F397184

General Info

Members Datasets Scaffolds Average Seq Length
303 202 606 404

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0204494|Ga0451577_0204494_319_1617
Length 432
Sequence MTRAGGAGAMNPPTPKVGAVAPLQHRLDVDAIRKDFPILAREIYGKRLAYLDNTATTQKPVQVLRAIEDFYRTNNANVHRGVYRMAEESTEKYEAARSTVARFLNARSAKEIVFTRGTTESINLVSNSWGRKNVGPGDVVVATEMEHHSNMVPWQLLAEEKGATLRYIPVDGSGRLDLSNLDAILDGPVKLLAVAHMANAIGTINPVDELIRRAHAVGAVVLIDGAQSVPHLGTDVRALDCDFLAFSGHKMLAPTGIGALYAKRDLLEAMPPFFGGGEMIREVTTKGSTWNDVPFKFEAGTMNIADTIAFGAAIDYVQAIGMDKIHAHGVSLAAAAMKALAEIPGVTVYGPPAPERGGIVSFTVEGIHAHDVAAVLDREGIAVRAGHHCTMPLHAKFGIAASTRASFYVYNLPEEIDRLVAGVRKAKQVFNS

Samples

Sample ID Description Type Environment
1 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
46 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
47 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
48 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
75 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
76 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
77 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
78 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
79 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
80 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
81 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
110 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
111 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
112 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
113 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
114 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
115 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
116 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
117 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
118 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
119 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
120 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
121 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
122 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
123 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
124 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
125 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
126 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
127 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
128 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
129 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
130 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
131 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
132 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
133 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
134 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
137 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
138 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
139 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
140 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
141 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
142 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
143 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
144 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
145 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
146 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
147 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
150 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
151 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
152 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
153 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
156 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
157 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
158 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
159 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
169 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
170 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
172 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
173 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
174 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
175 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
176 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
177 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
178 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
179 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
180 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
181 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
182 3300059478 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 58R_AW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
183 3300059490 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 7R_CD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
184 3300059491 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 12R_AW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
185 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
186 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
187 3300059509 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 54R_CD_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
188 3300059510 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 55R_CD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
189 3300059512 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 57R_AW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
190 3300059624 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 146R_CW_T3_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
191 3300059626 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 173R_CD_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
192 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
193 3300059642 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 10R_AW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
194 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
195 2718217752 Candidatus Xiphinematobacter sp. Idaho Grape Isolate Unclassified
196 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
197 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
198 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
199 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
200 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
201 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
202 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.74
Metatranscriptomes 4.62
Isolates 2.64

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.96
Nodule 0.33
Rhizoplane 3.63
Rhizosphere 87.46
Stem 0
Stem Tuber 0
Unclassified 1.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451577_0204494 3300042876 Bacteria 1782
2 JGI25151J46595_10007340 3300003187 Bacteria 5416
3 JGI25406J46586_10013552 3300003203 Bacteria 3496
4 rootH2_10070396 3300003320 Bacteria 9968
5 rootH1_10033717 3300003323 Bacteria 7735
6 Ga0065707_10011052 3300005295 Bacteria 3918
7 Ga0065707_10081719 3300005295 Bacteria 66042
8 Ga0070683_100022987 3300005329 Bacteria 5574
9 Ga0070683_100158398 3300005329 Bacteria 2148
10 Ga0070666_10005349 3300005335 Bacteria 7871
11 Ga0070680_100010388 3300005336 Bacteria 7177
12 Ga0070680_100017610 3300005336 Bacteria 5635
13 Ga0070680_100052652 3300005336 Bacteria 3322
14 Ga0070680_100202358 3300005336 Bacteria 1675
15 Ga0070682_100071556 3300005337 Bacteria 2220
16 Ga0068868_100051168 3300005338 Bacteria 3247
17 Ga0070661_100000155 3300005344 Bacteria 56344
18 Ga0070671_100069825 3300005355 Bacteria 2930
19 Ga0070667_100078164 3300005367 Bacteria 2826
20 Ga0070713_100043569 3300005436 Bacteria 3669
21 Ga0070710_10015423 3300005437 Bacteria 3868
22 Ga0070711_100000863 3300005439 Bacteria 15939
23 Ga0070711_100003187 3300005439 Bacteria 9522
24 Ga0070705_100002610 3300005440 Bacteria 9030
25 Ga0070694_100050580 3300005444 Bacteria 2802
26 Ga0070678_100027473 3300005456 Bacteria 3864
27 Ga0070681_10001176 3300005458 Bacteria 22633
28 Ga0070681_10030784 3300005458 Bacteria 5386
29 Ga0070681_10032074 3300005458 Bacteria 5273
30 Ga0070681_10035252 3300005458 Bacteria 5026
31 Ga0070681_10048386 3300005458 Bacteria 4249
32 Ga0070681_10100889 3300005458 Bacteria 2832
33 Ga0070681_10109022 3300005458 Bacteria 2709
34 Ga0070681_10146016 3300005458 Bacteria 2294
35 Ga0068867_100001975 3300005459 Bacteria 14301
36 Ga0070706_100008994 3300005467 Bacteria 9299
37 Ga0070707_100064768 3300005468 Bacteria 3510
38 Ga0070698_100015931 3300005471 Bacteria 7939
39 Ga0070698_100020737 3300005471 Bacteria 6888
40 Ga0070699_100002784 3300005518 Bacteria 15592
41 Ga0070679_100001010 3300005530 Bacteria 24545
42 Ga0070679_100063699 3300005530 Bacteria 3675
43 Ga0070679_100089262 3300005530 Bacteria 3070
44 Ga0070672_100034624 3300005543 Bacteria 3834
45 Ga0070686_100100982 3300005544 Bacteria 1949
46 Ga0070695_100019067 3300005545 Bacteria 4171
47 Ga0070696_100003286 3300005546 Bacteria 10793
48 Ga0070696_100129195 3300005546 Bacteria 1837
49 Ga0070693_100091455 3300005547 Bacteria 1835
50 Ga0070665_100001170 3300005548 Bacteria 32187
51 Ga0070665_100004552 3300005548 Bacteria 14531
52 Ga0070665_100027057 3300005548 Bacteria 5776
53 Ga0070665_100030339 3300005548 Bacteria 5442
54 Ga0070665_100109920 3300005548 Bacteria 2759
55 Ga0070665_100242876 3300005548 Bacteria 1801
56 Ga0068855_100000938 3300005563 Bacteria 36318
57 Ga0068855_100003091 3300005563 Bacteria 20379
58 Ga0068855_100052235 3300005563 Bacteria 4812
59 Ga0068855_100148848 3300005563 Bacteria 2663
60 Ga0068856_100008903 3300005614 Bacteria 9764
61 Ga0068852_100185285 3300005616 Bacteria 1960
62 Ga0068859_100000879 3300005617 Bacteria 30647
63 Ga0068859_100047348 3300005617 Bacteria 4320
64 Ga0068863_100090923 3300005841 Bacteria 2894
65 Ga0068858_100000605 3300005842 Bacteria 37465
66 Ga0068858_100002827 3300005842 Bacteria 17443
67 Ga0068858_100023461 3300005842 Bacteria 5746
68 Ga0068860_100001307 3300005843 Bacteria 27083
69 Ga0068860_100016246 3300005843 Bacteria 7257
70 Ga0068862_100067243 3300005844 Bacteria 3089
71 Ga0081455_10000043 3300005937 Bacteria 132283
72 Ga0081455_10007291 3300005937 Bacteria 11670
73 Ga0081539_10000046 3300005985 Bacteria 275677
74 Ga0070717_10002566 3300006028 Bacteria 12810
75 Ga0075365_10049077 3300006038 Bacteria 2780
76 Ga0075363_100013773 3300006048 Bacteria 3934
77 Ga0070716_100048262 3300006173 Bacteria 2406
78 Ga0070712_100010853 3300006175 Bacteria 5761
79 Ga0097621_100012516 3300006237 Bacteria 6294
80 Ga0068871_100117693 3300006358 Bacteria 2241
81 Ga0075433_10223112 3300006852 Archaea 1674
82 Ga0075434_100001986 3300006871 Bacteria 17749
83 Ga0075436_100005197 3300006914 Bacteria 8960
84 Ga0097620_100000879 3300006931 Bacteria 30647
85 Ga0097620_100047348 3300006931 Bacteria 4320
86 Ga0075435_100000289 3300007076 Bacteria 31160
87 Ga0105240_10003890 3300009093 Bacteria 23061
88 Ga0105240_10010497 3300009093 Bacteria 13020
89 Ga0105240_10012720 3300009093 Bacteria 11600
90 Ga0105240_10032513 3300009093 Bacteria 6754
91 Ga0105240_10090162 3300009093 Bacteria 3748
92 Ga0105240_10195270 3300009093 Bacteria 2377
93 Ga0105240_10244272 3300009093 Bacteria 2080
94 Ga0105245_10029049 3300009098 Bacteria 4882
95 Ga0105245_10212910 3300009098 Bacteria 1861
96 Ga0105247_10001482 3300009101 Bacteria 16878
97 Ga0105247_10007060 3300009101 Bacteria 6907
98 Ga0105247_10061149 3300009101 Bacteria 2335
99 Ga0105243_10001824 3300009148 Bacteria 18224
100 Ga0105242_10002115 3300009176 Bacteria 15662
101 Ga0105248_10005273 3300009177 Bacteria 14224
102 Ga0105248_10024570 3300009177 Bacteria 6700
103 Ga0105248_10087140 3300009177 Bacteria 3514
104 Ga0105237_10058308 3300009545 Bacteria 3864
105 Ga0105237_10204961 3300009545 Bacteria 1972
106 Ga0105238_10012968 3300009551 Bacteria 8414
107 Ga0105238_10034479 3300009551 Bacteria 5150
108 Ga0105249_10067185 3300009553 Bacteria 3302
109 Ga0105249_10309114 3300009553 Bacteria 1588
110 Ga0105249_10363846 3300009553 Bacteria 1469
111 Ga0105239_10007804 3300010375 Bacteria 12242
112 Ga0105239_10287579 3300010375 Bacteria 1851
113 Ga0157370_10093578 3300013104 Bacteria 2820
114 Ga0157369_10005109 3300013105 Bacteria 15362
115 Ga0157369_10019273 3300013105 Bacteria 7632
116 Ga0157369_10042121 3300013105 Bacteria 4982
117 Ga0157374_10045663 3300013296 Bacteria 4055
118 Ga0157374_10112045 3300013296 Bacteria 2625
119 Ga0163162_10035528 3300013306 Bacteria 4964
120 Ga0163162_10038219 3300013306 Bacteria 4790
121 Ga0157375_10075499 3300013308 Bacteria 3395
122 Ga0163163_10101667 3300014325 Bacteria 2897
123 Ga0157379_10035741 3300014968 Bacteria 4430
124 Ga0157379_10146585 3300014968 Bacteria 2129
125 Ga0157376_10041961 3300014969 Bacteria 3748
126 Ga0182007_10014354 3300015262 Bacteria 2990
127 Ga0213876_10039362 3300021384 Bacteria 2497
128 Ga0224712_10015484 3300022467 Bacteria 2482
129 Ga0224712_10032284 3300022467 Bacteria 1907
130 Ga0209436_100350 3300025208 Bacteria 20823
131 Ga0209130_1004105 3300025284 Bacteria 5733
132 Ga0209025_1002902 3300025294 Bacteria 17115
133 Ga0207426_1000114 3300025302 Bacteria 228273
134 Ga0207656_10057830 3300025321 Bacteria 1692
135 Ga0207653_10010223 3300025885 Bacteria 2927
136 Ga0207692_10061842 3300025898 Bacteria 1942
137 Ga0207710_10000406 3300025900 Bacteria 28648
138 Ga0207710_10029999 3300025900 Bacteria 2370
139 Ga0207680_10022659 3300025903 Bacteria 3419
140 Ga0207680_10160389 3300025903 Bacteria 1507
141 Ga0207684_10031461 3300025910 Bacteria 4514
142 Ga0207707_10000560 3300025912 Bacteria 37696
143 Ga0207707_10010731 3300025912 Bacteria 7960
144 Ga0207707_10088074 3300025912 Bacteria 2712
145 Ga0207707_10089947 3300025912 Bacteria 2683
146 Ga0207695_10021422 3300025913 Bacteria 7373
147 Ga0207695_10030146 3300025913 Bacteria 5976
148 Ga0207695_10037702 3300025913 Bacteria 5214
149 Ga0207695_10075435 3300025913 Bacteria 3431
150 Ga0207695_10100844 3300025913 Bacteria 2882
151 Ga0207695_10173442 3300025913 Bacteria 2080
152 Ga0207695_10226115 3300025913 Bacteria 1777
153 Ga0207693_10000490 3300025915 Bacteria 35741
154 Ga0207663_10000311 3300025916 Bacteria 21215
155 Ga0207660_10001954 3300025917 Bacteria 13746
156 Ga0207660_10007435 3300025917 Bacteria 7088
157 Ga0207660_10055890 3300025917 Bacteria 2822
158 Ga0207652_10038114 3300025921 Bacteria 4072
159 Ga0207652_10050236 3300025921 Bacteria 3572
160 Ga0207652_10050790 3300025921 Bacteria 3553
161 Ga0207694_10072163 3300025924 Bacteria 2699
162 Ga0207700_10012813 3300025928 Bacteria 5423
163 Ga0207644_10000879 3300025931 Bacteria 18950
164 Ga0207709_10001248 3300025935 Bacteria 18270
165 Ga0207711_10009990 3300025941 Bacteria 7886
166 Ga0207711_10035105 3300025941 Bacteria 4249
167 Ga0207667_10041639 3300025949 Bacteria 4884
168 Ga0207667_10127768 3300025949 Bacteria 2618
169 Ga0207712_10188305 3300025961 Bacteria 1627
170 Ga0207658_10002301 3300025986 Bacteria 14098
171 Ga0207658_10012187 3300025986 Bacteria 5866
172 Ga0207658_10041550 3300025986 Bacteria 3330
173 Ga0207677_10034073 3300026023 Bacteria 3294
174 Ga0207703_10001200 3300026035 Bacteria 24281
175 Ga0207641_10000078 3300026088 Bacteria 143842
176 Ga0207648_10028172 3300026089 Bacteria 4982
177 Ga0207683_10020295 3300026121 Bacteria 5682
178 Ga0268266_10000944 3300028379 Bacteria 37085
179 Ga0268266_10002450 3300028379 Bacteria 19896
180 Ga0268266_10026244 3300028379 Bacteria 4957
181 Ga0268266_10188417 3300028379 Bacteria 1882
182 Ga0268265_10005388 3300028380 Bacteria 8760
183 Ga0268264_10000142 3300028381 Bacteria 170046
184 Ga0265331_10006288 3300031250 Bacteria 7039
185 Ga0316579_10007181 3300031691 Bacteria 4588
186 Ga0316577_10039608 3300031733 Bacteria 2636
187 Ga0307416_100054591 3300032002 Bacteria 3213
188 Ga0373936_0010421 3300035113 Bacteria 3507
189 Ga0373955_0056568 3300035172 Bacteria 2152
190 Ga0316574_0002161 3300035398 Bacteria 9747
191 Ga0373935_0033277 3300035692 Bacteria 3207
192 Ga0373927_0009292 3300035695 Bacteria 6594
193 Ga0373937_0004877 3300036401 Bacteria 11406
194 Ga0316584_0018892 3300036712 Bacteria 4978
195 Ga0395898_0128967 3300037466 Bacteria 2423
196 Ga0395898_0144599 3300037466 Bacteria 2276
197 Ga0395898_0162506 3300037466 Bacteria 2136
198 Ga0436364_0744429 3300037853 Bacteria 8139
199 Ga0436365_0072488 3300039437 Bacteria 1570
200 Ga0436360_0188235 3300039438 Bacteria 1844
201 Ga0436360_0867688 3300039438 Bacteria 2248
202 Ga0436361_0725574 3300039447 Bacteria 1621
203 Ga0436361_1199084 3300039447 Bacteria 1293
204 Ga0436362_0535653 3300039453 Bacteria 2975
205 Ga0451577_0000991 3300042876 Bacteria 41360
206 Ga0466969_0001000 3300044656 Bacteria 15292
207 Ga0466969_0007147 3300044656 Bacteria 5945
208 Ga0453683_0001561 3300044673 Bacteria 19443
209 Ga0453683_0011137 3300044673 Bacteria 5944
210 Ga0466961_0007940 3300044693 Bacteria 6761
211 Ga0466964_0000201 3300044706 Bacteria 16769
212 Ga0453684_0000008 3300044712 Bacteria 1200052
213 Ga0453684_0000009 3300044712 Bacteria 1139914
214 Ga0453684_0000280 3300044712 Bacteria 219955
215 Ga0453684_0005054 3300044712 Bacteria 26727
216 Ga0453684_0179243 3300044712 Bacteria 2489
217 Ga0453684_0299052 3300044712 Unclassified 1830
218 Ga0466971_0000493 3300044719 Bacteria 15500
219 Ga0466970_0001870 3300044765 Bacteria 10177
220 Ga0466957_0002612 3300044842 Bacteria 9710
221 Ga0466959_0000647 3300045049 Bacteria 20303
222 Ga0466959_0000784 3300045049 Bacteria 18638
223 Ga0466959_0014424 3300045049 Bacteria 5741
224 Ga0466959_0043469 3300045049 Bacteria 3312
225 Ga0466959_0063005 3300045049 Bacteria 2694
226 Ga0451576_0010436 3300045051 Bacteria 10654
227 Ga0451576_0014828 3300045051 Bacteria 8662
228 Ga0451576_0051235 3300045051 Bacteria 4328
229 Ga0495638_0002415 3300046460 Bacteria 15262
230 Ga0495580_0025318 3300046472 Bacteria 4337
231 Ga0495632_0058368 3300046519 Bacteria 1881
232 Ga0495587_0100372 3300046536 Bacteria 1668
233 Ga0495622_0016624 3300046557 Bacteria 3427
234 Ga0495659_0001712 3300046664 Bacteria 7325
235 Ga0495623_0024829 3300046679 Bacteria 3861
236 Ga0495658_0058347 3300046683 Bacteria 2208
237 Ga0495602_0061956 3300048088 Bacteria 3248
238 Ga0496102_0019402 3300048905 Bacteria 5989
239 Ga0496103_0048380 3300048906 Bacteria 2628
240 Ga0496105_0231783 3300048908 Bacteria 1500
241 Ga0496106_0079132 3300048909 Bacteria 2523
242 Ga0496107_0129408 3300048910 Bacteria 1863
243 Ga0496108_0015543 3300048911 Bacteria 6208
244 Ga0496109_0016256 3300048912 Bacteria 6505
245 Ga0496110_0053351 3300048913 Bacteria 3554
246 Ga0496113_0065599 3300048916 Bacteria 2748
247 Ga0496114_0113829 3300048917 Bacteria 2319
248 Ga0496115_0052366 3300048918 Bacteria 3274
249 Ga0496121_0001468 3300048924 Bacteria 39712
250 Ga0496125_0000762 3300048928 Bacteria 52740
251 Ga0496125_0011233 3300048928 Bacteria 8976
252 Ga0496126_0001892 3300048929 Bacteria 30204
253 Ga0501031_0048868 3300049568 Bacteria 2756
254 Ga0501032_0000983 3300049569 Bacteria 23010
255 Ga0501033_0002917 3300049570 Bacteria 14306
256 Ga0501033_0221075 3300049570 Bacteria 1348
257 Ga0501034_0148698 3300049571 Bacteria 2318
258 Ga0501034_0246494 3300049571 Bacteria 1732
259 Ga0501036_0000717 3300049572 Bacteria 24527
260 Ga0501037_0000632 3300049573 Bacteria 27245
261 Ga0501037_0072312 3300049573 Bacteria 2508
262 Ga0501038_0004830 3300049574 Bacteria 12518
263 Ga0501046_0001482 3300049580 Bacteria 22481
264 Ga0501046_0054014 3300049580 Bacteria 3162
265 Ga0501047_0003316 3300049581 Bacteria 15251
266 Ga0501075_0334085 3300049591 Bacteria 1155
267 Ga0501259_000492 3300049688 Bacteria 6329
268 Ga0501035_0006221 3300049822 Bacteria 11231
269 Ga0501044_0008025 3300049823 Bacteria 11600
270 Ga0501044_0308837 3300049823 Bacteria 1509
271 nmdc:mga0yw44_111790_c1 3300050492 Bacteria 1751
272 nmdc:mga0n895_20_c1 3300050512 Bacteria 94193
273 nmdc:mga0n895_3989_c1 3300050512 Archaea 11999
274 nmdc:mga0rr50_304_c1 3300050513 Bacteria 26740
275 nmdc:mga08x19_1127_c1 3300050514 Bacteria 16646
276 nmdc:mga0a205_10920_c1 3300050515 Bacteria 7163
277 nmdc:mga0a205_626_c1 3300050515 Bacteria 28071
278 Ga0495619_0075941 3300053085 Bacteria 2255
279 Ga0500556_0001692 3300053104 Bacteria 8434
280 Ga0500608_002822 3300053122 Bacteria 6412
281 Ga0500616_0000130 3300053153 Bacteria 132948
282 Ga0500622_0003682 3300053156 Bacteria 10060
283 Ga0587093_000063 3300059478 Archaea 4730
284 Ga0587066_000085 3300059490 Archaea 5074
285 Ga0587070_002652 3300059491 Unclassified 2058
286 Ga0587073_0003613 3300059492 Unclassified 2139
287 Ga0587077_000152 3300059493 Archaea 4517
288 Ga0587089_006299 3300059509 Archaea 1373
289 Ga0587090_001140 3300059510 Unclassified 2595
290 Ga0587092_003473 3300059512 Archaea 1794
291 Ga0587109_010260 3300059624 Archaea 1491
292 Ga0587115_000413 3300059626 Archaea 3081
293 Ga0587067_000409 3300059640 Archaea 3690
294 Ga0587069_000387 3300059642 Bacteria 3220
295 Ga0466962_0000251 3300061719 Bacteria 22568
296 2718716368 2718217752 Bacteria 915884
297 2739205142 2738543005 Bacteria 5278128
298 2819681605 2818991460 Bacteria 7595395
299 2842137976 2842134933 Bacteria 5847019
300 2928144543 2928142448 Bacteria 5288925
301 2929181493 2929177148 Bacteria 7883697
302 2945983905 2945977869 Bacteria 7777518
303 2946016702 2946013367 Bacteria 7766675
304 Ga0451577_0204494
305 JGI25151J46595_10007340
306 JGI25406J46586_10013552
307 rootH2_10070396
308 rootH1_10033717
309 Ga0065707_10011052
310 Ga0065707_10081719
311 Ga0070683_100022987
312 Ga0070683_100158398
313 Ga0070666_10005349
314 Ga0070680_100010388
315 Ga0070680_100017610
316 Ga0070680_100052652
317 Ga0070680_100202358
318 Ga0070682_100071556
319 Ga0068868_100051168
320 Ga0070661_100000155
321 Ga0070671_100069825
322 Ga0070667_100078164
323 Ga0070713_100043569
324 Ga0070710_10015423
325 Ga0070711_100000863
326 Ga0070711_100003187
327 Ga0070705_100002610
328 Ga0070694_100050580
329 Ga0070678_100027473
330 Ga0070681_10001176
331 Ga0070681_10030784
332 Ga0070681_10032074
333 Ga0070681_10035252
334 Ga0070681_10048386
335 Ga0070681_10100889
336 Ga0070681_10109022
337 Ga0070681_10146016
338 Ga0068867_100001975
339 Ga0070706_100008994
340 Ga0070707_100064768
341 Ga0070698_100015931
342 Ga0070698_100020737
343 Ga0070699_100002784
344 Ga0070679_100001010
345 Ga0070679_100063699
346 Ga0070679_100089262
347 Ga0070672_100034624
348 Ga0070686_100100982
349 Ga0070695_100019067
350 Ga0070696_100003286
351 Ga0070696_100129195
352 Ga0070693_100091455
353 Ga0070665_100001170
354 Ga0070665_100004552
355 Ga0070665_100027057
356 Ga0070665_100030339
357 Ga0070665_100109920
358 Ga0070665_100242876
359 Ga0068855_100000938
360 Ga0068855_100003091
361 Ga0068855_100052235
362 Ga0068855_100148848
363 Ga0068856_100008903
364 Ga0068852_100185285
365 Ga0068859_100000879
366 Ga0068859_100047348
367 Ga0068863_100090923
368 Ga0068858_100000605
369 Ga0068858_100002827
370 Ga0068858_100023461
371 Ga0068860_100001307
372 Ga0068860_100016246
373 Ga0068862_100067243
374 Ga0081455_10000043
375 Ga0081455_10007291
376 Ga0081539_10000046
377 Ga0070717_10002566
378 Ga0075365_10049077
379 Ga0075363_100013773
380 Ga0070716_100048262
381 Ga0070712_100010853
382 Ga0097621_100012516
383 Ga0068871_100117693
384 Ga0075433_10223112
385 Ga0075434_100001986
386 Ga0075436_100005197
387 Ga0097620_100000879
388 Ga0097620_100047348
389 Ga0075435_100000289
390 Ga0105240_10003890
391 Ga0105240_10010497
392 Ga0105240_10012720
393 Ga0105240_10032513
394 Ga0105240_10090162
395 Ga0105240_10195270
396 Ga0105240_10244272
397 Ga0105245_10029049
398 Ga0105245_10212910
399 Ga0105247_10001482
400 Ga0105247_10007060
401 Ga0105247_10061149
402 Ga0105243_10001824
403 Ga0105242_10002115
404 Ga0105248_10005273
405 Ga0105248_10024570
406 Ga0105248_10087140
407 Ga0105237_10058308
408 Ga0105237_10204961
409 Ga0105238_10012968
410 Ga0105238_10034479
411 Ga0105249_10067185
412 Ga0105249_10309114
413 Ga0105249_10363846
414 Ga0105239_10007804
415 Ga0105239_10287579
416 Ga0157370_10093578
417 Ga0157369_10005109
418 Ga0157369_10019273
419 Ga0157369_10042121
420 Ga0157374_10045663
421 Ga0157374_10112045
422 Ga0163162_10035528
423 Ga0163162_10038219
424 Ga0157375_10075499
425 Ga0163163_10101667
426 Ga0157379_10035741
427 Ga0157379_10146585
428 Ga0157376_10041961
429 Ga0182007_10014354
430 Ga0213876_10039362
431 Ga0224712_10015484
432 Ga0224712_10032284
433 Ga0209436_100350
434 Ga0209130_1004105
435 Ga0209025_1002902
436 Ga0207426_1000114
437 Ga0207656_10057830
438 Ga0207653_10010223
439 Ga0207692_10061842
440 Ga0207710_10000406
441 Ga0207710_10029999
442 Ga0207680_10022659
443 Ga0207680_10160389
444 Ga0207684_10031461
445 Ga0207707_10000560
446 Ga0207707_10010731
447 Ga0207707_10088074
448 Ga0207707_10089947
449 Ga0207695_10021422
450 Ga0207695_10030146
451 Ga0207695_10037702
452 Ga0207695_10075435
453 Ga0207695_10100844
454 Ga0207695_10173442
455 Ga0207695_10226115
456 Ga0207693_10000490
457 Ga0207663_10000311
458 Ga0207660_10001954
459 Ga0207660_10007435
460 Ga0207660_10055890
461 Ga0207652_10038114
462 Ga0207652_10050236
463 Ga0207652_10050790
464 Ga0207694_10072163
465 Ga0207700_10012813
466 Ga0207644_10000879
467 Ga0207709_10001248
468 Ga0207711_10009990
469 Ga0207711_10035105
470 Ga0207667_10041639
471 Ga0207667_10127768
472 Ga0207712_10188305
473 Ga0207658_10002301
474 Ga0207658_10012187
475 Ga0207658_10041550
476 Ga0207677_10034073
477 Ga0207703_10001200
478 Ga0207641_10000078
479 Ga0207648_10028172
480 Ga0207683_10020295
481 Ga0268266_10000944
482 Ga0268266_10002450
483 Ga0268266_10026244
484 Ga0268266_10188417
485 Ga0268265_10005388
486 Ga0268264_10000142
487 Ga0265331_10006288
488 Ga0316579_10007181
489 Ga0316577_10039608
490 Ga0307416_100054591
491 Ga0373936_0010421
492 Ga0373955_0056568
493 Ga0316574_0002161
494 Ga0373935_0033277
495 Ga0373927_0009292
496 Ga0373937_0004877
497 Ga0316584_0018892
498 Ga0395898_0128967
499 Ga0395898_0144599
500 Ga0395898_0162506
501 Ga0436364_0744429
502 Ga0436365_0072488
503 Ga0436360_0188235
504 Ga0436360_0867688
505 Ga0436361_0725574
506 Ga0436361_1199084
507 Ga0436362_0535653
508 Ga0451577_0000991
509 Ga0466969_0001000
510 Ga0466969_0007147
511 Ga0453683_0001561
512 Ga0453683_0011137
513 Ga0466961_0007940
514 Ga0466964_0000201
515 Ga0453684_0000008
516 Ga0453684_0000009
517 Ga0453684_0000280
518 Ga0453684_0005054
519 Ga0453684_0179243
520 Ga0453684_0299052
521 Ga0466971_0000493
522 Ga0466970_0001870
523 Ga0466957_0002612
524 Ga0466959_0000647
525 Ga0466959_0000784
526 Ga0466959_0014424
527 Ga0466959_0043469
528 Ga0466959_0063005
529 Ga0451576_0010436
530 Ga0451576_0014828
531 Ga0451576_0051235
532 Ga0495638_0002415
533 Ga0495580_0025318
534 Ga0495632_0058368
535 Ga0495587_0100372
536 Ga0495622_0016624
537 Ga0495659_0001712
538 Ga0495623_0024829
539 Ga0495658_0058347
540 Ga0495602_0061956
541 Ga0496102_0019402
542 Ga0496103_0048380
543 Ga0496105_0231783
544 Ga0496106_0079132
545 Ga0496107_0129408
546 Ga0496108_0015543
547 Ga0496109_0016256
548 Ga0496110_0053351
549 Ga0496113_0065599
550 Ga0496114_0113829
551 Ga0496115_0052366
552 Ga0496121_0001468
553 Ga0496125_0000762
554 Ga0496125_0011233
555 Ga0496126_0001892
556 Ga0501031_0048868
557 Ga0501032_0000983
558 Ga0501033_0002917
559 Ga0501033_0221075
560 Ga0501034_0148698
561 Ga0501034_0246494
562 Ga0501036_0000717
563 Ga0501037_0000632
564 Ga0501037_0072312
565 Ga0501038_0004830
566 Ga0501046_0001482
567 Ga0501046_0054014
568 Ga0501047_0003316
569 Ga0501075_0334085
570 Ga0501259_000492
571 Ga0501035_0006221
572 Ga0501044_0008025
573 Ga0501044_0308837
574 nmdc:mga0yw44_111790_c1
575 nmdc:mga0n895_20_c1
576 nmdc:mga0n895_3989_c1
577 nmdc:mga0rr50_304_c1
578 nmdc:mga08x19_1127_c1
579 nmdc:mga0a205_10920_c1
580 nmdc:mga0a205_626_c1
581 Ga0495619_0075941
582 Ga0500556_0001692
583 Ga0500608_002822
584 Ga0500616_0000130
585 Ga0500622_0003682
586 Ga0587093_000063
587 Ga0587066_000085
588 Ga0587070_002652
589 Ga0587073_0003613
590 Ga0587077_000152
591 Ga0587089_006299
592 Ga0587090_001140
593 Ga0587092_003473
594 Ga0587109_010260
595 Ga0587115_000413
596 Ga0587067_000409
597 Ga0587069_000387
598 Ga0466962_0000251
599 2718716368
600 2739205142
601 2819681605
602 2842137976
603 2928144543
604 2929181493
605 2945983905
606 2946016702

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00266

Aminotran_5

Aminotransferase class-V

49

419

1

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ceq-assembly1.cif.gz_A crystal structure of cysteine desulfurase sufs h121a from bacillus subtilis 0.9908 1 403
7e6c-assembly1.cif.gz_A crystal structure of l-cycloserine-bound form of cysteine desulfurase sufs c361a from bacillus subtilis 0.9906 1 403
7e6e-assembly1.cif.gz_A crystal structure of pmp-bound form of cysteine desulfurase sufs r376a from bacillus subtilis in d-cycloserine-inhibition 0.9906 1 403
5xt6-assembly1.cif.gz_A a sulfur-transferring catalytic intermediate of sufs-sufu complex from bacillus subtilis 0.9902 1 405
7cep-assembly1.cif.gz_A crystal structure of l-cycloserine-bound form of cysteine desulfurase sufs from bacillus subtilis 0.9902 1 403
ID Description Score Start End Superfamily
af_Q2FZY5_42_298_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9908 34 289 3.40.640.10
af_A0A368UH16_90_350_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9859 34 293 3.40.640.10
af_Q2FZY5_42_298_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9832 34 289 3.40.640.10
af_Q0INV6_1_200_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9809 87 285 3.40.640.10
1i29A02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9796 36 293 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A0A3XHS9-F1-model_v4 Cysteine desulfurase 0.9926 1 205
AF-A0A0M0KHD2-F1-model_v4 Cysteine desulfurase (EC 2.8.1.7) 0.9921 1 403 GO:0006534
GO:0030170
GO:0031071
AF-A0A7X0WKS2-F1-model_v4 cysteine desulfurase (EC 2.8.1.7) 0.991 1 405 GO:0006534
GO:0030170
GO:0031071
AF-A0A3S6Z5B6-F1-model_v4 deleted 0.9902 9 403
AF-A0A349K936-F1-model_v4 cysteine desulfurase (EC 2.8.1.7) 0.9894 1 284 GO:0006534
GO:0030170
GO:0031071

Map