F397635

General Info

Members Datasets Scaffolds Average Seq Length
304 185 300 280

Family's Representative Sequence

Representative Sequence 3300026121|Ga0207683_10101630|Ga0207683_101016302
Length 322
Sequence MQATSLHHYSACNSIVSSIFENCTDFIFGSFFTFQLFSMKWITRERPKIDRIACPWLIKNFVDKDAEFIYTRADKVKEDAKKINAIPFDIPDVEFSHHEDKCTFDYIIEKYKLKDPSLQTLATIVRGADTDRHDIASQASGLWAISAGLSYNIKDDYELLQKGMMLYDALYSWAKHLQKEKHTQNPVDHIFIDVYNKYIKQKSVQKKTPHWVKELKQIIQDQVDTNLSLTNISKSLDINPSYLSREFSKHFNNLSFGEYIRKLRIEKAIDLIQQNKYSLTEIAYLTGFSDQSHFTRIFKQHTGKSPSGYKKEMKKSKADTKG

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2818991437 Pedobacter terrae 518 Isolate Unclassified
3 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
4 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
7 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
8 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
9 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
10 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
11 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
12 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
13 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
14 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
15 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
19 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
20 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
21 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
22 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
23 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
24 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
25 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
26 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
27 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
28 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
29 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
30 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
31 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
32 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
33 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
34 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
35 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
38 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
39 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
40 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
41 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
42 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
43 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
44 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
45 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
46 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
47 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
48 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
49 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
50 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
51 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
52 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
53 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
54 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
55 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
56 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
57 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
58 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
59 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
60 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
61 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
62 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
63 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
64 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
65 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
66 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
68 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
69 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
70 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
71 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
72 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
73 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
74 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
75 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
76 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
77 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
78 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
79 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
80 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
81 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
82 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
83 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
84 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
85 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
86 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
87 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
88 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
89 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
90 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
91 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
92 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
93 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
94 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
95 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
96 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
97 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
98 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
99 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
100 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
101 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
102 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
103 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
104 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
106 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
107 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
147 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
148 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
152 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
153 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
154 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
155 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
156 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
157 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
158 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
159 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
160 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
161 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
162 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
163 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
164 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
165 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
166 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
167 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
168 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
169 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
170 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
171 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
172 3300049683 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control Metagenome Rhizosphere
173 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
174 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
177 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
178 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
179 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
180 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
181 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
182 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
183 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
184 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
185 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.68
Metatranscriptomes 0
Isolates 1.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.22
Nodule 0
Rhizoplane 0
Rhizosphere 85.86
Stem 0
Stem Tuber 0
Unclassified 5.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10032277 3300001990 Bacteria 1631
2 JGI24744J21845_10007694 3300002077 Unclassified 2226
3 JGI25152J39213_1000704 3300002773 Bacteria 17328
4 JGI25150J39212_1000005 3300002774 Bacteria 311800
5 JGI25151J46595_10000004 3300003187 Bacteria 494006
6 JGI25153J46596_10000004 3300003215 Bacteria 494006
7 rootH1_10008657 3300003316 Bacteria 22351
8 rootH1_10030923 3300003316 Bacteria 5846
9 rootH1_10183589 3300003316 Bacteria 2154
10 rootH2_10074509 3300003320 Unclassified 1381
11 rootL2_10030290 3300003322 Bacteria 7640
12 rootL2_10334980 3300003322 Bacteria 2183
13 rootH1_10000778 3300003323 Bacteria 106851
14 rootH1_10008115 3300003323 Bacteria 5601
15 rootH1_10084095 3300003323 Unclassified 3482
16 Ga0055536_1000012 3300003781 Bacteria 263217
17 Ga0055536_1007810 3300003781 Bacteria 4720
18 Ga0055531_10000118 3300003794 Bacteria 88104
19 Ga0065165_1000628 3300005262 Bacteria 51270
20 Ga0065714_10064492 3300005288 Bacteria 49867
21 Ga0065714_10073397 3300005288 Bacteria 3171
22 Ga0065714_10117902 3300005288 Bacteria 1385
23 Ga0065712_10002588 3300005290 Bacteria 4696
24 Ga0065707_10138814 3300005295 Unclassified 1801
25 Ga0070658_10320762 3300005327 Bacteria 1323
26 Ga0070676_10002132 3300005328 Bacteria 10078
27 Ga0070670_100201900 3300005331 Bacteria 1728
28 Ga0068869_100169809 3300005334 Bacteria 1703
29 Ga0068869_100181091 3300005334 Unclassified 1652
30 Ga0070682_100166166 3300005337 Bacteria 1529
31 Ga0068868_100016014 3300005338 Bacteria 5560
32 Ga0068868_100155623 3300005338 Unclassified 1885
33 Ga0070689_100108096 3300005340 Bacteria 2209
34 Ga0070692_10295541 3300005345 Bacteria 987
35 Ga0070668_100018278 3300005347 Bacteria 5261
36 Ga0070669_100041631 3300005353 Unclassified 3341
37 Ga0070669_100056693 3300005353 Bacteria 2873
38 Ga0070669_100240047 3300005353 Bacteria 1439
39 Ga0070675_100003096 3300005354 Bacteria 12570
40 Ga0070671_100265726 3300005355 Bacteria 1458
41 Ga0070674_100026795 3300005356 Unclassified 3769
42 Ga0070673_100004586 3300005364 Bacteria 8761
43 Ga0070688_100033057 3300005365 Bacteria 3124
44 Ga0070667_100012291 3300005367 Bacteria 7083
45 Ga0070667_100535620 3300005367 Bacteria 1075
46 Ga0070701_10030329 3300005438 Bacteria 2674
47 Ga0070700_100144101 3300005441 Bacteria 1622
48 Ga0070694_100092649 3300005444 Bacteria 2123
49 Ga0070678_100004411 3300005456 Bacteria 7976
50 Ga0070662_100074518 3300005457 Bacteria 2511
51 Ga0070681_10086542 3300005458 Bacteria 3087
52 Ga0068867_100009802 3300005459 Bacteria 6750
53 Ga0068867_100102244 3300005459 Bacteria 2190
54 Ga0070685_10107080 3300005466 Unclassified 1716
55 Ga0070698_100001455 3300005471 Bacteria 26296
56 Ga0070699_100050490 3300005518 Bacteria 3601
57 Ga0070679_100023465 3300005530 Bacteria 6039
58 Ga0068853_100017893 3300005539 Bacteria 5856
59 Ga0070672_100007653 3300005543 Bacteria 7350
60 Ga0070672_100022422 3300005543 Bacteria 4639
61 Ga0070672_100182814 3300005543 Bacteria 1748
62 Ga0070665_100014393 3300005548 Bacteria 7939
63 Ga0070665_100121723 3300005548 Bacteria 2611
64 Ga0068855_100048317 3300005563 Bacteria 5023
65 Ga0068855_100072520 3300005563 Bacteria 4002
66 Ga0068855_100175754 3300005563 Bacteria 2423
67 Ga0070664_100141628 3300005564 Bacteria 2118
68 Ga0068857_100016370 3300005577 Bacteria 6497
69 Ga0068857_100056041 3300005577 Bacteria 3497
70 Ga0068857_100177466 3300005577 Unclassified 1938
71 Ga0068854_100007715 3300005578 Bacteria 6879
72 Ga0068854_100024051 3300005578 Bacteria 4167
73 Ga0068856_100022042 3300005614 Bacteria 6194
74 Ga0068856_100073918 3300005614 Bacteria 3375
75 Ga0070702_100195196 3300005615 Bacteria 1335
76 Ga0068852_100005385 3300005616 Bacteria 9149
77 Ga0068852_100026803 3300005616 Bacteria 4690
78 Ga0068859_100000859 3300005617 Bacteria 30939
79 Ga0068859_100019507 3300005617 Bacteria 6812
80 Ga0068859_100042919 3300005617 Bacteria 4543
81 Ga0068859_100447814 3300005617 Bacteria 1387
82 Ga0068864_100071327 3300005618 Unclassified 3024
83 Ga0068864_100091659 3300005618 Unclassified 2682
84 Ga0068864_100105976 3300005618 Unclassified 2499
85 Ga0068866_10008613 3300005718 Bacteria 4308
86 Ga0068861_100020375 3300005719 Bacteria 4750
87 Ga0068870_10017874 3300005840 Bacteria 3412
88 Ga0068870_10045639 3300005840 Unclassified 2295
89 Ga0068863_100161647 3300005841 Bacteria 2146
90 Ga0068863_100288655 3300005841 Bacteria 1590
91 Ga0068860_100010537 3300005843 Bacteria 9135
92 Ga0068860_100013144 3300005843 Bacteria 8124
93 Ga0068860_100016634 3300005843 Bacteria 7174
94 Ga0068860_100036266 3300005843 Bacteria 4726
95 Ga0068862_100010083 3300005844 Bacteria 7799
96 Ga0068862_100014984 3300005844 Bacteria 6438
97 Ga0068862_100122119 3300005844 Unclassified 2297
98 Ga0097621_100009954 3300006237 Bacteria 6930
99 Ga0068871_100018635 3300006358 Bacteria 5282
100 Ga0068871_100221290 3300006358 Unclassified 1640
101 Ga0075428_100001878 3300006844 Bacteria 22540
102 Ga0075428_100139375 3300006844 Bacteria 2637
103 Ga0075431_100052698 3300006847 Bacteria 4195
104 Ga0075434_100050594 3300006871 Bacteria 4128
105 Ga0075429_100001931 3300006880 Bacteria 17186
106 Ga0075429_100063200 3300006880 Bacteria 3226
107 Ga0068865_100035586 3300006881 Unclassified 3350
108 Ga0097620_100000859 3300006931 Bacteria 30939
109 Ga0097620_100019508 3300006931 Bacteria 6812
110 Ga0097620_100042919 3300006931 Bacteria 4543
111 Ga0097620_100447816 3300006931 Bacteria 1387
112 Ga0105244_10065888 3300009036 Bacteria 1814
113 Ga0105240_10000276 3300009093 Bacteria 101817
114 Ga0105240_10022734 3300009093 Bacteria 8307
115 Ga0105240_10035065 3300009093 Bacteria 6470
116 Ga0105240_10042267 3300009093 Bacteria 5809
117 Ga0111539_10037349 3300009094 Bacteria 5866
118 Ga0105245_10268629 3300009098 Unclassified 1663
119 Ga0105247_10015701 3300009101 Bacteria 4534
120 Ga0114129_10000629 3300009147 Bacteria 43924
121 Ga0114129_10755760 3300009147 Bacteria 1244
122 Ga0105241_10003332 3300009174 Bacteria 11954
123 Ga0105241_10095562 3300009174 Unclassified 2353
124 Ga0105241_10118181 3300009174 Unclassified 2131
125 Ga0105242_10142300 3300009176 Bacteria 2083
126 Ga0105242_10295106 3300009176 Unclassified 1477
127 Ga0105237_10000126 3300009545 Bacteria 107192
128 Ga0105237_10000834 3300009545 Bacteria 42106
129 Ga0105237_10001234 3300009545 Bacteria 34083
130 Ga0105237_10003848 3300009545 Bacteria 17652
131 Ga0105238_10001229 3300009551 Bacteria 25762
132 Ga0105238_10006854 3300009551 Bacteria 11376
133 Ga0105249_10003302 3300009553 Bacteria 13975
134 Ga0105249_10399051 3300009553 Unclassified 1405
135 Ga0105239_10004257 3300010375 Bacteria 17178
136 Ga0105239_10010422 3300010375 Bacteria 10396
137 Ga0105246_10007130 3300011119 Bacteria 6843
138 Ga0157373_10003053 3300013100 Bacteria 12635
139 Ga0157373_10057481 3300013100 Bacteria 2759
140 Ga0157371_10001510 3300013102 Bacteria 24040
141 Ga0157371_10157507 3300013102 Bacteria 1621
142 Ga0157370_10001708 3300013104 Bacteria 27039
143 Ga0157370_10012534 3300013104 Bacteria 8789
144 Ga0157370_10027576 3300013104 Bacteria 5599
145 Ga0157369_10024217 3300013105 Bacteria 6756
146 Ga0157374_10074831 3300013296 Bacteria 3199
147 Ga0157374_10161939 3300013296 Unclassified 2179
148 Ga0157374_10256958 3300013296 Bacteria 1720
149 Ga0157378_10072948 3300013297 Unclassified 3085
150 Ga0157378_10087626 3300013297 Unclassified 2824
151 Ga0157378_10097841 3300013297 Bacteria 2675
152 Ga0163162_10056196 3300013306 Unclassified 3965
153 Ga0163162_10148367 3300013306 Bacteria 2462
154 Ga0157372_10000376 3300013307 Bacteria 49449
155 Ga0157372_10000674 3300013307 Bacteria 37597
156 Ga0157372_10015773 3300013307 Bacteria 8106
157 Ga0157375_10028187 3300013308 Bacteria 5260
158 Ga0157375_10055743 3300013308 Bacteria 3898
159 Ga0157375_10077968 3300013308 Bacteria 3345
160 Ga0157375_10851787 3300013308 Bacteria 1058
161 Ga0163163_10222446 3300014325 Bacteria 1936
162 Ga0163163_10343016 3300014325 Bacteria 1549
163 Ga0157380_10001323 3300014326 Bacteria 16093
164 Ga0157377_10007647 3300014745 Bacteria 5232
165 Ga0157377_10346647 3300014745 Bacteria 995
166 Ga0157379_10193690 3300014968 Unclassified 1837
167 Ga0157376_10011727 3300014969 Bacteria 6472
168 Ga0157376_10633862 3300014969 Unclassified 1067
169 Ga0163161_10206924 3300017792 Bacteria 1514
170 Ga0163161_10306130 3300017792 Bacteria 1253
171 Ga0207425_1000008 3300025245 Bacteria 618024
172 Ga0209129_1000040 3300025258 Bacteria 313043
173 Ga0209676_1000806 3300025292 Bacteria 41091
174 Ga0209025_1000020 3300025294 Bacteria 618024
175 Ga0209758_1000022 3300025297 Bacteria 618024
176 Ga0209257_1000007 3300025304 Bacteria 1564415
177 Ga0209257_1017503 3300025304 Bacteria 2817
178 Ga0207697_10007748 3300025315 Bacteria 4760
179 Ga0207697_10059343 3300025315 Unclassified 1590
180 Ga0207710_10001312 3300025900 Bacteria 12562
181 Ga0207688_10018519 3300025901 Bacteria 3788
182 Ga0207688_10129294 3300025901 Bacteria 1479
183 Ga0207647_10026465 3300025904 Bacteria 3795
184 Ga0207645_10004292 3300025907 Bacteria 10577
185 Ga0207643_10023636 3300025908 Bacteria 3389
186 Ga0207643_10049537 3300025908 Unclassified 2381
187 Ga0207705_10306264 3300025909 Bacteria 1219
188 Ga0207654_10178650 3300025911 Unclassified 1383
189 Ga0207654_10217266 3300025911 Unclassified 1266
190 Ga0207707_10040080 3300025912 Bacteria 4093
191 Ga0207695_10001001 3300025913 Bacteria 50058
192 Ga0207695_10001186 3300025913 Bacteria 44969
193 Ga0207671_10004690 3300025914 Bacteria 12926
194 Ga0207671_10018022 3300025914 Bacteria 5429
195 Ga0207652_10132757 3300025921 Bacteria 2222
196 Ga0207681_10003649 3300025923 Bacteria 9570
197 Ga0207681_10127692 3300025923 Bacteria 1875
198 Ga0207681_10222699 3300025923 Unclassified 1460
199 Ga0207694_10127499 3300025924 Bacteria 2037
200 Ga0207650_10225229 3300025925 Bacteria 1510
201 Ga0207659_10019217 3300025926 Bacteria 4492
202 Ga0207706_10112023 3300025933 Bacteria 2401
203 Ga0207706_10206215 3300025933 Bacteria 1724
204 Ga0207686_10081553 3300025934 Bacteria 2112
205 Ga0207686_10234160 3300025934 Unclassified 1333
206 Ga0207670_10141438 3300025936 Bacteria 1775
207 Ga0207669_10036218 3300025937 Unclassified 2817
208 Ga0207691_10009989 3300025940 Bacteria 9116
209 Ga0207691_10145149 3300025940 Bacteria 2089
210 Ga0207689_10001087 3300025942 Bacteria 26206
211 Ga0207689_10057162 3300025942 Bacteria 3210
212 Ga0207689_10164255 3300025942 Bacteria 1829
213 Ga0207689_10319087 3300025942 Bacteria 1289
214 Ga0207679_10463638 3300025945 Bacteria 1125
215 Ga0207667_10001285 3300025949 Bacteria 31480
216 Ga0207667_10020105 3300025949 Bacteria 7435
217 Ga0207651_10009308 3300025960 Bacteria 5367
218 Ga0207712_10061324 3300025961 Bacteria 2669
219 Ga0207668_10013350 3300025972 Bacteria 5054
220 Ga0207668_10444178 3300025972 Bacteria 1105
221 Ga0207658_10192863 3300025986 Unclassified 1695
222 Ga0207703_10196176 3300026035 Bacteria 1791
223 Ga0207639_10026221 3300026041 Bacteria 4234
224 Ga0207639_10155732 3300026041 Bacteria 1919
225 Ga0207639_10240765 3300026041 Unclassified 1573
226 Ga0207708_10152049 3300026075 Bacteria 1823
227 Ga0207702_10017156 3300026078 Bacteria 5989
228 Ga0207702_10251590 3300026078 Unclassified 1660
229 Ga0207641_10029074 3300026088 Bacteria 4570
230 Ga0207676_10044960 3300026095 Unclassified 3409
231 Ga0207676_10049853 3300026095 Unclassified 3261
232 Ga0207674_10020047 3300026116 Bacteria 7232
233 Ga0207674_10024798 3300026116 Bacteria 6402
234 Ga0207674_10126461 3300026116 Bacteria 2522
235 Ga0207674_10171908 3300026116 Unclassified 2120
236 Ga0207675_100007215 3300026118 Bacteria 10498
237 Ga0207675_100076961 3300026118 Bacteria 3125
238 Ga0207675_100412930 3300026118 Bacteria 1332
239 Ga0207683_10001021 3300026121 Bacteria 25523
240 Ga0207683_10101630 3300026121 Bacteria 2567
241 Ga0207698_10006655 3300026142 Bacteria 7222
242 Ga0207698_10044188 3300026142 Bacteria 3345
243 Ga0209998_10042454 3300027717 Unclassified 1036
244 Ga0207428_10023533 3300027907 Bacteria 5180
245 Ga0268266_10113945 3300028379 Unclassified 2398
246 Ga0268265_10065939 3300028380 Unclassified 2797
247 Ga0268265_10496956 3300028380 Bacteria 1149
248 Ga0268264_10006309 3300028381 Bacteria 10000
249 Ga0268264_10050430 3300028381 Unclassified 3465
250 Ga0268264_10065650 3300028381 Unclassified 3058
251 Ga0268264_10208566 3300028381 Unclassified 1792
252 Ga0307515_10000003 3300028794 Bacteria 891317
253 Ga0307515_10000010 3300028794 Bacteria 651586
254 Ga0307515_10310555 3300028794 Bacteria 1252
255 Ga0316177_1046665 3300030731 Bacteria 1180
256 Ga0307513_10041139 3300031456 Bacteria 5105
257 Ga0307509_10068334 3300031507 Bacteria 3719
258 Ga0307509_10118832 3300031507 Bacteria 2626
259 Ga0307408_100001536 3300031548 Bacteria 17137
260 Ga0307408_100151347 3300031548 Unclassified 1832
261 Ga0307508_10001577 3300031616 Bacteria 25442
262 Ga0307412_10003222 3300031911 Bacteria 9078
263 Ga0307412_10105062 3300031911 Bacteria 2005
264 Ga0395900_0049911 3300037418 Bacteria 4311
265 Ga0395900_0209653 3300037418 Bacteria 1968
266 Ga0395905_0001068 3300037471 Bacteria 34524
267 Ga0395905_0017024 3300037471 Bacteria 6901
268 Ga0395901_0127385 3300038443 Bacteria 2676
269 Ga0466972_0001443 3300044658 Bacteria 11543
270 Ga0466957_0000150 3300044842 Bacteria 30176
271 Ga0466960_0022361 3300044901 Bacteria 2827
272 Ga0495670_0061520 3300046691 Bacteria 1888
273 Ga0501298_006515 3300049521 Bacteria 1911
274 Ga0501206_005916 3300049653 Bacteria 1583
275 Ga0501207_001963 3300049654 Bacteria 2627
276 Ga0501217_014279 3300049661 Bacteria 1792
277 Ga0501217_030842 3300049661 Unclassified 1318
278 Ga0501223_002923 3300049663 Bacteria 3748
279 Ga0501238_019497 3300049671 Unclassified 953
280 Ga0501242_002214 3300049674 Bacteria 2031
281 Ga0501253_024553 3300049683 Bacteria 1095
282 Ga0501257_001304 3300049686 Bacteria 5149
283 Ga0501259_002275 3300049688 Bacteria 3146
284 Ga0501259_005901 3300049688 Bacteria 1940
285 nmdc:mga05p37_78607_c1 3300050507 Bacteria 4062
286 nmdc:mga05p37_990_c1 3300050507 Bacteria 6835
287 nmdc:mga09592_191688_c1 3300050508 Bacteria 1769
288 nmdc:mga09592_823_c1 3300050508 Bacteria 24005
289 nmdc:mga06r32_16860_c1 3300050510 Bacteria 6662
290 nmdc:mga08y16_33522_c1 3300050511 Bacteria 5393
291 Ga0500644_0075962 3300053088 Bacteria 1223
292 Ga0500583_0000035 3300053092 Bacteria 96248
293 Ga0500583_0001870 3300053092 Bacteria 6156
294 Ga0500652_146850 3300053131 Bacteria 980
295 Ga0500658_0201551 3300053134 Unclassified 910
296 Ga0500604_0002027 3300053151 Bacteria 5599
297 Ga0500616_0003610 3300053153 Bacteria 11664
298 Ga0500622_0000016 3300053156 Bacteria 337983
299 Ga0500622_0003046 3300053156 Bacteria 11579
300 Ga0500622_0009986 3300053156 Bacteria 5236

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005290 Ga0065712_10002588 Ga0065712_100025884 258
2 3300005331 Ga0070670_100201900 Ga0070670_1002019001 258
3 3300005334 Ga0068869_100169809 Ga0068869_1001698092 258
4 3300005340 Ga0070689_100108096 Ga0070689_1001080962 258
5 3300005354 Ga0070675_100003096 Ga0070675_1000030964 258
6 3300005355 Ga0070671_100265726 Ga0070671_1002657262 258
7 3300005364 Ga0070673_100004586 Ga0070673_1000045866 258
8 3300005365 Ga0070688_100033057 Ga0070688_1000330573 258
9 3300005438 Ga0070701_10030329 Ga0070701_100303293 258
10 3300005441 Ga0070700_100144101 Ga0070700_1001441012 258
11 3300005444 Ga0070694_100092649 Ga0070694_1000926492 258
12 3300005543 Ga0070672_100022422 Ga0070672_1000224224 258
13 3300005577 Ga0068857_100056041 Ga0068857_1000560412 258
14 3300005617 Ga0068859_100447814 Ga0068859_1004478142 258
15 3300005719 Ga0068861_100020375 Ga0068861_1000203753 258
16 3300005840 Ga0068870_10017874 Ga0068870_100178743 258
17 3300005844 Ga0068862_100014984 Ga0068862_1000149843 258
18 3300006931 Ga0097620_100447816 Ga0097620_1004478162 258
19 3300017792 Ga0163161_10306130 Ga0163161_103061301 258
20 3300025315 Ga0207697_10007748 Ga0207697_100077485 258
21 3300025901 Ga0207688_10129294 Ga0207688_101292942 258
22 3300025908 Ga0207643_10023636 Ga0207643_100236361 258
23 3300025923 Ga0207681_10003649 Ga0207681_100036499 258
24 3300025925 Ga0207650_10225229 Ga0207650_102252291 258
25 3300025926 Ga0207659_10019217 Ga0207659_100192174 258
26 3300025933 Ga0207706_10112023 Ga0207706_101120232 258
27 3300025936 Ga0207670_10141438 Ga0207670_101414381 258
28 3300025942 Ga0207689_10057162 Ga0207689_100571623 258
29 3300025945 Ga0207679_10463638 Ga0207679_104636381 258
30 3300025960 Ga0207651_10009308 Ga0207651_100093084 258
31 3300025961 Ga0207712_10061324 Ga0207712_100613243 258
32 3300025972 Ga0207668_10444178 Ga0207668_104441781 258
33 3300026075 Ga0207708_10152049 Ga0207708_101520492 258
34 3300026116 Ga0207674_10024798 Ga0207674_100247984 258
35 3300026118 Ga0207675_100007215 Ga0207675_1000072159 258
36 3300027907 Ga0207428_10023533 Ga0207428_100235332 258
37 3300028380 Ga0268265_10496956 Ga0268265_104969562 270
38 3300025940 Ga0207691_10145149 Ga0207691_101451492 271
39 3300049653 Ga0501206_005916 Ga0501206_005916_42_872 275
40 iso_pu_bacteria 2929154850 2929156079 275
41 3300031456 Ga0307513_10041139 Ga0307513_100411391 276
42 iso_pu_bacteria 2522125168 2522548845 276
43 iso_pu_bacteria 2818991437 2819547530 276
44 3300002077 JGI24744J21845_10007694 JGI24744J21845_100076942 277
45 3300003316 rootH1_10008657 rootH1_100086578 277
46 3300003316 rootH1_10183589 rootH1_101835892 277
47 3300003320 rootH2_10074509 rootH2_100745092 277
48 3300003322 rootL2_10030290 rootL2_100302907 277
49 3300003323 rootH1_10000778 rootH1_1000077829 277
50 3300003323 rootH1_10008115 rootH1_100081155 277
51 3300003323 rootH1_10084095 rootH1_100840953 277
52 3300005328 Ga0070676_10002132 Ga0070676_100021323 277
53 3300005334 Ga0068869_100181091 Ga0068869_1001810912 277
54 3300005338 Ga0068868_100016014 Ga0068868_1000160145 277
55 3300005338 Ga0068868_100155623 Ga0068868_1001556232 277
56 3300005347 Ga0070668_100018278 Ga0070668_1000182784 277
57 3300005353 Ga0070669_100041631 Ga0070669_1000416313 277
58 3300005353 Ga0070669_100056693 Ga0070669_1000566932 277
59 3300005353 Ga0070669_100240047 Ga0070669_1002400472 277
60 3300005356 Ga0070674_100026795 Ga0070674_1000267952 277
61 3300005367 Ga0070667_100012291 Ga0070667_1000122915 277
62 3300005456 Ga0070678_100004411 Ga0070678_1000044113 277
63 3300005457 Ga0070662_100074518 Ga0070662_1000745183 277
64 3300005459 Ga0068867_100009802 Ga0068867_1000098022 277
65 3300005466 Ga0070685_10107080 Ga0070685_101070802 277
66 3300005471 Ga0070698_100001455 Ga0070698_10000145531 277
67 3300005518 Ga0070699_100050490 Ga0070699_1000504903 277
68 3300005543 Ga0070672_100007653 Ga0070672_1000076536 277
69 3300005548 Ga0070665_100014393 Ga0070665_1000143935 277
70 3300005563 Ga0068855_100175754 Ga0068855_1001757542 277
71 3300005577 Ga0068857_100016370 Ga0068857_1000163703 277
72 3300005577 Ga0068857_100177466 Ga0068857_1001774661 277
73 3300005578 Ga0068854_100007715 Ga0068854_1000077154 277
74 3300005615 Ga0070702_100195196 Ga0070702_1001951962 277
75 3300005616 Ga0068852_100026803 Ga0068852_1000268032 277
76 3300005617 Ga0068859_100019507 Ga0068859_1000195074 277
77 3300005617 Ga0068859_100042919 Ga0068859_1000429195 277
78 3300005618 Ga0068864_100091659 Ga0068864_1000916593 277
79 3300005618 Ga0068864_100105976 Ga0068864_1001059762 277
80 3300005718 Ga0068866_10008613 Ga0068866_100086132 277
81 3300005840 Ga0068870_10045639 Ga0068870_100456392 277
82 3300005843 Ga0068860_100010537 Ga0068860_1000105374 277
83 3300005843 Ga0068860_100016634 Ga0068860_1000166341 277
84 3300005844 Ga0068862_100122119 Ga0068862_1001221192 277
85 3300006237 Ga0097621_100009954 Ga0097621_1000099545 277
86 3300006358 Ga0068871_100018635 Ga0068871_1000186354 277
87 3300006358 Ga0068871_100221290 Ga0068871_1002212902 277
88 3300006847 Ga0075431_100052698 Ga0075431_1000526983 277
89 3300006871 Ga0075434_100050594 Ga0075434_1000505945 277
90 3300006880 Ga0075429_100063200 Ga0075429_1000632002 277
91 3300006881 Ga0068865_100035586 Ga0068865_1000355863 277
92 3300006931 Ga0097620_100019508 Ga0097620_1000195084 277
93 3300006931 Ga0097620_100042919 Ga0097620_1000429195 277
94 3300009093 Ga0105240_10000276 Ga0105240_1000027613 277
95 3300009093 Ga0105240_10022734 Ga0105240_100227344 277
96 3300009093 Ga0105240_10035065 Ga0105240_100350656 277
97 3300009098 Ga0105245_10268629 Ga0105245_102686291 277
98 3300009101 Ga0105247_10015701 Ga0105247_100157015 277
99 3300009147 Ga0114129_10755760 Ga0114129_107557602 277
100 3300009174 Ga0105241_10095562 Ga0105241_100955622 277
101 3300009174 Ga0105241_10118181 Ga0105241_101181813 277
102 3300009176 Ga0105242_10295106 Ga0105242_102951061 277
103 3300009545 Ga0105237_10000126 Ga0105237_1000012612 277
104 3300009545 Ga0105237_10000834 Ga0105237_1000083413 277
105 3300009545 Ga0105237_10001234 Ga0105237_1000123413 277
106 3300009551 Ga0105238_10001229 Ga0105238_1000122919 277
107 3300009551 Ga0105238_10006854 Ga0105238_1000685410 277
108 3300009553 Ga0105249_10399051 Ga0105249_103990511 277
109 3300010375 Ga0105239_10004257 Ga0105239_100042573 277
110 3300011119 Ga0105246_10007130 Ga0105246_100071305 277
111 3300013104 Ga0157370_10027576 Ga0157370_100275762 277
112 3300013105 Ga0157369_10024217 Ga0157369_1002421710 277
113 3300013296 Ga0157374_10161939 Ga0157374_101619394 277
114 3300013297 Ga0157378_10097841 Ga0157378_100978413 277
115 3300013306 Ga0163162_10056196 Ga0163162_100561963 277
116 3300013307 Ga0157372_10000674 Ga0157372_1000067422 277
117 3300013308 Ga0157375_10055743 Ga0157375_100557435 277
118 3300014325 Ga0163163_10222446 Ga0163163_102224462 277
119 3300014745 Ga0157377_10346647 Ga0157377_103466471 277
120 3300014968 Ga0157379_10193690 Ga0157379_101936902 277
121 3300014969 Ga0157376_10011727 Ga0157376_100117276 277
122 3300025315 Ga0207697_10059343 Ga0207697_100593431 277
123 3300025900 Ga0207710_10001312 Ga0207710_100013128 277
124 3300025901 Ga0207688_10018519 Ga0207688_100185194 277
125 3300025904 Ga0207647_10026465 Ga0207647_100264652 277
126 3300025907 Ga0207645_10004292 Ga0207645_100042928 277
127 3300025908 Ga0207643_10049537 Ga0207643_100495372 277
128 3300025911 Ga0207654_10178650 Ga0207654_101786502 277
129 3300025911 Ga0207654_10217266 Ga0207654_102172662 277
130 3300025913 Ga0207695_10001186 Ga0207695_100011866 277
131 3300025914 Ga0207671_10004690 Ga0207671_1000469011 277
132 3300025923 Ga0207681_10127692 Ga0207681_101276921 277
133 3300025923 Ga0207681_10222699 Ga0207681_102226991 277
134 3300025924 Ga0207694_10127499 Ga0207694_101274992 277
135 3300025933 Ga0207706_10206215 Ga0207706_102062151 277
136 3300025934 Ga0207686_10234160 Ga0207686_102341602 277
137 3300025937 Ga0207669_10036218 Ga0207669_100362183 277
138 3300025940 Ga0207691_10009989 Ga0207691_100099899 277
139 3300025942 Ga0207689_10001087 Ga0207689_100010874 277
140 3300025949 Ga0207667_10001285 Ga0207667_1000128527 277
141 3300025972 Ga0207668_10013350 Ga0207668_100133505 277
142 3300025986 Ga0207658_10192863 Ga0207658_101928631 277
143 3300026035 Ga0207703_10196176 Ga0207703_101961762 277
144 3300026041 Ga0207639_10155732 Ga0207639_101557322 277
145 3300026041 Ga0207639_10240765 Ga0207639_102407651 277
146 3300026078 Ga0207702_10251590 Ga0207702_102515901 277
147 3300026095 Ga0207676_10044960 Ga0207676_100449602 277
148 3300026116 Ga0207674_10020047 Ga0207674_100200473 277
149 3300026116 Ga0207674_10126461 Ga0207674_101264612 277
150 3300026116 Ga0207674_10171908 Ga0207674_101719081 277
151 3300026118 Ga0207675_100076961 Ga0207675_1000769613 277
152 3300026118 Ga0207675_100412930 Ga0207675_1004129302 277
153 3300026121 Ga0207683_10001021 Ga0207683_100010219 277
154 3300026142 Ga0207698_10044188 Ga0207698_100441884 277
155 3300027717 Ga0209998_10042454 Ga0209998_100424541 277
156 3300028379 Ga0268266_10113945 Ga0268266_101139453 277
157 3300028381 Ga0268264_10050430 Ga0268264_100504304 277
158 3300028381 Ga0268264_10208566 Ga0268264_102085662 277
159 3300031507 Ga0307509_10068334 Ga0307509_100683342 277
160 3300031507 Ga0307509_10118832 Ga0307509_101188323 277
161 3300031616 Ga0307508_10001577 Ga0307508_1000157716 277
162 3300044658 Ga0466972_0001443 Ga0466972_0001443_7127_7966 277
163 3300044842 Ga0466957_0000150 Ga0466957_0000150_22104_22943 277
164 3300044901 Ga0466960_0022361 Ga0466960_0022361_1201_2034 277
165 3300046691 Ga0495670_0061520 Ga0495670_0061520_723_1562 277
166 3300049521 Ga0501298_006515 Ga0501298_006515_11_847 277
167 3300050507 nmdc:mga05p37_78607_c1 nmdc:mga05p37_78607_c1_3005_3874 277
168 3300050508 nmdc:mga09592_191688_c1 nmdc:mga09592_191688_c1_237_1106 277
169 3300050510 nmdc:mga06r32_16860_c1 nmdc:mga06r32_16860_c1_2780_3649 277
170 3300053092 Ga0500583_0000035 Ga0500583_0000035_29610_30449 277
171 3300053092 Ga0500583_0001870 Ga0500583_0001870_1020_1859 277
172 3300053131 Ga0500652_146850 Ga0500652_146850_22_861 277
173 3300053134 Ga0500658_0201551 Ga0500658_0201551_22_861 277
174 3300053151 Ga0500604_0002027 Ga0500604_0002027_2481_3317 277
175 3300053153 Ga0500616_0003610 Ga0500616_0003610_7624_8463 277
176 3300053156 Ga0500622_0009986 Ga0500622_0009986_50_889 277
177 iso_pu_bacteria 2904555929 2904559999 277
178 3300003316 rootH1_10030923 rootH1_100309233 278
179 3300003794 Ga0055531_10000118 Ga0055531_1000011850 278
180 3300005288 Ga0065714_10073397 Ga0065714_100733973 278
181 3300005288 Ga0065714_10117902 Ga0065714_101179023 278
182 3300005295 Ga0065707_10138814 Ga0065707_101388142 278
183 3300005327 Ga0070658_10320762 Ga0070658_103207621 278
184 3300005337 Ga0070682_100166166 Ga0070682_1001661662 278
185 3300005345 Ga0070692_10295541 Ga0070692_102955411 278
186 3300005367 Ga0070667_100535620 Ga0070667_1005356201 278
187 3300005458 Ga0070681_10086542 Ga0070681_100865422 278
188 3300005459 Ga0068867_100102244 Ga0068867_1001022442 278
189 3300005530 Ga0070679_100023465 Ga0070679_1000234657 278
190 3300005539 Ga0068853_100017893 Ga0068853_1000178932 278
191 3300005543 Ga0070672_100182814 Ga0070672_1001828141 278
192 3300005563 Ga0068855_100048317 Ga0068855_1000483174 278
193 3300005563 Ga0068855_100072520 Ga0068855_1000725204 278
194 3300005564 Ga0070664_100141628 Ga0070664_1001416283 278
195 3300005578 Ga0068854_100024051 Ga0068854_1000240512 278
196 3300005614 Ga0068856_100022042 Ga0068856_1000220427 278
197 3300005616 Ga0068852_100005385 Ga0068852_1000053855 278
198 3300005617 Ga0068859_100000859 Ga0068859_1000008593 278
199 3300005618 Ga0068864_100071327 Ga0068864_1000713273 278
200 3300005841 Ga0068863_100161647 Ga0068863_1001616473 278
201 3300005841 Ga0068863_100288655 Ga0068863_1002886553 278
202 3300005843 Ga0068860_100013144 Ga0068860_10001314410 278
203 3300005843 Ga0068860_100036266 Ga0068860_1000362662 278
204 3300005844 Ga0068862_100010083 Ga0068862_1000100835 278
205 3300006844 Ga0075428_100001878 Ga0075428_10000187815 278
206 3300006844 Ga0075428_100139375 Ga0075428_1001393752 278
207 3300006880 Ga0075429_100001931 Ga0075429_10000193118 278
208 3300006931 Ga0097620_100000859 Ga0097620_1000008593 278
209 3300009093 Ga0105240_10042267 Ga0105240_100422672 278
210 3300009094 Ga0111539_10037349 Ga0111539_100373492 278
211 3300009147 Ga0114129_10000629 Ga0114129_1000062915 278
212 3300009174 Ga0105241_10003332 Ga0105241_1000333210 278
213 3300009176 Ga0105242_10142300 Ga0105242_101423002 278
214 3300009545 Ga0105237_10003848 Ga0105237_100038486 278
215 3300009553 Ga0105249_10003302 Ga0105249_100033024 278
216 3300010375 Ga0105239_10010422 Ga0105239_100104226 278
217 3300013100 Ga0157373_10003053 Ga0157373_100030538 278
218 3300013102 Ga0157371_10157507 Ga0157371_101575071 278
219 3300013104 Ga0157370_10001708 Ga0157370_1000170816 278
220 3300013104 Ga0157370_10012534 Ga0157370_100125344 278
221 3300013296 Ga0157374_10074831 Ga0157374_100748313 278
222 3300013296 Ga0157374_10256958 Ga0157374_102569582 278
223 3300013297 Ga0157378_10087626 Ga0157378_100876263 278
224 3300013306 Ga0163162_10148367 Ga0163162_101483673 278
225 3300013307 Ga0157372_10015773 Ga0157372_100157735 278
226 3300013308 Ga0157375_10028187 Ga0157375_100281874 278
227 3300013308 Ga0157375_10077968 Ga0157375_100779681 278
228 3300013308 Ga0157375_10851787 Ga0157375_108517871 278
229 3300014325 Ga0163163_10343016 Ga0163163_103430162 278
230 3300014326 Ga0157380_10001323 Ga0157380_100013234 278
231 3300014745 Ga0157377_10007647 Ga0157377_100076474 278
232 3300014969 Ga0157376_10633862 Ga0157376_106338621 278
233 3300017792 Ga0163161_10206924 Ga0163161_102069242 278
234 3300025304 Ga0209257_1000007 Ga0209257_1000007141 278
235 3300025304 Ga0209257_1017503 Ga0209257_10175032 278
236 3300025909 Ga0207705_10306264 Ga0207705_103062642 278
237 3300025912 Ga0207707_10040080 Ga0207707_100400804 278
238 3300025913 Ga0207695_10001001 Ga0207695_1000100127 278
239 3300025914 Ga0207671_10018022 Ga0207671_100180226 278
240 3300025921 Ga0207652_10132757 Ga0207652_101327572 278
241 3300025934 Ga0207686_10081553 Ga0207686_100815532 278
242 3300025942 Ga0207689_10164255 Ga0207689_101642552 278
243 3300025942 Ga0207689_10319087 Ga0207689_103190871 278
244 3300025949 Ga0207667_10020105 Ga0207667_100201053 278
245 3300026041 Ga0207639_10026221 Ga0207639_100262214 278
246 3300026078 Ga0207702_10017156 Ga0207702_100171563 278
247 3300026088 Ga0207641_10029074 Ga0207641_100290741 278
248 3300026095 Ga0207676_10049853 Ga0207676_100498533 278
249 3300026121 Ga0207683_10101630 Ga0207683_101016302 278
250 3300026142 Ga0207698_10006655 Ga0207698_100066556 278
251 3300028380 Ga0268265_10065939 Ga0268265_100659392 278
252 3300028381 Ga0268264_10006309 Ga0268264_100063094 278
253 3300028381 Ga0268264_10065650 Ga0268264_100656503 278
254 3300028794 Ga0307515_10000003 Ga0307515_10000003310 278
255 3300028794 Ga0307515_10000010 Ga0307515_10000010397 278
256 3300028794 Ga0307515_10310555 Ga0307515_103105552 278
257 3300030731 Ga0316177_1046665 Ga0316177_10466651 278
258 3300037418 Ga0395900_0049911 Ga0395900_0049911_763_1617 278
259 3300037418 Ga0395900_0209653 Ga0395900_0209653_395_1249 278
260 3300037471 Ga0395905_0001068 Ga0395905_0001068_3297_4151 278
261 3300037471 Ga0395905_0017024 Ga0395905_0017024_3843_4697 278
262 3300049661 Ga0501217_014279 Ga0501217_014279_685_1524 278
263 3300049688 Ga0501259_005901 Ga0501259_005901_668_1507 278
264 3300050507 nmdc:mga05p37_990_c1 nmdc:mga05p37_990_c1_397_1239 278
265 3300050508 nmdc:mga09592_823_c1 nmdc:mga09592_823_c1_11291_12130 278
266 3300050511 nmdc:mga08y16_33522_c1 nmdc:mga08y16_33522_c1_636_1490 278
267 3300053088 Ga0500644_0075962 Ga0500644_0075962_245_1081 278
268 3300053156 Ga0500622_0000016 Ga0500622_0000016_57736_58650 278
269 3300053156 Ga0500622_0003046 Ga0500622_0003046_817_1653 278
270 3300005548 Ga0070665_100121723 Ga0070665_1001217232 279
271 3300049654 Ga0501207_001963 Ga0501207_001963_1554_2396 279
272 3300049661 Ga0501217_030842 Ga0501217_030842_422_1264 279
273 3300049671 Ga0501238_019497 Ga0501238_019497_11_853 279
274 3300049674 Ga0501242_002214 Ga0501242_002214_233_1075 279
275 3300049683 Ga0501253_024553 Ga0501253_024553_210_1052 279
276 3300049686 Ga0501257_001304 Ga0501257_001304_2988_3830 279
277 3300049688 Ga0501259_002275 Ga0501259_002275_2290_3132 279
278 3300002773 JGI25152J39213_1000704 JGI25152J39213_10007044 280
279 3300002774 JGI25150J39212_1000005 JGI25150J39212_10000055 280
280 3300003187 JGI25151J46595_10000004 JGI25151J46595_10000004173 280
281 3300003215 JGI25153J46596_10000004 JGI25153J46596_10000004173 280
282 3300003322 rootL2_10334980 rootL2_103349803 280
283 3300003781 Ga0055536_1000012 Ga0055536_1000012202 280
284 3300003781 Ga0055536_1007810 Ga0055536_10078102 280
285 3300005262 Ga0065165_1000628 Ga0065165_100062815 280
286 3300005288 Ga0065714_10064492 Ga0065714_1006449240 280
287 3300005614 Ga0068856_100073918 Ga0068856_1000739182 280
288 3300009036 Ga0105244_10065888 Ga0105244_100658881 280
289 3300013297 Ga0157378_10072948 Ga0157378_100729481 280
290 3300025245 Ga0207425_1000008 Ga0207425_1000008262 280
291 3300025258 Ga0209129_1000040 Ga0209129_10000404 280
292 3300025292 Ga0209676_1000806 Ga0209676_100080618 280
293 3300025294 Ga0209025_1000020 Ga0209025_1000020262 280
294 3300025297 Ga0209758_1000022 Ga0209758_1000022262 280
295 3300031548 Ga0307408_100001536 Ga0307408_10000153611 280
296 3300031548 Ga0307408_100151347 Ga0307408_1001513471 280
297 3300031911 Ga0307412_10003222 Ga0307412_100032226 280
298 3300031911 Ga0307412_10105062 Ga0307412_101050622 280
299 3300049663 Ga0501223_002923 Ga0501223_002923_1418_2281 280
300 3300001990 JGI24737J22298_10032277 JGI24737J22298_100322772 281
301 3300013100 Ga0157373_10057481 Ga0157373_100574812 281
302 3300013102 Ga0157371_10001510 Ga0157371_100015102 281
303 3300013307 Ga0157372_10000376 Ga0157372_100003763 281
304 3300038443 Ga0395901_0127385 Ga0395901_0127385_1552_2397 281

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09828

ChrB_C

ChrB, C-terminal domain

41

174

0.95

PF12833

HTH_18

Helix-turn-helix domain

232

312

0.94

PF00165

HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

271

309

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6swi-assembly1.cif.gz_A the c-terminal domain of arat, a response regulator from geobacillus stearothermophilus 0.9007 168 276
3w6v-assembly1.cif.gz_A crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna 0.8951 170 276
3oou-assembly1.cif.gz_A the structure of a protein with unkown function from listeria innocua 0.8922 170 275
5chh-assembly1.cif.gz_A crystal structure of transcriptional regulator cdpr from pseudomonas aeruginosa 0.8715 177 275
3mkl-assembly1.cif.gz_A crystal structure of dna-binding transcriptional dual regulator from escherichia coli k-12 0.8702 170 276
ID Description Score Start End Superfamily
1d5yD02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9754 228 275 1.10.10.60
af_P32677_219_275_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9737 226 281 1.10.10.60
5suwA03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9721 219 278 1.10.10.60
3lsgA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9685 230 274 1.10.10.60
af_P09377_170_274_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9494 171 276 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A352GJN0-F1-model_v4 Sulfurtransferase 0.9924 2 113 GO:0016740
AF-A0A1B4V351-F1-model_v4 Chromate resistance protein 0.9914 1 136
AF-K0HYU3-F1-model_v4 Chromate resistance exported protein 0.9913 1 104
AF-A0A529NHZ6-F1-model_v4 Sulfurtransferase 0.9912 1 98 GO:0016740
AF-A0A0E1W8P9-F1-model_v4 ChrB protein 0.9907 1 136

Feature Viewer

pLDDT pTM Quality
83.33 0.53 Medium
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Predicted Structure (AlphaFold2)

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