F397571

General Info

Members Datasets Scaffolds Average Seq Length
304 205 608 358

Family's Representative Sequence

Representative Sequence 3300010159|Ga0099796_10026208|Ga0099796_100262082
Length 422
Sequence MAMSTARRSTRPGKSAPPTENARERILLTAYDLFARHGIRAVGVDRIVAESGVAKTTLYRHFASKDDLVVAALELREGLIGGCALDARGSPLPPETIETCKSADAVLLGAVGGPRWDNPDAILRPEQGLLGLRKELQVYANLRPVTVHPSLAAASPLRAERLEGVDLLFVRELTGGMYFGDKRREKVPGGERAVDECVYTTVEIERVTRVAAQLARARRRKLTSVDKANVLETSRLWRSTVTRVLRDEFPDVAIDHLLVDACAMQLLRDPRSFDVIVTENMFGDILTDEASMLAGSLGVLPSASLGDDTAAASGKREASIGPVGNGERPRVRRGLYEPIHGSAPDIAGRGIANPIGTILSVAMMLRHSFGLEQEARAVEQAVSETIEEGRVTVDITPTGARSYSTVDVGSAIVAALSNAVSA

Samples

Sample ID Description Type Environment
1 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
2 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
62 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
63 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
64 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
66 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
68 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
69 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
102 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
103 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
104 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
105 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
106 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
107 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
108 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
109 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
110 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
111 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
112 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
113 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
114 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
115 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
116 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
117 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
118 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
119 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
120 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
121 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
122 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
123 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
124 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
125 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
126 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
127 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
128 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
129 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
130 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
131 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
132 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
133 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
134 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
135 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
136 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
137 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
138 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
139 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
140 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
141 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
142 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
143 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
144 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
145 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
146 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
147 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
148 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
149 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
150 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
151 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
152 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
153 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
154 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
155 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
156 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
157 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
158 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
159 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
160 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
161 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
162 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
163 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
164 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
165 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
166 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
167 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
168 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
169 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
170 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
171 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
172 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
173 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
174 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
175 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
176 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
177 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
178 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
179 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
180 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
181 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
182 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
183 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
184 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
185 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
186 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
187 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
188 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
189 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
190 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
191 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
192 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
193 2593339238 Luteibacter sp. UNCMF366Tsu5.1 Isolate Unclassified
194 2593339239 Luteibacter sp. UNCMF331Sha3.1 Isolate Unclassified
195 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
196 2734482264 Dyella sp. AD052 Isolate Unclassified
197 2738543009 Luteibacter sp. OK325 Isolate Unclassified
198 2818991440 Luteibacter yeojuensis 583 Isolate Unclassified
199 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
200 2842918807 Luteibacter sp. R-73110 Isolate Unclassified
201 2884338543 Luteibacter pinisoli MAH-14 Isolate Rhizosphere
202 2904463128 Luteibacter yeojuensis 3191 Isolate Unclassified
203 2919404418 Luteibacter sp. 3190 Isolate Unclassified
204 2941471342 Luteibacter sp. 621 Isolate Unclassified
205 2953994433 Luteibacter sp. W1I16 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.07
Metatranscriptomes 0.66
Isolates 4.28

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.96
Nodule 0
Rhizoplane 1.64
Rhizosphere 83.88
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0099796_10026208 3300010159 Bacteria 1849
2 JGI24738J21930_10000352 3300002075 Bacteria 12725
3 Ga0006562J51391_1031759 3300003578 Bacteria 11570
4 Ga0006562J51391_1031763 3300003578 Bacteria 7920
5 Ga0055535_1000117 3300003761 Bacteria 85705
6 Ga0070658_10019418 3300005327 Bacteria 5443
7 Ga0070658_10037969 3300005327 Bacteria 3884
8 Ga0070683_100011390 3300005329 Bacteria 7687
9 Ga0070683_100164525 3300005329 Bacteria 2105
10 Ga0070683_100447251 3300005329 Bacteria 1233
11 Ga0070670_100084385 3300005331 Bacteria 2729
12 Ga0070670_100122507 3300005331 Bacteria 2243
13 Ga0070666_10000079 3300005335 Bacteria 69879
14 Ga0070680_100029014 3300005336 Bacteria 4442
15 Ga0070682_100001541 3300005337 Bacteria 12926
16 Ga0068868_100230498 3300005338 Bacteria 1554
17 Ga0070661_100002731 3300005344 Bacteria 12091
18 Ga0070661_100029740 3300005344 Bacteria 3944
19 Ga0070668_100100268 3300005347 Bacteria 2294
20 Ga0070667_100015909 3300005367 Bacteria 6224
21 Ga0070701_10014842 3300005438 Bacteria 3581
22 Ga0070708_100000280 3300005445 Bacteria 38345
23 Ga0070708_100151130 3300005445 Bacteria 2159
24 Ga0070678_100233465 3300005456 Bacteria 1535
25 Ga0070681_10006156 3300005458 Bacteria 11656
26 Ga0070681_10029428 3300005458 Bacteria 5516
27 Ga0070681_10055462 3300005458 Bacteria 3945
28 Ga0070681_10068581 3300005458 Bacteria 3513
29 Ga0068867_100120482 3300005459 Bacteria 2027
30 Ga0070706_100000220 3300005467 Bacteria 69811
31 Ga0070707_100015469 3300005468 Bacteria 7159
32 Ga0070707_100066581 3300005468 Bacteria 3462
33 Ga0070698_100018552 3300005471 Bacteria 7324
34 Ga0070679_100038844 3300005530 Bacteria 4733
35 Ga0070679_100081688 3300005530 Bacteria 3221
36 Ga0070679_100138714 3300005530 Bacteria 2412
37 Ga0070684_100014236 3300005535 Bacteria 6437
38 Ga0070684_100032681 3300005535 Bacteria 4436
39 Ga0070684_100057635 3300005535 Bacteria 3392
40 Ga0070684_100085969 3300005535 Bacteria 2790
41 Ga0070697_100003133 3300005536 Bacteria 12703
42 Ga0070697_100148664 3300005536 Bacteria 1974
43 Ga0068853_100021885 3300005539 Bacteria 5333
44 Ga0068853_100050657 3300005539 Bacteria 3573
45 Ga0070672_100025984 3300005543 Bacteria 4350
46 Ga0070696_100359304 3300005546 Bacteria 1130
47 Ga0070665_100004714 3300005548 Bacteria 14209
48 Ga0068855_100091746 3300005563 Bacteria 3503
49 Ga0068855_100129410 3300005563 Bacteria 2884
50 Ga0070664_100000674 3300005564 Bacteria 26089
51 Ga0070664_100018693 3300005564 Bacteria 5699
52 Ga0068857_100001408 3300005577 Bacteria 19001
53 Ga0068857_100086338 3300005577 Bacteria 2805
54 Ga0070702_100011894 3300005615 Bacteria 4341
55 Ga0068859_100091554 3300005617 Bacteria 3092
56 Ga0068864_100010200 3300005618 Bacteria 7756
57 Ga0068860_100043115 3300005843 Bacteria 4306
58 Ga0068860_100181717 3300005843 Bacteria 2033
59 Ga0081455_10000016 3300005937 Bacteria 176679
60 Ga0097621_100007334 3300006237 Bacteria 7882
61 Ga0068871_100122816 3300006358 Bacteria 2195
62 Ga0068871_100206085 3300006358 Bacteria 1699
63 Ga0075428_100304565 3300006844 Bacteria 1713
64 Ga0075433_10059864 3300006852 Bacteria 3333
65 Ga0068865_100053428 3300006881 Bacteria 2803
66 Ga0068865_100054566 3300006881 Bacteria 2777
67 Ga0097620_100091555 3300006931 Bacteria 3092
68 Ga0105240_10002672 3300009093 Bacteria 28382
69 Ga0105240_10049639 3300009093 Bacteria 5295
70 Ga0105240_10077426 3300009093 Bacteria 4097
71 Ga0105240_10134870 3300009093 Bacteria 2957
72 Ga0105240_10616141 3300009093 Bacteria 1193
73 Ga0105245_10185056 3300009098 Bacteria 1992
74 Ga0114129_10032686 3300009147 Bacteria 7351
75 Ga0105241_10000022 3300009174 Bacteria 142422
76 Ga0105241_10000024 3300009174 Bacteria 140808
77 Ga0105241_10012790 3300009174 Bacteria 6158
78 Ga0105242_10001664 3300009176 Bacteria 17586
79 Ga0105248_10396537 3300009177 Bacteria 1554
80 Ga0105237_10063891 3300009545 Bacteria 3678
81 Ga0105238_10000145 3300009551 Bacteria 77797
82 Ga0105238_10007245 3300009551 Bacteria 11103
83 Ga0105239_10009012 3300010375 Bacteria 11294
84 Ga0105239_10017570 3300010375 Bacteria 7912
85 Ga0157369_10000057 3300013105 Bacteria 157096
86 Ga0157369_10004146 3300013105 Bacteria 17171
87 Ga0157374_10021590 3300013296 Bacteria 5732
88 Ga0157378_10417881 3300013297 Bacteria 1325
89 Ga0163162_10001472 3300013306 Bacteria 21907
90 Ga0163162_10252384 3300013306 Bacteria 1896
91 Ga0157375_10006577 3300013308 Bacteria 10117
92 Ga0157375_10084656 3300013308 Bacteria 3220
93 Ga0182008_10016185 3300014497 Bacteria 3880
94 Ga0157379_10365057 3300014968 Bacteria 1323
95 Ga0157376_10009818 3300014969 Bacteria 6977
96 Ga0157376_10045471 3300014969 Bacteria 3615
97 Ga0182006_1000469 3300015261 Bacteria 31554
98 Ga0182005_1004178 3300015265 Bacteria 4720
99 Ga0163161_10002763 3300017792 Bacteria 12476
100 Ga0209674_100810 3300025226 Bacteria 10420
101 Ga0209437_103487 3300025233 Bacteria 2843
102 Ga0209148_1002949 3300025254 Bacteria 5153
103 Ga0209129_1003138 3300025258 Bacteria 7411
104 Ga0209758_1010302 3300025297 Bacteria 5618
105 Ga0207426_1010593 3300025302 Bacteria 3570
106 Ga0207680_10000001 3300025903 Bacteria 1091453
107 Ga0207647_10000031 3300025904 Bacteria 104231
108 Ga0207645_10174563 3300025907 Bacteria 1409
109 Ga0207705_10029038 3300025909 Bacteria 3944
110 Ga0207684_10000176 3300025910 Bacteria 104968
111 Ga0207684_10000187 3300025910 Bacteria 98338
112 Ga0207654_10000044 3300025911 Bacteria 99046
113 Ga0207654_10000045 3300025911 Bacteria 94742
114 Ga0207707_10016202 3300025912 Bacteria 6503
115 Ga0207707_10021230 3300025912 Bacteria 5676
116 Ga0207707_10063767 3300025912 Bacteria 3207
117 Ga0207707_10110463 3300025912 Bacteria 2403
118 Ga0207707_10256800 3300025912 Bacteria 1517
119 Ga0207695_10002518 3300025913 Bacteria 26913
120 Ga0207695_10018333 3300025913 Bacteria 8097
121 Ga0207671_10008084 3300025914 Bacteria 8986
122 Ga0207660_10024123 3300025917 Bacteria 4114
123 Ga0207660_10043551 3300025917 Bacteria 3155
124 Ga0207649_10007370 3300025920 Bacteria 5985
125 Ga0207652_10002327 3300025921 Bacteria 16095
126 Ga0207652_10179579 3300025921 Bacteria 1901
127 Ga0207646_10001909 3300025922 Bacteria 25104
128 Ga0207646_10040805 3300025922 Bacteria 4173
129 Ga0207646_10203102 3300025922 Bacteria 1790
130 Ga0207694_10000828 3300025924 Bacteria 27515
131 Ga0207694_10001912 3300025924 Bacteria 17271
132 Ga0207650_10044948 3300025925 Bacteria 3248
133 Ga0207686_10061620 3300025934 Bacteria 2379
134 Ga0207704_10048257 3300025938 Bacteria 2551
135 Ga0207661_10002305 3300025944 Bacteria 13147
136 Ga0207661_10132191 3300025944 Bacteria 2139
137 Ga0207661_10157128 3300025944 Bacteria 1970
138 Ga0207679_10002324 3300025945 Bacteria 11694
139 Ga0207667_10231223 3300025949 Bacteria 1893
140 Ga0207658_10013378 3300025986 Bacteria 5604
141 Ga0207639_10109780 3300026041 Bacteria 2245
142 Ga0207708_10214347 3300026075 Bacteria 1540
143 Ga0207641_10018640 3300026088 Bacteria 5689
144 Ga0207648_10214156 3300026089 Bacteria 1711
145 Ga0207674_10005355 3300026116 Bacteria 15260
146 Ga0207674_10007486 3300026116 Bacteria 12728
147 Ga0207675_100114641 3300026118 Bacteria 2546
148 Ga0207683_10073705 3300026121 Bacteria 3020
149 Ga0207683_10173897 3300026121 Bacteria 1951
150 Ga0207698_10053413 3300026142 Bacteria 3101
151 Ga0268266_10000067 3300028379 Bacteria 241577
152 Ga0268266_10071792 3300028379 Bacteria 3001
153 Ga0268264_10161542 3300028381 Bacteria 2019
154 Ga0265318_10037043 3300028577 Bacteria 1870
155 Ga0265323_10008456 3300028653 Bacteria 4243
156 Ga0265323_10031725 3300028653 Bacteria 1962
157 Ga0265322_10008453 3300028654 Bacteria 2997
158 Ga0265338_10039847 3300028800 Bacteria 4423
159 Ga0265338_10073407 3300028800 Bacteria 2916
160 Ga0265324_10000025 3300029957 Bacteria 161982
161 Ga0265330_10000153 3300031235 Bacteria 55577
162 Ga0265330_10005721 3300031235 Bacteria 6170
163 Ga0265330_10011068 3300031235 Bacteria 4235
164 Ga0265330_10022360 3300031235 Bacteria 2877
165 Ga0265330_10053902 3300031235 Bacteria 1759
166 Ga0265332_10001224 3300031238 Bacteria 14849
167 Ga0265332_10008098 3300031238 Bacteria 4724
168 Ga0265328_10001461 3300031239 Bacteria 10906
169 Ga0265320_10025817 3300031240 Bacteria 3083
170 Ga0265325_10003534 3300031241 Bacteria 10160
171 Ga0265325_10065297 3300031241 Bacteria 1838
172 Ga0265329_10000306 3300031242 Bacteria 25996
173 Ga0265329_10003698 3300031242 Bacteria 6595
174 Ga0265329_10027161 3300031242 Bacteria 1882
175 Ga0265340_10002443 3300031247 Bacteria 10570
176 Ga0265340_10036137 3300031247 Bacteria 2450
177 Ga0265339_10000014 3300031249 Bacteria 187463
178 Ga0265339_10010485 3300031249 Bacteria 5755
179 Ga0265331_10000126 3300031250 Bacteria 101034
180 Ga0265331_10002134 3300031250 Bacteria 13599
181 Ga0265331_10017069 3300031250 Bacteria 3795
182 Ga0265316_10000265 3300031344 Bacteria 59393
183 Ga0265316_10004335 3300031344 Bacteria 14144
184 Ga0265316_10066232 3300031344 Bacteria 2796
185 Ga0265313_10006921 3300031595 Bacteria 7878
186 Ga0265314_10000152 3300031711 Bacteria 103893
187 Ga0265314_10000201 3300031711 Bacteria 88062
188 Ga0265314_10018009 3300031711 Bacteria 5524
189 Ga0265342_10001012 3300031712 Bacteria 27683
190 Ga0265342_10004834 3300031712 Bacteria 10449
191 Ga0265342_10006649 3300031712 Bacteria 8578
192 Ga0265342_10013707 3300031712 Bacteria 5419
193 Ga0265342_10052561 3300031712 Bacteria 2428
194 Ga0316576_10120203 3300031727 Bacteria 1972
195 Ga0316578_10022659 3300031728 Bacteria 3505
196 Ga0307412_10001161 3300031911 Bacteria 15089
197 Ga0316580_10003331 3300032139 Bacteria 4548
198 Ga0307510_10008873 3300033180 Bacteria 11984
199 Ga0307510_10056776 3300033180 Bacteria 4071
200 Ga0373953_0019077 3300035117 Bacteria 2547
201 Ga0316574_0008389 3300035398 Bacteria 5736
202 Ga0316574_0094359 3300035398 Bacteria 1911
203 Ga0373947_0160411 3300035725 Bacteria 1454
204 Ga0316582_0086552 3300036647 Bacteria 2055
205 Ga0436363_1069939 3300039450 Bacteria 9748
206 Ga0439436_0000003 3300041404 Bacteria 186684
207 Ga0439465_0006022 3300041413 Bacteria 3854
208 Ga0451807_0629077 3300041486 Bacteria 3616
209 Ga0451577_0027171 3300042876 Bacteria 5180
210 Ga0451577_0032772 3300042876 Bacteria 4682
211 Ga0451577_0076667 3300042876 Bacteria 2981
212 Ga0451577_0306383 3300042876 Bacteria 1439
213 Ga0466982_0000041 3300044672 Bacteria 40889
214 Ga0453683_0018424 3300044673 Bacteria 4483
215 Ga0466961_0162891 3300044693 Bacteria 1390
216 Ga0466963_0012510 3300044694 Bacteria 5197
217 Ga0453684_0000540 3300044712 Bacteria 143492
218 Ga0453684_0011110 3300044712 Bacteria 15192
219 Ga0453684_0189488 3300044712 Bacteria 2407
220 Ga0451576_0042620 3300045051 Bacteria 4791
221 Ga0451576_0175095 3300045051 Bacteria 2240
222 Ga0495617_000059 3300046452 Bacteria 97595
223 Ga0495603_0141041 3300046455 Bacteria 1402
224 Ga0495638_0000089 3300046460 Bacteria 151067
225 Ga0495650_0001430 3300046471 Bacteria 23153
226 Ga0495585_0001919 3300046492 Bacteria 15568
227 Ga0495607_0000117 3300046501 Bacteria 83890
228 Ga0495583_0006822 3300046506 Bacteria 7370
229 Ga0495606_0001062 3300046507 Bacteria 39712
230 Ga0495606_0001499 3300046507 Bacteria 31017
231 Ga0495610_0002831 3300046512 Bacteria 14131
232 Ga0495616_0000028 3300046513 Bacteria 133873
233 Ga0495616_0059718 3300046513 Bacteria 1874
234 Ga0495620_0000088 3300046515 Bacteria 74950
235 Ga0495631_0048035 3300046518 Bacteria 1872
236 Ga0495632_0009414 3300046519 Bacteria 5895
237 Ga0495637_0004833 3300046520 Bacteria 6940
238 Ga0495587_0113502 3300046536 Bacteria 1555
239 Ga0495609_0001744 3300046538 Bacteria 13996
240 Ga0495667_0019007 3300046559 Bacteria 4637
241 Ga0495668_0113646 3300046616 Bacteria 1481
242 Ga0495611_0000059 3300046648 Bacteria 78609
243 Ga0495625_0000288 3300046660 Bacteria 77990
244 Ga0495625_0012337 3300046660 Bacteria 6929
245 Ga0495625_0016327 3300046660 Bacteria 5846
246 Ga0495658_0005330 3300046683 Bacteria 6328
247 Ga0495670_0000538 3300046691 Bacteria 18046
248 Ga0495670_0004197 3300046691 Bacteria 7058
249 Ga0495671_0003578 3300046692 Bacteria 9491
250 Ga0495649_0098335 3300046694 Bacteria 1557
251 Ga0495589_0000056 3300046794 Bacteria 109990
252 Ga0495660_0000295 3300046810 Bacteria 45627
253 Ga0495679_000010 3300047446 Bacteria 337760
254 Ga0495673_0000244 3300047469 Bacteria 76503
255 Ga0495673_0082886 3300047469 Bacteria 1325
256 Ga0495686_0000227 3300047472 Bacteria 103680
257 Ga0495686_0000311 3300047472 Bacteria 82066
258 Ga0495602_0117481 3300048088 Bacteria 2147
259 Ga0496102_0196842 3300048905 Bacteria 1899
260 Ga0496104_0000017 3300048907 Bacteria 325877
261 Ga0496105_0000009 3300048908 Bacteria 325734
262 Ga0496106_0085529 3300048909 Bacteria 2428
263 Ga0496116_0030321 3300048919 Bacteria 3888
264 Ga0496117_0012191 3300048920 Bacteria 7606
265 Ga0496117_0012565 3300048920 Bacteria 7451
266 Ga0496118_0013214 3300048921 Bacteria 7829
267 Ga0496118_0013235 3300048921 Bacteria 7825
268 Ga0496119_0006915 3300048922 Bacteria 10349
269 Ga0496121_0000530 3300048924 Bacteria 72524
270 Ga0496121_0000756 3300048924 Bacteria 59448
271 Ga0496121_0027702 3300048924 Bacteria 5296
272 Ga0496121_0075592 3300048924 Bacteria 2690
273 Ga0496122_0021025 3300048925 Bacteria 5862
274 Ga0496122_0022028 3300048925 Bacteria 5678
275 Ga0496122_0030639 3300048925 Bacteria 4501
276 Ga0496123_0012435 3300048926 Bacteria 7257
277 Ga0496124_0001213 3300048927 Bacteria 39919
278 Ga0496125_0009298 3300048928 Bacteria 10138
279 Ga0496125_0023628 3300048928 Bacteria 5669
280 Ga0496126_0044953 3300048929 Bacteria 4062
281 Ga0496126_0149443 3300048929 Bacteria 2003
282 Ga0495678_000211 3300049459 Bacteria 67511
283 Ga0495682_0013316 3300049460 Bacteria 3133
284 Ga0501077_0033863 3300049593 Bacteria 3252
285 nmdc:mga05p37_11165_c1 3300050507 Bacteria 10675
286 nmdc:mga0a205_41393_c1 3300050515 Bacteria 4436
287 Ga0495612_0069808 3300053078 Bacteria 1464
288 Ga0500643_000051 3300053087 Bacteria 145619
289 Ga0500555_001410 3300053103 Bacteria 7404
290 Ga0501084_0007823 3300054114 Bacteria 8796
291 Ga0501082_0044105 3300060353 Bacteria 3847
292 2595449272 2593339238 Bacteria 4182970
293 2595450560 2593339239 Bacteria 4124669
294 2721029293 2718218334 Bacteria 4765486
295 2735835110 2734482264 Unclassified 5014763
296 2739228971 2738543009 Bacteria 4944499
297 2819566382 2818991440 Bacteria 4774720
298 2842916795 2842914999 Bacteria 4419378
299 2842922581 2842918807 Bacteria 4289178
300 2884342501 2884338543 Bacteria 4610696
301 2904467045 2904463128 Bacteria 4775606
302 2919407516 2919404418 Bacteria 4232372
303 2941475646 2941471342 Bacteria 5018624
304 2953996703 2953994433 Bacteria 4303959
305 Ga0099796_10026208
306 JGI24738J21930_10000352
307 Ga0006562J51391_1031759
308 Ga0006562J51391_1031763
309 Ga0055535_1000117
310 Ga0070658_10019418
311 Ga0070658_10037969
312 Ga0070683_100011390
313 Ga0070683_100164525
314 Ga0070683_100447251
315 Ga0070670_100084385
316 Ga0070670_100122507
317 Ga0070666_10000079
318 Ga0070680_100029014
319 Ga0070682_100001541
320 Ga0068868_100230498
321 Ga0070661_100002731
322 Ga0070661_100029740
323 Ga0070668_100100268
324 Ga0070667_100015909
325 Ga0070701_10014842
326 Ga0070708_100000280
327 Ga0070708_100151130
328 Ga0070678_100233465
329 Ga0070681_10006156
330 Ga0070681_10029428
331 Ga0070681_10055462
332 Ga0070681_10068581
333 Ga0068867_100120482
334 Ga0070706_100000220
335 Ga0070707_100015469
336 Ga0070707_100066581
337 Ga0070698_100018552
338 Ga0070679_100038844
339 Ga0070679_100081688
340 Ga0070679_100138714
341 Ga0070684_100014236
342 Ga0070684_100032681
343 Ga0070684_100057635
344 Ga0070684_100085969
345 Ga0070697_100003133
346 Ga0070697_100148664
347 Ga0068853_100021885
348 Ga0068853_100050657
349 Ga0070672_100025984
350 Ga0070696_100359304
351 Ga0070665_100004714
352 Ga0068855_100091746
353 Ga0068855_100129410
354 Ga0070664_100000674
355 Ga0070664_100018693
356 Ga0068857_100001408
357 Ga0068857_100086338
358 Ga0070702_100011894
359 Ga0068859_100091554
360 Ga0068864_100010200
361 Ga0068860_100043115
362 Ga0068860_100181717
363 Ga0081455_10000016
364 Ga0097621_100007334
365 Ga0068871_100122816
366 Ga0068871_100206085
367 Ga0075428_100304565
368 Ga0075433_10059864
369 Ga0068865_100053428
370 Ga0068865_100054566
371 Ga0097620_100091555
372 Ga0105240_10002672
373 Ga0105240_10049639
374 Ga0105240_10077426
375 Ga0105240_10134870
376 Ga0105240_10616141
377 Ga0105245_10185056
378 Ga0114129_10032686
379 Ga0105241_10000022
380 Ga0105241_10000024
381 Ga0105241_10012790
382 Ga0105242_10001664
383 Ga0105248_10396537
384 Ga0105237_10063891
385 Ga0105238_10000145
386 Ga0105238_10007245
387 Ga0105239_10009012
388 Ga0105239_10017570
389 Ga0157369_10000057
390 Ga0157369_10004146
391 Ga0157374_10021590
392 Ga0157378_10417881
393 Ga0163162_10001472
394 Ga0163162_10252384
395 Ga0157375_10006577
396 Ga0157375_10084656
397 Ga0182008_10016185
398 Ga0157379_10365057
399 Ga0157376_10009818
400 Ga0157376_10045471
401 Ga0182006_1000469
402 Ga0182005_1004178
403 Ga0163161_10002763
404 Ga0209674_100810
405 Ga0209437_103487
406 Ga0209148_1002949
407 Ga0209129_1003138
408 Ga0209758_1010302
409 Ga0207426_1010593
410 Ga0207680_10000001
411 Ga0207647_10000031
412 Ga0207645_10174563
413 Ga0207705_10029038
414 Ga0207684_10000176
415 Ga0207684_10000187
416 Ga0207654_10000044
417 Ga0207654_10000045
418 Ga0207707_10016202
419 Ga0207707_10021230
420 Ga0207707_10063767
421 Ga0207707_10110463
422 Ga0207707_10256800
423 Ga0207695_10002518
424 Ga0207695_10018333
425 Ga0207671_10008084
426 Ga0207660_10024123
427 Ga0207660_10043551
428 Ga0207649_10007370
429 Ga0207652_10002327
430 Ga0207652_10179579
431 Ga0207646_10001909
432 Ga0207646_10040805
433 Ga0207646_10203102
434 Ga0207694_10000828
435 Ga0207694_10001912
436 Ga0207650_10044948
437 Ga0207686_10061620
438 Ga0207704_10048257
439 Ga0207661_10002305
440 Ga0207661_10132191
441 Ga0207661_10157128
442 Ga0207679_10002324
443 Ga0207667_10231223
444 Ga0207658_10013378
445 Ga0207639_10109780
446 Ga0207708_10214347
447 Ga0207641_10018640
448 Ga0207648_10214156
449 Ga0207674_10005355
450 Ga0207674_10007486
451 Ga0207675_100114641
452 Ga0207683_10073705
453 Ga0207683_10173897
454 Ga0207698_10053413
455 Ga0268266_10000067
456 Ga0268266_10071792
457 Ga0268264_10161542
458 Ga0265318_10037043
459 Ga0265323_10008456
460 Ga0265323_10031725
461 Ga0265322_10008453
462 Ga0265338_10039847
463 Ga0265338_10073407
464 Ga0265324_10000025
465 Ga0265330_10000153
466 Ga0265330_10005721
467 Ga0265330_10011068
468 Ga0265330_10022360
469 Ga0265330_10053902
470 Ga0265332_10001224
471 Ga0265332_10008098
472 Ga0265328_10001461
473 Ga0265320_10025817
474 Ga0265325_10003534
475 Ga0265325_10065297
476 Ga0265329_10000306
477 Ga0265329_10003698
478 Ga0265329_10027161
479 Ga0265340_10002443
480 Ga0265340_10036137
481 Ga0265339_10000014
482 Ga0265339_10010485
483 Ga0265331_10000126
484 Ga0265331_10002134
485 Ga0265331_10017069
486 Ga0265316_10000265
487 Ga0265316_10004335
488 Ga0265316_10066232
489 Ga0265313_10006921
490 Ga0265314_10000152
491 Ga0265314_10000201
492 Ga0265314_10018009
493 Ga0265342_10001012
494 Ga0265342_10004834
495 Ga0265342_10006649
496 Ga0265342_10013707
497 Ga0265342_10052561
498 Ga0316576_10120203
499 Ga0316578_10022659
500 Ga0307412_10001161
501 Ga0316580_10003331
502 Ga0307510_10008873
503 Ga0307510_10056776
504 Ga0373953_0019077
505 Ga0316574_0008389
506 Ga0316574_0094359
507 Ga0373947_0160411
508 Ga0316582_0086552
509 Ga0436363_1069939
510 Ga0439436_0000003
511 Ga0439465_0006022
512 Ga0451807_0629077
513 Ga0451577_0027171
514 Ga0451577_0032772
515 Ga0451577_0076667
516 Ga0451577_0306383
517 Ga0466982_0000041
518 Ga0453683_0018424
519 Ga0466961_0162891
520 Ga0466963_0012510
521 Ga0453684_0000540
522 Ga0453684_0011110
523 Ga0453684_0189488
524 Ga0451576_0042620
525 Ga0451576_0175095
526 Ga0495617_000059
527 Ga0495603_0141041
528 Ga0495638_0000089
529 Ga0495650_0001430
530 Ga0495585_0001919
531 Ga0495607_0000117
532 Ga0495583_0006822
533 Ga0495606_0001062
534 Ga0495606_0001499
535 Ga0495610_0002831
536 Ga0495616_0000028
537 Ga0495616_0059718
538 Ga0495620_0000088
539 Ga0495631_0048035
540 Ga0495632_0009414
541 Ga0495637_0004833
542 Ga0495587_0113502
543 Ga0495609_0001744
544 Ga0495667_0019007
545 Ga0495668_0113646
546 Ga0495611_0000059
547 Ga0495625_0000288
548 Ga0495625_0012337
549 Ga0495625_0016327
550 Ga0495658_0005330
551 Ga0495670_0000538
552 Ga0495670_0004197
553 Ga0495671_0003578
554 Ga0495649_0098335
555 Ga0495589_0000056
556 Ga0495660_0000295
557 Ga0495679_000010
558 Ga0495673_0000244
559 Ga0495673_0082886
560 Ga0495686_0000227
561 Ga0495686_0000311
562 Ga0495602_0117481
563 Ga0496102_0196842
564 Ga0496104_0000017
565 Ga0496105_0000009
566 Ga0496106_0085529
567 Ga0496116_0030321
568 Ga0496117_0012191
569 Ga0496117_0012565
570 Ga0496118_0013214
571 Ga0496118_0013235
572 Ga0496119_0006915
573 Ga0496121_0000530
574 Ga0496121_0000756
575 Ga0496121_0027702
576 Ga0496121_0075592
577 Ga0496122_0021025
578 Ga0496122_0022028
579 Ga0496122_0030639
580 Ga0496123_0012435
581 Ga0496124_0001213
582 Ga0496125_0009298
583 Ga0496125_0023628
584 Ga0496126_0044953
585 Ga0496126_0149443
586 Ga0495678_000211
587 Ga0495682_0013316
588 Ga0501077_0033863
589 nmdc:mga05p37_11165_c1
590 nmdc:mga0a205_41393_c1
591 Ga0495612_0069808
592 Ga0500643_000051
593 Ga0500555_001410
594 Ga0501084_0007823
595 Ga0501082_0044105
596 2595449272
597 2595450560
598 2721029293
599 2735835110
600 2739228971
601 2819566382
602 2842916795
603 2842922581
604 2884342501
605 2904467045
606 2919407516
607 2941475646
608 2953996703

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

26

72

0.96

PF00180

Iso_dh

Isocitrate/isopropylmalate dehydrogenase

53

412

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wuo-assembly1.cif.gz_B structure of the e270a mutant isopropylmalate dehydrogenase from thermus thermophilus in complex with ipm, mn and nadh 0.969 4 347
4wuo-assembly1.cif.gz_B structure of the e270a mutant isopropylmalate dehydrogenase from thermus thermophilus in complex with ipm, mn and nadh 0.9608 4 347
6xxy-assembly1.cif.gz_B crystal structure of haemophilus influenzae 3-isopropylmalate dehydrogenase in complex with o-isobutenyl oxalylhydroxamate. 0.9551 2 346
5j33-assembly3.cif.gz_F isopropylmalate dehydrogenase in complex with nad+ 0.9548 1 348
4xxv-assembly1.cif.gz_B crystal structure of 3-isopropylmalate dehydrogenase from burkholderia thailandensis in complex with nad 0.9537 4 346
ID Description Score Start End Superfamily
5hn5A00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9516 3 349 3.40.718.10
3u1hA00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9382 4 351 3.40.718.10
5hn5A00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9291 3 349 3.40.718.10
af_P76251_1_360_3.40.718.10 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.926 1 347 3.40.718.10
af_Q58991_1_346_3.40.718.10 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9235 3 352 3.40.718.10
ID Description Score Start End GO Terms
AF-A0A537LYV8-F1-model_v4 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH) 0.9829 1 348 GO:0000287
GO:0003862
GO:0005829
GO:0009098
GO:0051287
AF-A0A519P5A9-F1-model_v4 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.9819 36 353 GO:0000287
GO:0003862
GO:0005829
GO:0009098
GO:0051287
AF-A0A6L7UA27-F1-model_v4 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH) 0.9802 1 348 GO:0000287
GO:0003862
GO:0005829
GO:0009098
GO:0051287
AF-A0A4Y8ZWC2-F1-model_v4 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH) 0.9791 3 353 GO:0000287
GO:0003862
GO:0005829
GO:0009098
GO:0051287
AF-B9IUZ1-F1-model_v4 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH) 0.978 2 353 GO:0000287
GO:0003862
GO:0005829
GO:0009098
GO:0051287

Map