F397176

General Info

Members Datasets Scaffolds Average Seq Length
303 191 606 391

Family's Representative Sequence

Representative Sequence 3300042010|Ga0439452_000248|Ga0439452_000248_13180_14538
Length 452
Sequence MLAYAPLLFTVPNIGCARCLAPNNTTVFSHAPRFHGACAGVRPMQRVRPLRITLQGLLTMTNTPHDDTGPRAYWSGVLAMTLCAFALVASEFMPVSLLTPVSRDLGVSEGLAGQGIAISGALAVLTSLFLSRLAGNLNRKALLLGLTLLMALSGVIIALAPDYRTYMAGRALIGVAIGGFWSLSAATAIRLVPRHQVPRALAIFNGGNALATVIAAPLGSWLGAVIGWRGAFFCLAPVALIAFIWQWRSLPAMPAQGHKAHPGRTLRQPLVIAGMAACGIFFMGQFALFTYVRPFLETVTRVNVSTLSLILLAIGAAGFSGTLLIGGALRSGFYRTLIAIPFLMAVIAVALTGVGHNLSLVAALLCGWGLIATAAPVGWWTWVARTLPDNAEAGGGLMVAVVQLSIALGSTLGGFAFDHSGWRSAFFLSAGLLLLAALLAAITSKQDAHPDI

Samples

Sample ID Description Type Environment
1 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
5 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
14 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
15 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
16 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
17 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
18 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
21 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
22 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
25 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
26 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
27 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
30 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
31 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
32 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
33 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
34 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
35 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
36 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
37 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
50 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
51 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
52 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
53 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
54 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
55 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
56 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
57 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
58 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
59 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
60 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
61 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
62 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
63 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
66 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
67 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
68 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
69 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
70 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
71 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
72 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
73 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
74 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
75 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
76 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
77 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
78 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
79 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
80 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
81 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
82 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
83 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
84 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
85 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
86 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
87 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
88 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
89 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
90 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
91 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
92 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
93 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
94 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
95 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
96 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
97 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
98 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
99 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
100 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
101 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
102 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
103 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
104 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
105 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
106 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
107 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
108 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
109 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
110 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
111 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
112 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
113 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
114 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
115 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
116 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
117 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
118 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
119 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
122 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
123 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
124 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
125 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
126 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
127 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
128 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
129 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
130 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
131 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
134 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
135 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
136 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
137 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
138 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
139 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
140 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
141 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
142 2547132374 Acidovorax radicis N35 Isolate Unclassified
143 2554235132 Pseudomonas aeruginosa PGPR2 Isolate Unclassified
144 2600254954 Pseudomonas sp. NFACC19-2 Isolate Rhizoplane
145 2600255256 Enterobacter sp. NFIX08 Isolate Rhizoplane
146 2600255257 Enterobacter sp. NFIX03 Isolate Rhizoplane
147 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
148 2600255310 Enterobacter sp. NFIX06 Isolate Rhizoplane
149 2600255311 Enterobacter sp. NFIX04 Isolate Rhizoplane
150 2602042046 Enterobacter sp. NFIX09 Isolate Rhizoplane
151 2643221559 Lysobacter sp. Root559 Isolate Unclassified
152 2643221569 Achromobacter sp. Root565 Isolate Unclassified
153 2643221570 Acidovorax sp. Root568 Isolate Unclassified
154 2643221609 Acidovorax sp. Root217 Isolate Unclassified
155 2643221611 Acidovorax sp. Root219 Isolate Unclassified
156 2643221612 Lysobacter sp. Root76 Isolate Unclassified
157 2643221652 Acidovorax sp. Root402 Isolate Unclassified
158 2643221664 Massilia sp. Root418 Isolate Unclassified
159 2643221695 Lysobacter sp. Root494 Isolate Unclassified
160 2643221717 Acidovorax sp. Root267 Isolate Unclassified
161 2643221727 Lysobacter sp. Root96 Isolate Unclassified
162 2765235841 Pseudomonas putida AA7 Isolate Unclassified
163 2811995292 Kosakonia oryzae Ola 51 Isolate Unclassified
164 2814123068 Kosakonia radicincitans GXGL-4A Isolate Rhizosphere
165 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
166 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
167 2842747753 Variovorax sp. R-72060 Isolate Unclassified
168 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
169 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
170 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
171 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
172 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
173 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
174 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
175 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
176 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
177 2908669403 Pantoea coffeiphila 1480 Isolate Rhizosphere
178 2916178963 Pseudoalteromonas rhizosphaerae RA15 Isolate Rhizosphere
179 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
180 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
181 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
182 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
183 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
184 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
185 2969079654 Klebsiella variicola E57-7 Isolate Unclassified
186 3007511990 Pseudomonas fluorescens G20-18 Isolate Rhizosphere
187 3007872151 Pseudomonas sp. SWRI51 Isolate Rhizosphere
188 642555113 Paraburkholderia phytofirmans PsJN Isolate Unclassified
189 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule
190 8055092621 Silvania confinis H4N4 Isolate Rhizosphere
191 8056125926 Pseudomonas azerbaijanorientalis SWRI123 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.17
Metatranscriptomes 0
Isolates 16.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.92
Nodule 1.32
Rhizoplane 2.64
Rhizosphere 67
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439452_000248 3300042010 Bacteria 37260
2 JGI25152J39213_1000045 3300002773 Bacteria 86127
3 JGI25153J46596_10000389 3300003215 Bacteria 29812
4 Ga0055524_1005180 3300003775 Bacteria 5871
5 Ga0058692_1000093 3300003856 Bacteria 60434
6 Ga0065714_10004221 3300005288 Bacteria 9317
7 Ga0070660_100012255 3300005339 Bacteria 6118
8 Ga0070714_100000789 3300005435 Bacteria 22463
9 Ga0070710_10028218 3300005437 Bacteria 3000
10 Ga0068855_100082557 3300005563 Bacteria 3724
11 Ga0068854_100000898 3300005578 Bacteria 17895
12 Ga0068856_100117026 3300005614 Bacteria 2666
13 Ga0081539_10029783 3300005985 Bacteria 3402
14 Ga0075364_10004797 3300006051 Bacteria 7825
15 Ga0075370_10000160 3300006353 Bacteria 22943
16 Ga0105251_10001073 3300009011 Bacteria 23899
17 Ga0105251_10001514 3300009011 Bacteria 19969
18 Ga0105244_10000691 3300009036 Bacteria 29301
19 Ga0105244_10003843 3300009036 Bacteria 10583
20 Ga0105250_10000863 3300009092 Bacteria 17876
21 Ga0105250_10005193 3300009092 Bacteria 5873
22 Ga0105240_10051889 3300009093 Bacteria 5158
23 Ga0105243_10033246 3300009148 Bacteria 3988
24 Ga0105237_10007288 3300009545 Bacteria 12129
25 Ga0105237_10033642 3300009545 Bacteria 5194
26 Ga0105238_10000031 3300009551 Bacteria 179497
27 Ga0105239_10003958 3300010375 Bacteria 17952
28 Ga0157373_10017243 3300013100 Bacteria 5259
29 Ga0157371_10000092 3300013102 Bacteria 141282
30 Ga0157371_10001916 3300013102 Bacteria 20794
31 Ga0157370_10059884 3300013104 Bacteria 3617
32 Ga0157369_10050305 3300013105 Bacteria 4514
33 Ga0157372_10040648 3300013307 Bacteria 5137
34 Ga0157372_10123914 3300013307 Bacteria 2971
35 Ga0182008_10015372 3300014497 Bacteria 3994
36 Ga0182006_1000014 3300015261 Bacteria 340159
37 Ga0182006_1000642 3300015261 Bacteria 24783
38 Ga0182006_1000832 3300015261 Bacteria 20700
39 Ga0182006_1016251 3300015261 Bacteria 3176
40 Ga0182005_1000014 3300015265 Bacteria 389763
41 Ga0163161_10000162 3300017792 Bacteria 61742
42 Ga0163161_10016305 3300017792 Bacteria 5186
43 Ga0163161_10028560 3300017792 Bacteria 3962
44 Ga0207425_1002275 3300025245 Bacteria 6917
45 Ga0209129_1000068 3300025258 Bacteria 217385
46 Ga0209129_1008506 3300025258 Bacteria 2846
47 Ga0209025_1000045 3300025294 Bacteria 349118
48 Ga0209025_1005083 3300025294 Bacteria 10947
49 Ga0209025_1019320 3300025294 Bacteria 3794
50 Ga0209758_1000522 3300025297 Bacteria 61516
51 Ga0209256_1000501 3300025299 Bacteria 57500
52 Ga0209051_1003102 3300025303 Bacteria 11205
53 Ga0209051_1007945 3300025303 Bacteria 5709
54 Ga0209051_1008282 3300025303 Bacteria 5524
55 Ga0207696_1000795 3300025711 Bacteria 20520
56 Ga0207655_1000981 3300025728 Bacteria 29300
57 Ga0207655_1021993 3300025728 Bacteria 3214
58 Ga0207713_1001555 3300025735 Bacteria 18061
59 Ga0207713_1002050 3300025735 Bacteria 15083
60 Ga0207695_10000480 3300025913 Bacteria 85456
61 Ga0207671_10002653 3300025914 Bacteria 18790
62 Ga0207657_10041838 3300025919 Bacteria 4048
63 Ga0207694_10000062 3300025924 Bacteria 140156
64 Ga0207664_10000573 3300025929 Bacteria 25811
65 Ga0207667_10181766 3300025949 Bacteria 2159
66 Ga0207640_10199549 3300025981 Bacteria 1515
67 Ga0209371_1000002 3300027312 Bacteria 1551985
68 Ga0268256_1000002 3300030500 Bacteria 1535763
69 Ga0307408_100091765 3300031548 Bacteria 2294
70 Ga0307413_10110530 3300031824 Bacteria 1839
71 Ga0307414_10005019 3300032004 Bacteria 7245
72 Ga0307411_10014777 3300032005 Bacteria 4358
73 Ga0395905_0164914 3300037471 Bacteria 2082
74 Ga0395901_0296800 3300038443 Bacteria 1676
75 Ga0439438_000001 3300041405 Bacteria 1263568
76 Ga0439438_000378 3300041405 Bacteria 19992
77 Ga0439447_006939 3300041407 Bacteria 3631
78 Ga0439466_0001065 3300041411 Bacteria 10597
79 Ga0439466_0057699 3300041411 Bacteria 1257
80 Ga0439442_010501 3300042002 Bacteria 1878
81 Ga0450920_006457 3300042122 Bacteria 2110
82 Ga0451577_0020163 3300042876 Bacteria 6122
83 Ga0453683_0021901 3300044673 Bacteria 4077
84 Ga0453684_0011110 3300044712 Bacteria 15192
85 Ga0495617_000587 3300046452 Bacteria 18541
86 Ga0495617_004350 3300046452 Bacteria 5163
87 Ga0495617_011233 3300046452 Bacteria 3056
88 Ga0495627_006652 3300046453 Bacteria 4506
89 Ga0495590_0004518 3300046457 Bacteria 5607
90 Ga0495591_008511 3300046458 Bacteria 4195
91 Ga0495591_017364 3300046458 Bacteria 2473
92 Ga0495591_024547 3300046458 Bacteria 1908
93 Ga0495629_0029641 3300046459 Bacteria 3879
94 Ga0495638_0000863 3300046460 Bacteria 31475
95 Ga0495638_0001927 3300046460 Bacteria 17854
96 Ga0495638_0001955 3300046460 Bacteria 17648
97 Ga0495638_0004223 3300046460 Bacteria 10932
98 Ga0495638_0029862 3300046460 Bacteria 3514
99 Ga0495650_0000026 3300046471 Bacteria 476029
100 Ga0495650_0052180 3300046471 Bacteria 1679
101 Ga0495605_0001897 3300046474 Bacteria 13344
102 Ga0495639_0001327 3300046475 Bacteria 11113
103 Ga0495584_0008680 3300046491 Bacteria 5257
104 Ga0495584_0061518 3300046491 Bacteria 1887
105 Ga0495584_0093101 3300046491 Bacteria 1520
106 Ga0495594_0002061 3300046499 Bacteria 10468
107 Ga0495607_0003067 3300046501 Bacteria 12990
108 Ga0495607_0027589 3300046501 Bacteria 3508
109 Ga0495607_0034689 3300046501 Bacteria 3059
110 Ga0495607_0045906 3300046501 Bacteria 2567
111 Ga0495607_0048931 3300046501 Bacteria 2469
112 Ga0495583_0000035 3300046506 Bacteria 246849
113 Ga0495583_0001833 3300046506 Bacteria 19816
114 Ga0495606_0000062 3300046507 Bacteria 184841
115 Ga0495606_0001196 3300046507 Bacteria 36498
116 Ga0495606_0001897 3300046507 Bacteria 26096
117 Ga0495610_0000181 3300046512 Bacteria 70215
118 Ga0495610_0013084 3300046512 Bacteria 4948
119 Ga0495616_0010532 3300046513 Bacteria 5349
120 Ga0495616_0016320 3300046513 Bacteria 4114
121 Ga0495616_0027758 3300046513 Bacteria 3001
122 Ga0495620_0008144 3300046515 Bacteria 5640
123 Ga0495628_0055487 3300046516 Bacteria 3121
124 Ga0495631_0000115 3300046518 Bacteria 53939
125 Ga0495631_0041605 3300046518 Bacteria 2033
126 Ga0495632_0007917 3300046519 Bacteria 6607
127 Ga0495637_0007594 3300046520 Bacteria 5366
128 Ga0495637_0007638 3300046520 Bacteria 5349
129 Ga0495637_0047067 3300046520 Bacteria 1822
130 Ga0495643_0017192 3300046522 Bacteria 4232
131 Ga0495643_0041037 3300046522 Bacteria 2525
132 Ga0495644_0000352 3300046523 Bacteria 20839
133 Ga0495644_0001071 3300046523 Bacteria 11373
134 Ga0495644_0019638 3300046523 Bacteria 2580
135 Ga0495648_0000400 3300046524 Bacteria 47684
136 Ga0495648_0000625 3300046524 Bacteria 37878
137 Ga0495648_0010166 3300046524 Bacteria 7196
138 Ga0495663_0000295 3300046525 Bacteria 18906
139 Ga0495666_0004900 3300046526 Bacteria 6770
140 Ga0495666_0056187 3300046526 Bacteria 1885
141 Ga0495654_0000838 3300046530 Bacteria 23320
142 Ga0495654_0012427 3300046530 Bacteria 4573
143 Ga0495587_0005482 3300046536 Bacteria 8272
144 Ga0495609_0004081 3300046538 Bacteria 8133
145 Ga0495609_0007892 3300046538 Bacteria 5260
146 Ga0495597_0000562 3300046542 Bacteria 30814
147 Ga0495633_0001449 3300046558 Bacteria 18433
148 Ga0495633_0012816 3300046558 Bacteria 4442
149 Ga0495656_0000686 3300046615 Bacteria 10912
150 Ga0495668_0000091 3300046616 Bacteria 144428
151 Ga0495668_0007331 3300046616 Bacteria 7070
152 Ga0495611_0002413 3300046648 Bacteria 8568
153 Ga0495611_0005012 3300046648 Bacteria 5675
154 Ga0495625_0005496 3300046660 Bacteria 11530
155 Ga0495625_0022961 3300046660 Bacteria 4772
156 Ga0495659_0000793 3300046664 Bacteria 11330
157 Ga0495661_0000184 3300046665 Bacteria 71844
158 Ga0495588_0031400 3300046674 Bacteria 2673
159 Ga0495646_0000759 3300046680 Bacteria 17995
160 Ga0495670_0004125 3300046691 Bacteria 7122
161 Ga0495670_0037643 3300046691 Bacteria 2411
162 Ga0495670_0079634 3300046691 Bacteria 1668
163 Ga0495671_0000009 3300046692 Bacteria 369875
164 Ga0495671_0005566 3300046692 Bacteria 7360
165 Ga0495671_0010740 3300046692 Bacteria 5063
166 Ga0495671_0013540 3300046692 Bacteria 4410
167 Ga0495649_0000876 3300046694 Bacteria 24155
168 Ga0495649_0010196 3300046694 Bacteria 5552
169 Ga0495649_0013285 3300046694 Bacteria 4755
170 Ga0495660_0000148 3300046810 Bacteria 76297
171 Ga0495660_0000753 3300046810 Bacteria 24442
172 Ga0495660_0034511 3300046810 Bacteria 2831
173 Ga0495581_0013444 3300047315 Bacteria 4747
174 Ga0495636_0000433 3300047318 Bacteria 15533
175 Ga0495672_0000001 3300047320 Bacteria 1458820
176 Ga0495672_0001020 3300047320 Bacteria 28796
177 Ga0495672_0025108 3300047320 Bacteria 3822
178 Ga0495672_0072873 3300047320 Bacteria 1938
179 Ga0495680_0000029 3300047322 Bacteria 112033
180 Ga0495683_0000973 3300047323 Bacteria 20021
181 Ga0495683_0001490 3300047323 Bacteria 15265
182 Ga0495683_0003661 3300047323 Bacteria 8899
183 Ga0495687_001891 3300047443 Bacteria 18036
184 Ga0495675_0007764 3300047444 Bacteria 6619
185 Ga0495679_000864 3300047446 Bacteria 19167
186 Ga0495673_0000258 3300047469 Bacteria 73887
187 Ga0495673_0000266 3300047469 Bacteria 72495
188 Ga0495673_0000786 3300047469 Bacteria 29910
189 Ga0495673_0008431 3300047469 Bacteria 5805
190 Ga0495681_0000565 3300047470 Bacteria 28317
191 Ga0495681_0015113 3300047470 Bacteria 4381
192 Ga0495681_0022118 3300047470 Bacteria 3410
193 Ga0495686_0000941 3300047472 Bacteria 36162
194 Ga0495686_0011593 3300047472 Bacteria 6207
195 Ga0495626_0000464 3300048091 Bacteria 41332
196 Ga0495626_0001686 3300048091 Bacteria 17020
197 Ga0495626_0008725 3300048091 Bacteria 5522
198 Ga0496104_0179980 3300048907 Bacteria 2024
199 Ga0496116_0000503 3300048919 Bacteria 53433
200 Ga0496116_0000723 3300048919 Bacteria 42265
201 Ga0496116_0008786 3300048919 Bacteria 8715
202 Ga0496117_0000001 3300048920 Bacteria 2526244
203 Ga0496117_0000301 3300048920 Bacteria 86865
204 Ga0496117_0001249 3300048920 Bacteria 37873
205 Ga0496117_0010141 3300048920 Bacteria 8648
206 Ga0496118_0000008 3300048921 Bacteria 644537
207 Ga0496118_0000048 3300048921 Bacteria 253404
208 Ga0496118_0002695 3300048921 Bacteria 23396
209 Ga0496118_0006539 3300048921 Bacteria 12751
210 Ga0496118_0094869 3300048921 Bacteria 2039
211 Ga0496121_0001199 3300048924 Bacteria 45399
212 Ga0496121_0006988 3300048924 Bacteria 13727
213 Ga0496121_0089365 3300048924 Bacteria 2412
214 Ga0496122_0000086 3300048925 Bacteria 207993
215 Ga0496122_0000224 3300048925 Bacteria 126514
216 Ga0496122_0003357 3300048925 Bacteria 21098
217 Ga0496122_0005255 3300048925 Bacteria 15519
218 Ga0496122_0011568 3300048925 Bacteria 8911
219 Ga0496122_0078621 3300048925 Bacteria 2310
220 Ga0496123_0000021 3300048926 Bacteria 378760
221 Ga0496123_0002074 3300048926 Bacteria 25807
222 Ga0496123_0003551 3300048926 Bacteria 17303
223 Ga0496123_0010518 3300048926 Bacteria 8162
224 Ga0496124_0000123 3300048927 Bacteria 161106
225 Ga0496124_0000710 3300048927 Bacteria 54498
226 Ga0496124_0002968 3300048927 Bacteria 21272
227 Ga0496124_0097079 3300048927 Bacteria 2393
228 Ga0496124_0097189 3300048927 Bacteria 2391
229 Ga0496124_0103427 3300048927 Bacteria 2304
230 Ga0496125_0000414 3300048928 Bacteria 79745
231 Ga0496125_0006665 3300048928 Bacteria 12431
232 Ga0496125_0013595 3300048928 Bacteria 7993
233 Ga0496125_0123510 3300048928 Bacteria 1840
234 Ga0496126_0001246 3300048929 Bacteria 41326
235 Ga0496126_0017541 3300048929 Bacteria 7130
236 Ga0496126_0158933 3300048929 Bacteria 1932
237 Ga0495678_000837 3300049459 Bacteria 27507
238 Ga0495678_001021 3300049459 Bacteria 23817
239 Ga0495678_001608 3300049459 Bacteria 17288
240 Ga0495678_002535 3300049459 Bacteria 12271
241 Ga0495682_0000001 3300049460 Bacteria 1559116
242 Ga0495682_0000228 3300049460 Bacteria 44109
243 Ga0495682_0029826 3300049460 Bacteria 2020
244 Ga0501034_0000331 3300049571 Bacteria 82931
245 nmdc:mga00v17_60_c1 3300050491 Bacteria 67387
246 nmdc:mga0k408_185442_c1 3300050493 Bacteria 1241
247 nmdc:mga07m45_97967_c1 3300050496 Bacteria 1683
248 Ga0500621_000002 3300053126 Bacteria 849473
249 Ga0500652_000110 3300053131 Bacteria 32301
250 Ga0500658_0000025 3300053134 Bacteria 113309
251 Ga0500634_0026635 3300053161 Bacteria 3149
252 Ga0500645_001145 3300053730 Bacteria 14366
253 2513953537 2513237150 Bacteria 6553639
254 2548498773 2547132374 Bacteria 5530232
255 2554815451 2554235132 Bacteria 6772433
256 2600444661 2600254954 Bacteria 5100516
257 2601532637 2600255256 Bacteria 5597742
258 2601538007 2600255257 Bacteria 5597196
259 2601667554 2600255292 Bacteria 6300551
260 2601756337 2600255310 Bacteria 5600903
261 2601763182 2600255311 Bacteria 5598766
262 2603637907 2602042046 Bacteria 5483348
263 2643818288 2643221559 Bacteria 4424915
264 2643858947 2643221569 Bacteria 6064337
265 2643865565 2643221570 Bacteria 5103772
266 2644059061 2643221609 Bacteria 6756331
267 2644071284 2643221611 Bacteria 6820941
268 2644078866 2643221612 Bacteria 4361984
269 2644296266 2643221652 Bacteria 5140275
270 2644359000 2643221664 Bacteria 7272945
271 2644529112 2643221695 Bacteria 3441323
272 2644647785 2643221717 Bacteria 5676132
273 2644693643 2643221727 Bacteria 4415595
274 2765583973 2765235841 Bacteria 6137024
275 2813728927 2811995292 Bacteria 5303342
276 2814696469 2814123068 Bacteria 5687681
277 2819617078 2818991449 Bacteria 5518009
278 2842309139 2842304105 Bacteria 7023636
279 2842751887 2842747753 Bacteria 5578255
280 2842915751 2842914999 Bacteria 4419378
281 2844851093 2844849076 Bacteria 4091819
282 2857547172 2857542790 Bacteria 5326616
283 2904442709 2904439833 Bacteria 5931679
284 2904535081 2904530477 Bacteria 5876334
285 2904588581 2904584206 Bacteria 6028872
286 2904594345 2904589729 Bacteria 6113573
287 2904604813 2904601388 Bacteria 5884906
288 2904780187 2904776348 Bacteria 4658726
289 2908670293 2908669403 Bacteria 5740494
290 2916183658 2916178963 Bacteria 5265078
291 2919083054 2919079590 Bacteria 5946433
292 2919132111 2919130084 Bacteria 5301837
293 2919465529 2919462493 Bacteria 5817112
294 2929199150 2929195423 Bacteria 5325372
295 2933575452 2933570622 Bacteria 7023390
296 2946025721 2946024296 Bacteria 3508095
297 2969082298 2969079654 Bacteria 5439582
298 3007513922 3007511990 Bacteria 6481491
299 3007876554 3007872151 Bacteria 5268868
300 642619623 642555113 Bacteria 8214658
301 644750356 644736347 Bacteria 6476522
302 8055092679 8055092621 Bacteria 4873875
303 8056128878 8056125926 Bacteria 6228218
304 Ga0439452_000248
305 JGI25152J39213_1000045
306 JGI25153J46596_10000389
307 Ga0055524_1005180
308 Ga0058692_1000093
309 Ga0065714_10004221
310 Ga0070660_100012255
311 Ga0070714_100000789
312 Ga0070710_10028218
313 Ga0068855_100082557
314 Ga0068854_100000898
315 Ga0068856_100117026
316 Ga0081539_10029783
317 Ga0075364_10004797
318 Ga0075370_10000160
319 Ga0105251_10001073
320 Ga0105251_10001514
321 Ga0105244_10000691
322 Ga0105244_10003843
323 Ga0105250_10000863
324 Ga0105250_10005193
325 Ga0105240_10051889
326 Ga0105243_10033246
327 Ga0105237_10007288
328 Ga0105237_10033642
329 Ga0105238_10000031
330 Ga0105239_10003958
331 Ga0157373_10017243
332 Ga0157371_10000092
333 Ga0157371_10001916
334 Ga0157370_10059884
335 Ga0157369_10050305
336 Ga0157372_10040648
337 Ga0157372_10123914
338 Ga0182008_10015372
339 Ga0182006_1000014
340 Ga0182006_1000642
341 Ga0182006_1000832
342 Ga0182006_1016251
343 Ga0182005_1000014
344 Ga0163161_10000162
345 Ga0163161_10016305
346 Ga0163161_10028560
347 Ga0207425_1002275
348 Ga0209129_1000068
349 Ga0209129_1008506
350 Ga0209025_1000045
351 Ga0209025_1005083
352 Ga0209025_1019320
353 Ga0209758_1000522
354 Ga0209256_1000501
355 Ga0209051_1003102
356 Ga0209051_1007945
357 Ga0209051_1008282
358 Ga0207696_1000795
359 Ga0207655_1000981
360 Ga0207655_1021993
361 Ga0207713_1001555
362 Ga0207713_1002050
363 Ga0207695_10000480
364 Ga0207671_10002653
365 Ga0207657_10041838
366 Ga0207694_10000062
367 Ga0207664_10000573
368 Ga0207667_10181766
369 Ga0207640_10199549
370 Ga0209371_1000002
371 Ga0268256_1000002
372 Ga0307408_100091765
373 Ga0307413_10110530
374 Ga0307414_10005019
375 Ga0307411_10014777
376 Ga0395905_0164914
377 Ga0395901_0296800
378 Ga0439438_000001
379 Ga0439438_000378
380 Ga0439447_006939
381 Ga0439466_0001065
382 Ga0439466_0057699
383 Ga0439442_010501
384 Ga0450920_006457
385 Ga0451577_0020163
386 Ga0453683_0021901
387 Ga0453684_0011110
388 Ga0495617_000587
389 Ga0495617_004350
390 Ga0495617_011233
391 Ga0495627_006652
392 Ga0495590_0004518
393 Ga0495591_008511
394 Ga0495591_017364
395 Ga0495591_024547
396 Ga0495629_0029641
397 Ga0495638_0000863
398 Ga0495638_0001927
399 Ga0495638_0001955
400 Ga0495638_0004223
401 Ga0495638_0029862
402 Ga0495650_0000026
403 Ga0495650_0052180
404 Ga0495605_0001897
405 Ga0495639_0001327
406 Ga0495584_0008680
407 Ga0495584_0061518
408 Ga0495584_0093101
409 Ga0495594_0002061
410 Ga0495607_0003067
411 Ga0495607_0027589
412 Ga0495607_0034689
413 Ga0495607_0045906
414 Ga0495607_0048931
415 Ga0495583_0000035
416 Ga0495583_0001833
417 Ga0495606_0000062
418 Ga0495606_0001196
419 Ga0495606_0001897
420 Ga0495610_0000181
421 Ga0495610_0013084
422 Ga0495616_0010532
423 Ga0495616_0016320
424 Ga0495616_0027758
425 Ga0495620_0008144
426 Ga0495628_0055487
427 Ga0495631_0000115
428 Ga0495631_0041605
429 Ga0495632_0007917
430 Ga0495637_0007594
431 Ga0495637_0007638
432 Ga0495637_0047067
433 Ga0495643_0017192
434 Ga0495643_0041037
435 Ga0495644_0000352
436 Ga0495644_0001071
437 Ga0495644_0019638
438 Ga0495648_0000400
439 Ga0495648_0000625
440 Ga0495648_0010166
441 Ga0495663_0000295
442 Ga0495666_0004900
443 Ga0495666_0056187
444 Ga0495654_0000838
445 Ga0495654_0012427
446 Ga0495587_0005482
447 Ga0495609_0004081
448 Ga0495609_0007892
449 Ga0495597_0000562
450 Ga0495633_0001449
451 Ga0495633_0012816
452 Ga0495656_0000686
453 Ga0495668_0000091
454 Ga0495668_0007331
455 Ga0495611_0002413
456 Ga0495611_0005012
457 Ga0495625_0005496
458 Ga0495625_0022961
459 Ga0495659_0000793
460 Ga0495661_0000184
461 Ga0495588_0031400
462 Ga0495646_0000759
463 Ga0495670_0004125
464 Ga0495670_0037643
465 Ga0495670_0079634
466 Ga0495671_0000009
467 Ga0495671_0005566
468 Ga0495671_0010740
469 Ga0495671_0013540
470 Ga0495649_0000876
471 Ga0495649_0010196
472 Ga0495649_0013285
473 Ga0495660_0000148
474 Ga0495660_0000753
475 Ga0495660_0034511
476 Ga0495581_0013444
477 Ga0495636_0000433
478 Ga0495672_0000001
479 Ga0495672_0001020
480 Ga0495672_0025108
481 Ga0495672_0072873
482 Ga0495680_0000029
483 Ga0495683_0000973
484 Ga0495683_0001490
485 Ga0495683_0003661
486 Ga0495687_001891
487 Ga0495675_0007764
488 Ga0495679_000864
489 Ga0495673_0000258
490 Ga0495673_0000266
491 Ga0495673_0000786
492 Ga0495673_0008431
493 Ga0495681_0000565
494 Ga0495681_0015113
495 Ga0495681_0022118
496 Ga0495686_0000941
497 Ga0495686_0011593
498 Ga0495626_0000464
499 Ga0495626_0001686
500 Ga0495626_0008725
501 Ga0496104_0179980
502 Ga0496116_0000503
503 Ga0496116_0000723
504 Ga0496116_0008786
505 Ga0496117_0000001
506 Ga0496117_0000301
507 Ga0496117_0001249
508 Ga0496117_0010141
509 Ga0496118_0000008
510 Ga0496118_0000048
511 Ga0496118_0002695
512 Ga0496118_0006539
513 Ga0496118_0094869
514 Ga0496121_0001199
515 Ga0496121_0006988
516 Ga0496121_0089365
517 Ga0496122_0000086
518 Ga0496122_0000224
519 Ga0496122_0003357
520 Ga0496122_0005255
521 Ga0496122_0011568
522 Ga0496122_0078621
523 Ga0496123_0000021
524 Ga0496123_0002074
525 Ga0496123_0003551
526 Ga0496123_0010518
527 Ga0496124_0000123
528 Ga0496124_0000710
529 Ga0496124_0002968
530 Ga0496124_0097079
531 Ga0496124_0097189
532 Ga0496124_0103427
533 Ga0496125_0000414
534 Ga0496125_0006665
535 Ga0496125_0013595
536 Ga0496125_0123510
537 Ga0496126_0001246
538 Ga0496126_0017541
539 Ga0496126_0158933
540 Ga0495678_000837
541 Ga0495678_001021
542 Ga0495678_001608
543 Ga0495678_002535
544 Ga0495682_0000001
545 Ga0495682_0000228
546 Ga0495682_0029826
547 Ga0501034_0000331
548 nmdc:mga00v17_60_c1
549 nmdc:mga0k408_185442_c1
550 nmdc:mga07m45_97967_c1
551 Ga0500621_000002
552 Ga0500652_000110
553 Ga0500658_0000025
554 Ga0500634_0026635
555 Ga0500645_001145
556 2513953537
557 2548498773
558 2554815451
559 2600444661
560 2601532637
561 2601538007
562 2601667554
563 2601756337
564 2601763182
565 2603637907
566 2643818288
567 2643858947
568 2643865565
569 2644059061
570 2644071284
571 2644078866
572 2644296266
573 2644359000
574 2644529112
575 2644647785
576 2644693643
577 2765583973
578 2813728927
579 2814696469
580 2819617078
581 2842309139
582 2842751887
583 2842915751
584 2844851093
585 2857547172
586 2904442709
587 2904535081
588 2904588581
589 2904594345
590 2904604813
591 2904780187
592 2908670293
593 2916183658
594 2919083054
595 2919132111
596 2919465529
597 2929199150
598 2933575452
599 2946025721
600 2969082298
601 3007513922
602 3007876554
603 642619623
604 644750356
605 8055092679
606 8056128878

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

80

399

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
6kki-assembly1.cif.gz_A crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward-occluded conformation 0.8676 25 401
6zgr-assembly2.cif.gz_B crystal structure of a mfs transporter with bound 1-hydroxynaphthalene-2-carboxylic acid at 2.67 angstroem resolution 0.8558 24 398
6kki-assembly1.cif.gz_A crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward-occluded conformation 0.8522 25 401
6lyy-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate azd3965 in the outward-open conformation. 0.8498 28 403
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.847 26 401
ID Description Score Start End Superfamily
af_Q2FXH1_4_180_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9294 224 398 1.20.1250.20
af_P9WJX3_18_194_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9241 26 194 1.20.1250.20
af_Q5RGT2_295_489_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9199 221 398 1.20.1250.20
af_Q2G0C4_6_197_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9162 226 396 1.20.1250.20
af_P9WJX7_21_217_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9127 28 204 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A5C1W9L2-F1-model_v4 MFS transporter 0.9328 23 403 GO:0005886
GO:0022857
AF-A0A1H9J8I6-F1-model_v4 Predicted arabinose efflux permease, MFS family 0.9267 19 405 GO:0005886
GO:0022857
AF-A0A0M8U2T6-F1-model_v4 deleted 0.9231 68 400
AF-A0A520INB5-F1-model_v4 MFS transporter 0.9212 27 403 GO:0005886
GO:0022857
AF-A0A0H3CZD1-F1-model_v4 MFS transporter, arabinose efflux permease 0.9191 27 403 GO:0005886
GO:0022857

Map