F397616

General Info

Members Datasets Scaffolds Average Seq Length
304 225 608 295

Family's Representative Sequence

Representative Sequence 3300025922|Ga0207646_10096390|Ga0207646_100963903
Length 333
Sequence MSEPRQPAKSGIVNAMSVDVEDYFQVSAFDTIVSRASWDTRESRVVQNTDRLLDLFARHGVRATFFVLGWVAERFPALVRDIAARGHEIASHGYHHQLLYTLTPEQFREDVRSAKAALESASGGAVVGYRAPSFSIINSSLWALDVLMEEGYIYDASIFPVHHDRYGIPDAKRHVHRLERAAGPIIEVPASTVRVGGVNLPIAGGGYFRLLPYAWTRWGIGRVNRVEGQPVVFYVHPWEIDPEQPRFDVGAATRIRHYTGLRSTMPRLERLLNDFAFDSIAGLLKLPDTVRLKADTTFEDVRSVRLQPDLTVPPKTDTISRGHRKKTSGDAAA

Samples

Sample ID Description Type Environment
1 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
25 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
47 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
66 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
69 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
78 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
79 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
80 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
81 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
82 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
83 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
84 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
85 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
86 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
87 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
88 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
89 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
127 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
128 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
129 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
130 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
131 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
132 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
133 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
134 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
135 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
136 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
137 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
138 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
139 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
140 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
141 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
142 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
143 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
144 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
145 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
146 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
147 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
148 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
149 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
150 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
151 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
152 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
153 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
154 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
155 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
156 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
157 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
158 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
159 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
160 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
161 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
162 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
163 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
164 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
165 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
166 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
167 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
168 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
169 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
170 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
171 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
172 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
173 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
174 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
175 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
176 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
177 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
178 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
179 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
180 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
181 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
182 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
183 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
184 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
185 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
186 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
187 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
188 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
189 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
190 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
191 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
192 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
193 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
194 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
195 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
196 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
197 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
198 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
199 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
200 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
201 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
202 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
203 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
204 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
205 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
206 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
207 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
208 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
209 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
210 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
211 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
212 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
213 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
214 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
215 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
216 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
217 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
218 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
219 2821131069 Duganella sp. 1224 Isolate Unclassified
220 2842711865 Duganella sp. R-73148 Isolate Unclassified
221 2857558681 Duganella sp. R-74565 Isolate Unclassified
222 2857564685 Duganella sp. R-74599 Isolate Unclassified
223 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
224 2904424332 Duganella sp. 1411 Isolate Rhizosphere
225 2939611941 Rhodanobacter soli 1757 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.71
Metatranscriptomes 0.99
Isolates 2.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.66
Nodule 0.33
Rhizoplane 0.99
Rhizosphere 91.78
Stem 0
Stem Tuber 0
Unclassified 16.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207646_10096390 3300025922 Bacteria 2650
2 MRS1b_contig_3469457 2162886011 Unclassified 1560
3 JGI25154J39366_1000693 3300002738 Bacteria 15424
4 rootH1_10068600 3300003316 Bacteria 2298
5 rootL2_10003659 3300003322 Bacteria 27003
6 rootL2_10003660 3300003322 Bacteria 24915
7 Ga0065712_10068294 3300005290 Bacteria 12109
8 Ga0070658_10000001 3300005327 Bacteria 856789
9 Ga0070658_10214213 3300005327 Bacteria 1628
10 Ga0070676_10200043 3300005328 Bacteria 1309
11 Ga0070683_100104965 3300005329 Bacteria 2663
12 Ga0070690_100193023 3300005330 Bacteria 1413
13 Ga0070670_100126203 3300005331 Bacteria 2209
14 Ga0070666_10061380 3300005335 Bacteria 2545
15 Ga0070666_10174673 3300005335 Unclassified 1506
16 Ga0068868_100157932 3300005338 Unclassified 1871
17 Ga0070660_100008854 3300005339 Bacteria 7055
18 Ga0070687_100134300 3300005343 Unclassified 1432
19 Ga0070692_10008759 3300005345 Bacteria 4525
20 Ga0070675_100000089 3300005354 Bacteria 53123
21 Ga0070675_100000799 3300005354 Bacteria 22104
22 Ga0070671_100066421 3300005355 Bacteria 3006
23 Ga0070671_100214428 3300005355 Unclassified 1633
24 Ga0070673_100351000 3300005364 Bacteria 1309
25 Ga0070659_100275461 3300005366 Bacteria 1399
26 Ga0070667_100024445 3300005367 Bacteria 5017
27 Ga0070714_100000135 3300005435 Bacteria 58468
28 Ga0070713_100222401 3300005436 Bacteria 1713
29 Ga0070711_100346104 3300005439 Unclassified 1194
30 Ga0070705_100039784 3300005440 Bacteria 2670
31 Ga0070694_100110230 3300005444 Bacteria 1960
32 Ga0070681_10005808 3300005458 Bacteria 11943
33 Ga0070681_10019557 3300005458 Bacteria 6780
34 Ga0070681_10201463 3300005458 Bacteria 1909
35 Ga0068867_100165689 3300005459 Unclassified 1746
36 Ga0070706_100149740 3300005467 Bacteria 2179
37 Ga0070706_100231211 3300005467 Bacteria 1726
38 Ga0070707_100106455 3300005468 Bacteria 2720
39 Ga0070698_100002000 3300005471 Bacteria 22639
40 Ga0070698_100115333 3300005471 Bacteria 2651
41 Ga0070698_100178916 3300005471 Bacteria 2059
42 Ga0070699_100136472 3300005518 Bacteria 2164
43 Ga0070684_100109945 3300005535 Unclassified 2470
44 Ga0070697_100075703 3300005536 Bacteria 2767
45 Ga0070697_100150583 3300005536 Bacteria 1961
46 Ga0070697_100446098 3300005536 Unclassified 1127
47 Ga0070696_100002297 3300005546 Bacteria 12607
48 Ga0070693_100042087 3300005547 Bacteria 2573
49 Ga0070665_100033331 3300005548 Bacteria 5184
50 Ga0068859_100070300 3300005617 Unclassified 3536
51 Ga0068861_100107518 3300005719 Bacteria 2230
52 Ga0068861_100330191 3300005719 Unclassified 1331
53 Ga0068870_10048230 3300005840 Unclassified 2242
54 Ga0068863_100155257 3300005841 Bacteria 2191
55 Ga0068858_100159297 3300005842 Unclassified 2125
56 Ga0068860_100007784 3300005843 Bacteria 10702
57 Ga0068860_100020616 3300005843 Bacteria 6386
58 Ga0068860_100459201 3300005843 Bacteria 1267
59 Ga0068862_100008336 3300005844 Bacteria 8578
60 Ga0068862_100011870 3300005844 Bacteria 7194
61 Ga0081539_10011005 3300005985 Bacteria 7242
62 Ga0070715_10176810 3300006163 Bacteria 1067
63 Ga0070712_100003499 3300006175 Bacteria 9660
64 Ga0068871_100129433 3300006358 Unclassified 2139
65 Ga0075428_100006489 3300006844 Bacteria 13008
66 Ga0075428_100073310 3300006844 Bacteria 3739
67 Ga0075431_100000103 3300006847 Bacteria 53399
68 Ga0075433_10056069 3300006852 Bacteria 3441
69 Ga0075434_100012902 3300006871 Bacteria 7936
70 Ga0075434_100468456 3300006871 Unclassified 1281
71 Ga0075429_100149363 3300006880 Bacteria 2046
72 Ga0075429_100229538 3300006880 Bacteria 1626
73 Ga0075436_100000640 3300006914 Bacteria 23008
74 Ga0097620_100070300 3300006931 Unclassified 3536
75 Ga0079104_1008442 3300006946 Bacteria 3602
76 Ga0105240_10019757 3300009093 Bacteria 8998
77 Ga0105240_10163311 3300009093 Bacteria 2643
78 Ga0105240_10517703 3300009093 Bacteria 1324
79 Ga0111539_10212422 3300009094 Bacteria 2254
80 Ga0105245_10800491 3300009098 Unclassified 980
81 Ga0114129_10000083 3300009147 Bacteria 87553
82 Ga0114129_10006620 3300009147 Bacteria 16449
83 Ga0114129_10009900 3300009147 Bacteria 13590
84 Ga0114129_10074824 3300009147 Bacteria 4717
85 Ga0105243_10006785 3300009148 Bacteria 8829
86 Ga0105243_10035112 3300009148 Bacteria 3886
87 Ga0105241_10229260 3300009174 Bacteria 1565
88 Ga0105242_10044901 3300009176 Unclassified 3579
89 Ga0105242_10062552 3300009176 Bacteria 3063
90 Ga0105248_10000936 3300009177 Bacteria 32515
91 Ga0105248_10084297 3300009177 Bacteria 3575
92 Ga0105248_10089073 3300009177 Unclassified 3473
93 Ga0105248_10480561 3300009177 Unclassified 1400
94 Ga0105248_10600318 3300009177 Unclassified 1242
95 Ga0105237_10008530 3300009545 Bacteria 11080
96 Ga0105238_10083830 3300009551 Bacteria 3177
97 Ga0105238_10207641 3300009551 Bacteria 1934
98 Ga0105239_10056384 3300010375 Bacteria 4310
99 Ga0105246_10059589 3300011119 Bacteria 2649
100 Ga0105246_10224256 3300011119 Unclassified 1475
101 Ga0157370_10023234 3300013104 Bacteria 6158
102 Ga0157370_10077142 3300013104 Unclassified 3139
103 Ga0157369_10005415 3300013105 Bacteria 14848
104 Ga0157378_10025938 3300013297 Bacteria 5164
105 Ga0157378_10166992 3300013297 Bacteria 2062
106 Ga0157378_10277953 3300013297 Bacteria 1613
107 Ga0157378_10441699 3300013297 Unclassified 1290
108 Ga0163162_10054274 3300013306 Bacteria 4031
109 Ga0163162_10074125 3300013306 Bacteria 3461
110 Ga0163162_10106101 3300013306 Unclassified 2904
111 Ga0163162_10451911 3300013306 Unclassified 1417
112 Ga0163162_10491207 3300013306 Unclassified 1358
113 Ga0163162_10512317 3300013306 Archaea 1330
114 Ga0157372_10246702 3300013307 Bacteria 2072
115 Ga0157375_10087244 3300013308 Unclassified 3172
116 Ga0157375_10093157 3300013308 Bacteria 3078
117 Ga0157375_10110704 3300013308 Bacteria 2844
118 Ga0157375_10484278 3300013308 Bacteria 1402
119 Ga0157375_10878062 3300013308 Unclassified 1042
120 Ga0163163_10033000 3300014325 Bacteria 5004
121 Ga0157380_10040365 3300014326 Bacteria 3634
122 Ga0157380_10301048 3300014326 Bacteria 1477
123 Ga0157379_10021907 3300014968 Bacteria 5662
124 Ga0157376_10083690 3300014969 Bacteria 2745
125 Ga0157376_10088497 3300014969 Bacteria 2675
126 Ga0182007_10031133 3300015262 Bacteria 1819
127 Ga0182005_1000022 3300015265 Bacteria 266181
128 Ga0163161_10173227 3300017792 Bacteria 1651
129 Ga0206354_10457912 3300020081 Bacteria 5606
130 Ga0206353_11997182 3300020082 Bacteria 20195
131 Ga0213873_10000008 3300021358 Bacteria 263363
132 Ga0213876_10000005 3300021384 Bacteria 727326
133 Ga0213876_10000542 3300021384 Bacteria 28472
134 Ga0209437_102285 3300025233 Bacteria 3780
135 Ga0209646_1000054 3300025246 Bacteria 279447
136 Ga0209026_1012077 3300025250 Bacteria 1520
137 Ga0207680_10115950 3300025903 Bacteria 1745
138 Ga0207680_10316935 3300025903 Unclassified 1090
139 Ga0207647_10000133 3300025904 Bacteria 58513
140 Ga0207645_10084843 3300025907 Bacteria 2033
141 Ga0207645_10094780 3300025907 Unclassified 1922
142 Ga0207643_10016702 3300025908 Unclassified 4004
143 Ga0207705_10000002 3300025909 Bacteria 2046852
144 Ga0207684_10042414 3300025910 Bacteria 3856
145 Ga0207707_10024461 3300025912 Bacteria 5284
146 Ga0207695_10256351 3300025913 Bacteria 1648
147 Ga0207693_10014434 3300025915 Bacteria 6350
148 Ga0207660_10069143 3300025917 Bacteria 2563
149 Ga0207662_10137207 3300025918 Bacteria 1547
150 Ga0207657_10000589 3300025919 Bacteria 38460
151 Ga0207657_10017176 3300025919 Bacteria 6951
152 Ga0207657_10023817 3300025919 Bacteria 5691
153 Ga0207649_10062107 3300025920 Bacteria 2354
154 Ga0207694_10080823 3300025924 Bacteria 2551
155 Ga0207659_10000229 3300025926 Bacteria 34125
156 Ga0207659_10000395 3300025926 Bacteria 26284
157 Ga0207664_10000129 3300025929 Bacteria 65837
158 Ga0207664_10268272 3300025929 Unclassified 1494
159 Ga0207644_10050834 3300025931 Bacteria 2972
160 Ga0207690_10000442 3300025932 Bacteria 26857
161 Ga0207690_10002370 3300025932 Bacteria 11418
162 Ga0207690_10231046 3300025932 Bacteria 1420
163 Ga0207706_10042935 3300025933 Bacteria 4007
164 Ga0207709_10130748 3300025935 Bacteria 1711
165 Ga0207704_10352882 3300025938 Unclassified 1146
166 Ga0207691_10482124 3300025940 Unclassified 1054
167 Ga0207711_10023762 3300025941 Bacteria 5131
168 Ga0207667_10042237 3300025949 Bacteria 4848
169 Ga0207667_10127562 3300025949 Bacteria 2621
170 Ga0207651_10030833 3300025960 Bacteria 3420
171 Ga0207668_10259151 3300025972 Bacteria 1416
172 Ga0207658_10017299 3300025986 Bacteria 4966
173 Ga0207658_10273158 3300025986 Unclassified 1446
174 Ga0207703_10272496 3300026035 Unclassified 1534
175 Ga0207708_10104580 3300026075 Bacteria 2194
176 Ga0207702_10139164 3300026078 Bacteria 2194
177 Ga0207641_10139792 3300026088 Bacteria 2183
178 Ga0207641_10228104 3300026088 Unclassified 1730
179 Ga0207648_10099025 3300026089 Bacteria 2553
180 Ga0207676_10198472 3300026095 Unclassified 1771
181 Ga0207675_100454238 3300026118 Unclassified 1270
182 Ga0207683_10094463 3300026121 Bacteria 2665
183 Ga0268265_10010564 3300028380 Bacteria 6236
184 Ga0268265_10022794 3300028380 Bacteria 4405
185 Ga0268264_10013985 3300028381 Bacteria 6597
186 Ga0265760_10005661 3300031090 Bacteria 3576
187 Ga0265330_10002055 3300031235 Bacteria 11142
188 Ga0265332_10000106 3300031238 Bacteria 71076
189 Ga0265328_10001188 3300031239 Bacteria 12048
190 Ga0265320_10013564 3300031240 Unclassified 4681
191 Ga0265329_10007388 3300031242 Unclassified 4259
192 Ga0265340_10015741 3300031247 Unclassified 3926
193 Ga0265339_10062493 3300031249 Unclassified 2002
194 Ga0265331_10000074 3300031250 Bacteria 149282
195 Ga0265327_10000710 3300031251 Bacteria 52598
196 Ga0265327_10042889 3300031251 Unclassified 2426
197 Ga0265316_10000037 3300031344 Bacteria 149295
198 Ga0265316_10001358 3300031344 Bacteria 26340
199 Ga0265314_10000248 3300031711 Bacteria 79300
200 Ga0265342_10001073 3300031712 Bacteria 26564
201 Ga0307405_10030386 3300031731 Bacteria 3167
202 Ga0307413_10028825 3300031824 Bacteria 3098
203 Ga0307410_10029552 3300031852 Bacteria 3491
204 Ga0307406_10226590 3300031901 Unclassified 1393
205 Ga0307407_10136408 3300031903 Bacteria 1577
206 Ga0307412_10014949 3300031911 Bacteria 4590
207 Ga0307409_100006305 3300031995 Bacteria 6951
208 Ga0307416_100007093 3300032002 Bacteria 7081
209 Ga0307416_100101089 3300032002 Bacteria 2510
210 Ga0307411_10349253 3300032005 Bacteria 1205
211 Ga0307415_100032893 3300032126 Bacteria 3359
212 Ga0373961_0000339 3300035241 Bacteria 20585
213 Ga0373937_0067232 3300036401 Unclassified 3302
214 Ga0373937_0264945 3300036401 Bacteria 1621
215 Ga0373925_0252727 3300037068 Unclassified 1414
216 Ga0395901_0041884 3300038443 Bacteria 4747
217 Ga0436365_0995475 3300039437 Bacteria 28903
218 Ga0436365_1858586 3300039437 Bacteria 166193
219 Ga0436363_0538127 3300039450 Bacteria 2448
220 Ga0436362_1035670 3300039453 Bacteria 125910
221 Ga0436362_1225749 3300039453 Unclassified 2891
222 Ga0439432_077504 3300042006 Bacteria 1009
223 Ga0439435_0004024 3300042436 Bacteria 3127
224 Ga0495592_0059362 3300046454 Bacteria 2817
225 Ga0495653_0000005 3300046463 Bacteria 367438
226 Ga0495653_0070458 3300046463 Bacteria 2617
227 Ga0495650_0025659 3300046471 Bacteria 2756
228 Ga0495664_0156272 3300046477 Bacteria 1384
229 Ga0495606_0000381 3300046507 Bacteria 75386
230 Ga0495606_0000422 3300046507 Bacteria 70719
231 Ga0495608_0010827 3300046511 Bacteria 6357
232 Ga0495610_0000380 3300046512 Bacteria 45916
233 Ga0495610_0008726 3300046512 Bacteria 6515
234 Ga0495618_0177896 3300046514 Bacteria 1352
235 Ga0495630_0210116 3300046517 Bacteria 1485
236 Ga0495643_0000011 3300046522 Bacteria 324745
237 Ga0495648_0047394 3300046524 Bacteria 2656
238 Ga0495652_0060166 3300046529 Bacteria 3211
239 Ga0495640_0014764 3300046533 Bacteria 5900
240 Ga0495597_0002722 3300046542 Bacteria 10900
241 Ga0495645_0039057 3300046543 Bacteria 3462
242 Ga0495667_0023289 3300046559 Bacteria 4172
243 Ga0495634_0135331 3300046642 Bacteria 1568
244 Ga0495625_0002956 3300046660 Bacteria 17697
245 Ga0495625_0014419 3300046660 Bacteria 6309
246 Ga0495625_0142230 3300046660 Bacteria 1618
247 Ga0495635_0012470 3300046663 Bacteria 5955
248 Ga0495623_0015398 3300046679 Bacteria 4943
249 Ga0495671_0024909 3300046692 Bacteria 3113
250 Ga0495649_0004276 3300046694 Bacteria 9366
251 Ga0495600_0004194 3300046809 Bacteria 8601
252 Ga0495604_0013353 3300047317 Bacteria 6541
253 Ga0495674_0001117 3300047319 Bacteria 25814
254 Ga0495674_0307202 3300047319 Unclassified 1295
255 Ga0495672_0000369 3300047320 Bacteria 56889
256 Ga0495680_0011996 3300047322 Bacteria 7648
257 Ga0495675_0002979 3300047444 Bacteria 10165
258 Ga0495679_035740 3300047446 Bacteria 1573
259 Ga0495673_0055165 3300047469 Bacteria 1725
260 Ga0495684_0007749 3300047471 Bacteria 8313
261 Ga0495615_0022113 3300048090 Bacteria 1442
262 Ga0496103_0002104 3300048906 Bacteria 12696
263 Ga0496109_0128719 3300048912 Bacteria 2362
264 Ga0496114_0068483 3300048917 Bacteria 2980
265 Ga0496120_0034204 3300048923 Bacteria 3047
266 Ga0496123_0024501 3300048926 Bacteria 4583
267 Ga0496124_0073448 3300048927 Bacteria 2830
268 Ga0496124_0429722 3300048927 Bacteria 907
269 Ga0495678_000630 3300049459 Bacteria 32774
270 Ga0501032_0125367 3300049569 Bacteria 1697
271 Ga0501034_0030048 3300049571 Bacteria 5524
272 Ga0501034_0053340 3300049571 Bacteria 4072
273 Ga0501034_0136302 3300049571 Bacteria 2436
274 Ga0501034_0543108 3300049571 Bacteria 1072
275 Ga0501048_0239398 3300049582 Bacteria 1288
276 Ga0501074_0282053 3300049590 Bacteria 1181
277 Ga0501075_0120203 3300049591 Bacteria 1999
278 Ga0501076_0041629 3300049592 Bacteria 3615
279 Ga0501269_000018 3300049766 Bacteria 56999
280 nmdc:mga05p37_4505_c1 3300050507 Bacteria 16283
281 nmdc:mga05p37_51397_c1 3300050507 Bacteria 5068
282 nmdc:mga05p37_6876_c1 3300050507 Bacteria 13409
283 nmdc:mga0qj67_210419_c1 3300050509 Bacteria 1580
284 nmdc:mga06r32_104070_c1 3300050510 Bacteria 2788
285 nmdc:mga06r32_870_c1 3300050510 Bacteria 26859
286 nmdc:mga08y16_17175_c1 3300050511 Bacteria 7617
287 nmdc:mga0n895_44478_c1 3300050512 Bacteria 4330
288 nmdc:mga08x19_39298_c1 3300050514 Unclassified 3008
289 nmdc:mga0a205_5723_c1 3300050515 Bacteria 11202
290 Ga0495612_0068799 3300053078 Bacteria 1474
291 Ga0495595_0115236 3300053084 Bacteria 1306
292 Ga0500559_0000568 3300053136 Bacteria 25600
293 Ga0501084_0268527 3300054114 Bacteria 1440
294 Ga0590071_007209 3300059421 Bacteria 2633
295 Ga0590074_002662 3300059423 Bacteria 2934
296 Ga0590075_002186 3300059424 Bacteria 4701
297 Ga0590077_015073 3300059426 Bacteria 1613
298 2821132352 2821131069 Bacteria 6108407
299 2842713344 2842711865 Bacteria 7155354
300 2857561470 2857558681 Bacteria 6617694
301 2857569845 2857564685 Bacteria 6290584
302 2885081708 2885080285 Bacteria 6355622
303 2904424910 2904424332 Bacteria 7633521
304 2939615141 2939611941 Bacteria 3892017
305 Ga0207646_10096390
306 MRS1b_contig_3469457
307 JGI25154J39366_1000693
308 rootH1_10068600
309 rootL2_10003659
310 rootL2_10003660
311 Ga0065712_10068294
312 Ga0070658_10000001
313 Ga0070658_10214213
314 Ga0070676_10200043
315 Ga0070683_100104965
316 Ga0070690_100193023
317 Ga0070670_100126203
318 Ga0070666_10061380
319 Ga0070666_10174673
320 Ga0068868_100157932
321 Ga0070660_100008854
322 Ga0070687_100134300
323 Ga0070692_10008759
324 Ga0070675_100000089
325 Ga0070675_100000799
326 Ga0070671_100066421
327 Ga0070671_100214428
328 Ga0070673_100351000
329 Ga0070659_100275461
330 Ga0070667_100024445
331 Ga0070714_100000135
332 Ga0070713_100222401
333 Ga0070711_100346104
334 Ga0070705_100039784
335 Ga0070694_100110230
336 Ga0070681_10005808
337 Ga0070681_10019557
338 Ga0070681_10201463
339 Ga0068867_100165689
340 Ga0070706_100149740
341 Ga0070706_100231211
342 Ga0070707_100106455
343 Ga0070698_100002000
344 Ga0070698_100115333
345 Ga0070698_100178916
346 Ga0070699_100136472
347 Ga0070684_100109945
348 Ga0070697_100075703
349 Ga0070697_100150583
350 Ga0070697_100446098
351 Ga0070696_100002297
352 Ga0070693_100042087
353 Ga0070665_100033331
354 Ga0068859_100070300
355 Ga0068861_100107518
356 Ga0068861_100330191
357 Ga0068870_10048230
358 Ga0068863_100155257
359 Ga0068858_100159297
360 Ga0068860_100007784
361 Ga0068860_100020616
362 Ga0068860_100459201
363 Ga0068862_100008336
364 Ga0068862_100011870
365 Ga0081539_10011005
366 Ga0070715_10176810
367 Ga0070712_100003499
368 Ga0068871_100129433
369 Ga0075428_100006489
370 Ga0075428_100073310
371 Ga0075431_100000103
372 Ga0075433_10056069
373 Ga0075434_100012902
374 Ga0075434_100468456
375 Ga0075429_100149363
376 Ga0075429_100229538
377 Ga0075436_100000640
378 Ga0097620_100070300
379 Ga0079104_1008442
380 Ga0105240_10019757
381 Ga0105240_10163311
382 Ga0105240_10517703
383 Ga0111539_10212422
384 Ga0105245_10800491
385 Ga0114129_10000083
386 Ga0114129_10006620
387 Ga0114129_10009900
388 Ga0114129_10074824
389 Ga0105243_10006785
390 Ga0105243_10035112
391 Ga0105241_10229260
392 Ga0105242_10044901
393 Ga0105242_10062552
394 Ga0105248_10000936
395 Ga0105248_10084297
396 Ga0105248_10089073
397 Ga0105248_10480561
398 Ga0105248_10600318
399 Ga0105237_10008530
400 Ga0105238_10083830
401 Ga0105238_10207641
402 Ga0105239_10056384
403 Ga0105246_10059589
404 Ga0105246_10224256
405 Ga0157370_10023234
406 Ga0157370_10077142
407 Ga0157369_10005415
408 Ga0157378_10025938
409 Ga0157378_10166992
410 Ga0157378_10277953
411 Ga0157378_10441699
412 Ga0163162_10054274
413 Ga0163162_10074125
414 Ga0163162_10106101
415 Ga0163162_10451911
416 Ga0163162_10491207
417 Ga0163162_10512317
418 Ga0157372_10246702
419 Ga0157375_10087244
420 Ga0157375_10093157
421 Ga0157375_10110704
422 Ga0157375_10484278
423 Ga0157375_10878062
424 Ga0163163_10033000
425 Ga0157380_10040365
426 Ga0157380_10301048
427 Ga0157379_10021907
428 Ga0157376_10083690
429 Ga0157376_10088497
430 Ga0182007_10031133
431 Ga0182005_1000022
432 Ga0163161_10173227
433 Ga0206354_10457912
434 Ga0206353_11997182
435 Ga0213873_10000008
436 Ga0213876_10000005
437 Ga0213876_10000542
438 Ga0209437_102285
439 Ga0209646_1000054
440 Ga0209026_1012077
441 Ga0207680_10115950
442 Ga0207680_10316935
443 Ga0207647_10000133
444 Ga0207645_10084843
445 Ga0207645_10094780
446 Ga0207643_10016702
447 Ga0207705_10000002
448 Ga0207684_10042414
449 Ga0207707_10024461
450 Ga0207695_10256351
451 Ga0207693_10014434
452 Ga0207660_10069143
453 Ga0207662_10137207
454 Ga0207657_10000589
455 Ga0207657_10017176
456 Ga0207657_10023817
457 Ga0207649_10062107
458 Ga0207694_10080823
459 Ga0207659_10000229
460 Ga0207659_10000395
461 Ga0207664_10000129
462 Ga0207664_10268272
463 Ga0207644_10050834
464 Ga0207690_10000442
465 Ga0207690_10002370
466 Ga0207690_10231046
467 Ga0207706_10042935
468 Ga0207709_10130748
469 Ga0207704_10352882
470 Ga0207691_10482124
471 Ga0207711_10023762
472 Ga0207667_10042237
473 Ga0207667_10127562
474 Ga0207651_10030833
475 Ga0207668_10259151
476 Ga0207658_10017299
477 Ga0207658_10273158
478 Ga0207703_10272496
479 Ga0207708_10104580
480 Ga0207702_10139164
481 Ga0207641_10139792
482 Ga0207641_10228104
483 Ga0207648_10099025
484 Ga0207676_10198472
485 Ga0207675_100454238
486 Ga0207683_10094463
487 Ga0268265_10010564
488 Ga0268265_10022794
489 Ga0268264_10013985
490 Ga0265760_10005661
491 Ga0265330_10002055
492 Ga0265332_10000106
493 Ga0265328_10001188
494 Ga0265320_10013564
495 Ga0265329_10007388
496 Ga0265340_10015741
497 Ga0265339_10062493
498 Ga0265331_10000074
499 Ga0265327_10000710
500 Ga0265327_10042889
501 Ga0265316_10000037
502 Ga0265316_10001358
503 Ga0265314_10000248
504 Ga0265342_10001073
505 Ga0307405_10030386
506 Ga0307413_10028825
507 Ga0307410_10029552
508 Ga0307406_10226590
509 Ga0307407_10136408
510 Ga0307412_10014949
511 Ga0307409_100006305
512 Ga0307416_100007093
513 Ga0307416_100101089
514 Ga0307411_10349253
515 Ga0307415_100032893
516 Ga0373961_0000339
517 Ga0373937_0067232
518 Ga0373937_0264945
519 Ga0373925_0252727
520 Ga0395901_0041884
521 Ga0436365_0995475
522 Ga0436365_1858586
523 Ga0436363_0538127
524 Ga0436362_1035670
525 Ga0436362_1225749
526 Ga0439432_077504
527 Ga0439435_0004024
528 Ga0495592_0059362
529 Ga0495653_0000005
530 Ga0495653_0070458
531 Ga0495650_0025659
532 Ga0495664_0156272
533 Ga0495606_0000381
534 Ga0495606_0000422
535 Ga0495608_0010827
536 Ga0495610_0000380
537 Ga0495610_0008726
538 Ga0495618_0177896
539 Ga0495630_0210116
540 Ga0495643_0000011
541 Ga0495648_0047394
542 Ga0495652_0060166
543 Ga0495640_0014764
544 Ga0495597_0002722
545 Ga0495645_0039057
546 Ga0495667_0023289
547 Ga0495634_0135331
548 Ga0495625_0002956
549 Ga0495625_0014419
550 Ga0495625_0142230
551 Ga0495635_0012470
552 Ga0495623_0015398
553 Ga0495671_0024909
554 Ga0495649_0004276
555 Ga0495600_0004194
556 Ga0495604_0013353
557 Ga0495674_0001117
558 Ga0495674_0307202
559 Ga0495672_0000369
560 Ga0495680_0011996
561 Ga0495675_0002979
562 Ga0495679_035740
563 Ga0495673_0055165
564 Ga0495684_0007749
565 Ga0495615_0022113
566 Ga0496103_0002104
567 Ga0496109_0128719
568 Ga0496114_0068483
569 Ga0496120_0034204
570 Ga0496123_0024501
571 Ga0496124_0073448
572 Ga0496124_0429722
573 Ga0495678_000630
574 Ga0501032_0125367
575 Ga0501034_0030048
576 Ga0501034_0053340
577 Ga0501034_0136302
578 Ga0501034_0543108
579 Ga0501048_0239398
580 Ga0501074_0282053
581 Ga0501075_0120203
582 Ga0501076_0041629
583 Ga0501269_000018
584 nmdc:mga05p37_4505_c1
585 nmdc:mga05p37_51397_c1
586 nmdc:mga05p37_6876_c1
587 nmdc:mga0qj67_210419_c1
588 nmdc:mga06r32_104070_c1
589 nmdc:mga06r32_870_c1
590 nmdc:mga08y16_17175_c1
591 nmdc:mga0n895_44478_c1
592 nmdc:mga08x19_39298_c1
593 nmdc:mga0a205_5723_c1
594 Ga0495612_0068799
595 Ga0495595_0115236
596 Ga0500559_0000568
597 Ga0501084_0268527
598 Ga0590071_007209
599 Ga0590074_002662
600 Ga0590075_002186
601 Ga0590077_015073
602 2821132352
603 2842713344
604 2857561470
605 2857569845
606 2885081708
607 2904424910
608 2939615141

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11959

DUF3473

Domain of unknown function (DUF3473)

156

285

0.98

PF01522

Polysacc_deac_1

Polysaccharide deacetylase

29

148

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6dq3-assembly2.cif.gz_B streptococcus pyogenes deacetylase ppld in complex with acetate 0.8603 46 148
5bu6-assembly1.cif.gz_A structure of bpsb deaceylase domain from bordetella bronchiseptica 0.7872 44 149
2c1g-assembly1.cif.gz_A structure of streptococcus pneumoniae peptidoglycan deacetylase (sppgda) 0.7542 4 277
2j13-assembly1.cif.gz_A structure of a family 4 carbohydrate esterase from bacillus anthracis 0.7496 9 281
2cc0-assembly1.cif.gz_B family 4 carbohydrate esterase from streptomyces lividans in complex with acetate 0.7426 4 275
ID Description Score Start End Superfamily
5bu6B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.7706 44 149 3.20.20.370
af_Q06702_109_291_3.20.20.370 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.7563 9 277 3.20.20.370
2j13A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.7496 9 281 3.20.20.370
2cc0B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.7426 4 275 3.20.20.370
af_Q06702_109_291_3.20.20.370 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.7373 9 277 3.20.20.370
ID Description Score Start End GO Terms
AF-A0A7V4XDE7-F1-model_v4 Polysaccharide deacetylase family protein 0.9887 5 161 GO:0005975
GO:0016810
AF-A0A3M1CSG9-F1-model_v4 DUF3473 domain-containing protein 0.9862 40 285 GO:0005975
GO:0016810
AF-A0A7C2Z2X5-F1-model_v4 DUF3473 domain-containing protein 0.9761 4 284 GO:0005975
GO:0016810
AF-A0A1H4B8Y3-F1-model_v4 Polysaccharide deacetylase family protein, PEP-CTERM locus subfamily 0.9757 6 280 GO:0005975
GO:0016810
AF-A0A537MKK4-F1-model_v4 Chitooligosaccharide deacetylase (Nodulation protein B) 0.9744 6 280 GO:0005975
GO:0016810

Map