F396458

General Info

Members Datasets Scaffolds Average Seq Length
302 186 604 661

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10044757|Ga0114129_100447573
Length 704
Sequence MHFDSKDLTHDQLVHFYKSLLLPRMIEEKMLVLLRQGKISKWFSGIGQEAIATGVTLALEEDEWILPLHRNLGVFTARHMPLHKLLMQWQGGIGGYSKGRERSFHFGNANHHICGMISHLGPQLGIADGIALANKLRKENKVVVVFTGEGGTSEGDFHEALNLAAVWELPVIFVVENNGYALSTPVNEQYRCEALVERARGYGIDGVKIDGNNLLGVYDTIQGVRQYCIEYQKPYLVECATFRMRGHEEASGTKYIPSWLFEIWEVKDPIKNFEQFLMSKQVLTKELVETIRQDLKEYIDVELSIGFNGKPIVVDTEKELLDVYAKAEVGSRIPKANGTEVRSQKSEVGSMMAEAVLVEVEDSIDVADLGPQSSNLKHLSDESSTERRFIDAIKAGLHQSMNEHPDLILMGQDIAEYGGVFKITEGFVEEFGKDRVRNTPLCESAVIGASLGLSLMGIKSVIEMQFADFVTMGFNQIVNNLAKIHYRWGQSASVVIRMPTGAGVGAGPFHSQSNEAWFVHTPGLKVVYPSTPADAKGLLIAAINDPNPVLYFEHKALYRSVSGDVPDEYYEVEIGKARHVRTGEDVTIITYGYGVIWAEEYAANHPEISIDILDLRTLLPLDYEAIRAAVQRTGRVVILHEDTLTGGIGGEIAAWIGEHCFQLLDAPVMRCASLDTPVPFNTELETNFLAKARLGETVERLMNY

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
55 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
99 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
100 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
101 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
102 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
103 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
104 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
105 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
106 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
109 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
116 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
117 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
118 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
119 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
120 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
121 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
122 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
123 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
124 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
125 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
128 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
129 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
130 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
131 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
132 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
133 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
134 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
137 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
138 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
139 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
140 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
143 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
154 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
155 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
156 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
157 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
158 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
159 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
160 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
161 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
162 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
163 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
165 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
166 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
167 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
168 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
169 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
170 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
171 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
172 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
173 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
174 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
175 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
176 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
177 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
178 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
179 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
180 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
181 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
182 2738541278 Niastella sp. CF465 Isolate Unclassified
183 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
184 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
185 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
186 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.34
Metatranscriptomes 0
Isolates 1.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.96
Nodule 0
Rhizoplane 0.33
Rhizosphere 88.74
Stem 0
Stem Tuber 0
Unclassified 1.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10044757 3300009147 Bacteria 6226
2 rootH1_10000450 3300003316 Bacteria 53148
3 rootH1_10009104 3300003316 Bacteria 13377
4 rootH2_10001503 3300003320 Bacteria 76614
5 rootH2_10017101 3300003320 Bacteria 5710
6 rootL2_10001124 3300003322 Bacteria 72110
7 rootL2_10030891 3300003322 Bacteria 12757
8 rootL2_10166955 3300003322 Bacteria 4262
9 rootH1_10008582 3300003323 Bacteria 172664
10 Ga0065165_1000470 3300005262 Bacteria 62866
11 Ga0070658_10012727 3300005327 Bacteria 6748
12 Ga0070658_10041012 3300005327 Bacteria 3734
13 Ga0068869_100017587 3300005334 Unclassified 4849
14 Ga0068869_100056635 3300005334 Bacteria 2859
15 Ga0070666_10000096 3300005335 Bacteria 60717
16 Ga0070680_100002379 3300005336 Bacteria 13909
17 Ga0070682_100000012 3300005337 Bacteria 265658
18 Ga0070682_100002356 3300005337 Bacteria 10469
19 Ga0070660_100066989 3300005339 Bacteria 2797
20 Ga0070689_100024169 3300005340 Bacteria 4556
21 Ga0070669_100021647 3300005353 Bacteria 4595
22 Ga0070669_100062792 3300005353 Bacteria 2732
23 Ga0070659_100011183 3300005366 Bacteria 6632
24 Ga0070701_10007889 3300005438 Bacteria 4577
25 Ga0070678_100011902 3300005456 Bacteria 5384
26 Ga0070681_10013599 3300005458 Bacteria 8098
27 Ga0070681_10020569 3300005458 Bacteria 6613
28 Ga0070706_100008235 3300005467 Bacteria 9723
29 Ga0070706_100053628 3300005467 Bacteria 3721
30 Ga0070707_100013130 3300005468 Bacteria 7743
31 Ga0070699_100002893 3300005518 Bacteria 15282
32 Ga0070679_100000099 3300005530 Bacteria 66873
33 Ga0070679_100034114 3300005530 Bacteria 5042
34 Ga0070697_100004859 3300005536 Bacteria 10307
35 Ga0068853_100013117 3300005539 Bacteria 6762
36 Ga0068853_100045171 3300005539 Bacteria 3773
37 Ga0070695_100000245 3300005545 Bacteria 27029
38 Ga0070693_100037750 3300005547 Bacteria 2695
39 Ga0070704_100075860 3300005549 Bacteria 2457
40 Ga0068855_100016424 3300005563 Bacteria 8900
41 Ga0068855_100045986 3300005563 Bacteria 5160
42 Ga0070664_100001016 3300005564 Bacteria 22026
43 Ga0068857_100083436 3300005577 Bacteria 2855
44 Ga0068856_100000853 3300005614 Bacteria 32799
45 Ga0068856_100049223 3300005614 Bacteria 4154
46 Ga0068856_100168584 3300005614 Bacteria 2201
47 Ga0068859_100000028 3300005617 Bacteria 180121
48 Ga0068859_100004205 3300005617 Bacteria 14695
49 Ga0068859_100004961 3300005617 Bacteria 13515
50 Ga0068859_100010043 3300005617 Bacteria 9548
51 Ga0068859_100015505 3300005617 Bacteria 7657
52 Ga0068861_100090443 3300005719 Bacteria 2414
53 Ga0068863_100026233 3300005841 Bacteria 5560
54 Ga0068858_100098777 3300005842 Bacteria 2722
55 Ga0068860_100001226 3300005843 Bacteria 27951
56 Ga0068860_100027621 3300005843 Bacteria 5465
57 Ga0068860_100042831 3300005843 Bacteria 4321
58 Ga0081539_10026520 3300005985 Bacteria 3695
59 Ga0075365_10006455 3300006038 Bacteria 6452
60 Ga0075364_10046969 3300006051 Bacteria 2811
61 Ga0070716_100054057 3300006173 Bacteria 2292
62 Ga0075367_10016139 3300006178 Bacteria 4075
63 Ga0075366_10001846 3300006195 Bacteria 10684
64 Ga0068871_100041255 3300006358 Bacteria 3700
65 Ga0075428_100000519 3300006844 Bacteria 39130
66 Ga0075428_100008805 3300006844 Bacteria 11199
67 Ga0075428_100013786 3300006844 Bacteria 9004
68 Ga0075428_100017536 3300006844 Bacteria 7909
69 Ga0075428_100025335 3300006844 Bacteria 6565
70 Ga0075428_100071844 3300006844 Bacteria 3782
71 Ga0075430_100095653 3300006846 Bacteria 2482
72 Ga0075430_100098242 3300006846 Bacteria 2446
73 Ga0075429_100001635 3300006880 Bacteria 18519
74 Ga0075429_100071848 3300006880 Bacteria 3013
75 Ga0097620_100000028 3300006931 Bacteria 180121
76 Ga0097620_100004205 3300006931 Bacteria 14695
77 Ga0097620_100004961 3300006931 Bacteria 13515
78 Ga0097620_100010043 3300006931 Bacteria 9548
79 Ga0097620_100015505 3300006931 Bacteria 7657
80 Ga0105240_10002363 3300009093 Bacteria 30416
81 Ga0105240_10002407 3300009093 Bacteria 30067
82 Ga0105240_10007767 3300009093 Bacteria 15513
83 Ga0105240_10016355 3300009093 Bacteria 10045
84 Ga0111539_10002481 3300009094 Bacteria 24471
85 Ga0111539_10013548 3300009094 Bacteria 10193
86 Ga0111539_10014554 3300009094 Bacteria 9822
87 Ga0111539_10034723 3300009094 Bacteria 6110
88 Ga0111539_10073493 3300009094 Bacteria 4031
89 Ga0105247_10026626 3300009101 Bacteria 3493
90 Ga0114129_10009363 3300009147 Bacteria 13967
91 Ga0114129_10017562 3300009147 Bacteria 10183
92 Ga0114129_10050989 3300009147 Bacteria 5811
93 Ga0114129_10084502 3300009147 Bacteria 4406
94 Ga0105241_10000056 3300009174 Bacteria 84758
95 Ga0105249_10072498 3300009553 Bacteria 3183
96 Ga0105239_10022448 3300010375 Bacteria 6957
97 Ga0105239_10046255 3300010375 Bacteria 4769
98 Ga0157373_10020238 3300013100 Bacteria 4840
99 Ga0157373_10049554 3300013100 Bacteria 2993
100 Ga0157371_10008467 3300013102 Bacteria 8188
101 Ga0157371_10016187 3300013102 Bacteria 5572
102 Ga0157370_10000491 3300013104 Bacteria 49237
103 Ga0157370_10045599 3300013104 Bacteria 4205
104 Ga0157369_10005089 3300013105 Bacteria 15390
105 Ga0157369_10052440 3300013105 Bacteria 4413
106 Ga0157378_10024789 3300013297 Bacteria 5282
107 Ga0163162_10000153 3300013306 Bacteria 63805
108 Ga0163162_10051015 3300013306 Bacteria 4150
109 Ga0157372_10011877 3300013307 Bacteria 9279
110 Ga0157372_10027246 3300013307 Bacteria 6221
111 Ga0163163_10002810 3300014325 Bacteria 14722
112 Ga0157380_10017859 3300014326 Bacteria 5258
113 Ga0157377_10013391 3300014745 Bacteria 4150
114 Ga0157376_10000961 3300014969 Bacteria 18769
115 Ga0209050_1003354 3300025298 Bacteria 11932
116 Ga0207680_10000048 3300025903 Bacteria 58651
117 Ga0207647_10000360 3300025904 Bacteria 37076
118 Ga0207643_10018882 3300025908 Bacteria 3777
119 Ga0207684_10003399 3300025910 Bacteria 15583
120 Ga0207684_10040200 3300025910 Bacteria 3966
121 Ga0207684_10040766 3300025910 Bacteria 3936
122 Ga0207654_10000315 3300025911 Bacteria 29061
123 Ga0207707_10000026 3300025912 Bacteria 175026
124 Ga0207707_10000067 3300025912 Bacteria 105764
125 Ga0207707_10050667 3300025912 Bacteria 3616
126 Ga0207695_10001064 3300025913 Bacteria 48020
127 Ga0207695_10004051 3300025913 Bacteria 20148
128 Ga0207695_10006647 3300025913 Bacteria 14920
129 Ga0207695_10030394 3300025913 Bacteria 5946
130 Ga0207671_10021427 3300025914 Unclassified 4904
131 Ga0207660_10015871 3300025917 Unclassified 4978
132 Ga0207662_10002638 3300025918 Bacteria 9046
133 Ga0207657_10063732 3300025919 Bacteria 3149
134 Ga0207652_10000109 3300025921 Bacteria 89337
135 Ga0207652_10000791 3300025921 Bacteria 30182
136 Ga0207652_10026159 3300025921 Bacteria 4857
137 Ga0207646_10008748 3300025922 Bacteria 10106
138 Ga0207650_10005869 3300025925 Bacteria 8382
139 Ga0207706_10013612 3300025933 Bacteria 7387
140 Ga0207706_10036335 3300025933 Bacteria 4376
141 Ga0207691_10004229 3300025940 Bacteria 13944
142 Ga0207691_10014020 3300025940 Bacteria 7647
143 Ga0207691_10047487 3300025940 Unclassified 3939
144 Ga0207689_10005324 3300025942 Bacteria 11533
145 Ga0207689_10055331 3300025942 Bacteria 3266
146 Ga0207661_10014720 3300025944 Bacteria 5739
147 Ga0207679_10026716 3300025945 Bacteria 3984
148 Ga0207667_10031685 3300025949 Bacteria 5705
149 Ga0207651_10018261 3300025960 Bacteria 4168
150 Ga0207640_10076272 3300025981 Bacteria 2275
151 Ga0207703_10005858 3300026035 Bacteria 9842
152 Ga0207678_10010282 3300026067 Bacteria 8213
153 Ga0207708_10007737 3300026075 Bacteria 7958
154 Ga0207702_10000818 3300026078 Bacteria 32910
155 Ga0207641_10000844 3300026088 Bacteria 32550
156 Ga0207676_10033710 3300026095 Bacteria 3871
157 Ga0207675_100011805 3300026118 Bacteria 8166
158 Ga0207675_100034961 3300026118 Bacteria 4686
159 Ga0207683_10005178 3300026121 Bacteria 11194
160 Ga0207683_10014188 3300026121 Bacteria 6789
161 Ga0207428_10001654 3300027907 Bacteria 23163
162 Ga0207428_10064467 3300027907 Bacteria 2892
163 Ga0268264_10001032 3300028381 Bacteria 27988
164 Ga0268264_10001286 3300028381 Bacteria 23701
165 Ga0268264_10033649 3300028381 Bacteria 4213
166 Ga0307517_10000268 3300028786 Bacteria 89531
167 Ga0307515_10000009 3300028794 Bacteria 653206
168 Ga0307515_10130734 3300028794 Bacteria 2768
169 Ga0265327_10000024 3300031251 Bacteria 382499
170 Ga0265327_10020080 3300031251 Bacteria 4085
171 Ga0307509_10022214 3300031507 Bacteria 7159
172 Ga0307509_10035025 3300031507 Bacteria 5514
173 Ga0307408_100002166 3300031548 Bacteria 14056
174 Ga0307408_100005476 3300031548 Bacteria 8493
175 Ga0307408_100036761 3300031548 Bacteria 3444
176 Ga0316579_10008037 3300031691 Bacteria 4381
177 Ga0316577_10000083 3300031733 Bacteria 24809
178 Ga0307410_10005344 3300031852 Bacteria 6788
179 Ga0307409_100042962 3300031995 Bacteria 3389
180 Ga0307416_100008586 3300032002 Bacteria 6605
181 Ga0307416_100063847 3300032002 Bacteria 3018
182 Ga0307414_10000118 3300032004 Bacteria 56182
183 Ga0395899_0000173 3300037312 Bacteria 96904
184 Ga0395899_0000913 3300037312 Bacteria 27769
185 Ga0395899_0021018 3300037312 Bacteria 4949
186 Ga0395899_0056468 3300037312 Bacteria 2901
187 Ga0395900_0002533 3300037418 Bacteria 20016
188 Ga0395900_0016244 3300037418 Bacteria 7584
189 Ga0395900_0045852 3300037418 Bacteria 4502
190 Ga0395900_0155688 3300037418 Bacteria 2334
191 Ga0395898_0000730 3300037466 Bacteria 57720
192 Ga0395898_0035964 3300037466 Bacteria 4922
193 Ga0395898_0040503 3300037466 Bacteria 4606
194 Ga0395905_0000003 3300037471 Bacteria 1347396
195 Ga0316581_0002348 3300037588 Bacteria 4507
196 Ga0395901_0004575 3300038443 Bacteria 13970
197 Ga0395901_0115085 3300038443 Bacteria 2825
198 Ga0395901_0168651 3300038443 Bacteria 2297
199 Ga0439436_0011119 3300041404 Bacteria 2736
200 Ga0439457_003931 3300042014 Bacteria 3965
201 Ga0451577_0000161 3300042876 Bacteria 146704
202 Ga0451577_0001203 3300042876 Bacteria 36232
203 Ga0451577_0004269 3300042876 Bacteria 15196
204 Ga0451577_0005717 3300042876 Bacteria 12618
205 Ga0451577_0060665 3300042876 Bacteria 3372
206 Ga0466969_0000453 3300044656 Bacteria 22543
207 Ga0466972_0000080 3300044658 Bacteria 89226
208 Ga0466966_0000096 3300044684 Bacteria 54307
209 Ga0466964_0021010 3300044706 Bacteria 2521
210 Ga0453684_0001617 3300044712 Bacteria 61681
211 Ga0453684_0026575 3300044712 Bacteria 8348
212 Ga0453684_0060090 3300044712 Bacteria 4893
213 Ga0466968_0015405 3300044735 Bacteria 3030
214 Ga0466957_0002445 3300044842 Bacteria 9969
215 Ga0466957_0003258 3300044842 Bacteria 8888
216 Ga0466959_0000014 3300045049 Bacteria 150962
217 Ga0466959_0001662 3300045049 Bacteria 13780
218 Ga0451576_0000012 3300045051 Bacteria 674684
219 Ga0451576_0031746 3300045051 Bacteria 5630
220 Ga0451576_0143571 3300045051 Bacteria 2489
221 Ga0451576_0187556 3300045051 Bacteria 2159
222 Ga0495629_0000387 3300046459 Bacteria 36902
223 Ga0495629_0025519 3300046459 Unclassified 4199
224 Ga0495638_0000004 3300046460 Bacteria 700795
225 Ga0495582_0005515 3300046473 Bacteria 7048
226 Ga0495594_0005693 3300046499 Bacteria 6407
227 Ga0495668_0000384 3300046616 Bacteria 58265
228 Ga0495634_0041391 3300046642 Bacteria 3129
229 Ga0495625_0011897 3300046660 Bacteria 7065
230 Ga0495635_0001289 3300046663 Bacteria 16744
231 Ga0495658_0011445 3300046683 Bacteria 4463
232 Ga0495613_0094194 3300046689 Bacteria 2167
233 Ga0495581_0005429 3300047315 Bacteria 7374
234 Ga0495672_0002834 3300047320 Bacteria 15421
235 Ga0495680_0010822 3300047322 Bacteria 8120
236 Ga0495686_0014318 3300047472 Bacteria 5462
237 Ga0496104_0057500 3300048907 Bacteria 3680
238 Ga0501290_000930 3300049513 Bacteria 4248
239 Ga0501031_0001144 3300049568 Bacteria 16132
240 Ga0501032_0006738 3300049569 Bacteria 8431
241 Ga0501032_0011141 3300049569 Bacteria 6462
242 Ga0501033_0000045 3300049570 Bacteria 126661
243 Ga0501034_0000682 3300049571 Bacteria 51648
244 Ga0501034_0080344 3300049571 Bacteria 3264
245 Ga0501039_0094223 3300049575 Bacteria 2334
246 Ga0501040_0023805 3300049576 Bacteria 4106
247 Ga0501043_0002061 3300049579 Bacteria 17140
248 Ga0501046_0029903 3300049580 Bacteria 4426
249 Ga0501047_0017470 3300049581 Bacteria 6872
250 Ga0501047_0031026 3300049581 Bacteria 5153
251 Ga0501048_0058939 3300049582 Bacteria 2721
252 Ga0501070_0048472 3300049586 Bacteria 3528
253 Ga0501074_0054148 3300049590 Bacteria 2894
254 Ga0501198_000404 3300049649 Bacteria 5320
255 Ga0501223_004740 3300049663 Bacteria 2893
256 Ga0501235_000033 3300049669 Bacteria 22695
257 Ga0501249_000037 3300049679 Bacteria 63492
258 Ga0501221_000390 3300049704 Bacteria 6716
259 Ga0501225_0001669 3300049705 Bacteria 6939
260 Ga0501225_0001827 3300049705 Bacteria 6672
261 Ga0501079_0067046 3300049741 Bacteria 2770
262 Ga0501264_000390 3300049761 Bacteria 6797
263 Ga0501035_0044829 3300049822 Bacteria 3980
264 Ga0501035_0070657 3300049822 Bacteria 3092
265 Ga0501044_0000502 3300049823 Bacteria 47572
266 Ga0501044_0007617 3300049823 Bacteria 11907
267 Ga0501044_0010226 3300049823 Bacteria 10190
268 nmdc:mga0k408_2561_c1 3300050493 Bacteria 9655
269 nmdc:mga07m45_57624_c1 3300050496 Bacteria 2197
270 nmdc:mga05p37_13887_c1 3300050507 Bacteria 9652
271 nmdc:mga05p37_144709_c1 3300050507 Bacteria 2911
272 nmdc:mga05p37_30806_c1 3300050507 Bacteria 6547
273 nmdc:mga05p37_35031_c1 3300050507 Bacteria 6154
274 nmdc:mga05p37_73246_c1 3300050507 Bacteria 4215
275 nmdc:mga09592_1306_c1 3300050508 Bacteria 20044
276 nmdc:mga09592_50149_c1 3300050508 Bacteria 3521
277 nmdc:mga06r32_33563_c1 3300050510 Bacteria 4834
278 nmdc:mga06r32_43515_c1 3300050510 Bacteria 4273
279 nmdc:mga08y16_22904_c1 3300050511 Bacteria 6592
280 nmdc:mga08y16_36447_c1 3300050511 Bacteria 5166
281 nmdc:mga08y16_5430_c1 3300050511 Bacteria 13331
282 nmdc:mga08y16_63377_c1 3300050511 Bacteria 3860
283 nmdc:mga08y16_7679_c1 3300050511 Bacteria 8901
284 Ga0495619_0000472 3300053085 Bacteria 27166
285 Ga0500578_0000325 3300053086 Bacteria 58251
286 Ga0500578_0072630 3300053086 Bacteria 2192
287 Ga0500583_0000001 3300053092 Bacteria 241642
288 Ga0500555_007478 3300053103 Bacteria 3103
289 Ga0500618_000021 3300053125 Bacteria 160813
290 Ga0500568_0000380 3300053139 Bacteria 33995
291 Ga0500568_0014942 3300053139 Bacteria 3486
292 Ga0500616_0000015 3300053153 Bacteria 633259
293 Ga0500616_0044574 3300053153 Bacteria 2366
294 Ga0500622_0000075 3300053156 Bacteria 109513
295 Ga0590071_001926 3300059421 Bacteria 5313
296 Ga0590075_001047 3300059424 Bacteria 7137
297 Ga0466962_0012015 3300061719 Bacteria 4165
298 2738725458 2738541278 Bacteria 9755573
299 2740031813 2739367866 Bacteria 4215900
300 2833643683 2833640130 Bacteria 4858325
301 2904557104 2904555929 Bacteria 5218588
302 2919694395 2919692658 Bacteria 5943958
303 Ga0114129_10044757
304 rootH1_10000450
305 rootH1_10009104
306 rootH2_10001503
307 rootH2_10017101
308 rootL2_10001124
309 rootL2_10030891
310 rootL2_10166955
311 rootH1_10008582
312 Ga0065165_1000470
313 Ga0070658_10012727
314 Ga0070658_10041012
315 Ga0068869_100017587
316 Ga0068869_100056635
317 Ga0070666_10000096
318 Ga0070680_100002379
319 Ga0070682_100000012
320 Ga0070682_100002356
321 Ga0070660_100066989
322 Ga0070689_100024169
323 Ga0070669_100021647
324 Ga0070669_100062792
325 Ga0070659_100011183
326 Ga0070701_10007889
327 Ga0070678_100011902
328 Ga0070681_10013599
329 Ga0070681_10020569
330 Ga0070706_100008235
331 Ga0070706_100053628
332 Ga0070707_100013130
333 Ga0070699_100002893
334 Ga0070679_100000099
335 Ga0070679_100034114
336 Ga0070697_100004859
337 Ga0068853_100013117
338 Ga0068853_100045171
339 Ga0070695_100000245
340 Ga0070693_100037750
341 Ga0070704_100075860
342 Ga0068855_100016424
343 Ga0068855_100045986
344 Ga0070664_100001016
345 Ga0068857_100083436
346 Ga0068856_100000853
347 Ga0068856_100049223
348 Ga0068856_100168584
349 Ga0068859_100000028
350 Ga0068859_100004205
351 Ga0068859_100004961
352 Ga0068859_100010043
353 Ga0068859_100015505
354 Ga0068861_100090443
355 Ga0068863_100026233
356 Ga0068858_100098777
357 Ga0068860_100001226
358 Ga0068860_100027621
359 Ga0068860_100042831
360 Ga0081539_10026520
361 Ga0075365_10006455
362 Ga0075364_10046969
363 Ga0070716_100054057
364 Ga0075367_10016139
365 Ga0075366_10001846
366 Ga0068871_100041255
367 Ga0075428_100000519
368 Ga0075428_100008805
369 Ga0075428_100013786
370 Ga0075428_100017536
371 Ga0075428_100025335
372 Ga0075428_100071844
373 Ga0075430_100095653
374 Ga0075430_100098242
375 Ga0075429_100001635
376 Ga0075429_100071848
377 Ga0097620_100000028
378 Ga0097620_100004205
379 Ga0097620_100004961
380 Ga0097620_100010043
381 Ga0097620_100015505
382 Ga0105240_10002363
383 Ga0105240_10002407
384 Ga0105240_10007767
385 Ga0105240_10016355
386 Ga0111539_10002481
387 Ga0111539_10013548
388 Ga0111539_10014554
389 Ga0111539_10034723
390 Ga0111539_10073493
391 Ga0105247_10026626
392 Ga0114129_10009363
393 Ga0114129_10017562
394 Ga0114129_10050989
395 Ga0114129_10084502
396 Ga0105241_10000056
397 Ga0105249_10072498
398 Ga0105239_10022448
399 Ga0105239_10046255
400 Ga0157373_10020238
401 Ga0157373_10049554
402 Ga0157371_10008467
403 Ga0157371_10016187
404 Ga0157370_10000491
405 Ga0157370_10045599
406 Ga0157369_10005089
407 Ga0157369_10052440
408 Ga0157378_10024789
409 Ga0163162_10000153
410 Ga0163162_10051015
411 Ga0157372_10011877
412 Ga0157372_10027246
413 Ga0163163_10002810
414 Ga0157380_10017859
415 Ga0157377_10013391
416 Ga0157376_10000961
417 Ga0209050_1003354
418 Ga0207680_10000048
419 Ga0207647_10000360
420 Ga0207643_10018882
421 Ga0207684_10003399
422 Ga0207684_10040200
423 Ga0207684_10040766
424 Ga0207654_10000315
425 Ga0207707_10000026
426 Ga0207707_10000067
427 Ga0207707_10050667
428 Ga0207695_10001064
429 Ga0207695_10004051
430 Ga0207695_10006647
431 Ga0207695_10030394
432 Ga0207671_10021427
433 Ga0207660_10015871
434 Ga0207662_10002638
435 Ga0207657_10063732
436 Ga0207652_10000109
437 Ga0207652_10000791
438 Ga0207652_10026159
439 Ga0207646_10008748
440 Ga0207650_10005869
441 Ga0207706_10013612
442 Ga0207706_10036335
443 Ga0207691_10004229
444 Ga0207691_10014020
445 Ga0207691_10047487
446 Ga0207689_10005324
447 Ga0207689_10055331
448 Ga0207661_10014720
449 Ga0207679_10026716
450 Ga0207667_10031685
451 Ga0207651_10018261
452 Ga0207640_10076272
453 Ga0207703_10005858
454 Ga0207678_10010282
455 Ga0207708_10007737
456 Ga0207702_10000818
457 Ga0207641_10000844
458 Ga0207676_10033710
459 Ga0207675_100011805
460 Ga0207675_100034961
461 Ga0207683_10005178
462 Ga0207683_10014188
463 Ga0207428_10001654
464 Ga0207428_10064467
465 Ga0268264_10001032
466 Ga0268264_10001286
467 Ga0268264_10033649
468 Ga0307517_10000268
469 Ga0307515_10000009
470 Ga0307515_10130734
471 Ga0265327_10000024
472 Ga0265327_10020080
473 Ga0307509_10022214
474 Ga0307509_10035025
475 Ga0307408_100002166
476 Ga0307408_100005476
477 Ga0307408_100036761
478 Ga0316579_10008037
479 Ga0316577_10000083
480 Ga0307410_10005344
481 Ga0307409_100042962
482 Ga0307416_100008586
483 Ga0307416_100063847
484 Ga0307414_10000118
485 Ga0395899_0000173
486 Ga0395899_0000913
487 Ga0395899_0021018
488 Ga0395899_0056468
489 Ga0395900_0002533
490 Ga0395900_0016244
491 Ga0395900_0045852
492 Ga0395900_0155688
493 Ga0395898_0000730
494 Ga0395898_0035964
495 Ga0395898_0040503
496 Ga0395905_0000003
497 Ga0316581_0002348
498 Ga0395901_0004575
499 Ga0395901_0115085
500 Ga0395901_0168651
501 Ga0439436_0011119
502 Ga0439457_003931
503 Ga0451577_0000161
504 Ga0451577_0001203
505 Ga0451577_0004269
506 Ga0451577_0005717
507 Ga0451577_0060665
508 Ga0466969_0000453
509 Ga0466972_0000080
510 Ga0466966_0000096
511 Ga0466964_0021010
512 Ga0453684_0001617
513 Ga0453684_0026575
514 Ga0453684_0060090
515 Ga0466968_0015405
516 Ga0466957_0002445
517 Ga0466957_0003258
518 Ga0466959_0000014
519 Ga0466959_0001662
520 Ga0451576_0000012
521 Ga0451576_0031746
522 Ga0451576_0143571
523 Ga0451576_0187556
524 Ga0495629_0000387
525 Ga0495629_0025519
526 Ga0495638_0000004
527 Ga0495582_0005515
528 Ga0495594_0005693
529 Ga0495668_0000384
530 Ga0495634_0041391
531 Ga0495625_0011897
532 Ga0495635_0001289
533 Ga0495658_0011445
534 Ga0495613_0094194
535 Ga0495581_0005429
536 Ga0495672_0002834
537 Ga0495680_0010822
538 Ga0495686_0014318
539 Ga0496104_0057500
540 Ga0501290_000930
541 Ga0501031_0001144
542 Ga0501032_0006738
543 Ga0501032_0011141
544 Ga0501033_0000045
545 Ga0501034_0000682
546 Ga0501034_0080344
547 Ga0501039_0094223
548 Ga0501040_0023805
549 Ga0501043_0002061
550 Ga0501046_0029903
551 Ga0501047_0017470
552 Ga0501047_0031026
553 Ga0501048_0058939
554 Ga0501070_0048472
555 Ga0501074_0054148
556 Ga0501198_000404
557 Ga0501223_004740
558 Ga0501235_000033
559 Ga0501249_000037
560 Ga0501221_000390
561 Ga0501225_0001669
562 Ga0501225_0001827
563 Ga0501079_0067046
564 Ga0501264_000390
565 Ga0501035_0044829
566 Ga0501035_0070657
567 Ga0501044_0000502
568 Ga0501044_0007617
569 Ga0501044_0010226
570 nmdc:mga0k408_2561_c1
571 nmdc:mga07m45_57624_c1
572 nmdc:mga05p37_13887_c1
573 nmdc:mga05p37_144709_c1
574 nmdc:mga05p37_30806_c1
575 nmdc:mga05p37_35031_c1
576 nmdc:mga05p37_73246_c1
577 nmdc:mga09592_1306_c1
578 nmdc:mga09592_50149_c1
579 nmdc:mga06r32_33563_c1
580 nmdc:mga06r32_43515_c1
581 nmdc:mga08y16_22904_c1
582 nmdc:mga08y16_36447_c1
583 nmdc:mga08y16_5430_c1
584 nmdc:mga08y16_63377_c1
585 nmdc:mga08y16_7679_c1
586 Ga0495619_0000472
587 Ga0500578_0000325
588 Ga0500578_0072630
589 Ga0500583_0000001
590 Ga0500555_007478
591 Ga0500618_000021
592 Ga0500568_0000380
593 Ga0500568_0014942
594 Ga0500616_0000015
595 Ga0500616_0044574
596 Ga0500622_0000075
597 Ga0590071_001926
598 Ga0590075_001047
599 Ga0466962_0012015
600 2738725458
601 2740031813
602 2833643683
603 2904557104
604 2919694395

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00676

E1_dh

Dehydrogenase E1 component

17

306

0.97

PF02780

Transketolase_C

Transketolase, C-terminal domain

575

693

0.95

PF02779

Transket_pyr

Transketolase, pyrimidine binding domain

386

561

0.93

PF13292

DXP_synthase_N

1-deoxy-D-xylulose-5-phosphate synthase

71

241

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3duf-assembly2.cif.gz_H snapshots of catalysis in the e1 subunit of the pyruvate dehydrogenase multi-enzyme complex 0.978 340 659
1umd-assembly1.cif.gz_D branched-chain 2-oxo acid dehydrogenase (e1) from thermus thermophilus hb8 with 4-methyl-2-oxopentanoate as an intermediate 0.9704 340 659
3duf-assembly2.cif.gz_H snapshots of catalysis in the e1 subunit of the pyruvate dehydrogenase multi-enzyme complex 0.9632 340 659
1w88-assembly2.cif.gz_F the crystal structure of pyruvate dehydrogenase e1(d180n,e183q) bound to the peripheral subunit binding domain of e2 0.9631 340 659
1w88-assembly2.cif.gz_H the crystal structure of pyruvate dehydrogenase e1(d180n,e183q) bound to the peripheral subunit binding domain of e2 0.9622 340 659
ID Description Score Start End Superfamily
1um9B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9787 340 531 3.40.50.970
1ik6A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9715 525 627 3.40.50.920
af_Q10G39_79_267_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9651 342 528 3.40.50.970
af_E5RPJ6_273_405_3.40.50.920 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9638 529 657 3.40.50.920
af_Q09171_230_364_3.40.50.920 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9603 529 657 3.40.50.920
ID Description Score Start End GO Terms
AF-A0A350NX28-F1-model_v4 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC 1.2.4.4) 0.9932 385 659 GO:0003824
GO:0007584
GO:0009083
AF-A0A1I2HYZ1-F1-model_v4 2-oxoisovalerate dehydrogenase E1 component 0.9909 1 659 GO:0016624
AF-A0A1I2HYZ1-F1-model_v4 2-oxoisovalerate dehydrogenase E1 component 0.9894 1 659 GO:0016624
AF-A0A7W0MXY5-F1-model_v4 Alpha-ketoacid dehydrogenase subunit beta 0.9875 340 514 GO:0000287
AF-A0A350NX28-F1-model_v4 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC 1.2.4.4) 0.986 385 659 GO:0003824
GO:0007584
GO:0009083

Map