F397104

General Info

Members Datasets Scaffolds Average Seq Length
303 211 606 362

Family's Representative Sequence

Representative Sequence 3300031456|Ga0307513_10103429|Ga0307513_101034292
Length 377
Sequence MLKLEARPQPSKWMSFASPLLALAITVVIGVVLFMLLGKNPLSGLQVFFIEPLKTAYGLSELSVKATPLILIGLGLAVCYRSNVWNIGAEGQFIVGALAGGWVAMQAGPSLAFMGRGVVAAILLASVCGGMLWAAIVALLRDRFNASEILVSLMLVYVAEFLLGYLVYGPWKDPDGHNFPQSINFVAATKIPRLFDGLRINIGMPIALAAVLGFWALLFRTYRGFQLQVGGLAPLAARYAGFSSRSALWTALLMSGGMAGLAGGLEVAGPLGQITPYVPQGYGFAAIIVAYVGRLHPVGIIFSALLMSMFYIGGEFAQSRLGLPRSLTGVFQGLLLFTLLATDTLIAYRIRWRSVPPRPARAAAGVAPPLLKTGEGV

Samples

Sample ID Description Type Environment
1 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
4 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
5 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
6 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
7 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
8 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
42 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
43 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
65 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
68 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
70 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
99 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
102 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
103 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
104 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
105 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
106 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
107 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
108 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
109 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
110 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
113 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
114 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
115 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
116 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
117 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
118 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
119 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
120 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
121 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
123 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
124 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
125 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
126 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
127 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
128 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
129 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
130 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
131 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
132 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
133 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
134 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
135 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
136 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
137 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
138 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
139 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
140 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
141 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
142 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
143 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
144 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
145 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
146 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
147 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
148 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
149 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
150 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
151 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
152 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
153 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
154 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
155 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
156 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
157 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
158 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
159 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
160 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
161 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
162 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
163 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
164 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
165 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
166 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
167 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
168 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
169 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
170 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
171 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
172 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
173 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
174 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
175 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
176 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
177 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
182 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
183 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
184 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
185 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
187 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
188 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
189 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
190 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
191 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
192 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
193 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
194 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
195 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
196 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
197 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
198 2643221611 Acidovorax sp. Root219 Isolate Unclassified
199 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
200 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
201 2721755523 Delftia sp. HK171 Isolate Unclassified
202 2738541307 Variovorax sp. GV008 Isolate Unclassified
203 2738543013 Variovorax sp. BT01 Isolate Unclassified
204 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
205 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
206 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
207 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
208 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
209 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
210 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
211 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.05
Metatranscriptomes 0.33
Isolates 4.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.49
Nodule 0
Rhizoplane 3.63
Rhizosphere 68.32
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307513_10103429 3300031456 Bacteria 2864
2 rootH1_10011751 3300003316 Bacteria 1951
3 Ga0055539_1000323 3300003752 Bacteria 24450
4 Ga0055533_1000008 3300003756 Bacteria 575861
5 Ga0055530_10012543 3300003791 Bacteria 2948
6 Ga0055540_1000019 3300003792 Bacteria 210593
7 Ga0055531_10001990 3300003794 Bacteria 14204
8 Ga0065707_10086727 3300005295 Bacteria 5336
9 Ga0070658_10086716 3300005327 Bacteria 2575
10 Ga0070658_10184293 3300005327 Bacteria 1757
11 Ga0070676_10003138 3300005328 Bacteria 8542
12 Ga0070676_10077197 3300005328 Bacteria 2013
13 Ga0070690_100001021 3300005330 Bacteria 14305
14 Ga0070670_100073409 3300005331 Bacteria 2938
15 Ga0070670_100074994 3300005331 Bacteria 2907
16 Ga0070670_100224396 3300005331 Bacteria 1635
17 Ga0068869_100004213 3300005334 Bacteria 8928
18 Ga0070682_100027276 3300005337 Bacteria 3426
19 Ga0070682_100117315 3300005337 Bacteria 1782
20 Ga0068868_100028939 3300005338 Bacteria 4241
21 Ga0068868_100115422 3300005338 Bacteria 2186
22 Ga0068868_100182520 3300005338 Bacteria 1742
23 Ga0070660_100017496 3300005339 Bacteria 5227
24 Ga0070674_100040052 3300005356 Bacteria 3168
25 Ga0070673_100004139 3300005364 Bacteria 9137
26 Ga0070659_100179022 3300005366 Bacteria 1739
27 Ga0070667_100073183 3300005367 Bacteria 2921
28 Ga0070667_100267664 3300005367 Bacteria 1531
29 Ga0070700_100047989 3300005441 Bacteria 2645
30 Ga0070663_100039092 3300005455 Bacteria 3314
31 Ga0070662_100011126 3300005457 Bacteria 5926
32 Ga0070662_100046981 3300005457 Bacteria 3103
33 Ga0070662_100108476 3300005457 Bacteria 2111
34 Ga0068867_100001383 3300005459 Bacteria 16772
35 Ga0068867_100154591 3300005459 Bacteria 1804
36 Ga0070672_100289833 3300005543 Bacteria 1386
37 Ga0070665_100011988 3300005548 Bacteria 8750
38 Ga0070665_100021248 3300005548 Bacteria 6525
39 Ga0068855_100252714 3300005563 Bacteria 1966
40 Ga0068857_100018952 3300005577 Bacteria 6037
41 Ga0068857_100189786 3300005577 Bacteria 1871
42 Ga0068856_100318182 3300005614 Bacteria 1573
43 Ga0068852_100220795 3300005616 Bacteria 1802
44 Ga0068859_100369995 3300005617 Bacteria 1529
45 Ga0068864_100009645 3300005618 Bacteria 7964
46 Ga0068864_100201619 3300005618 Bacteria 1828
47 Ga0068866_10021605 3300005718 Bacteria 2967
48 Ga0068861_100041950 3300005719 Bacteria 3429
49 Ga0068870_10021419 3300005840 Bacteria 3161
50 Ga0068863_100085747 3300005841 Bacteria 2984
51 Ga0068860_100068145 3300005843 Bacteria 3381
52 Ga0075368_10004199 3300006042 Bacteria 4854
53 Ga0075363_100015053 3300006048 Bacteria 3793
54 Ga0075363_100048960 3300006048 Bacteria 2249
55 Ga0075364_10072884 3300006051 Bacteria 2263
56 Ga0075362_10015821 3300006177 Bacteria 3076
57 Ga0075367_10018334 3300006178 Bacteria 3860
58 Ga0075367_10059659 3300006178 Bacteria 2272
59 Ga0075369_10012112 3300006186 Bacteria 3402
60 Ga0075369_10084873 3300006186 Bacteria 1408
61 Ga0075366_10009626 3300006195 Bacteria 5400
62 Ga0075366_10027240 3300006195 Bacteria 3352
63 Ga0075366_10027948 3300006195 Bacteria 3309
64 Ga0075366_10120787 3300006195 Bacteria 1579
65 Ga0075370_10001774 3300006353 Bacteria 9638
66 Ga0075370_10002564 3300006353 Bacteria 8459
67 Ga0075370_10002636 3300006353 Bacteria 8377
68 Ga0075370_10002660 3300006353 Bacteria 8350
69 Ga0075370_10008934 3300006353 Bacteria 5179
70 Ga0075370_10010779 3300006353 Bacteria 4791
71 Ga0075370_10023701 3300006353 Bacteria 3383
72 Ga0068865_100035672 3300006881 Bacteria 3348
73 Ga0068865_100037566 3300006881 Bacteria 3271
74 Ga0097620_100370007 3300006931 Bacteria 1529
75 Ga0105240_10083700 3300009093 Bacteria 3914
76 Ga0105240_10116646 3300009093 Bacteria 3221
77 Ga0105240_10152901 3300009093 Bacteria 2747
78 Ga0105245_10489979 3300009098 Bacteria 1244
79 Ga0114129_10024195 3300009147 Bacteria 8608
80 Ga0105242_10006601 3300009176 Bacteria 8937
81 Ga0105237_10105187 3300009545 Bacteria 2813
82 Ga0105237_10304361 3300009545 Bacteria 1597
83 Ga0105249_10039082 3300009553 Bacteria 4307
84 Ga0105246_10147400 3300011119 Bacteria 1777
85 Ga0157369_10583226 3300013105 Bacteria 1155
86 Ga0157378_10084948 3300013297 Bacteria 2867
87 Ga0157378_10172789 3300013297 Bacteria 2028
88 Ga0163162_10033030 3300013306 Bacteria 5140
89 Ga0157375_10048415 3300013308 Bacteria 4158
90 Ga0157380_10069008 3300014326 Bacteria 2851
91 Ga0157379_10253151 3300014968 Bacteria 1599
92 Ga0157376_10224762 3300014969 Bacteria 1741
93 Ga0163161_10017333 3300017792 Bacteria 5040
94 Ga0206356_10714510 3300020070 Bacteria 1613
95 Ga0213872_10000201 3300021361 Bacteria 52929
96 Ga0213872_10030724 3300021361 Bacteria 2462
97 Ga0209674_100015 3300025226 Bacteria 697299
98 Ga0209563_100017 3300025230 Bacteria 796449
99 Ga0207427_100428 3300025231 Bacteria 23631
100 Ga0209677_100037 3300025253 Bacteria 286702
101 Ga0209677_101026 3300025253 Bacteria 13319
102 Ga0209759_1000938 3300025256 Bacteria 20998
103 Ga0209050_1000137 3300025298 Bacteria 178099
104 Ga0209051_1000071 3300025303 Bacteria 210843
105 Ga0209051_1003967 3300025303 Bacteria 9412
106 Ga0209257_1000367 3300025304 Bacteria 91077
107 Ga0207645_10004045 3300025907 Bacteria 10930
108 Ga0207645_10041860 3300025907 Bacteria 2931
109 Ga0207643_10043254 3300025908 Bacteria 2541
110 Ga0207705_10108400 3300025909 Bacteria 2050
111 Ga0207695_10017545 3300025913 Bacteria 8323
112 Ga0207695_10045364 3300025913 Bacteria 4666
113 Ga0207695_10121741 3300025913 Bacteria 2576
114 Ga0207695_10255895 3300025913 Bacteria 1649
115 Ga0207671_10098880 3300025914 Bacteria 2207
116 Ga0207657_10007760 3300025919 Bacteria 10956
117 Ga0207657_10036126 3300025919 Bacteria 4424
118 Ga0207650_10085331 3300025925 Bacteria 2402
119 Ga0207650_10179872 3300025925 Bacteria 1685
120 Ga0207687_10063682 3300025927 Bacteria 2611
121 Ga0207706_10071877 3300025933 Bacteria 3043
122 Ga0207706_10072283 3300025933 Bacteria 3034
123 Ga0207706_10224678 3300025933 Bacteria 1643
124 Ga0207686_10030457 3300025934 Bacteria 3194
125 Ga0207686_10070105 3300025934 Bacteria 2251
126 Ga0207709_10084699 3300025935 Bacteria 2053
127 Ga0207704_10117110 3300025938 Bacteria 1814
128 Ga0207691_10164677 3300025940 Bacteria 1943
129 Ga0207689_10247668 3300025942 Bacteria 1474
130 Ga0207658_10024985 3300025986 Bacteria 4181
131 Ga0207677_10010906 3300026023 Bacteria 5160
132 Ga0207677_10032415 3300026023 Bacteria 3359
133 Ga0207677_10055811 3300026023 Bacteria 2703
134 Ga0207639_10299338 3300026041 Bacteria 1421
135 Ga0207708_10028719 3300026075 Bacteria 4212
136 Ga0207648_10008884 3300026089 Bacteria 9673
137 Ga0207648_10078352 3300026089 Bacteria 2882
138 Ga0207676_10015446 3300026095 Bacteria 5508
139 Ga0207676_10113987 3300026095 Bacteria 2267
140 Ga0207674_10036634 3300026116 Bacteria 5108
141 Ga0207674_10041383 3300026116 Bacteria 4766
142 Ga0207675_100003808 3300026118 Bacteria 14700
143 Ga0207675_100107401 3300026118 Bacteria 2632
144 Ga0207683_10183319 3300026121 Bacteria 1899
145 Ga0209970_1002448 3300027614 Bacteria 3160
146 Ga0268264_10109892 3300028381 Bacteria 2413
147 Ga0265334_10051189 3300028573 Bacteria 1584
148 Ga0307517_10003161 3300028786 Bacteria 25882
149 Ga0307515_10003707 3300028794 Bacteria 32062
150 Ga0307515_10046073 3300028794 Bacteria 6678
151 Ga0307515_10096279 3300028794 Bacteria 3632
152 Ga0307515_10141802 3300028794 Bacteria 2572
153 Ga0307511_10123922 3300030521 Bacteria 1584
154 Ga0265328_10015694 3300031239 Bacteria 2963
155 Ga0265327_10001086 3300031251 Bacteria 37884
156 Ga0307513_10082319 3300031456 Bacteria 3314
157 Ga0307509_10041791 3300031507 Bacteria 4971
158 Ga0307509_10084315 3300031507 Bacteria 3274
159 Ga0307408_100000016 3300031548 Bacteria 356896
160 Ga0307408_100000438 3300031548 Bacteria 36836
161 Ga0307508_10000368 3300031616 Bacteria 54659
162 Ga0307514_10002570 3300031649 Bacteria 18641
163 Ga0307516_10001446 3300031730 Bacteria 32808
164 Ga0307516_10004186 3300031730 Bacteria 17970
165 Ga0307516_10169192 3300031730 Bacteria 1927
166 Ga0307405_10004083 3300031731 Bacteria 6857
167 Ga0307406_10003395 3300031901 Bacteria 8676
168 Ga0307416_100423437 3300032002 Bacteria 1376
169 Ga0307414_10204540 3300032004 Bacteria 1609
170 Ga0307510_10002010 3300033180 Bacteria 22941
171 Ga0307510_10034682 3300033180 Bacteria 5646
172 Ga0373948_0001340 3300034817 Bacteria 3384
173 Ga0373959_0002643 3300034820 Bacteria 2845
174 Ga0373939_0000097 3300035114 Bacteria 27307
175 Ga0373960_0004610 3300035121 Bacteria 3164
176 Ga0373931_0000147 3300035691 Bacteria 30931
177 Ga0373931_0011003 3300035691 Bacteria 4362
178 Ga0373931_0073840 3300035691 Bacteria 1867
179 Ga0373927_0001115 3300035695 Bacteria 20393
180 Ga0373947_0176747 3300035725 Bacteria 1388
181 Ga0373937_0363477 3300036401 Bacteria 1372
182 Ga0373925_0001344 3300037068 Bacteria 21480
183 Ga0395900_0000133 3300037418 Bacteria 124692
184 Ga0395900_0121743 3300037418 Bacteria 2677
185 Ga0395898_0000337 3300037466 Bacteria 106044
186 Ga0395898_0056178 3300037466 Bacteria 3838
187 Ga0395898_0499156 3300037466 Bacteria 1157
188 Ga0395905_0005678 3300037471 Bacteria 12687
189 Ga0395905_0018901 3300037471 Bacteria 6535
190 Ga0395905_0088116 3300037471 Bacteria 2909
191 Ga0395901_0001499 3300038443 Bacteria 24273
192 Ga0395901_0003981 3300038443 Bacteria 14866
193 Ga0395901_0154083 3300038443 Bacteria 2414
194 Ga0436365_1189087 3300039437 Bacteria 9084
195 Ga0436360_0145313 3300039438 Bacteria 2071
196 Ga0436361_0062839 3300039447 Bacteria 58101
197 Ga0436361_0264198 3300039447 Bacteria 2532
198 Ga0436361_0284474 3300039447 Bacteria 1855
199 Ga0451791_0578246 3300041451 Bacteria 2559
200 Ga0451807_0131389 3300041486 Bacteria 4923
201 Ga0439449_0002394 3300042007 Bacteria 7339
202 Ga0439451_027359 3300042009 Bacteria 1150
203 Ga0439464_0017232 3300042439 Bacteria 1958
204 Ga0466969_0000005 3300044656 Bacteria 167170
205 Ga0466969_0022808 3300044656 Bacteria 3228
206 Ga0466972_0008271 3300044658 Bacteria 5213
207 Ga0466972_0013182 3300044658 Bacteria 4151
208 Ga0466966_0004806 3300044684 Bacteria 8882
209 Ga0466966_0012632 3300044684 Bacteria 5597
210 Ga0466961_0039598 3300044693 Bacteria 3021
211 Ga0466961_0146663 3300044693 Bacteria 1475
212 Ga0466963_0005093 3300044694 Bacteria 7680
213 Ga0466964_0006859 3300044706 Bacteria 4250
214 Ga0466970_0026945 3300044765 Bacteria 3013
215 Ga0466957_0088770 3300044842 Bacteria 1934
216 Ga0466959_0004475 3300045049 Bacteria 9361
217 Ga0466959_0112530 3300045049 Bacteria 1941
218 Ga0451576_0158599 3300045051 Bacteria 2360
219 Ga0466958_0014932 3300045836 Bacteria 4440
220 Ga0466967_0018022 3300045976 Bacteria 5630
221 Ga0495590_0016805 3300046457 Bacteria 2640
222 Ga0495585_0032245 3300046492 Bacteria 2968
223 Ga0495583_0007625 3300046506 Bacteria 6754
224 Ga0495606_0002299 3300046507 Bacteria 22573
225 Ga0495630_0105090 3300046517 Bacteria 2138
226 Ga0495631_0100039 3300046518 Bacteria 1248
227 Ga0495632_0038178 3300046519 Bacteria 2433
228 Ga0495643_0002396 3300046522 Bacteria 14958
229 Ga0495642_0021489 3300046528 Bacteria 2538
230 Ga0495621_0012589 3300046539 Bacteria 2640
231 Ga0495597_0000435 3300046542 Bacteria 35678
232 Ga0495656_0004769 3300046615 Bacteria 4662
233 Ga0495668_0037542 3300046616 Bacteria 2710
234 Ga0495668_0038099 3300046616 Bacteria 2688
235 Ga0495588_0083090 3300046674 Bacteria 1673
236 Ga0495649_0000832 3300046694 Bacteria 24805
237 Ga0495649_0033997 3300046694 Bacteria 2806
238 Ga0495589_0012620 3300046794 Bacteria 4371
239 Ga0495660_0074104 3300046810 Bacteria 1799
240 Ga0495687_003254 3300047443 Bacteria 11981
241 Ga0495687_011539 3300047443 Bacteria 4742
242 Ga0495687_019818 3300047443 Bacteria 3290
243 Ga0495687_083729 3300047443 Bacteria 1241
244 Ga0495686_0001681 3300047472 Bacteria 22995
245 Ga0495686_0052979 3300047472 Bacteria 2543
246 Ga0496103_0039285 3300048906 Bacteria 2908
247 Ga0496104_0035824 3300048907 Bacteria 4636
248 Ga0496107_0040283 3300048910 Bacteria 3353
249 Ga0496108_0085614 3300048911 Bacteria 2676
250 Ga0496109_0034033 3300048912 Bacteria 4586
251 Ga0496110_0017385 3300048913 Bacteria 6016
252 Ga0496110_0080400 3300048913 Bacteria 2904
253 Ga0496113_0215189 3300048916 Bacteria 1530
254 Ga0496115_0048792 3300048918 Bacteria 3387
255 Ga0496122_0052369 3300048925 Bacteria 3090
256 Ga0496125_0005304 3300048928 Bacteria 14409
257 Ga0496126_0192334 3300048929 Bacteria 1727
258 Ga0501033_0022231 3300049570 Bacteria 4785
259 Ga0501034_0186373 3300049571 Bacteria 2038
260 Ga0501043_0022663 3300049579 Bacteria 4925
261 Ga0501047_0044958 3300049581 Bacteria 4268
262 Ga0501069_0031600 3300049585 Bacteria 2913
263 Ga0501070_0000931 3300049586 Bacteria 26365
264 Ga0501074_0018272 3300049590 Bacteria 5094
265 Ga0501080_0001450 3300049742 Bacteria 19946
266 Ga0501035_0000690 3300049822 Bacteria 36838
267 Ga0501035_0123661 3300049822 Bacteria 2260
268 Ga0501044_0002922 3300049823 Bacteria 19435
269 Ga0501044_0131707 3300049823 Bacteria 2494
270 nmdc:mga03683_16241_c1 3300050489 Bacteria 2792
271 nmdc:mga00v17_72454_c1 3300050491 Bacteria 2137
272 nmdc:mga0k408_171075_c1 3300050493 Bacteria 1295
273 nmdc:mga0k408_17782_c1 3300050493 Bacteria 3962
274 nmdc:mga0k408_22397_c1 3300050493 Bacteria 1808
275 nmdc:mga0k408_32893_c1 3300050493 Bacteria 2963
276 nmdc:mga0k408_43089_c1 3300050493 Bacteria 2600
277 nmdc:mga0k408_74164_c1 3300050493 Bacteria 1988
278 nmdc:mga06z11_14844_c1 3300050494 Bacteria 3462
279 nmdc:mga07m45_17915_c1 3300050496 Bacteria 3812
280 nmdc:mga07m45_17929_c1 3300050496 Bacteria 3443
281 nmdc:mga07m45_37216_c1 3300050496 Bacteria 2116
282 nmdc:mga07m45_52444_c1 3300050496 Bacteria 2303
283 nmdc:mga07m45_56489_c1 3300050496 Bacteria 2219
284 Ga0500610_0020779 3300053079 Bacteria 3210
285 Ga0500644_0028907 3300053088 Bacteria 1738
286 Ga0500593_009512 3300053117 Bacteria 4040
287 Ga0500568_0051715 3300053139 Bacteria 1615
288 Ga0500587_009810 3300053739 Bacteria 1219
289 Ga0466962_0028011 3300061719 Bacteria 2700
290 2644071160 2643221611 Bacteria 6820941
291 2644220214 2643221639 Bacteria 6649903
292 2644261257 2643221646 Bacteria 6433402
293 2722885169 2721755523 Bacteria 6430384
294 2738885401 2738541307 Bacteria 8606193
295 2739248432 2738543013 Bacteria 5618633
296 2776271455 2775506902 Bacteria 6208009
297 2776280035 2775506904 Bacteria 5954060
298 2839143855 2839138175 Bacteria 6549354
299 2881102903 2881101125 Bacteria 4590519
300 2887380734 2887375801 Bacteria 5334027
301 2894654394 2894652903 Bacteria 4587256
302 2919707456 2919704043 Bacteria 5560311
303 2928117901 2928115317 Bacteria 6477646
304 Ga0307513_10103429
305 rootH1_10011751
306 Ga0055539_1000323
307 Ga0055533_1000008
308 Ga0055530_10012543
309 Ga0055540_1000019
310 Ga0055531_10001990
311 Ga0065707_10086727
312 Ga0070658_10086716
313 Ga0070658_10184293
314 Ga0070676_10003138
315 Ga0070676_10077197
316 Ga0070690_100001021
317 Ga0070670_100073409
318 Ga0070670_100074994
319 Ga0070670_100224396
320 Ga0068869_100004213
321 Ga0070682_100027276
322 Ga0070682_100117315
323 Ga0068868_100028939
324 Ga0068868_100115422
325 Ga0068868_100182520
326 Ga0070660_100017496
327 Ga0070674_100040052
328 Ga0070673_100004139
329 Ga0070659_100179022
330 Ga0070667_100073183
331 Ga0070667_100267664
332 Ga0070700_100047989
333 Ga0070663_100039092
334 Ga0070662_100011126
335 Ga0070662_100046981
336 Ga0070662_100108476
337 Ga0068867_100001383
338 Ga0068867_100154591
339 Ga0070672_100289833
340 Ga0070665_100011988
341 Ga0070665_100021248
342 Ga0068855_100252714
343 Ga0068857_100018952
344 Ga0068857_100189786
345 Ga0068856_100318182
346 Ga0068852_100220795
347 Ga0068859_100369995
348 Ga0068864_100009645
349 Ga0068864_100201619
350 Ga0068866_10021605
351 Ga0068861_100041950
352 Ga0068870_10021419
353 Ga0068863_100085747
354 Ga0068860_100068145
355 Ga0075368_10004199
356 Ga0075363_100015053
357 Ga0075363_100048960
358 Ga0075364_10072884
359 Ga0075362_10015821
360 Ga0075367_10018334
361 Ga0075367_10059659
362 Ga0075369_10012112
363 Ga0075369_10084873
364 Ga0075366_10009626
365 Ga0075366_10027240
366 Ga0075366_10027948
367 Ga0075366_10120787
368 Ga0075370_10001774
369 Ga0075370_10002564
370 Ga0075370_10002636
371 Ga0075370_10002660
372 Ga0075370_10008934
373 Ga0075370_10010779
374 Ga0075370_10023701
375 Ga0068865_100035672
376 Ga0068865_100037566
377 Ga0097620_100370007
378 Ga0105240_10083700
379 Ga0105240_10116646
380 Ga0105240_10152901
381 Ga0105245_10489979
382 Ga0114129_10024195
383 Ga0105242_10006601
384 Ga0105237_10105187
385 Ga0105237_10304361
386 Ga0105249_10039082
387 Ga0105246_10147400
388 Ga0157369_10583226
389 Ga0157378_10084948
390 Ga0157378_10172789
391 Ga0163162_10033030
392 Ga0157375_10048415
393 Ga0157380_10069008
394 Ga0157379_10253151
395 Ga0157376_10224762
396 Ga0163161_10017333
397 Ga0206356_10714510
398 Ga0213872_10000201
399 Ga0213872_10030724
400 Ga0209674_100015
401 Ga0209563_100017
402 Ga0207427_100428
403 Ga0209677_100037
404 Ga0209677_101026
405 Ga0209759_1000938
406 Ga0209050_1000137
407 Ga0209051_1000071
408 Ga0209051_1003967
409 Ga0209257_1000367
410 Ga0207645_10004045
411 Ga0207645_10041860
412 Ga0207643_10043254
413 Ga0207705_10108400
414 Ga0207695_10017545
415 Ga0207695_10045364
416 Ga0207695_10121741
417 Ga0207695_10255895
418 Ga0207671_10098880
419 Ga0207657_10007760
420 Ga0207657_10036126
421 Ga0207650_10085331
422 Ga0207650_10179872
423 Ga0207687_10063682
424 Ga0207706_10071877
425 Ga0207706_10072283
426 Ga0207706_10224678
427 Ga0207686_10030457
428 Ga0207686_10070105
429 Ga0207709_10084699
430 Ga0207704_10117110
431 Ga0207691_10164677
432 Ga0207689_10247668
433 Ga0207658_10024985
434 Ga0207677_10010906
435 Ga0207677_10032415
436 Ga0207677_10055811
437 Ga0207639_10299338
438 Ga0207708_10028719
439 Ga0207648_10008884
440 Ga0207648_10078352
441 Ga0207676_10015446
442 Ga0207676_10113987
443 Ga0207674_10036634
444 Ga0207674_10041383
445 Ga0207675_100003808
446 Ga0207675_100107401
447 Ga0207683_10183319
448 Ga0209970_1002448
449 Ga0268264_10109892
450 Ga0265334_10051189
451 Ga0307517_10003161
452 Ga0307515_10003707
453 Ga0307515_10046073
454 Ga0307515_10096279
455 Ga0307515_10141802
456 Ga0307511_10123922
457 Ga0265328_10015694
458 Ga0265327_10001086
459 Ga0307513_10082319
460 Ga0307509_10041791
461 Ga0307509_10084315
462 Ga0307408_100000016
463 Ga0307408_100000438
464 Ga0307508_10000368
465 Ga0307514_10002570
466 Ga0307516_10001446
467 Ga0307516_10004186
468 Ga0307516_10169192
469 Ga0307405_10004083
470 Ga0307406_10003395
471 Ga0307416_100423437
472 Ga0307414_10204540
473 Ga0307510_10002010
474 Ga0307510_10034682
475 Ga0373948_0001340
476 Ga0373959_0002643
477 Ga0373939_0000097
478 Ga0373960_0004610
479 Ga0373931_0000147
480 Ga0373931_0011003
481 Ga0373931_0073840
482 Ga0373927_0001115
483 Ga0373947_0176747
484 Ga0373937_0363477
485 Ga0373925_0001344
486 Ga0395900_0000133
487 Ga0395900_0121743
488 Ga0395898_0000337
489 Ga0395898_0056178
490 Ga0395898_0499156
491 Ga0395905_0005678
492 Ga0395905_0018901
493 Ga0395905_0088116
494 Ga0395901_0001499
495 Ga0395901_0003981
496 Ga0395901_0154083
497 Ga0436365_1189087
498 Ga0436360_0145313
499 Ga0436361_0062839
500 Ga0436361_0264198
501 Ga0436361_0284474
502 Ga0451791_0578246
503 Ga0451807_0131389
504 Ga0439449_0002394
505 Ga0439451_027359
506 Ga0439464_0017232
507 Ga0466969_0000005
508 Ga0466969_0022808
509 Ga0466972_0008271
510 Ga0466972_0013182
511 Ga0466966_0004806
512 Ga0466966_0012632
513 Ga0466961_0039598
514 Ga0466961_0146663
515 Ga0466963_0005093
516 Ga0466964_0006859
517 Ga0466970_0026945
518 Ga0466957_0088770
519 Ga0466959_0004475
520 Ga0466959_0112530
521 Ga0451576_0158599
522 Ga0466958_0014932
523 Ga0466967_0018022
524 Ga0495590_0016805
525 Ga0495585_0032245
526 Ga0495583_0007625
527 Ga0495606_0002299
528 Ga0495630_0105090
529 Ga0495631_0100039
530 Ga0495632_0038178
531 Ga0495643_0002396
532 Ga0495642_0021489
533 Ga0495621_0012589
534 Ga0495597_0000435
535 Ga0495656_0004769
536 Ga0495668_0037542
537 Ga0495668_0038099
538 Ga0495588_0083090
539 Ga0495649_0000832
540 Ga0495649_0033997
541 Ga0495589_0012620
542 Ga0495660_0074104
543 Ga0495687_003254
544 Ga0495687_011539
545 Ga0495687_019818
546 Ga0495687_083729
547 Ga0495686_0001681
548 Ga0495686_0052979
549 Ga0496103_0039285
550 Ga0496104_0035824
551 Ga0496107_0040283
552 Ga0496108_0085614
553 Ga0496109_0034033
554 Ga0496110_0017385
555 Ga0496110_0080400
556 Ga0496113_0215189
557 Ga0496115_0048792
558 Ga0496122_0052369
559 Ga0496125_0005304
560 Ga0496126_0192334
561 Ga0501033_0022231
562 Ga0501034_0186373
563 Ga0501043_0022663
564 Ga0501047_0044958
565 Ga0501069_0031600
566 Ga0501070_0000931
567 Ga0501074_0018272
568 Ga0501080_0001450
569 Ga0501035_0000690
570 Ga0501035_0123661
571 Ga0501044_0002922
572 Ga0501044_0131707
573 nmdc:mga03683_16241_c1
574 nmdc:mga00v17_72454_c1
575 nmdc:mga0k408_171075_c1
576 nmdc:mga0k408_17782_c1
577 nmdc:mga0k408_22397_c1
578 nmdc:mga0k408_32893_c1
579 nmdc:mga0k408_43089_c1
580 nmdc:mga0k408_74164_c1
581 nmdc:mga06z11_14844_c1
582 nmdc:mga07m45_17915_c1
583 nmdc:mga07m45_17929_c1
584 nmdc:mga07m45_37216_c1
585 nmdc:mga07m45_52444_c1
586 nmdc:mga07m45_56489_c1
587 Ga0500610_0020779
588 Ga0500644_0028907
589 Ga0500593_009512
590 Ga0500568_0051715
591 Ga0500587_009810
592 Ga0466962_0028011
593 2644071160
594 2644220214
595 2644261257
596 2722885169
597 2738885401
598 2739248432
599 2776271455
600 2776280035
601 2839143855
602 2881102903
603 2887380734
604 2894654394
605 2919707456
606 2928117901

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02653

BPD_transp_2

Branched-chain amino acid transport system / permease component

58

340

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1l7v-assembly1.cif.gz_B bacterial abc transporter involved in b12 uptake 0.5387 15 338
7kyp-assembly4.cif.gz_N psabc from streptococcus pneumoniae in complex with fab 0.5329 49 339
2nq2-assembly1.cif.gz_A an inward-facing conformation of a putative metal-chelate type abc transporter. 0.5242 16 338
1l7v-assembly1.cif.gz_B bacterial abc transporter involved in b12 uptake 0.5205 15 338
2nq2-assembly1.cif.gz_A an inward-facing conformation of a putative metal-chelate type abc transporter. 0.515 16 338
ID Description Score Start End Superfamily
af_P32720_52_318_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.8021 59 336 1.10.3470.10
af_P32720_52_318_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7937 59 336 1.10.3470.10
af_P0AE26_50_315_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.778 59 336 1.10.3470.10
af_P0AGI1_45_314_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7712 59 336 1.10.3470.10
af_P0AE26_50_315_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7705 59 336 1.10.3470.10
ID Description Score Start End GO Terms
AF-A0A519G8P5-F1-model_v4 deleted 0.9516 1 351
AF-A0A531KCQ0-F1-model_v4 ABC transporter permease 0.9509 68 213 GO:0005886
GO:0022857
AF-A0A257P6S9-F1-model_v4 Sugar ABC transporter permease 0.944 21 351 GO:0005886
GO:0022857
AF-A0A519G8P5-F1-model_v4 deleted 0.9437 1 351
AF-A0A257P6S9-F1-model_v4 Sugar ABC transporter permease 0.9357 21 351 GO:0005886
GO:0022857

Map