F395960

General Info

Members Datasets Scaffolds Average Seq Length
301 235 602 661

Family's Representative Sequence

Representative Sequence 3300025940|Ga0207691_10025653|Ga0207691_100256536
Length 664
Sequence MRLLGKLDWSAVPLDQPIPLIASAVAGGVVVGVLAYVWFKGWWPYLWNEWLTSVDHKRIGVMYIILAALMLLRGFADAIMMRSQQALALHGAQGYLPPEHYDQVFSAHGTIMIFFGAMPFVIPLQLGVRDVAFPTLNNTGFWLTATGALLVNISLAVGEFARTGWLPYPPLSELAYSPGVGVDYYLWALQISGVGTLTTGINLVTTILKMRAPGMSYLRMPMFCWTSLASNLLIVAAFPILTATLAMLTLDRYMGFHFFTNEAGGNPMMFVNLIWAWGHPEVYILILPAFGIFSEVFSTFSAKPLFGYRSMVMATLFICVVSFLVWLHHFFTMGAGGDVNAAFGIATSIIAVGTGVKIYNWLFTMYGGRVRFEVPMLWALGFVITFVIGGMTGVLLAVPPADFVLHNSMFLVAHFHNVIIGGVLFGAFAGYEYWFPKAFGFRLHKGWGVTAFWLTLTGFIATFMPLYIVGMEGMTRRLQHIDNPLWDPWILMAGGGTVVIFLGVAAQIVQLVVSIRMREQLRDLTGDPWNGRTLEWVTPSPPPTFNFPVLHDVHGEDAYWGMKQAAIAQERLYEEPDYKPIEMPKNNATGFVCGFFATIMGFSLIWHIWWLVILGFIGAYATFVLFAWRDEDEYEIPAEEVARIDRARRASRGPEWLAAMESQA

Samples

Sample ID Description Type Environment
1 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
3 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
4 3300003574 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_26 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
5 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
6 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
7 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
8 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
9 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
10 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
11 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
37 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
50 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
51 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
54 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
55 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
56 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
58 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
59 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
65 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
67 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
70 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
98 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
99 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
100 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
101 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
102 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
103 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
104 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
105 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
106 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
107 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
113 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
114 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
115 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
116 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
117 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
118 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
119 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
120 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
121 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
122 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
123 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
124 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
125 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
126 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
127 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
128 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
129 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
130 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
131 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
132 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
133 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
134 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
135 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
136 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
137 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
138 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
139 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
140 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
141 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
142 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
143 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
144 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
145 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
146 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
147 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
148 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
149 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
150 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
151 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
152 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
153 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
154 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
155 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
156 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
157 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
158 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
159 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
160 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
161 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
162 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
163 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
164 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
165 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
166 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
169 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
170 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
171 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
172 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
175 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
176 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
177 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
178 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
179 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
180 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
181 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
182 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
183 2512875024
184 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
185 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
186 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
187 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
188 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
189 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
190 2593339238 Luteibacter sp. UNCMF366Tsu5.1 Isolate Unclassified
191 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
192 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
193 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
194 2643221585 Pelomonas sp. Root662 Isolate Unclassified
195 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
196 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
197 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
198 2643221638 Duganella sp. Root336D2 Isolate Unclassified
199 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
200 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
201 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
202 2643221656 Pelomonas sp. Root405 Isolate Unclassified
203 2643221683 Variovorax sp. Root473 Isolate Unclassified
204 2738541277 Variovorax sp. GV051 Isolate Unclassified
205 2738543019 Variovorax sp. GV040 Isolate Unclassified
206 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
207 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
208 2842677519 Variovorax sp. R-72495 Isolate Unclassified
209 2842711865 Duganella sp. R-73148 Isolate Unclassified
210 2842733646 Variovorax sp. R-72446 Isolate Unclassified
211 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
212 2857553236 Duganella sp. R-74557 Isolate Unclassified
213 2857558681 Duganella sp. R-74565 Isolate Unclassified
214 2857564685 Duganella sp. R-74599 Isolate Unclassified
215 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
216 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
217 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
218 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
219 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
220 2904424332 Duganella sp. 1411 Isolate Rhizosphere
221 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
222 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
223 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
224 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
225 2935926038 Bradyrhizobium sp. F1.2.1 Isolate Nodule
226 2935934488 Bradyrhizobium sp. F1.2.2 Isolate Nodule
227 2935942939 Bradyrhizobium sp. F1.2.6 Isolate Nodule
228 2935951376 Bradyrhizobium sp. F1.2.8 Isolate Nodule
229 2935967501 Bradyrhizobium sp. F1.6.2 Isolate Nodule
230 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
231 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
232 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
233 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule
234 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
235 8019687851 Bradyrhizobium sp. F1.13.4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 81.06
Metatranscriptomes 0.66
Isolates 18.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.94
Nodule 4.98
Rhizoplane 1.99
Rhizosphere 58.14
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207691_10025653 3300025940 Bacteria 5531
2 JGI25154J39366_1001873 3300002738 Bacteria 6401
3 JGI25157J39369_1000623 3300002741 Bacteria 20017
4 Ga0007410J51695_1014726 3300003574 Bacteria 4447
5 Ga0007409J51694_1008758 3300003575 Bacteria 3822
6 Ga0055532_1000102 3300003758 Bacteria 91562
7 Ga0055535_1003225 3300003761 Bacteria 4798
8 Ga0055526_1000001 3300003771 Bacteria 669703
9 Ga0055526_1003976 3300003771 Bacteria 9107
10 Ga0055534_1001141 3300003784 Bacteria 11259
11 Ga0055534_1002008 3300003784 Bacteria 7403
12 Ga0055534_1008638 3300003784 Bacteria 2289
13 Ga0055528_1009580 3300003790 Bacteria 4031
14 Ga0055530_10003264 3300003791 Bacteria 9434
15 Ga0055530_10008869 3300003791 Bacteria 3958
16 Ga0065165_1000836 3300005262 Bacteria 40452
17 Ga0070670_100085383 3300005331 Bacteria 2712
18 Ga0070680_100003253 3300005336 Bacteria 12095
19 Ga0070660_100000528 3300005339 Bacteria 25477
20 Ga0070669_100011939 3300005353 Bacteria 6163
21 Ga0070669_100088218 3300005353 Bacteria 2321
22 Ga0070671_100005832 3300005355 Bacteria 9810
23 Ga0070673_100032052 3300005364 Bacteria 3952
24 Ga0070659_100046627 3300005366 Bacteria 3397
25 Ga0070703_10001229 3300005406 Bacteria 7815
26 Ga0070713_100083969 3300005436 Bacteria 2724
27 Ga0070701_10008110 3300005438 Bacteria 4524
28 Ga0070711_100000034 3300005439 Bacteria 95912
29 Ga0070705_100000470 3300005440 Bacteria 23186
30 Ga0070708_100026512 3300005445 Bacteria 4962
31 Ga0068867_100000004 3300005459 Bacteria 180739
32 Ga0070699_100002378 3300005518 Bacteria 16873
33 Ga0070697_100062540 3300005536 Bacteria 3038
34 Ga0070672_100035238 3300005543 Bacteria 3803
35 Ga0070672_100076497 3300005543 Bacteria 2674
36 Ga0070695_100043691 3300005545 Bacteria 2850
37 Ga0070696_100034733 3300005546 Bacteria 3470
38 Ga0068857_100011890 3300005577 Bacteria 7572
39 Ga0068859_100004567 3300005617 Bacteria 14118
40 Ga0068864_100030106 3300005618 Bacteria 4601
41 Ga0068860_100000071 3300005843 Bacteria 178413
42 Ga0068860_100001535 3300005843 Bacteria 24870
43 Ga0075365_10017620 3300006038 Bacteria 4375
44 Ga0075370_10005660 3300006353 Bacteria 6236
45 Ga0075434_100025091 3300006871 Bacteria 5831
46 Ga0097620_100004567 3300006931 Bacteria 14118
47 Ga0105244_10003165 3300009036 Bacteria 11955
48 Ga0105240_10047168 3300009093 Bacteria 5453
49 Ga0111539_10012498 3300009094 Bacteria 10640
50 Ga0111539_10048435 3300009094 Bacteria 5074
51 Ga0105243_10052863 3300009148 Bacteria 3219
52 Ga0105238_10043372 3300009551 Bacteria 4551
53 Ga0105249_10001291 3300009553 Bacteria 21972
54 Ga0157377_10000010 3300014745 Bacteria 380929
55 Ga0157379_10078155 3300014968 Bacteria 2963
56 Ga0157376_10004872 3300014969 Bacteria 9358
57 Ga0213872_10000057 3300021361 Bacteria 100906
58 Ga0213872_10000871 3300021361 Bacteria 21851
59 Ga0213872_10008547 3300021361 Bacteria 4952
60 Ga0209435_100030 3300025206 Bacteria 170822
61 Ga0209435_100134 3300025206 Bacteria 25335
62 Ga0209147_100159 3300025229 Bacteria 91615
63 Ga0209258_100259 3300025242 Bacteria 92050
64 Ga0207425_1000001 3300025245 Bacteria 2525432
65 Ga0207425_1000249 3300025245 Bacteria 41006
66 Ga0209646_1000023 3300025246 Bacteria 441100
67 Ga0209646_1000057 3300025246 Bacteria 266384
68 Ga0209646_1000100 3300025246 Bacteria 170822
69 Ga0209026_1000091 3300025250 Bacteria 171170
70 Ga0209148_1000114 3300025254 Bacteria 192073
71 Ga0209148_1004450 3300025254 Bacteria 3453
72 Ga0209759_1000084 3300025256 Bacteria 169233
73 Ga0209759_1000141 3300025256 Bacteria 124528
74 Ga0209129_1000001 3300025258 Bacteria 1452436
75 Ga0209565_1000103 3300025263 Bacteria 127199
76 Ga0209565_1000571 3300025263 Bacteria 25126
77 Ga0209673_1004973 3300025273 Bacteria 6892
78 Ga0209130_1010858 3300025284 Bacteria 2478
79 Ga0209675_1000479 3300025291 Bacteria 30333
80 Ga0209675_1001467 3300025291 Bacteria 13553
81 Ga0209675_1006806 3300025291 Bacteria 4508
82 Ga0209675_1011662 3300025291 Bacteria 2898
83 Ga0209676_1000066 3300025292 Bacteria 317897
84 Ga0209676_1000196 3300025292 Bacteria 135726
85 Ga0209676_1002212 3300025292 Bacteria 14505
86 Ga0209025_1000769 3300025294 Bacteria 53174
87 Ga0209025_1001052 3300025294 Bacteria 40294
88 Ga0209025_1001357 3300025294 Bacteria 32874
89 Ga0209564_1000002 3300025295 Bacteria 1636803
90 Ga0209564_1000743 3300025295 Bacteria 46196
91 Ga0209564_1005329 3300025295 Bacteria 7403
92 Ga0209564_1016376 3300025295 Bacteria 2955
93 Ga0209758_1000116 3300025297 Bacteria 198356
94 Ga0209050_1000736 3300025298 Bacteria 47556
95 Ga0209050_1006522 3300025298 Bacteria 6878
96 Ga0209050_1008975 3300025298 Bacteria 5213
97 Ga0209256_1001951 3300025299 Bacteria 18696
98 Ga0209256_1007308 3300025299 Bacteria 5498
99 Ga0207426_1004415 3300025302 Bacteria 6877
100 Ga0209051_1027701 3300025303 Bacteria 2252
101 Ga0209257_1000065 3300025304 Bacteria 353604
102 Ga0209257_1000180 3300025304 Bacteria 158090
103 Ga0209257_1000293 3300025304 Bacteria 110422
104 Ga0209257_1000737 3300025304 Bacteria 49659
105 Ga0207655_1003178 3300025728 Bacteria 12400
106 Ga0207655_1017375 3300025728 Bacteria 3882
107 Ga0207647_10016659 3300025904 Bacteria 5011
108 Ga0207705_10001077 3300025909 Bacteria 22145
109 Ga0207705_10007639 3300025909 Bacteria 7952
110 Ga0207654_10008671 3300025911 Bacteria 5153
111 Ga0207695_10101518 3300025913 Bacteria 2870
112 Ga0207663_10000002 3300025916 Bacteria 534155
113 Ga0207657_10001160 3300025919 Bacteria 28040
114 Ga0207649_10004570 3300025920 Bacteria 7508
115 Ga0207681_10005851 3300025923 Bacteria 7538
116 Ga0207644_10042273 3300025931 Bacteria 3229
117 Ga0207690_10005199 3300025932 Bacteria 7673
118 Ga0207690_10006363 3300025932 Bacteria 6998
119 Ga0207709_10001077 3300025935 Bacteria 20081
120 Ga0207691_10111539 3300025940 Bacteria 2432
121 Ga0207679_10009005 3300025945 Bacteria 6380
122 Ga0207651_10015272 3300025960 Bacteria 4458
123 Ga0207651_10022952 3300025960 Bacteria 3828
124 Ga0207712_10030510 3300025961 Bacteria 3625
125 Ga0207678_10013363 3300026067 Bacteria 7205
126 Ga0207678_10049848 3300026067 Bacteria 3618
127 Ga0207708_10002202 3300026075 Bacteria 14398
128 Ga0207641_10000872 3300026088 Bacteria 31574
129 Ga0207648_10000002 3300026089 Bacteria 307909
130 Ga0207674_10006100 3300026116 Bacteria 14247
131 Ga0207698_10006225 3300026142 Bacteria 7429
132 Ga0207428_10047051 3300027907 Bacteria 3465
133 Ga0268266_10000234 3300028379 Bacteria 94817
134 Ga0268265_10002007 3300028380 Bacteria 16031
135 Ga0268264_10000073 3300028381 Bacteria 260615
136 Ga0268264_10000100 3300028381 Bacteria 227852
137 Ga0268264_10009253 3300028381 Bacteria 8156
138 Ga0265336_10000008 3300028666 Bacteria 336082
139 Ga0265338_10095908 3300028800 Bacteria 2435
140 Ga0265324_10007184 3300029957 Bacteria 4547
141 Ga0307408_100000030 3300031548 Bacteria 223389
142 Ga0307408_100001280 3300031548 Bacteria 18860
143 Ga0307408_100006936 3300031548 Bacteria 7498
144 Ga0307514_10016003 3300031649 Bacteria 6178
145 Ga0307514_10017254 3300031649 Bacteria 5944
146 Ga0307516_10001568 3300031730 Bacteria 31474
147 Ga0307516_10003207 3300031730 Bacteria 21235
148 Ga0307406_10033063 3300031901 Bacteria 3162
149 Ga0373939_0000071 3300035114 Bacteria 32243
150 Ga0373960_0000615 3300035121 Bacteria 7289
151 Ga0373931_0000591 3300035691 Bacteria 14952
152 Ga0373947_0030796 3300035725 Bacteria 3154
153 Ga0395899_0000086 3300037312 Bacteria 157725
154 Ga0395900_0000584 3300037418 Bacteria 50170
155 Ga0395900_0038772 3300037418 Bacteria 4911
156 Ga0395898_0004694 3300037466 Bacteria 14873
157 Ga0395905_0000033 3300037471 Bacteria 279363
158 Ga0395905_0000221 3300037471 Bacteria 87203
159 Ga0395905_0014924 3300037471 Bacteria 7410
160 Ga0395905_0053525 3300037471 Bacteria 3777
161 Ga0395905_0066848 3300037471 Bacteria 3366
162 Ga0436361_0254808 3300039447 Bacteria 14252
163 Ga0439466_0009070 3300041411 Bacteria 3733
164 Ga0439465_0001406 3300041413 Bacteria 7785
165 Ga0439449_0000776 3300042007 Bacteria 12298
166 Ga0450893_0002129 3300042532 Bacteria 3085
167 Ga0466969_0000007 3300044656 Bacteria 152114
168 Ga0466965_0017706 3300044683 Bacteria 3408
169 Ga0466965_0031158 3300044683 Bacteria 2600
170 Ga0466966_0008799 3300044684 Bacteria 6684
171 Ga0466961_0004178 3300044693 Bacteria 9020
172 Ga0466961_0014766 3300044693 Bacteria 5017
173 Ga0466963_0004866 3300044694 Bacteria 7824
174 Ga0466964_0000033 3300044706 Bacteria 28596
175 Ga0466971_0021677 3300044719 Bacteria 2859
176 Ga0466957_0016343 3300044842 Bacteria 4340
177 Ga0466960_0006607 3300044901 Bacteria 4661
178 Ga0466959_0000301 3300045049 Bacteria 29334
179 Ga0466959_0001084 3300045049 Bacteria 16284
180 Ga0466958_0009636 3300045836 Bacteria 5387
181 Ga0466958_0061683 3300045836 Bacteria 2284
182 Ga0466967_0040746 3300045976 Bacteria 4000
183 Ga0495590_0000034 3300046457 Bacteria 129910
184 Ga0495638_0000072 3300046460 Bacteria 164926
185 Ga0495650_0000687 3300046471 Bacteria 43702
186 Ga0495580_0041814 3300046472 Bacteria 3267
187 Ga0495580_0067388 3300046472 Bacteria 2504
188 Ga0495605_0000107 3300046474 Bacteria 105085
189 Ga0495584_0000002 3300046491 Bacteria 512179
190 Ga0495585_0000003 3300046492 Bacteria 406344
191 Ga0495585_0014710 3300046492 Bacteria 4552
192 Ga0495585_0030270 3300046492 Bacteria 3079
193 Ga0495583_0000496 3300046506 Bacteria 57163
194 Ga0495616_0013463 3300046513 Bacteria 4613
195 Ga0495643_0042301 3300046522 Bacteria 2482
196 Ga0495644_0010279 3300046523 Bacteria 3605
197 Ga0495648_0000037 3300046524 Bacteria 195401
198 Ga0495648_0008531 3300046524 Bacteria 8052
199 Ga0495665_0005867 3300046531 Bacteria 6621
200 Ga0495609_0010707 3300046538 Bacteria 4388
201 Ga0495645_0003664 3300046543 Bacteria 10439
202 Ga0495622_0000002 3300046557 Bacteria 321742
203 Ga0495622_0026995 3300046557 Bacteria 2679
204 Ga0495633_0000121 3300046558 Bacteria 105197
205 Ga0495633_0005001 3300046558 Bacteria 8269
206 Ga0495588_0024599 3300046674 Bacteria 2992
207 Ga0495623_0016435 3300046679 Bacteria 4779
208 Ga0495613_0059080 3300046689 Bacteria 2812
209 Ga0495604_0013465 3300047317 Bacteria 6516
210 Ga0495672_0000030 3300047320 Bacteria 305021
211 Ga0495683_0000007 3300047323 Bacteria 268546
212 Ga0495677_0002032 3300047445 Bacteria 8077
213 Ga0495673_0000136 3300047469 Bacteria 134839
214 Ga0495686_0000344 3300047472 Bacteria 76585
215 Ga0496102_0003137 3300048905 Bacteria 14019
216 Ga0496103_0008995 3300048906 Bacteria 5918
217 Ga0496103_0009377 3300048906 Bacteria 5797
218 Ga0496106_0047910 3300048909 Bacteria 3218
219 Ga0496115_0019396 3300048918 Bacteria 5232
220 Ga0496117_0006172 3300048920 Bacteria 12244
221 Ga0496118_0000889 3300048921 Bacteria 46956
222 Ga0496118_0020638 3300048921 Bacteria 5836
223 Ga0496121_0003637 3300048924 Bacteria 21705
224 Ga0496122_0000748 3300048925 Bacteria 63291
225 Ga0496122_0012500 3300048925 Bacteria 8441
226 Ga0496123_0001196 3300048926 Bacteria 38152
227 Ga0496123_0004569 3300048926 Bacteria 14433
228 Ga0496126_0000240 3300048929 Bacteria 117890
229 Ga0495678_017441 3300049459 Bacteria 3254
230 Ga0501034_0000588 3300049571 Bacteria 57446
231 Ga0501043_0001256 3300049579 Bacteria 22358
232 Ga0501198_000025 3300049649 Bacteria 66985
233 Ga0501209_001727 3300049656 Bacteria 3172
234 Ga0501222_000033 3300049662 Bacteria 55105
235 Ga0501225_0004610 3300049705 Bacteria 4100
236 nmdc:mga07m45_1577_c1 3300050496 Bacteria 10502
237 nmdc:mga08y16_11593_c1 3300050511 Bacteria 9263
238 nmdc:mga0n895_23049_c1 3300050512 Bacteria 5847
239 Ga0495601_0036322 3300053077 Bacteria 3076
240 Ga0495612_0016497 3300053078 Bacteria 2959
241 Ga0500618_000476 3300053125 Bacteria 25891
242 Ga0500559_0000195 3300053136 Bacteria 48743
243 Ga0500622_0000043 3300053156 Bacteria 161080
244 Ga0466962_0002603 3300061719 Bacteria 8573
245 Ga0466962_0021350 3300061719 Bacteria 3109
246 Ga0466962_0028705 3300061719 Bacteria 2664
247 2509153909 2508501128 Bacteria 8613869
248 2511249049 2511231003 Bacteria 5606035
249 2512963725 2512875024 Bacteria 7195110
250 2513953015 2513237150 Bacteria 6553639
251 2514039745 2513237164 Bacteria 7563725
252 2514043882 2513237165 Bacteria 6771773
253 2550696011 2548876994 Bacteria 4904866
254 2587727013 2585428057 Bacteria 6737412
255 2587732047 2585428058 Bacteria 6853932
256 2595448797 2593339238 Bacteria 4182970
257 2600204155 2599185354 Bacteria 4398675
258 2643745647 2643221544 Bacteria 5886209
259 2643787203 2643221554 Bacteria 6603920
260 2643936715 2643221585 Bacteria 5812563
261 2643970569 2643221592 Bacteria 6608788
262 2644139150 2643221625 Bacteria 6512927
263 2644161935 2643221628 Bacteria 5745828
264 2644215720 2643221638 Bacteria 6579467
265 2644245208 2643221644 Bacteria 6865017
266 2644257704 2643221646 Bacteria 6433402
267 2644274760 2643221648 Bacteria 6521465
268 2644318614 2643221656 Bacteria 5809961
269 2644467130 2643221683 Bacteria 5749203
270 2738718305 2738541277 Bacteria 7458140
271 2739281492 2738543019 Bacteria 7459457
272 2753767082 2751185897 Bacteria 5322941
273 2819593510 2818991445 Bacteria 4955017
274 2842677625 2842677519 Bacteria 5615038
275 2842712406 2842711865 Bacteria 7155354
276 2842734941 2842733646 Bacteria 5716726
277 2848297691 2848297114 Bacteria 3608511
278 2857555163 2857553236 Bacteria 6166726
279 2857562804 2857558681 Bacteria 6617694
280 2857569942 2857564685 Bacteria 6290584
281 2884816512 2884811622 Bacteria 5552861
282 2884837739 2884836552 Bacteria 5219991
283 2884854031 2884852848 Bacteria 5221161
284 2894653583 2894652903 Bacteria 4587256
285 2896154852 2896154374 Bacteria 5221518
286 2904424984 2904424332 Bacteria 7633521
287 2904545014 2904541872 Bacteria 8915136
288 2919467103 2919462493 Bacteria 5817112
289 2929165187 2929160207 Bacteria 9075316
290 2935924284 2935916978 Bacteria 9113783
291 2935933103 2935926038 Bacteria 8601059
292 2935941580 2935934488 Bacteria 8602579
293 2935950058 2935942939 Bacteria 8599779
294 2935958574 2935951376 Bacteria 8602333
295 2935974643 2935967501 Bacteria 8603075
296 2945910200 2945909444 Bacteria 7065066
297 2945946215 2945945610 Bacteria 5951079
298 2945975818 2945972063 Bacteria 6086495
299 644747371 644736347 Bacteria 6476522
300 8003014249 8003014200 Bacteria 4059994
301 8019691810 8019687851 Bacteria 8712826
302 Ga0207691_10025653
303 JGI25154J39366_1001873
304 JGI25157J39369_1000623
305 Ga0007410J51695_1014726
306 Ga0007409J51694_1008758
307 Ga0055532_1000102
308 Ga0055535_1003225
309 Ga0055526_1000001
310 Ga0055526_1003976
311 Ga0055534_1001141
312 Ga0055534_1002008
313 Ga0055534_1008638
314 Ga0055528_1009580
315 Ga0055530_10003264
316 Ga0055530_10008869
317 Ga0065165_1000836
318 Ga0070670_100085383
319 Ga0070680_100003253
320 Ga0070660_100000528
321 Ga0070669_100011939
322 Ga0070669_100088218
323 Ga0070671_100005832
324 Ga0070673_100032052
325 Ga0070659_100046627
326 Ga0070703_10001229
327 Ga0070713_100083969
328 Ga0070701_10008110
329 Ga0070711_100000034
330 Ga0070705_100000470
331 Ga0070708_100026512
332 Ga0068867_100000004
333 Ga0070699_100002378
334 Ga0070697_100062540
335 Ga0070672_100035238
336 Ga0070672_100076497
337 Ga0070695_100043691
338 Ga0070696_100034733
339 Ga0068857_100011890
340 Ga0068859_100004567
341 Ga0068864_100030106
342 Ga0068860_100000071
343 Ga0068860_100001535
344 Ga0075365_10017620
345 Ga0075370_10005660
346 Ga0075434_100025091
347 Ga0097620_100004567
348 Ga0105244_10003165
349 Ga0105240_10047168
350 Ga0111539_10012498
351 Ga0111539_10048435
352 Ga0105243_10052863
353 Ga0105238_10043372
354 Ga0105249_10001291
355 Ga0157377_10000010
356 Ga0157379_10078155
357 Ga0157376_10004872
358 Ga0213872_10000057
359 Ga0213872_10000871
360 Ga0213872_10008547
361 Ga0209435_100030
362 Ga0209435_100134
363 Ga0209147_100159
364 Ga0209258_100259
365 Ga0207425_1000001
366 Ga0207425_1000249
367 Ga0209646_1000023
368 Ga0209646_1000057
369 Ga0209646_1000100
370 Ga0209026_1000091
371 Ga0209148_1000114
372 Ga0209148_1004450
373 Ga0209759_1000084
374 Ga0209759_1000141
375 Ga0209129_1000001
376 Ga0209565_1000103
377 Ga0209565_1000571
378 Ga0209673_1004973
379 Ga0209130_1010858
380 Ga0209675_1000479
381 Ga0209675_1001467
382 Ga0209675_1006806
383 Ga0209675_1011662
384 Ga0209676_1000066
385 Ga0209676_1000196
386 Ga0209676_1002212
387 Ga0209025_1000769
388 Ga0209025_1001052
389 Ga0209025_1001357
390 Ga0209564_1000002
391 Ga0209564_1000743
392 Ga0209564_1005329
393 Ga0209564_1016376
394 Ga0209758_1000116
395 Ga0209050_1000736
396 Ga0209050_1006522
397 Ga0209050_1008975
398 Ga0209256_1001951
399 Ga0209256_1007308
400 Ga0207426_1004415
401 Ga0209051_1027701
402 Ga0209257_1000065
403 Ga0209257_1000180
404 Ga0209257_1000293
405 Ga0209257_1000737
406 Ga0207655_1003178
407 Ga0207655_1017375
408 Ga0207647_10016659
409 Ga0207705_10001077
410 Ga0207705_10007639
411 Ga0207654_10008671
412 Ga0207695_10101518
413 Ga0207663_10000002
414 Ga0207657_10001160
415 Ga0207649_10004570
416 Ga0207681_10005851
417 Ga0207644_10042273
418 Ga0207690_10005199
419 Ga0207690_10006363
420 Ga0207709_10001077
421 Ga0207691_10111539
422 Ga0207679_10009005
423 Ga0207651_10015272
424 Ga0207651_10022952
425 Ga0207712_10030510
426 Ga0207678_10013363
427 Ga0207678_10049848
428 Ga0207708_10002202
429 Ga0207641_10000872
430 Ga0207648_10000002
431 Ga0207674_10006100
432 Ga0207698_10006225
433 Ga0207428_10047051
434 Ga0268266_10000234
435 Ga0268265_10002007
436 Ga0268264_10000073
437 Ga0268264_10000100
438 Ga0268264_10009253
439 Ga0265336_10000008
440 Ga0265338_10095908
441 Ga0265324_10007184
442 Ga0307408_100000030
443 Ga0307408_100001280
444 Ga0307408_100006936
445 Ga0307514_10016003
446 Ga0307514_10017254
447 Ga0307516_10001568
448 Ga0307516_10003207
449 Ga0307406_10033063
450 Ga0373939_0000071
451 Ga0373960_0000615
452 Ga0373931_0000591
453 Ga0373947_0030796
454 Ga0395899_0000086
455 Ga0395900_0000584
456 Ga0395900_0038772
457 Ga0395898_0004694
458 Ga0395905_0000033
459 Ga0395905_0000221
460 Ga0395905_0014924
461 Ga0395905_0053525
462 Ga0395905_0066848
463 Ga0436361_0254808
464 Ga0439466_0009070
465 Ga0439465_0001406
466 Ga0439449_0000776
467 Ga0450893_0002129
468 Ga0466969_0000007
469 Ga0466965_0017706
470 Ga0466965_0031158
471 Ga0466966_0008799
472 Ga0466961_0004178
473 Ga0466961_0014766
474 Ga0466963_0004866
475 Ga0466964_0000033
476 Ga0466971_0021677
477 Ga0466957_0016343
478 Ga0466960_0006607
479 Ga0466959_0000301
480 Ga0466959_0001084
481 Ga0466958_0009636
482 Ga0466958_0061683
483 Ga0466967_0040746
484 Ga0495590_0000034
485 Ga0495638_0000072
486 Ga0495650_0000687
487 Ga0495580_0041814
488 Ga0495580_0067388
489 Ga0495605_0000107
490 Ga0495584_0000002
491 Ga0495585_0000003
492 Ga0495585_0014710
493 Ga0495585_0030270
494 Ga0495583_0000496
495 Ga0495616_0013463
496 Ga0495643_0042301
497 Ga0495644_0010279
498 Ga0495648_0000037
499 Ga0495648_0008531
500 Ga0495665_0005867
501 Ga0495609_0010707
502 Ga0495645_0003664
503 Ga0495622_0000002
504 Ga0495622_0026995
505 Ga0495633_0000121
506 Ga0495633_0005001
507 Ga0495588_0024599
508 Ga0495623_0016435
509 Ga0495613_0059080
510 Ga0495604_0013465
511 Ga0495672_0000030
512 Ga0495683_0000007
513 Ga0495677_0002032
514 Ga0495673_0000136
515 Ga0495686_0000344
516 Ga0496102_0003137
517 Ga0496103_0008995
518 Ga0496103_0009377
519 Ga0496106_0047910
520 Ga0496115_0019396
521 Ga0496117_0006172
522 Ga0496118_0000889
523 Ga0496118_0020638
524 Ga0496121_0003637
525 Ga0496122_0000748
526 Ga0496122_0012500
527 Ga0496123_0001196
528 Ga0496123_0004569
529 Ga0496126_0000240
530 Ga0495678_017441
531 Ga0501034_0000588
532 Ga0501043_0001256
533 Ga0501198_000025
534 Ga0501209_001727
535 Ga0501222_000033
536 Ga0501225_0004610
537 nmdc:mga07m45_1577_c1
538 nmdc:mga08y16_11593_c1
539 nmdc:mga0n895_23049_c1
540 Ga0495601_0036322
541 Ga0495612_0016497
542 Ga0500618_000476
543 Ga0500559_0000195
544 Ga0500622_0000043
545 Ga0466962_0002603
546 Ga0466962_0021350
547 Ga0466962_0028705
548 2509153909
549 2511249049
550 2512963725
551 2513953015
552 2514039745
553 2514043882
554 2550696011
555 2587727013
556 2587732047
557 2595448797
558 2600204155
559 2643745647
560 2643787203
561 2643936715
562 2643970569
563 2644139150
564 2644161935
565 2644215720
566 2644245208
567 2644257704
568 2644274760
569 2644318614
570 2644467130
571 2738718305
572 2739281492
573 2753767082
574 2819593510
575 2842677625
576 2842712406
577 2842734941
578 2848297691
579 2857555163
580 2857562804
581 2857569942
582 2884816512
583 2884837739
584 2884854031
585 2894653583
586 2896154852
587 2904424984
588 2904545014
589 2919467103
590 2929165187
591 2935924284
592 2935933103
593 2935941580
594 2935950058
595 2935958574
596 2935974643
597 2945910200
598 2945946215
599 2945975818
600 644747371
601 8003014249
602 8019691810

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00115

COX1

Cytochrome C and Quinol oxidase polypeptide I

58

499

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8f68-assembly1.cif.gz_A e. coli cytochrome bo3 ubiquinol oxidase monomer 0.9729 12 664
8f68-assembly1.cif.gz_A e. coli cytochrome bo3 ubiquinol oxidase monomer 0.9641 12 664
7qhm-assembly1.cif.gz_Q cytochrome bcc-aa3 supercomplex (respiratory supercomplex iii2/iv2) from corynebacterium glutamicum (stigmatellin and azide bound) 0.9393 63 578
3oma-assembly2.cif.gz_C catalytic core subunits (i and ii) of cytochrome c oxidase from rhodobacter sphaeroides with k362m mutation 0.9367 59 557
3abk-assembly1.cif.gz_A bovine heart cytochrome c oxidase at the no-bound fully reduced state (50k) 0.9365 58 565
ID Description Score Start End Superfamily
af_Q2FZK0_30_556_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9391 43 563 1.20.210.10
2yevD01 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9319 52 575 1.20.210.10
2yevD01 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9284 52 575 1.20.210.10
af_Q2FZK0_30_556_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.927 43 563 1.20.210.10
af_P9WP71_20_544_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9268 60 572 1.20.210.10
ID Description Score Start End GO Terms
AF-A0A379WEL2-F1-model_v4 Cytochrome bo(3) ubiquinol oxidase subunit 1 (EC 7.1.1.3) (Cytochrome o ubiquinol oxidase subunit 1) (Oxidase bo(3) subunit 1) (Ubiquinol oxidase polypeptide I) (Ubiquinol oxidase subunit 1) 0.969 72 663 GO:0004129
GO:0005886
GO:0009060
GO:0009486
GO:0015990
GO:0016682
GO:0020037
GO:0022904
AF-A0A172UXP0-F1-model_v4 Cytochrome c oxidase subunit 1 (EC 7.1.1.9) 0.9668 389 530 GO:0004129
GO:0005743
GO:0006123
GO:0015990
GO:0020037
GO:0046872
AF-A0A359KEF2-F1-model_v4 Cytochrome o ubiquinol oxidase subunit I 0.9617 51 289 GO:0004129
GO:0005886
GO:0009060
GO:0009486
GO:0015990
GO:0020037
GO:0022904
AF-W7W9S8-F1-model_v4 Ubiquinol oxidase subunit 1 (EC 1.10.3.-) 0.9599 89 327 GO:0004129
GO:0005886
GO:0009060
GO:0009486
GO:0015990
GO:0020037
GO:0022904
AF-A0A4Q5QFH7-F1-model_v4 Cytochrome o ubiquinol oxidase subunit I 0.9548 121 505 GO:0004129
GO:0005886
GO:0009060
GO:0009486
GO:0015990
GO:0020037
GO:0022904

Map