 Bacteria 900730
238 Ga0495585_0000411 3300046492 Bacteria 41565
239 Ga0495585_0008330 3300046492 Bacteria 6288
240 Ga0495606_0000116 3300046507 Bacteria 134901
241 Ga0495606_0009863 3300046507 Bacteria 8009
242 Ga0495606_0092079 3300046507 Unclassified 1863
243 Ga0495610_0000005 3300046512 Bacteria 924111
244 Ga0495610_0009270 3300046512 Bacteria 6238
245 Ga0495616_0005075 3300046513 Bacteria 8187
246 Ga0495632_0059237 3300046519 Bacteria 1864
247 Ga0495648_0041790 3300046524 Bacteria 2891
248 Ga0495654_0058224 3300046530 Bacteria 1865
249 Ga0495633_0000056 3300046558 Bacteria 149334
250 Ga0495633_0006938 3300046558 Bacteria 6622
251 Ga0495625_0000159 3300046660 Bacteria 104355
252 Ga0495625_0000358 3300046660 Bacteria 69690
253 Ga0495625_0001186 3300046660 Bacteria 33408
254 Ga0495625_0003881 3300046660 Bacteria 14432
255 Ga0495625_0012181 3300046660 Bacteria 6976
256 Ga0495661_0007898 3300046665 Bacteria 7391
257 Ga0495661_0016757 3300046665 Bacteria 4847
258 Ga0495658_0013896 3300046683 Bacteria 4104
259 Ga0495669_0062798 3300046684 Unclassified 1684
260 Ga0495649_0000003 3300046694 Bacteria 880817
261 Ga0495660_0035540 3300046810 Bacteria 2783
262 Ga0495636_0000041 3300047318 Bacteria 55282
263 Ga0495683_0046790 3300047323 Bacteria 2171
264 Ga0495687_010706 3300047443 Bacteria 5004
265 Ga0495686_0000160 3300047472 Bacteria 128437
266 Ga0495686_0000249 3300047472 Bacteria 96604
267 Ga0495686_0001920 3300047472 Bacteria 20737
268 Ga0495686_0018144 3300047472 Bacteria 4728
269 Ga0496122_0031236 3300048925 Bacteria 4438
270 Ga0496123_0005756 3300048926 Bacteria 12335
271 Ga0495678_011378 3300049459 Bacteria 4263
272 Ga0501241_001351 3300049758 Bacteria 5048
273 nmdc:mga0k408_12011_c1 3300050493 Bacteria 4725
274 nmdc:mga0k408_1765_c1 3300050493 Bacteria 11597
275 nmdc:mga0k408_51_c1 3300050493 Bacteria 15009
276 Ga0500635_0000562 3300053080 Bacteria 9911
277 Ga0500608_024313 3300053122 Unclassified 2828
278 Ga0500618_000003 3300053125 Bacteria 338706
279 Ga0500618_015088 3300053125 Bacteria 1959
280 Ga0500622_0002157 3300053156 Bacteria 14602
281 Ga0530510_0021043 3300061734 Bacteria 4640

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025934 Ga0207686_10144067 Ga0207686_101440671 404
2 3300025911 Ga0207654_10068093 Ga0207654_100680931 406
3 3300005337 Ga0070682_100079403 Ga0070682_1000794031 411
4 3300005455 Ga0070663_100019294 Ga0070663_1000192943 411
5 3300025913 Ga0207695_10002377 Ga0207695_1000237711 411
6 3300026067 Ga0207678_10005366 Ga0207678_100053663 411
7 3300005459 Ga0068867_100068312 Ga0068867_1000683121 412
8 3300005719 Ga0068861_100004031 Ga0068861_1000040317 412
9 3300025961 Ga0207712_10061000 Ga0207712_100610001 412
10 3300026118 Ga0207675_100009245 Ga0207675_1000092454 412
11 3300028786 Ga0307517_10000515 Ga0307517_100005156 413
12 3300033180 Ga0307510_10002869 Ga0307510_1000286919 414
13 3300046519 Ga0495632_0059237 Ga0495632_0059237_457_1833 414
14 3300046684 Ga0495669_0062798 Ga0495669_0062798_164_1540 414
15 3300047323 Ga0495683_0046790 Ga0495683_0046790_126_1502 414
16 3300053122 Ga0500608_024313 Ga0500608_024313_605_1981 414
17 3300005459 Ga0068867_100011896 Ga0068867_1000118963 415
18 3300005548 Ga0070665_100000367 Ga0070665_10000036752 415
19 3300005563 Ga0068855_100018900 Ga0068855_1000189005 415
20 3300006237 Ga0097621_100000418 Ga0097621_10000041816 415
21 3300006358 Ga0068871_100000043 Ga0068871_10000004314 415
22 3300009093 Ga0105240_10015079 Ga0105240_100150793 415
23 3300009148 Ga0105243_10108276 Ga0105243_101082762 415
24 3300009176 Ga0105242_10103501 Ga0105242_101035011 415
25 3300013296 Ga0157374_10000575 Ga0157374_1000057514 415
26 3300013297 Ga0157378_10100842 Ga0157378_101008422 415
27 3300013306 Ga0163162_10000457 Ga0163162_1000045724 415
28 3300025907 Ga0207645_10000205 Ga0207645_1000020532 415
29 3300025913 Ga0207695_10008683 Ga0207695_100086835 415
30 3300025924 Ga0207694_10104096 Ga0207694_101040961 415
31 3300025960 Ga0207651_10024816 Ga0207651_100248162 415
32 3300026089 Ga0207648_10071267 Ga0207648_100712672 415
33 3300028379 Ga0268266_10000053 Ga0268266_10000053217 415
34 3300006881 Ga0068865_100000587 Ga0068865_1000005872 416
35 3300025938 Ga0207704_10000341 Ga0207704_100003411 416
36 3300003320 rootH2_10003875 rootH2_1000387510 417
37 3300053156 Ga0500622_0002157 Ga0500622_0002157_7698_9080 421
38 3300014325 Ga0163163_10009471 Ga0163163_100094713 422
39 3300005457 Ga0070662_100001605 Ga0070662_1000016051 423
40 3300009093 Ga0105240_10014428 Ga0105240_100144288 423
41 3300009553 Ga0105249_10070588 Ga0105249_100705883 423
42 3300013105 Ga0157369_10082913 Ga0157369_100829132 423
43 3300013296 Ga0157374_10000393 Ga0157374_1000039329 423
44 3300013307 Ga0157372_10245272 Ga0157372_102452722 423
45 3300025904 Ga0207647_10000495 Ga0207647_100004952 423
46 3300025913 Ga0207695_10004011 Ga0207695_1000401110 423
47 3300025933 Ga0207706_10000553 Ga0207706_100005531 423
48 3300037312 Ga0395899_0001241 Ga0395899_0001241_2342_3721 425
49 3300037418 Ga0395900_0000812 Ga0395900_0000812_1142_2521 425
50 3300037466 Ga0395898_0061101 Ga0395898_0061101_188_1567 425
51 3300037471 Ga0395905_0000896 Ga0395905_0000896_35905_37284 425
52 3300038443 Ga0395901_0001468 Ga0395901_0001468_21447_22826 425
53 3300046507 Ga0495606_0092079 Ga0495606_0092079_477_1790 425
54 3300005355 Ga0070671_100000925 Ga0070671_10000092518 427
55 3300013308 Ga0157375_10003673 Ga0157375_1000367314 427
56 3300025931 Ga0207644_10056780 Ga0207644_100567802 427
57 3300047443 Ga0495687_010706 Ga0495687_010706_2654_4033 427
58 3300006195 Ga0075366_10009531 Ga0075366_100095312 431
59 3300050493 nmdc:mga0k408_1765_c1 nmdc:mga0k408_1765_c1_4851_6233 442
60 3300031728 Ga0316578_10018949 Ga0316578_100189492 445
61 3300003320 rootH2_10039086 rootH2_100390862 446
62 3300025913 Ga0207695_10000142 Ga0207695_10000142177 446
63 3300002067 JGI24735J21928_10000002 JGI24735J21928_10000002323 447
64 3300002737 JGI25162J39368_1000024 JGI25162J39368_1000024154 447
65 3300003320 rootH2_10061859 rootH2_100618591 447
66 3300003323 rootH1_10002666 rootH1_1000266626 447
67 3300003323 rootH1_10031240 rootH1_1003124022 447
68 3300005327 Ga0070658_10000435 Ga0070658_1000043532 447
69 3300005336 Ga0070680_100004490 Ga0070680_1000044902 447
70 3300005339 Ga0070660_100024082 Ga0070660_1000240825 447
71 3300005366 Ga0070659_100000090 Ga0070659_1000000909 447
72 3300005458 Ga0070681_10028041 Ga0070681_100280412 447
73 3300005563 Ga0068855_100000508 Ga0068855_10000050824 447
74 3300005563 Ga0068855_100003688 Ga0068855_1000036885 447
75 3300005578 Ga0068854_100084101 Ga0068854_1000841012 447
76 3300005614 Ga0068856_100045317 Ga0068856_1000453174 447
77 3300006195 Ga0075366_10013236 Ga0075366_100132364 447
78 3300013104 Ga0157370_10080663 Ga0157370_100806631 447
79 3300017792 Ga0163161_10006396 Ga0163161_100063964 447
80 3300017792 Ga0163161_10022162 Ga0163161_100221623 447
81 3300025233 Ga0209437_100017 Ga0209437_100017151 447
82 3300025909 Ga0207705_10000043 Ga0207705_1000004332 447
83 3300025912 Ga0207707_10189994 Ga0207707_101899942 447
84 3300025913 Ga0207695_10060795 Ga0207695_100607952 447
85 3300025914 Ga0207671_10010431 Ga0207671_100104316 447
86 3300025914 Ga0207671_10021607 Ga0207671_100216072 447
87 3300025914 Ga0207671_10046256 Ga0207671_100462563 447
88 3300025917 Ga0207660_10038334 Ga0207660_100383342 447
89 3300025919 Ga0207657_10027444 Ga0207657_100274442 447
90 3300025919 Ga0207657_10078964 Ga0207657_100789643 447
91 3300025921 Ga0207652_10189372 Ga0207652_101893721 447
92 3300025932 Ga0207690_10000261 Ga0207690_1000026131 447
93 3300025949 Ga0207667_10005643 Ga0207667_100056434 447
94 3300025981 Ga0207640_10070275 Ga0207640_100702752 447
95 3300026078 Ga0207702_10080194 Ga0207702_100801943 447
96 3300031727 Ga0316576_10043193 Ga0316576_100431933 447
97 3300031728 Ga0316578_10044207 Ga0316578_100442072 447
98 3300031733 Ga0316577_10032291 Ga0316577_100322912 447
99 3300036712 Ga0316584_0026782 Ga0316584_0026782_1365_2714 447
100 iso_pu_bacteria 2929177148 2929182507 453
101 iso_pu_bacteria 2945977869 2945978432 453
102 iso_pu_bacteria 2946013367 2946015705 453
103 3300009093 Ga0105240_10059393 Ga0105240_100593933 454
104 iso_pu_bacteria 2599185184 2599478621 454
105 iso_pu_bacteria 2738541283 2738754197 454
106 iso_pu_bacteria 2842083920 2842084767 454
107 iso_pu_bacteria 2905999023 2905999259 454
108 iso_pu_bacteria 2910245624 2910246781 454
109 iso_pu_bacteria 2919437846 2919441325 454
110 iso_pu_bacteria 2928078545 2928080321 454
111 iso_pu_bacteria 2928147474 2928149504 454
112 iso_pu_bacteria 2932082852 2932083335 454
113 iso_pu_bacteria 2977232053 2977232689 454
114 3300001979 JGI24740J21852_10015309 JGI24740J21852_100153092 455
115 3300002067 JGI24735J21928_10001407 JGI24735J21928_100014071 455
116 3300005327 Ga0070658_10148287 Ga0070658_101482871 455
117 3300005455 Ga0070663_100050120 Ga0070663_1000501201 455
118 3300013100 Ga0157373_10000545 Ga0157373_100005453 455
119 3300013102 Ga0157371_10001365 Ga0157371_1000136511 455
120 3300013102 Ga0157371_10003100 Ga0157371_100031004 455
121 3300013104 Ga0157370_10030266 Ga0157370_100302664 455
122 3300013105 Ga0157369_10001277 Ga0157369_1000127721 455
123 3300013307 Ga0157372_10000087 Ga0157372_1000008735 455
124 3300013307 Ga0157372_10002387 Ga0157372_100023873 455
125 3300025261 Ga0209233_1002218 Ga0209233_10022185 455
126 3300025904 Ga0207647_10000159 Ga0207647_1000015933 455
127 3300025932 Ga0207690_10011599 Ga0207690_100115992 455
128 3300026067 Ga0207678_10020321 Ga0207678_100203213 455
129 3300037312 Ga0395899_0000204 Ga0395899_0000204_55056_56423 455
130 3300038443 Ga0395901_0120757 Ga0395901_0120757_1098_2465 455
131 3300045049 Ga0466959_0044036 Ga0466959_0044036_295_1662 455
132 3300005617 Ga0068859_100117775 Ga0068859_1001177752 456
133 3300005719 Ga0068861_100257909 Ga0068861_1002579091 456
134 3300005843 Ga0068860_100069180 Ga0068860_1000691802 456
135 3300006195 Ga0075366_10010289 Ga0075366_100102891 456
136 3300006846 Ga0075430_100152265 Ga0075430_1001522652 456
137 3300006931 Ga0097620_100117774 Ga0097620_1001177742 456
138 3300025942 Ga0207689_10084480 Ga0207689_100844803 456
139 3300028381 Ga0268264_10034408 Ga0268264_100344083 456
140 3300031507 Ga0307509_10065956 Ga0307509_100659561 456
141 3300031548 Ga0307408_100000319 Ga0307408_1000003194 456
142 3300031727 Ga0316576_10027479 Ga0316576_100274791 456
143 3300031901 Ga0307406_10000374 Ga0307406_1000037427 456
144 3300033541 Ga0316596_1007190 Ga0316596_10071901 456
145 3300035398 Ga0316574_0007305 Ga0316574_0007305_2391_3776 456
146 3300035398 Ga0316574_0141122 Ga0316574_0141122_51_1436 456
147 3300042876 Ga0451577_0000119 Ga0451577_0000119_43302_44696 456
148 3300042876 Ga0451577_0008371 Ga0451577_0008371_7046_8443 456
149 3300044673 Ga0453683_0000446 Ga0453683_0000446_40469_41866 456
150 3300044673 Ga0453683_0004432 Ga0453683_0004432_7822_9216 456
151 3300044673 Ga0453683_0012367 Ga0453683_0012367_2966_4360 456
152 3300044673 Ga0453683_0025697 Ga0453683_0025697_664_2058 456
153 3300044712 Ga0453684_0000258 Ga0453684_0000258_60819_62213 456
154 3300044712 Ga0453684_0000793 Ga0453684_0000793_19760_21208 456
155 3300044712 Ga0453684_0002217 Ga0453684_0002217_16929_18326 456
156 3300044712 Ga0453684_0003363 Ga0453684_0003363_31062_32456 456
157 3300044712 Ga0453684_0032753 Ga0453684_0032753_3673_5058 456
158 3300044712 Ga0453684_0035046 Ga0453684_0035046_1153_2556 456
159 3300044712 Ga0453684_0140629 Ga0453684_0140629_1166_2554 456
160 3300044712 Ga0453684_0190767 Ga0453684_0190767_308_1702 456
161 3300044712 Ga0453684_0347007 Ga0453684_0347007_253_1641 456
162 3300045051 Ga0451576_0022059 Ga0451576_0022059_1955_3349 456
163 3300045051 Ga0451576_0119147 Ga0451576_0119147_483_1904 456
164 3300047472 Ga0495686_0001920 Ga0495686_0001920_10202_11572 456
165 3300053080 Ga0500635_0000562 Ga0500635_0000562_6702_8078 456
166 3300061734 Ga0530510_0021043 Ga0530510_0021043_344_1735 456
167 iso_pu_bacteria 2547132374 2548497221 456
168 iso_pu_bacteria 2643221570 2643865763 456
169 iso_pu_bacteria 2643221596 2643993051 456
170 iso_pu_bacteria 2643221652 2644294360 456
171 iso_pu_bacteria 2643221717 2644647549 456
172 iso_pu_bacteria 2990710928 2990712523 456
173 3300003316 rootH1_10101316 rootH1_101013164 457
174 3300005614 Ga0068856_100003990 Ga0068856_10000399012 457
175 3300009093 Ga0105240_10000044 Ga0105240_10000044164 457
176 3300009093 Ga0105240_10000294 Ga0105240_1000029460 457
177 3300009093 Ga0105240_10411336 Ga0105240_104113361 457
178 3300009545 Ga0105237_10008392 Ga0105237_100083922 457
179 3300010375 Ga0105239_10000530 Ga0105239_1000053013 457
180 3300010375 Ga0105239_10001460 Ga0105239_1000146018 457
181 3300010375 Ga0105239_10005833 Ga0105239_1000583310 457
182 3300010375 Ga0105239_10066595 Ga0105239_100665952 457
183 3300013297 Ga0157378_10019492 Ga0157378_100194923 457
184 3300025913 Ga0207695_10000013 Ga0207695_10000013638 457
185 3300025914 Ga0207671_10002230 Ga0207671_1000223012 457
186 3300026078 Ga0207702_10000196 Ga0207702_1000019634 457
187 3300037312 Ga0395899_0000034 Ga0395899_0000034_222071_223444 457
188 3300037418 Ga0395900_0001195 Ga0395900_0001195_20931_22307 457
189 3300044658 Ga0466972_0054093 Ga0466972_0054093_469_1842 457
190 3300045049 Ga0466959_0013504 Ga0466959_0013504_1191_2564 457
191 3300045049 Ga0466959_0131726 Ga0466959_0131726_133_1506 457
192 3300046660 Ga0495625_0003881 Ga0495625_0003881_10568_11971 457
193 3300046665 Ga0495661_0007898 Ga0495661_0007898_2374_3747 457
194 3300047472 Ga0495686_0000249 Ga0495686_0000249_31183_32556 457
195 2162886007 SwRhRL2b_contig_5856 SwRhRL2b_0896.00003480 458
196 3300002772 JGI25164J39214_1001459 JGI25164J39214_10014592 458
197 3300003214 JGI25165J46597_1001051 JGI25165J46597_100105111 458
198 3300005288 Ga0065714_10002661 Ga0065714_1000266129 458
199 3300005289 Ga0065704_10070204 Ga0065704_100702043 458
200 3300005327 Ga0070658_10165377 Ga0070658_101653772 458
201 3300005539 Ga0068853_100006196 Ga0068853_1000061965 458
202 3300009093 Ga0105240_10002753 Ga0105240_1000275311 458
203 3300009093 Ga0105240_10003133 Ga0105240_100031339 458
204 3300009093 Ga0105240_10227086 Ga0105240_102270862 458
205 3300009545 Ga0105237_10003309 Ga0105237_1000330911 458
206 3300009545 Ga0105237_10006634 Ga0105237_100066343 458
207 3300009545 Ga0105237_10029038 Ga0105237_100290382 458
208 3300009551 Ga0105238_10025196 Ga0105238_100251963 458
209 3300010375 Ga0105239_10000013 Ga0105239_10000013132 458
210 3300010375 Ga0105239_10001207 Ga0105239_1000120710 458
211 3300010375 Ga0105239_10001782 Ga0105239_100017822 458
212 3300010375 Ga0105239_10004158 Ga0105239_100041584 458
213 3300010375 Ga0105239_10006888 Ga0105239_1000688812 458
214 3300010375 Ga0105239_10091218 Ga0105239_100912182 458
215 3300013100 Ga0157373_10000094 Ga0157373_1000009443 458
216 3300013100 Ga0157373_10000152 Ga0157373_1000015229 458
217 3300013100 Ga0157373_10000702 Ga0157373_1000070214 458
218 3300013100 Ga0157373_10071681 Ga0157373_100716813 458
219 3300013102 Ga0157371_10014307 Ga0157371_100143073 458
220 3300013102 Ga0157371_10145057 Ga0157371_101450572 458
221 3300013104 Ga0157370_10001434 Ga0157370_1000143412 458
222 3300013104 Ga0157370_10127864 Ga0157370_101278642 458
223 3300013105 Ga0157369_10234927 Ga0157369_102349272 458
224 3300013306 Ga0163162_10042090 Ga0163162_100420902 458
225 3300013307 Ga0157372_10024517 Ga0157372_100245173 458
226 3300014325 Ga0163163_10015148 Ga0163163_100151484 458
227 3300014497 Ga0182008_10000100 Ga0182008_1000010027 458
228 3300015261 Ga0182006_1000001 Ga0182006_1000001580 458
229 3300015261 Ga0182006_1001055 Ga0182006_100105518 458
230 3300015261 Ga0182006_1013963 Ga0182006_10139633 458
231 3300017792 Ga0163161_10001118 Ga0163161_100011186 458
232 3300017792 Ga0163161_10001475 Ga0163161_1000147515 458
233 3300025231 Ga0207427_100103 Ga0207427_10010315 458
234 3300025233 Ga0209437_100101 Ga0209437_10010136 458
235 3300025250 Ga0209026_1000301 Ga0209026_100030124 458
236 3300025250 Ga0209026_1007722 Ga0209026_10077222 458
237 3300025261 Ga0209233_1000124 Ga0209233_1000124200 458
238 3300025909 Ga0207705_10016150 Ga0207705_100161504 458
239 3300025909 Ga0207705_10136261 Ga0207705_101362612 458
240 3300025913 Ga0207695_10011050 Ga0207695_100110505 458
241 3300025913 Ga0207695_10024200 Ga0207695_100242005 458
242 3300025914 Ga0207671_10006081 Ga0207671_100060813 458
243 3300025949 Ga0207667_10000037 Ga0207667_10000037175 458
244 3300026041 Ga0207639_10039442 Ga0207639_100394422 458
245 3300026078 Ga0207702_10017491 Ga0207702_100174914 458
246 3300028794 Ga0307515_10000927 Ga0307515_100009275 458
247 3300028794 Ga0307515_10001771 Ga0307515_1000177122 458
248 3300031911 Ga0307412_10000023 Ga0307412_10000023167 458
249 3300031911 Ga0307412_10000058 Ga0307412_1000005813 458
250 3300032002 Ga0307416_100000006 Ga0307416_100000006369 458
251 3300032004 Ga0307414_10000666 Ga0307414_100006666 458
252 3300033179 Ga0307507_10000064 Ga0307507_1000006416 458
253 3300033180 Ga0307510_10002629 Ga0307510_1000262910 458
254 3300036712 Ga0316584_0058182 Ga0316584_0058182_1335_2720 458
255 3300037418 Ga0395900_0070818 Ga0395900_0070818_1206_2585 458
256 3300037471 Ga0395905_0000686 Ga0395905_0000686_34114_35493 458
257 3300038443 Ga0395901_0004519 Ga0395901_0004519_791_2170 458
258 3300039062 Ga0400483_092167 Ga0400483_092167_4461_5843 458
259 3300039062 Ga0400483_217432 Ga0400483_217432_3549_4931 458
260 3300042876 Ga0451577_0091533 Ga0451577_0091533_583_1962 458
261 3300044712 Ga0453684_0001000 Ga0453684_0001000_78220_79620 458
262 3300044712 Ga0453684_0015396 Ga0453684_0015396_11_1444 458
263 3300044712 Ga0453684_0021409 Ga0453684_0021409_4457_5836 458
264 3300044712 Ga0453684_0028366 Ga0453684_0028366_609_2006 458
265 3300044712 Ga0453684_0083407 Ga0453684_0083407_1188_2576 458
266 3300044712 Ga0453684_0203340 Ga0453684_0203340_640_2028 458
267 3300044765 Ga0466970_0031602 Ga0466970_0031602_836_2212 458
268 3300045051 Ga0451576_0005178 Ga0451576_0005178_7065_8450 458
269 3300045051 Ga0451576_0052976 Ga0451576_0052976_746_2125 458
270 3300046471 Ga0495650_0000003 Ga0495650_0000003_747019_748395 458
271 3300046492 Ga0495585_0000411 Ga0495585_0000411_36060_37436 458
272 3300046492 Ga0495585_0008330 Ga0495585_0008330_201_1577 458
273 3300046507 Ga0495606_0000116 Ga0495606_0000116_102514_103890 458
274 3300046507 Ga0495606_0009863 Ga0495606_0009863_2689_4065 458
275 3300046512 Ga0495610_0000005 Ga0495610_0000005_495311_496690 458
276 3300046512 Ga0495610_0009270 Ga0495610_0009270_3599_4975 458
277 3300046513 Ga0495616_0005075 Ga0495616_0005075_2462_3838 458
278 3300046524 Ga0495648_0041790 Ga0495648_0041790_1263_2639 458
279 3300046530 Ga0495654_0058224 Ga0495654_0058224_228_1604 458
280 3300046558 Ga0495633_0000056 Ga0495633_0000056_57127_58503 458
281 3300046558 Ga0495633_0006938 Ga0495633_0006938_1451_2827 458
282 3300046660 Ga0495625_0000159 Ga0495625_0000159_16241_17617 458
283 3300046660 Ga0495625_0000358 Ga0495625_0000358_67046_68422 458
284 3300046660 Ga0495625_0001186 Ga0495625_0001186_19392_20768 458
285 3300046660 Ga0495625_0012181 Ga0495625_0012181_3656_5032 458
286 3300046665 Ga0495661_0016757 Ga0495661_0016757_840_2216 458
287 3300046683 Ga0495658_0013896 Ga0495658_0013896_816_2192 458
288 3300046694 Ga0495649_0000003 Ga0495649_0000003_863198_864574 458
289 3300046810 Ga0495660_0035540 Ga0495660_0035540_419_1795 458
290 3300047318 Ga0495636_0000041 Ga0495636_0000041_21878_23269 458
291 3300047472 Ga0495686_0000160 Ga0495686_0000160_90538_91914 458
292 3300047472 Ga0495686_0018144 Ga0495686_0018144_2299_3675 458
293 3300048925 Ga0496122_0031236 Ga0496122_0031236_3005_4387 458
294 3300048926 Ga0496123_0005756 Ga0496123_0005756_3189_4571 458
295 3300049459 Ga0495678_011378 Ga0495678_011378_2420_3796 458
296 3300049758 Ga0501241_001351 Ga0501241_001351_1849_3225 458
297 3300050493 nmdc:mga0k408_12011_c1 nmdc:mga0k408_12011_c1_2381_3757 458
298 3300050493 nmdc:mga0k408_51_c1 nmdc:mga0k408_51_c1_2623_3999 458
299 3300053125 Ga0500618_000003 Ga0500618_000003_89804_91180 458
300 3300053125 Ga0500618_015088 Ga0500618_015088_217_1593 458

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22468

ACT_9

ACT domain

445

504

0.91

PF00696

AA_kinase

Amino acid kinase family

50

341

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ab4-assembly1.cif.gz_D crystal structure of feedback inhibition resistant mutant of aspartate kinase from corynebacterium glutamicum in complex with lysine and threonine 0.893 319 458
3ab4-assembly4.cif.gz_N crystal structure of feedback inhibition resistant mutant of aspartate kinase from corynebacterium glutamicum in complex with lysine and threonine 0.8921 319 456
2re1-assembly1.cif.gz_A crystal structure of aspartokinase alpha and beta subunits 0.8906 316 456
3ab4-assembly1.cif.gz_B crystal structure of feedback inhibition resistant mutant of aspartate kinase from corynebacterium glutamicum in complex with lysine and threonine 0.8878 319 456
3ab4-assembly2.cif.gz_F crystal structure of feedback inhibition resistant mutant of aspartate kinase from corynebacterium glutamicum in complex with lysine and threonine 0.8816 319 456
ID Description Score Start End Superfamily
af_A0A1D6K384_16_63_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9878 327 370 3.30.70.260
3ab4J01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.947 395 453 3.30.70.260
af_A0A1D6LBY0_366_425_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.937 327 383 3.30.70.260
2dtjA01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9268 395 456 3.30.70.260
3ab2N01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.925 395 458 3.30.70.260
ID Description Score Start End GO Terms
AF-A0A4Q5QI64-F1-model_v4 aspartate kinase (EC 2.7.2.4) 0.9854 83 457 GO:0004072
GO:0005829
GO:0009089
GO:0009090
AF-A0A7X8GUC5-F1-model_v4 aspartate kinase (EC 2.7.2.4) 0.9831 1 457 GO:0004072
GO:0005829
GO:0009089
GO:0009090
AF-A0A519T349-F1-model_v4 aspartate kinase (EC 2.7.2.4) 0.9798 1 294 GO:0004072
GO:0005829
GO:0009089
GO:0009090
AF-A0A7V6ZWE7-F1-model_v4 aspartate kinase (EC 2.7.2.4) 0.9795 1 457 GO:0004072
GO:0005829
GO:0009089
GO:0009090
AF-A0A7C6G768-F1-model_v4 aspartate kinase (EC 2.7.2.4) 0.9791 1 457 GO:0004072
GO:0005829
GO:0009089
GO:0009090

Feature Viewer

pLDDT pTM Quality
92.38 0.87 High
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Predicted Structure (AlphaFold2)

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