F397516

General Info

Members Datasets Scaffolds Average Seq Length
304 222 607 305

Family's Representative Sequence

Representative Sequence 3300006846|Ga0075430_100078334|Ga0075430_1000783342
Length 347
Sequence VNGGHEATGERRCQRFQIAPRRAAHFRQALRDGARARLEVRREAVLVFSTSAYEVLGSRVRAEGRFPAGEVERKQFPDGEVYQRVVSQVAGEDVAIVGGTPSDPAVTELYDLASGLVECGARSLTMVIPYFGYSTMERAVRPGEVVTAKTRARLLSSVPSPPMGSRVALLDLHSEGIPYYFEGRVRPVHLSGRAVILRAIQDLAHGDFVLACTDAGRAKWVQNLANEAGVTASFVFKRRGAGGAPMVTAVSAQVQGQHVIIYDDMIRSGSSLLNAAEAYRKSGAQKISVVITHGVFPDDALTRLQSSGLLSTVLCTDSHPRALELEGDFLRVRSVAPVLAEFLAAPP

Samples

Sample ID Description Type Environment
1 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
6 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
7 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
8 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
9 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
10 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
15 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
19 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
20 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
21 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
22 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
23 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
24 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
25 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
28 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
29 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
30 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
31 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
34 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
72 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
73 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
76 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
77 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
78 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
79 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
82 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
83 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
84 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
108 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
109 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
110 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
111 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
112 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
113 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
114 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
115 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
116 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
117 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
118 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
119 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
122 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
123 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
124 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
125 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
126 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
127 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
128 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
129 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
130 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
131 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
132 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
133 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
134 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
135 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
136 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
137 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
138 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
139 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
140 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
141 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
142 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
143 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
144 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
145 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
146 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
147 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
148 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
149 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
150 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
151 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
152 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
153 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
154 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
155 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
156 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
157 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
158 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
159 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
160 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
161 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
162 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
163 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
164 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
165 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
166 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
170 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
171 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
172 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
173 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
174 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
175 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
176 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
177 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
178 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
182 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
183 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
184 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
185 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
186 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
187 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
188 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
189 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
190 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
191 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
192 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
193 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
194 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
195 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
196 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
197 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
198 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
199 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
200 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
201 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
202 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
203 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
204 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
205 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
206 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
207 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
208 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
209 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
210 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
211 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
212 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
213 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
214 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
215 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
216 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
217 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
218 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
219 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
220 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
221 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
222 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.41
Metatranscriptomes 0
Isolates 5.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.76
Nodule 0
Rhizoplane 0.33
Rhizosphere 69.08
Stem 0
Stem Tuber 0
Unclassified 1.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075430_100078334 3300006846 Bacteria 2771
2 JGI24739J22299_10008003 3300001989 Bacteria 3955
3 JGI24737J22298_10022589 3300001990 Bacteria 1999
4 JGI24735J21928_10000004 3300002067 Bacteria 381713
5 JGI24744J21845_10007992 3300002077 Bacteria 2184
6 JGI25162J39368_1000046 3300002737 Bacteria 169695
7 JGI25162J39368_1000462 3300002737 Bacteria 31751
8 JGI25164J39214_1002326 3300002772 Bacteria 3032
9 JGI25159J45721_1015766 3300002987 Bacteria 1642
10 JGI25165J46597_1000806 3300003214 Bacteria 23674
11 rootH1_10165154 3300003316 Bacteria 1265
12 rootH1_10165154 3300003323 Bacteria 3764
13 rootH2_10021243 3300003320 Bacteria 18569
14 rootH2_10072321 3300003320 Bacteria 15505
15 rootH2_10132853 3300003320 Bacteria 5947
16 rootL2_10001389 3300003322 Bacteria 4976
17 rootL2_10090049 3300003322 Bacteria 4716
18 rootH1_10008609 3300003323 Bacteria 127787
19 rootH1_10031264 3300003323 Bacteria 8382
20 rootH1_10056798 3300003323 Bacteria 14060
21 JGI25160J50197_1007706 3300003354 Bacteria 4185
22 Ga0055535_1001593 3300003761 Bacteria 10785
23 Ga0055531_10000005 3300003794 Bacteria 242179
24 Ga0065165_1017967 3300005262 Bacteria 2582
25 Ga0065714_10074921 3300005288 Bacteria 2918
26 Ga0065704_10074779 3300005289 Bacteria 6021
27 Ga0070683_100105210 3300005329 Bacteria 2660
28 Ga0070683_100379968 3300005329 Bacteria 1346
29 Ga0070690_100018024 3300005330 Bacteria 4257
30 Ga0068869_100058550 3300005334 Bacteria 2817
31 Ga0070689_100096345 3300005340 Bacteria 2338
32 Ga0070689_100348299 3300005340 Bacteria 1242
33 Ga0070669_100111625 3300005353 Bacteria 2075
34 Ga0070688_100043166 3300005365 Bacteria 2776
35 Ga0070667_100046092 3300005367 Bacteria 3667
36 Ga0070701_10015648 3300005438 Bacteria 3509
37 Ga0070694_100323092 3300005444 Bacteria 1188
38 Ga0070708_100031710 3300005445 Bacteria 4576
39 Ga0070678_100033493 3300005456 Bacteria 3568
40 Ga0070681_10430177 3300005458 Unclassified 1232
41 Ga0070706_100143264 3300005467 Bacteria 2231
42 Ga0070698_100015929 3300005471 Bacteria 7939
43 Ga0070679_100065107 3300005530 Bacteria 3633
44 Ga0070697_100015259 3300005536 Bacteria 6029
45 Ga0068853_100020119 3300005539 Bacteria 5548
46 Ga0070704_100140112 3300005549 Bacteria 1887
47 Ga0068855_100003427 3300005563 Bacteria 19402
48 Ga0068857_100037150 3300005577 Bacteria 4315
49 Ga0068856_100003217 3300005614 Bacteria 16630
50 Ga0068856_100378644 3300005614 Bacteria 1434
51 Ga0068859_100138467 3300005617 Bacteria 2508
52 Ga0068859_100384100 3300005617 Bacteria 1500
53 Ga0068866_10054049 3300005718 Bacteria 2056
54 Ga0068863_100060477 3300005841 Bacteria 3583
55 Ga0068858_100485791 3300005842 Bacteria 1192
56 Ga0068860_100009666 3300005843 Bacteria 9579
57 Ga0081455_10168129 3300005937 Bacteria 1673
58 Ga0070717_10093637 3300006028 Bacteria 2540
59 Ga0075366_10004336 3300006195 Bacteria 7607
60 Ga0075366_10192679 3300006195 Bacteria 1239
61 Ga0068871_100226067 3300006358 Bacteria 1623
62 Ga0075428_100117277 3300006844 Bacteria 2900
63 Ga0075431_100112508 3300006847 Bacteria 2809
64 Ga0075429_100022727 3300006880 Bacteria 5436
65 Ga0075429_100184148 3300006880 Bacteria 1830
66 Ga0075429_100202294 3300006880 Bacteria 1740
67 Ga0068865_100000070 3300006881 Bacteria 53670
68 Ga0097620_100138466 3300006931 Bacteria 2508
69 Ga0097620_100384128 3300006931 Bacteria 1500
70 Ga0075435_100184953 3300007076 Bacteria 1762
71 Ga0099794_10027621 3300007265 Bacteria 2632
72 Ga0105240_10014549 3300009093 Bacteria 10738
73 Ga0105240_10223020 3300009093 Bacteria 2195
74 Ga0105240_10228484 3300009093 Bacteria 2164
75 Ga0111539_10028256 3300009094 Bacteria 6845
76 Ga0105245_10000136 3300009098 Bacteria 69874
77 Ga0105245_10384149 3300009098 Bacteria 1399
78 Ga0105241_10136707 3300009174 Bacteria 1991
79 Ga0105242_10025525 3300009176 Bacteria 4677
80 Ga0105237_10001788 3300009545 Bacteria 27807
81 Ga0105237_10003229 3300009545 Bacteria 19506
82 Ga0105237_10049036 3300009545 Bacteria 4245
83 Ga0105238_10039813 3300009551 Bacteria 4765
84 Ga0105249_10019985 3300009553 Bacteria 5980
85 Ga0105249_10053713 3300009553 Bacteria 3683
86 Ga0105239_10000176 3300010375 Bacteria 92577
87 Ga0105239_10012139 3300010375 Bacteria 9606
88 Ga0105239_10021570 3300010375 Bacteria 7103
89 Ga0105239_10030921 3300010375 Bacteria 5890
90 Ga0105239_10134913 3300010375 Bacteria 2748
91 Ga0105239_10218909 3300010375 Bacteria 2135
92 Ga0157373_10000045 3300013100 Bacteria 112207
93 Ga0157371_10015342 3300013102 Bacteria 5750
94 Ga0157371_10062444 3300013102 Bacteria 2641
95 Ga0157370_10012722 3300013104 Bacteria 8709
96 Ga0157374_10009351 3300013296 Bacteria 8409
97 Ga0157374_10020115 3300013296 Bacteria 5918
98 Ga0157374_10109527 3300013296 Bacteria 2655
99 Ga0157374_10423024 3300013296 Bacteria 1331
100 Ga0163162_10001612 3300013306 Bacteria 21123
101 Ga0157372_10001542 3300013307 Bacteria 25080
102 Ga0157372_10004538 3300013307 Bacteria 14783
103 Ga0157375_10604544 3300013308 Bacteria 1255
104 Ga0182005_1000017 3300015265 Bacteria 331828
105 Ga0163161_10117758 3300017792 Bacteria 1993
106 Ga0213874_10035587 3300021377 Bacteria 1464
107 Ga0209436_100549 3300025208 Bacteria 16265
108 Ga0209436_104083 3300025208 Bacteria 3681
109 Ga0207427_101263 3300025231 Bacteria 9686
110 Ga0209437_100008 3300025233 Bacteria 921142
111 Ga0209437_100070 3300025233 Bacteria 306718
112 Ga0209258_100029 3300025242 Bacteria 490648
113 Ga0209148_1000089 3300025254 Bacteria 253548
114 Ga0209233_1000024 3300025261 Bacteria 695418
115 Ga0209130_1001677 3300025284 Bacteria 13496
116 Ga0207426_1000513 3300025302 Bacteria 56488
117 Ga0207426_1016907 3300025302 Bacteria 2604
118 Ga0209257_1000004 3300025304 Bacteria 1678347
119 Ga0207684_10016921 3300025910 Bacteria 6262
120 Ga0207695_10011484 3300025913 Bacteria 10720
121 Ga0207695_10042968 3300025913 Bacteria 4821
122 Ga0207695_10047862 3300025913 Bacteria 4520
123 Ga0207671_10002516 3300025914 Bacteria 19557
124 Ga0207671_10007013 3300025914 Bacteria 9873
125 Ga0207662_10170888 3300025918 Bacteria 1394
126 Ga0207652_10118159 3300025921 Bacteria 2356
127 Ga0207687_10000082 3300025927 Bacteria 69874
128 Ga0207687_10084035 3300025927 Bacteria 2307
129 Ga0207670_10034681 3300025936 Bacteria 3264
130 Ga0207670_10083096 3300025936 Bacteria 2245
131 Ga0207704_10000061 3300025938 Bacteria 76480
132 Ga0207704_10000491 3300025938 Bacteria 17631
133 Ga0207689_10064723 3300025942 Bacteria 3008
134 Ga0207689_10068507 3300025942 Bacteria 2916
135 Ga0207661_10055671 3300025944 Bacteria 3173
136 Ga0207661_10404650 3300025944 Bacteria 1238
137 Ga0207667_10009928 3300025949 Bacteria 11168
138 Ga0207667_10152820 3300025949 Bacteria 2376
139 Ga0207712_10223744 3300025961 Bacteria 1506
140 Ga0207708_10031239 3300026075 Bacteria 4042
141 Ga0207641_10006402 3300026088 Bacteria 9926
142 Ga0207676_10059162 3300026095 Bacteria 3025
143 Ga0207674_10033064 3300026116 Bacteria 5418
144 Ga0207675_100033972 3300026118 Bacteria 4753
145 Ga0207683_10001838 3300026121 Bacteria 18752
146 Ga0207683_10011334 3300026121 Bacteria 7606
147 Ga0209588_1065797 3300027671 Bacteria 1172
148 Ga0207428_10008021 3300027907 Bacteria 9582
149 Ga0268266_10065366 3300028379 Bacteria 3144
150 Ga0268264_10007742 3300028381 Bacteria 8943
151 Ga0268264_10047376 3300028381 Bacteria 3574
152 Ga0268264_10047938 3300028381 Bacteria 3553
153 Ga0307515_10004704 3300028794 Bacteria 27988
154 Ga0307515_10011928 3300028794 Bacteria 16415
155 Ga0307515_10018427 3300028794 Bacteria 12635
156 Ga0265338_10018616 3300028800 Bacteria 7421
157 Ga0265332_10005878 3300031238 Bacteria 5613
158 Ga0265340_10084087 3300031247 Unclassified 1495
159 Ga0265331_10044790 3300031250 Unclassified 2138
160 Ga0265316_10025249 3300031344 Bacteria 4962
161 Ga0307513_10380214 3300031456 Bacteria 1152
162 Ga0307509_10000035 3300031507 Bacteria 192339
163 Ga0307509_10017182 3300031507 Bacteria 8335
164 Ga0307509_10256626 3300031507 Bacteria 1527
165 Ga0307509_10314267 3300031507 Bacteria 1307
166 Ga0307508_10017271 3300031616 Bacteria 6559
167 Ga0265314_10005780 3300031711 Bacteria 11099
168 Ga0265314_10065229 3300031711 Bacteria 2460
169 Ga0307516_10020547 3300031730 Bacteria 6820
170 Ga0307405_10034080 3300031731 Bacteria 3026
171 Ga0307406_10058265 3300031901 Bacteria 2481
172 Ga0307414_10199256 3300032004 Bacteria 1627
173 Ga0307507_10186825 3300033179 Bacteria 1467
174 Ga0373949_0000158 3300035090 Bacteria 25614
175 Ga0373936_0000020 3300035113 Bacteria 142589
176 Ga0373943_0009441 3300035170 Bacteria 4373
177 Ga0373961_0000018 3300035241 Bacteria 101570
178 Ga0395905_0002995 3300037471 Bacteria 18319
179 Ga0395905_0044956 3300037471 Bacteria 4143
180 Ga0395905_0056365 3300037471 Bacteria 3677
181 Ga0395901_0041416 3300038443 Bacteria 4773
182 Ga0395901_0316030 3300038443 Bacteria 1617
183 Ga0400490_51163 3300038726 Bacteria 18819
184 Ga0436365_1461205 3300039437 Bacteria 2109
185 Ga0436365_1907311 3300039437 Bacteria 5217
186 Ga0436361_0060341 3300039447 Bacteria 2658
187 Ga0436363_0208432 3300039450 Bacteria 1656
188 Ga0436363_0754485 3300039450 Bacteria 1286
189 Ga0439431_0006514 3300041997 Bacteria 2584
190 Ga0439457_021692 3300042014 Bacteria 1424
191 Ga0451577_0001199 3300042876 Bacteria 36327
192 Ga0451577_0002930 3300042876 Bacteria 19565
193 Ga0451577_0527214 3300042876 Bacteria 1073
194 Ga0466972_0066630 3300044658 Bacteria 1721
195 Ga0453684_0005330 3300044712 Bacteria 25628
196 Ga0466968_0109691 3300044735 Bacteria 1240
197 Ga0466957_0077985 3300044842 Unclassified 2059
198 Ga0466957_0125186 3300044842 Bacteria 1642
199 Ga0466959_0064702 3300045049 Bacteria 2655
200 Ga0451576_0000003 3300045051 Bacteria 1550573
201 Ga0451576_0111665 3300045051 Bacteria 2845
202 Ga0451576_0425691 3300045051 Bacteria 1393
203 Ga0495627_012662 3300046453 Bacteria 2987
204 Ga0495629_0045367 3300046459 Bacteria 3084
205 Ga0495650_0000087 3300046471 Bacteria 234870
206 Ga0495585_0000017 3300046492 Bacteria 164054
207 Ga0495585_0000667 3300046492 Bacteria 31526
208 Ga0495583_0020473 3300046506 Bacteria 3427
209 Ga0495606_0015154 3300046507 Bacteria 5959
210 Ga0495606_0015524 3300046507 Bacteria 5862
211 Ga0495606_0019953 3300046507 Bacteria 4962
212 Ga0495610_0000762 3300046512 Bacteria 30369
213 Ga0495610_0030858 3300046512 Bacteria 2802
214 Ga0495616_0007252 3300046513 Bacteria 6639
215 Ga0495628_0236440 3300046516 Bacteria 1368
216 Ga0495648_0028260 3300046524 Bacteria 3739
217 Ga0495609_0027350 3300046538 Bacteria 2607
218 Ga0495622_0083950 3300046557 Bacteria 1465
219 Ga0495622_0130405 3300046557 Bacteria 1145
220 Ga0495633_0000025 3300046558 Bacteria 218627
221 Ga0495633_0000548 3300046558 Bacteria 37115
222 Ga0495633_0014105 3300046558 Bacteria 4189
223 Ga0495668_0000127 3300046616 Bacteria 114097
224 Ga0495625_0000008 3300046660 Bacteria 536165
225 Ga0495625_0001251 3300046660 Bacteria 32066
226 Ga0495625_0208412 3300046660 Bacteria 1286
227 Ga0495661_0015813 3300046665 Bacteria 5025
228 Ga0495661_0025628 3300046665 Bacteria 3807
229 Ga0495658_0007444 3300046683 Bacteria 5418
230 Ga0495649_0000018 3300046694 Bacteria 220586
231 Ga0495589_0128237 3300046794 Bacteria 1219
232 Ga0495687_000401 3300047443 Bacteria 53921
233 Ga0495686_0042500 3300047472 Bacteria 2890
234 Ga0495686_0069274 3300047472 Bacteria 2175
235 Ga0495614_0125043 3300048089 Bacteria 1136
236 Ga0496121_0000008 3300048924 Bacteria 843593
237 Ga0496126_0022920 3300048929 Bacteria 6063
238 Ga0495682_0069660 3300049460 Bacteria 1266
239 Ga0501034_0125795 3300049571 Bacteria 2549
240 Ga0501046_0000013 3300049580 Bacteria 303594
241 Ga0501047_0303027 3300049581 Bacteria 1440
242 Ga0501067_0090857 3300049583 Bacteria 1695
243 Ga0501070_0123248 3300049586 Bacteria 2142
244 Ga0501071_0136513 3300049587 Bacteria 1825
245 Ga0501227_000181 3300049665 Bacteria 12391
246 Ga0501227_018847 3300049665 Bacteria 1569
247 Ga0501238_008285 3300049671 Bacteria 1365
248 Ga0501221_005979 3300049704 Bacteria 2046
249 Ga0501229_004146 3300049706 Bacteria 1757
250 Ga0501083_0319690 3300049744 Bacteria 1009
251 nmdc:mga0k408_102630_c1 3300050493 Bacteria 1687
252 nmdc:mga0k408_145102_c1 3300050493 Bacteria 1413
253 nmdc:mga09592_170270_c1 3300050508 Bacteria 1883
254 nmdc:mga09592_192311_c1 3300050508 Bacteria 1766
255 nmdc:mga06r32_279015_c1 3300050510 Bacteria 1658
256 nmdc:mga08y16_110258_c1 3300050511 Bacteria 2866
257 nmdc:mga0rr50_383017_c1 3300050513 Bacteria 1186
258 Ga0500635_0003605 3300053080 Bacteria 3914
259 Ga0500643_040655 3300053087 Bacteria 1369
260 Ga0500644_0000094 3300053088 Bacteria 55669
261 Ga0500583_0058963 3300053092 Bacteria 1807
262 Ga0500566_0008102 3300053094 Bacteria 6218
263 Ga0500566_0039552 3300053094 Bacteria 2726
264 Ga0500640_000092 3300053095 Bacteria 15475
265 Ga0500554_000056 3300053102 Bacteria 19850
266 Ga0500554_051957 3300053102 Bacteria 1292
267 Ga0500572_014939 3300053111 Bacteria 1949
268 Ga0500595_000048 3300053119 Bacteria 88786
269 Ga0500597_000505 3300053120 Bacteria 8309
270 Ga0500614_000461 3300053123 Bacteria 10567
271 Ga0500614_029376 3300053123 Bacteria 1334
272 Ga0500618_000238 3300053125 Bacteria 43564
273 Ga0500642_0004394 3300053130 Bacteria 4409
274 Ga0500658_0101501 3300053134 Bacteria 1256
275 Ga0500559_0001990 3300053136 Bacteria 10990
276 Ga0500559_0007603 3300053136 Bacteria 4785
277 Ga0500568_0021873 3300053139 Bacteria 2746
278 Ga0500577_0109423 3300053142 Bacteria 1138
279 Ga0500603_009299 3300053150 Bacteria 2197
280 Ga0500616_0012949 3300053153 Bacteria 4860
281 Ga0500622_0000161 3300053156 Bacteria 70719
282 Ga0500622_0001379 3300053156 Bacteria 19568
283 Ga0500633_0001568 3300053160 Bacteria 4374
284 Ga0500633_0073807 3300053160 Bacteria 1223
285 Ga0500639_096528 3300053163 Bacteria 1463
286 Ga0500661_001244 3300055283 Bacteria 4763
287 Ga0501082_0272019 3300060353 Bacteria 1474
288 2599478180 2599185184 Bacteria 6430550
289 2819575309 2818991442 Bacteria 8318214
290 2819677302 2818991460 Bacteria 7595395
291 2821141408 2821136567 Bacteria 8080116
292 2840679142 2840677318 Bacteria 2664183
293 2884797169 2884791551 Bacteria 8511252
294 2896086953 2896085136 Bacteria 6129793
295 2896115752 2896109856 Bacteria 7140722
296 2904470987 2904467357 Bacteria 8057758
297 2919442796 2919437846 Bacteria 6199444
298 2928080772 2928078545 Bacteria 6534839
299 2928150994 2928147474 Bacteria 6512076
300 2929177291 2929177148 Bacteria 7883697
301 2929239753 2929239360 Bacteria 7745570
302 2932087657 2932082852 Bacteria 6563563
303 2945979657 2945977869 Bacteria 7777518
304 2946014475 2946013367 Bacteria 7766675
305 Ga0075430_100078334
306 JGI24739J22299_10008003
307 JGI24737J22298_10022589
308 JGI24735J21928_10000004
309 JGI24744J21845_10007992
310 JGI25162J39368_1000046
311 JGI25162J39368_1000462
312 JGI25164J39214_1002326
313 JGI25159J45721_1015766
314 JGI25165J46597_1000806
315 rootH1_10165154
316 rootH2_10021243
317 rootH2_10072321
318 rootH2_10132853
319 rootL2_10001389
320 rootL2_10090049
321 rootH1_10008609
322 rootH1_10031264
323 rootH1_10056798
324 JGI25160J50197_1007706
325 Ga0055535_1001593
326 Ga0055531_10000005
327 Ga0065165_1017967
328 Ga0065714_10074921
329 Ga0065704_10074779
330 Ga0070683_100105210
331 Ga0070683_100379968
332 Ga0070690_100018024
333 Ga0068869_100058550
334 Ga0070689_100096345
335 Ga0070689_100348299
336 Ga0070669_100111625
337 Ga0070688_100043166
338 Ga0070667_100046092
339 Ga0070701_10015648
340 Ga0070694_100323092
341 Ga0070708_100031710
342 Ga0070678_100033493
343 Ga0070681_10430177
344 Ga0070706_100143264
345 Ga0070698_100015929
346 Ga0070679_100065107
347 Ga0070697_100015259
348 Ga0068853_100020119
349 Ga0070704_100140112
350 Ga0068855_100003427
351 Ga0068857_100037150
352 Ga0068856_100003217
353 Ga0068856_100378644
354 Ga0068859_100138467
355 Ga0068859_100384100
356 Ga0068866_10054049
357 Ga0068863_100060477
358 Ga0068858_100485791
359 Ga0068860_100009666
360 Ga0081455_10168129
361 Ga0070717_10093637
362 Ga0075366_10004336
363 Ga0075366_10192679
364 Ga0068871_100226067
365 Ga0075428_100117277
366 Ga0075431_100112508
367 Ga0075429_100022727
368 Ga0075429_100184148
369 Ga0075429_100202294
370 Ga0068865_100000070
371 Ga0097620_100138466
372 Ga0097620_100384128
373 Ga0075435_100184953
374 Ga0099794_10027621
375 Ga0105240_10014549
376 Ga0105240_10223020
377 Ga0105240_10228484
378 Ga0111539_10028256
379 Ga0105245_10000136
380 Ga0105245_10384149
381 Ga0105241_10136707
382 Ga0105242_10025525
383 Ga0105237_10001788
384 Ga0105237_10003229
385 Ga0105237_10049036
386 Ga0105238_10039813
387 Ga0105249_10019985
388 Ga0105249_10053713
389 Ga0105239_10000176
390 Ga0105239_10012139
391 Ga0105239_10021570
392 Ga0105239_10030921
393 Ga0105239_10134913
394 Ga0105239_10218909
395 Ga0157373_10000045
396 Ga0157371_10015342
397 Ga0157371_10062444
398 Ga0157370_10012722
399 Ga0157374_10009351
400 Ga0157374_10020115
401 Ga0157374_10109527
402 Ga0157374_10423024
403 Ga0163162_10001612
404 Ga0157372_10001542
405 Ga0157372_10004538
406 Ga0157375_10604544
407 Ga0182005_1000017
408 Ga0163161_10117758
409 Ga0213874_10035587
410 Ga0209436_100549
411 Ga0209436_104083
412 Ga0207427_101263
413 Ga0209437_100008
414 Ga0209437_100070
415 Ga0209258_100029
416 Ga0209148_1000089
417 Ga0209233_1000024
418 Ga0209130_1001677
419 Ga0207426_1000513
420 Ga0207426_1016907
421 Ga0209257_1000004
422 Ga0207684_10016921
423 Ga0207695_10011484
424 Ga0207695_10042968
425 Ga0207695_10047862
426 Ga0207671_10002516
427 Ga0207671_10007013
428 Ga0207662_10170888
429 Ga0207652_10118159
430 Ga0207687_10000082
431 Ga0207687_10084035
432 Ga0207670_10034681
433 Ga0207670_10083096
434 Ga0207704_10000061
435 Ga0207704_10000491
436 Ga0207689_10064723
437 Ga0207689_10068507
438 Ga0207661_10055671
439 Ga0207661_10404650
440 Ga0207667_10009928
441 Ga0207667_10152820
442 Ga0207712_10223744
443 Ga0207708_10031239
444 Ga0207641_10006402
445 Ga0207676_10059162
446 Ga0207674_10033064
447 Ga0207675_100033972
448 Ga0207683_10001838
449 Ga0207683_10011334
450 Ga0209588_1065797
451 Ga0207428_10008021
452 Ga0268266_10065366
453 Ga0268264_10007742
454 Ga0268264_10047376
455 Ga0268264_10047938
456 Ga0307515_10004704
457 Ga0307515_10011928
458 Ga0307515_10018427
459 Ga0265338_10018616
460 Ga0265332_10005878
461 Ga0265340_10084087
462 Ga0265331_10044790
463 Ga0265316_10025249
464 Ga0307513_10380214
465 Ga0307509_10000035
466 Ga0307509_10017182
467 Ga0307509_10256626
468 Ga0307509_10314267
469 Ga0307508_10017271
470 Ga0265314_10005780
471 Ga0265314_10065229
472 Ga0307516_10020547
473 Ga0307405_10034080
474 Ga0307406_10058265
475 Ga0307414_10199256
476 Ga0307507_10186825
477 Ga0373949_0000158
478 Ga0373936_0000020
479 Ga0373943_0009441
480 Ga0373961_0000018
481 Ga0395905_0002995
482 Ga0395905_0044956
483 Ga0395905_0056365
484 Ga0395901_0041416
485 Ga0395901_0316030
486 Ga0400490_51163
487 Ga0436365_1461205
488 Ga0436365_1907311
489 Ga0436361_0060341
490 Ga0436363_0208432
491 Ga0436363_0754485
492 Ga0439431_0006514
493 Ga0439457_021692
494 Ga0451577_0001199
495 Ga0451577_0002930
496 Ga0451577_0527214
497 Ga0466972_0066630
498 Ga0453684_0005330
499 Ga0466968_0109691
500 Ga0466957_0077985
501 Ga0466957_0125186
502 Ga0466959_0064702
503 Ga0451576_0000003
504 Ga0451576_0111665
505 Ga0451576_0425691
506 Ga0495627_012662
507 Ga0495629_0045367
508 Ga0495650_0000087
509 Ga0495585_0000017
510 Ga0495585_0000667
511 Ga0495583_0020473
512 Ga0495606_0015154
513 Ga0495606_0015524
514 Ga0495606_0019953
515 Ga0495610_0000762
516 Ga0495610_0030858
517 Ga0495616_0007252
518 Ga0495628_0236440
519 Ga0495648_0028260
520 Ga0495609_0027350
521 Ga0495622_0083950
522 Ga0495622_0130405
523 Ga0495633_0000025
524 Ga0495633_0000548
525 Ga0495633_0014105
526 Ga0495668_0000127
527 Ga0495625_0000008
528 Ga0495625_0001251
529 Ga0495625_0208412
530 Ga0495661_0015813
531 Ga0495661_0025628
532 Ga0495658_0007444
533 Ga0495649_0000018
534 Ga0495589_0128237
535 Ga0495687_000401
536 Ga0495686_0042500
537 Ga0495686_0069274
538 Ga0495614_0125043
539 Ga0496121_0000008
540 Ga0496126_0022920
541 Ga0495682_0069660
542 Ga0501034_0125795
543 Ga0501046_0000013
544 Ga0501047_0303027
545 Ga0501067_0090857
546 Ga0501070_0123248
547 Ga0501071_0136513
548 Ga0501227_000181
549 Ga0501227_018847
550 Ga0501238_008285
551 Ga0501221_005979
552 Ga0501229_004146
553 Ga0501083_0319690
554 nmdc:mga0k408_102630_c1
555 nmdc:mga0k408_145102_c1
556 nmdc:mga09592_170270_c1
557 nmdc:mga09592_192311_c1
558 nmdc:mga06r32_279015_c1
559 nmdc:mga08y16_110258_c1
560 nmdc:mga0rr50_383017_c1
561 Ga0500635_0003605
562 Ga0500643_040655
563 Ga0500644_0000094
564 Ga0500583_0058963
565 Ga0500566_0008102
566 Ga0500566_0039552
567 Ga0500640_000092
568 Ga0500554_000056
569 Ga0500554_051957
570 Ga0500572_014939
571 Ga0500595_000048
572 Ga0500597_000505
573 Ga0500614_000461
574 Ga0500614_029376
575 Ga0500618_000238
576 Ga0500642_0004394
577 Ga0500658_0101501
578 Ga0500559_0001990
579 Ga0500559_0007603
580 Ga0500568_0021873
581 Ga0500577_0109423
582 Ga0500603_009299
583 Ga0500616_0012949
584 Ga0500622_0000161
585 Ga0500622_0001379
586 Ga0500633_0001568
587 Ga0500633_0073807
588 Ga0500639_096528
589 Ga0500661_001244
590 Ga0501082_0272019
591 2599478180
592 2819575309
593 2819677302
594 2821141408
595 2840679142
596 2884797169
597 2896086953
598 2896115752
599 2904470987
600 2919442796
601 2928080772
602 2928150994
603 2929177291
604 2929239753
605 2932087657
606 2945979657
607 2946014475

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13793

Pribosyltran_N

N-terminal domain of ribose phosphate pyrophosphokinase

45

158

0.96

PF00156

Pribosyltran

Phosphoribosyl transferase domain

192

315

0.84

PF14572

Pribosyl_synth

Phosphoribosyl synthetase-associated domain

213

343

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
7pn0-assembly1.cif.gz_A crystal structure of the phosphorybosylpyrophosphate synthetase ii from thermus thermophilus at r32 space group 0.9164 1 299
1dku-assembly1.cif.gz_A crystal structures of bacillus subtilis phosphoribosylpyrophosphate synthetase: molecular basis of allosteric inhibition and activation. 0.9159 3 299
3dah-assembly1.cif.gz_B 2.3 a crystal structure of ribose-phosphate pyrophosphokinase from burkholderia pseudomallei 0.9108 3 299
6asv-assembly1.cif.gz_A e. coli prpp synthetase 0.9102 2 299
7xmu-assembly1.cif.gz_A e.coli phosphoribosylpyrophosphate (prpp) synthetase type a filament bound with adp, pi and r5p 0.9097 3 299
ID Description Score Start End Superfamily
af_P87171_178_299_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9269 157 276 3.40.50.2020
af_Q75JN8_207_322_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.924 206 298 3.40.50.2020
af_P87171_221_328_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9149 196 298 3.40.50.2020
af_P9WKE3_154_314_3.40.1010.20 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.9127 151 298 3.40.1010.20
af_I1KY16_9_167_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9092 1 154 3.40.50.2020
ID Description Score Start End GO Terms
AF-A0A4Q3CNJ1-F1-model_v4 ribose-phosphate diphosphokinase (EC 2.7.6.1) 0.9849 1 299 GO:0000287
GO:0002189
GO:0004749
GO:0005737
GO:0006015
GO:0006164
GO:0016301
AF-A0A4Q3CNJ1-F1-model_v4 ribose-phosphate diphosphokinase (EC 2.7.6.1) 0.9752 1 299 GO:0000287
GO:0002189
GO:0004749
GO:0005737
GO:0006015
GO:0006164
GO:0016301
AF-A0A4R7CT18-F1-model_v4 deleted 0.9734 2 298
AF-A0A4R7CT18-F1-model_v4 deleted 0.9607 2 298
AF-W4MC72-F1-model_v4 ribose-phosphate diphosphokinase (EC 2.7.6.1) 0.9486 2 299 GO:0000287
GO:0002189
GO:0004749
GO:0005737
GO:0006015
GO:0006164
GO:0016301

Map