F397865

General Info

Members Datasets Scaffolds Average Seq Length
304 223 278 341

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2990265787|2990267879
Length 373
Sequence IAVVLALASTALATPALARDKSWYVGIEGGAMIVEDIDYDVANLNNAASVDHDYGYDVDGVVGYDFGGFRLETEVGYRRATVDGYQSSTTTPFFNGAGARGNAAAGTYNNAGGSTSALSFMLNGLLDFGDDDGIQGFVGGGVGVARVKANYALNNNGNFLDDSDTVFAWQGLAGIRAPLTDHLDATLKYRFFNADNVKLVDVSNRTFDGRFRSHSILGGVTYNFGSPTPPPPPPPPPPPPPPPPPPPPEPAPVVQCQPGPFIVFFEWNKSDITPEAASILDNAVTQYQSCGNAQVMLAGYTDTSGSPKYNVGLSQRRADSVKAYMVSRSIPDGVISTEAFGETNLRVQTADGVREVQNRRVEITYGPGAGSGQ

Samples

Sample ID Description Type Environment
1 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
2 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
3 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
4 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
5 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
6 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
7 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
8 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
9 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
10 2775507255 Sphingobium indicum B90A Isolate Rhizosphere
11 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
12 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
13 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
14 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
15 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
16 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
17 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
18 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
19 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
20 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
21 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
22 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
23 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
24 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
25 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
26 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
27 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
28 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
29 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
30 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
31 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
32 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
33 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
34 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
35 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
36 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
37 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
38 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
39 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
40 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
41 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
42 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
43 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
44 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
45 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
46 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
47 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
48 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
49 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
50 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
51 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
52 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
53 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
54 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
55 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
56 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
57 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
58 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
62 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
73 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
76 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
77 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
78 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
82 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
84 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
119 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
120 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
121 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
122 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
123 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
124 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
125 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
126 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
127 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
128 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
129 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
130 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
131 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
132 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
133 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
134 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
135 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
136 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
137 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
138 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
139 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
140 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
141 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
142 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
143 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
144 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
145 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
146 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
147 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
148 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
149 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
150 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
151 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
152 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
153 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
154 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
155 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
156 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
157 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
158 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
159 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
160 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
161 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
162 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
163 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
164 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
165 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
166 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
167 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
168 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
169 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
170 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
171 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
172 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
173 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
174 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
175 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
176 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
177 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
178 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
179 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
180 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
181 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
182 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
183 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
184 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
185 3300049530 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
186 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
187 3300049538 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
188 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
189 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
191 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
192 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
193 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
194 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
195 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
196 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
197 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
198 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
199 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
200 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
201 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
202 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
203 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
204 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
205 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
206 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
207 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
208 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
209 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
210 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
211 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
212 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
213 3300059490 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 7R_CD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
214 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
215 3300059506 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 52R_CW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
216 3300059512 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 57R_AW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
217 3300059513 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 59R_AW_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
218 3300059623 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 66R_SW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
219 3300059639 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 3R_CW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
220 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
221 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
222 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
223 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.86
Metatranscriptomes 5.59
Isolates 8.55

Biome Distribution

Category Percentage (%)
Aerial Root 1.32
Bulb 0
Endosphere 13.16
Nodule 0
Rhizoplane 2.96
Rhizosphere 67.43
Stem 0
Stem Tuber 0
Unclassified 15.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10001672 3300001979 Bacteria 10176
2 JGI24739J22299_10011872 3300001989 Bacteria 3207
3 JGI24737J22298_10001740 3300001990 Bacteria 7772
4 JGI24735J21928_10006713 3300002067 Bacteria 3778
5 JGI25165J46597_1000065 3300003214 Bacteria 199761
6 JGI25153J46596_10000097 3300003215 Bacteria 101627
7 Ga0055525_1000086 3300003759 Bacteria 150228
8 Ga0055542_1000041 3300003762 Bacteria 208892
9 Ga0055529_1000040 3300003763 Bacteria 230562
10 Ga0065714_10011632 3300005288 Bacteria 3264
11 Ga0070658_10009301 3300005327 Bacteria 7904
12 Ga0070676_10043786 3300005328 Bacteria 2602
13 Ga0070676_10147786 3300005328 Bacteria 1502
14 Ga0070670_100045757 3300005331 Bacteria 3762
15 Ga0070661_100309981 3300005344 Bacteria 1230
16 Ga0070668_100001142 3300005347 Bacteria 18686
17 Ga0070669_100051414 3300005353 Bacteria 3012
18 Ga0070673_100039690 3300005364 Bacteria 3605
19 Ga0070659_100298720 3300005366 Bacteria 1342
20 Ga0070667_100003464 3300005367 Bacteria 13440
21 Ga0070667_100087800 3300005367 Bacteria 2669
22 Ga0070663_100113113 3300005455 Bacteria 2042
23 Ga0070662_100090550 3300005457 Bacteria 2296
24 Ga0068867_100055815 3300005459 Bacteria 2921
25 Ga0068853_100049762 3300005539 Bacteria 3602
26 Ga0068853_100108059 3300005539 Bacteria 2467
27 Ga0070665_100000043 3300005548 Bacteria 279774
28 Ga0070664_100154448 3300005564 Bacteria 2027
29 Ga0068854_100201624 3300005578 Bacteria 1564
30 Ga0068854_100203043 3300005578 Bacteria 1559
31 Ga0068859_100147677 3300005617 Bacteria 2426
32 Ga0068864_100003105 3300005618 Bacteria 13719
33 Ga0068864_100195499 3300005618 Bacteria 1856
34 Ga0068861_100000882 3300005719 Bacteria 18211
35 Ga0068863_100000031 3300005841 Bacteria 175602
36 Ga0068863_100001219 3300005841 Bacteria 25689
37 Ga0068858_100003374 3300005842 Bacteria 15895
38 Ga0068860_100045881 3300005843 Bacteria 4167
39 Ga0068862_100000149 3300005844 Bacteria 79784
40 Ga0097620_100147681 3300006931 Bacteria 2426
41 Ga0105240_10294506 3300009093 Bacteria 1859
42 Ga0105245_10001565 3300009098 Bacteria 20752
43 Ga0105247_10005115 3300009101 Bacteria 8309
44 Ga0105243_10000308 3300009148 Bacteria 54026
45 Ga0105248_10000558 3300009177 Bacteria 42249
46 Ga0105249_10000056 3300009553 Bacteria 160443
47 Ga0157371_10000011 3300013102 Bacteria 377608
48 Ga0157371_10095527 3300013102 Bacteria 2107
49 Ga0157369_10121963 3300013105 Bacteria 2765
50 Ga0157374_10035670 3300013296 Bacteria 4551
51 Ga0157378_10070558 3300013297 Bacteria 3137
52 Ga0157378_10094345 3300013297 Bacteria 2725
53 Ga0157378_10128075 3300013297 Bacteria 2347
54 Ga0163162_10182037 3300013306 Bacteria 2227
55 Ga0157380_10243139 3300014326 Bacteria 1624
56 Ga0182008_10090985 3300014497 Bacteria 1504
57 Ga0183363_1007 3300015690 Bacteria 315687
58 Ga0163161_10025251 3300017792 Bacteria 4204
59 Ga0206356_11143413 3300020070 Bacteria 1568
60 Ga0206350_10937426 3300020080 Bacteria 1181
61 Ga0206354_11563837 3300020081 Bacteria 1195
62 Ga0209147_100889 3300025229 Bacteria 13732
63 Ga0209563_100024 3300025230 Bacteria 601155
64 Ga0209148_1000008 3300025254 Bacteria 1504371
65 Ga0209233_1000107 3300025261 Bacteria 267399
66 Ga0209455_1000002 3300025272 Bacteria 1505459
67 Ga0209758_1000007 3300025297 Bacteria 1270410
68 Ga0207697_10005019 3300025315 Bacteria 6212
69 Ga0207656_10021698 3300025321 Bacteria 2569
70 Ga0207645_10119884 3300025907 Bacteria 1707
71 Ga0207705_10000154 3300025909 Bacteria 73880
72 Ga0207695_10015208 3300025913 Bacteria 9075
73 Ga0207657_10009444 3300025919 Bacteria 9798
74 Ga0207657_10062626 3300025919 Bacteria 3184
75 Ga0207649_10000749 3300025920 Bacteria 21220
76 Ga0207649_10059268 3300025920 Bacteria 2401
77 Ga0207681_10004992 3300025923 Bacteria 8151
78 Ga0207681_10046171 3300025923 Bacteria 2929
79 Ga0207694_10001580 3300025924 Bacteria 19295
80 Ga0207694_10003792 3300025924 Bacteria 11961
81 Ga0207694_10163188 3300025924 Bacteria 1801
82 Ga0207650_10047378 3300025925 Bacteria 3167
83 Ga0207687_10000415 3300025927 Bacteria 28949
84 Ga0207690_10000325 3300025932 Bacteria 31915
85 Ga0207706_10174661 3300025933 Bacteria 1887
86 Ga0207709_10000005 3300025935 Bacteria 806813
87 Ga0207691_10039417 3300025940 Bacteria 4371
88 Ga0207711_10010304 3300025941 Bacteria 7763
89 Ga0207667_10000001 3300025949 Bacteria 1178522
90 Ga0207651_10026616 3300025960 Bacteria 3617
91 Ga0207712_10000015 3300025961 Bacteria 346689
92 Ga0207712_10091879 3300025961 Bacteria 2236
93 Ga0207668_10000802 3300025972 Bacteria 19249
94 Ga0207640_10019367 3300025981 Bacteria 4019
95 Ga0207658_10002467 3300025986 Bacteria 13510
96 Ga0207703_10002479 3300026035 Bacteria 16012
97 Ga0207703_10006650 3300026035 Bacteria 9221
98 Ga0207639_10000468 3300026041 Bacteria 27844
99 Ga0207639_10013552 3300026041 Bacteria 5711
100 Ga0207678_10000084 3300026067 Bacteria 76874
101 Ga0207678_10007422 3300026067 Bacteria 9710
102 Ga0207702_10003659 3300026078 Bacteria 13925
103 Ga0207702_10040160 3300026078 Bacteria 3923
104 Ga0207641_10000483 3300026088 Bacteria 44980
105 Ga0207641_10001029 3300026088 Bacteria 28275
106 Ga0207676_10000730 3300026095 Bacteria 25739
107 Ga0207676_10104620 3300026095 Bacteria 2355
108 Ga0207674_10016045 3300026116 Bacteria 8205
109 Ga0207675_100002491 3300026118 Bacteria 18232
110 Ga0207675_100218888 3300026118 Bacteria 1834
111 Ga0207698_10003762 3300026142 Bacteria 9171
112 Ga0268266_10000002 3300028379 Bacteria 3059047
113 Ga0268265_10000021 3300028380 Bacteria 272292
114 Ga0268264_10000756 3300028381 Bacteria 36196
115 Ga0268264_10011725 3300028381 Bacteria 7228
116 Ga0307517_10006881 3300028786 Bacteria 16723
117 Ga0307517_10017144 3300028786 Bacteria 9461
118 Ga0307513_10008387 3300031456 Bacteria 13230
119 Ga0307513_10029351 3300031456 Bacteria 6273
120 Ga0307513_10270637 3300031456 Bacteria 1482
121 Ga0307408_100099947 3300031548 Bacteria 2208
122 Ga0307408_100215210 3300031548 Bacteria 1564
123 Ga0307508_10001326 3300031616 Bacteria 28003
124 Ga0307405_10018399 3300031731 Bacteria 3853
125 Ga0307405_10080708 3300031731 Bacteria 2124
126 Ga0307410_10114410 3300031852 Bacteria 1957
127 Ga0307406_10008116 3300031901 Bacteria 5848
128 Ga0307407_10164896 3300031903 Bacteria 1453
129 Ga0307412_10000348 3300031911 Bacteria 28830
130 Ga0307412_10004136 3300031911 Bacteria 8082
131 Ga0307409_100215392 3300031995 Bacteria 1729
132 Ga0307416_100002729 3300032002 Bacteria 10232
133 Ga0307414_10000105 3300032004 Bacteria 59546
134 Ga0307414_10055505 3300032004 Bacteria 2774
135 Ga0307411_10006851 3300032005 Bacteria 5740
136 Ga0307411_10242266 3300032005 Bacteria 1412
137 Ga0307415_100130005 3300032126 Bacteria 1904
138 Ga0307510_10000081 3300033180 Bacteria 72540
139 Ga0395901_0179686 3300038443 Bacteria 2219
140 Ga0436365_1046139 3300039437 Bacteria 1337
141 Ga0495627_000268 3300046453 Bacteria 53145
142 Ga0495627_000410 3300046453 Bacteria 37915
143 Ga0495638_0000011 3300046460 Bacteria 442453
144 Ga0495638_0000048 3300046460 Bacteria 209787
145 Ga0495638_0060595 3300046460 Bacteria 2340
146 Ga0495650_0000096 3300046471 Bacteria 217464
147 Ga0495650_0001338 3300046471 Bacteria 24557
148 Ga0495585_0043665 3300046492 Bacteria 2506
149 Ga0495607_0013766 3300046501 Bacteria 5288
150 Ga0495583_0000077 3300046506 Bacteria 171772
151 Ga0495583_0004543 3300046506 Bacteria 9870
152 Ga0495606_0000416 3300046507 Bacteria 71329
153 Ga0495606_0090985 3300046507 Bacteria 1877
154 Ga0495610_0000697 3300046512 Bacteria 32312
155 Ga0495631_0090397 3300046518 Bacteria 1318
156 Ga0495632_0000039 3300046519 Bacteria 150268
157 Ga0495632_0000834 3300046519 Bacteria 27160
158 Ga0495637_0001499 3300046520 Bacteria 13692
159 Ga0495637_0018427 3300046520 Bacteria 3238
160 Ga0495643_0000162 3300046522 Bacteria 106672
161 Ga0495643_0001368 3300046522 Bacteria 22821
162 Ga0495643_0006530 3300046522 Bacteria 7671
163 Ga0495648_0000023 3300046524 Bacteria 240174
164 Ga0495648_0000065 3300046524 Bacteria 145024
165 Ga0495648_0035141 3300046524 Bacteria 3252
166 Ga0495648_0129722 3300046524 Bacteria 1342
167 Ga0495663_0000006 3300046525 Bacteria 306938
168 Ga0495663_0004522 3300046525 Bacteria 3904
169 Ga0495642_0006834 3300046528 Bacteria 4375
170 Ga0495597_0019321 3300046542 Bacteria 3189
171 Ga0495622_0048922 3300046557 Bacteria 1963
172 Ga0495633_0000600 3300046558 Bacteria 34616
173 Ga0495633_0000724 3300046558 Bacteria 29905
174 Ga0495633_0058545 3300046558 Bacteria 1808
175 Ga0495668_0000022 3300046616 Bacteria 363999
176 Ga0495611_0051203 3300046648 Bacteria 1861
177 Ga0495625_0000212 3300046660 Bacteria 91883
178 Ga0495625_0000860 3300046660 Bacteria 41288
179 Ga0495625_0009022 3300046660 Bacteria 8421
180 Ga0495669_0000069 3300046684 Bacteria 68241
181 Ga0495670_0030686 3300046691 Bacteria 2670
182 Ga0495671_0000012 3300046692 Bacteria 358632
183 Ga0495671_0000062 3300046692 Bacteria 106672
184 Ga0495671_0007840 3300046692 Bacteria 6044
185 Ga0495600_0000992 3300046809 Bacteria 15311
186 Ga0495683_0005840 3300047323 Bacteria 6771
187 Ga0495683_0009196 3300047323 Bacteria 5266
188 Ga0495687_061292 3300047443 Bacteria 1547
189 Ga0495677_0000976 3300047445 Bacteria 11512
190 Ga0495677_0013067 3300047445 Bacteria 3021
191 Ga0495673_0000029 3300047469 Bacteria 471019
192 Ga0495681_0000129 3300047470 Bacteria 66033
193 Ga0495681_0015743 3300047470 Bacteria 4270
194 Ga0495686_0000238 3300047472 Bacteria 99919
195 Ga0495686_0031684 3300047472 Bacteria 3426
196 Ga0495686_0049691 3300047472 Bacteria 2638
197 Ga0495686_0109432 3300047472 Bacteria 1658
198 Ga0496102_0000022 3300048905 Bacteria 246314
199 Ga0496103_0000671 3300048906 Bacteria 25726
200 Ga0496104_0000924 3300048907 Bacteria 25198
201 Ga0496105_0013617 3300048908 Bacteria 6457
202 Ga0496108_0004646 3300048911 Bacteria 11071
203 Ga0496110_0007701 3300048913 Bacteria 8619
204 Ga0496114_0002319 3300048917 Bacteria 14497
205 Ga0496115_0000651 3300048918 Bacteria 25969
206 Ga0496116_0013768 3300048919 Bacteria 6500
207 Ga0496117_0000046 3300048920 Bacteria 300879
208 Ga0496118_0000036 3300048921 Bacteria 318213
209 Ga0496119_0014304 3300048922 Bacteria 6225
210 Ga0496119_0151831 3300048922 Bacteria 1240
211 Ga0496120_0025626 3300048923 Bacteria 3656
212 Ga0496121_0000702 3300048924 Bacteria 62249
213 Ga0496121_0001202 3300048924 Bacteria 45329
214 Ga0496121_0003564 3300048924 Bacteria 22015
215 Ga0496121_0131381 3300048924 Bacteria 1873
216 Ga0496122_0015295 3300048925 Bacteria 7342
217 Ga0496122_0080353 3300048925 Bacteria 2274
218 Ga0496123_0000495 3300048926 Bacteria 68284
219 Ga0496123_0003433 3300048926 Bacteria 17794
220 Ga0496123_0061110 3300048926 Bacteria 2424
221 Ga0496124_0000011 3300048927 Bacteria 524145
222 Ga0496124_0080009 3300048927 Bacteria 2690
223 Ga0496124_0105254 3300048927 Bacteria 2280
224 Ga0496125_0000309 3300048928 Bacteria 96047
225 Ga0496125_0020743 3300048928 Bacteria 6159
226 Ga0496125_0021198 3300048928 Bacteria 6070
227 Ga0496125_0032256 3300048928 Bacteria 4655
228 Ga0496125_0167113 3300048928 Bacteria 1485
229 Ga0496126_0000771 3300048929 Bacteria 57837
230 Ga0496126_0010259 3300048929 Bacteria 9844
231 Ga0496126_0058484 3300048929 Bacteria 3475
232 Ga0496126_0118337 3300048929 Bacteria 2300
233 Ga0501314_005028 3300049530 Bacteria 1115
234 Ga0501315_008416 3300049531 Bacteria 1199
235 Ga0501322_002524 3300049538 Bacteria 1128
236 Ga0501335_000739 3300049551 Bacteria 2250
237 Ga0501034_0039469 3300049571 Bacteria 4782
238 Ga0501225_0003635 3300049705 Bacteria 4645
239 Ga0501035_0131449 3300049822 Bacteria 2182
240 nmdc:mga0k408_7289_c1 3300050493 Bacteria 5908
241 nmdc:mga0sz30_60461_c1 3300050516 Bacteria 1618
242 Ga0500610_0000309 3300053079 Bacteria 14631
243 Ga0500643_000925 3300053087 Bacteria 18421
244 Ga0500643_004973 3300053087 Bacteria 5841
245 Ga0500643_006382 3300053087 Bacteria 4934
246 Ga0500641_0024599 3300053096 Bacteria 2323
247 Ga0500556_0000315 3300053104 Bacteria 36531
248 Ga0500562_001413 3300053108 Bacteria 5899
249 Ga0500594_0002480 3300053118 Bacteria 4015
250 Ga0500595_004864 3300053119 Bacteria 5945
251 Ga0500597_116995 3300053120 Bacteria 1156
252 Ga0500608_041899 3300053122 Bacteria 2197
253 Ga0500642_0000001 3300053130 Bacteria 1468402
254 Ga0500642_0003270 3300053130 Bacteria 4875
255 Ga0500658_0001351 3300053134 Bacteria 9926
256 Ga0500559_0001226 3300053136 Bacteria 15189
257 Ga0500559_0043856 3300053136 Bacteria 1955
258 Ga0500568_0023696 3300053139 Bacteria 2609
259 Ga0500573_0000040 3300053140 Bacteria 105074
260 Ga0500624_000008 3300053157 Bacteria 181801
261 Ga0500624_000019 3300053157 Bacteria 125903
262 Ga0500624_000051 3300053157 Bacteria 76932
263 Ga0500636_0001530 3300053177 Bacteria 12586
264 Ga0500636_0103132 3300053177 Bacteria 1619
265 Ga0500637_0000476 3300053178 Bacteria 15498
266 Ga0500645_000113 3300053730 Bacteria 64693
267 Ga0500645_001938 3300053730 Bacteria 9820
268 Ga0500661_000285 3300055283 Bacteria 9192
269 Ga0587066_015849 3300059490 Bacteria 1179
270 Ga0587077_014204 3300059493 Bacteria 1307
271 Ga0587085_003150 3300059506 Bacteria 1765
272 Ga0587092_004346 3300059512 Bacteria 1682
273 Ga0587094_011365 3300059513 Bacteria 1171
274 Ga0587101_017568 3300059623 Bacteria 993
275 Ga0587062_007433 3300059639 Bacteria 1278
276 Ga0587067_018148 3300059640 Bacteria 1176
277 Ga0587076_011764 3300059645 Bacteria 1294
278 Ga0587111_0020478 3300060346 Bacteria 1266

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300059623 Ga0587101_017568 Ga0587101_017568_54_968 255
2 3300009177 Ga0105248_10000558 Ga0105248_1000055810 274
3 iso_pu_bacteria 2599185354 2600203450 279
4 3300031456 Ga0307513_10270637 Ga0307513_102706371 280
5 3300049822 Ga0501035_0131449 Ga0501035_0131449_687_1775 283
6 3300005347 Ga0070668_100001142 Ga0070668_1000011425 287
7 3300005367 Ga0070667_100003464 Ga0070667_1000034648 287
8 3300005841 Ga0068863_100000031 Ga0068863_100000031174 287
9 3300005843 Ga0068860_100045881 Ga0068860_1000458813 287
10 3300025923 Ga0207681_10004992 Ga0207681_100049926 287
11 3300025972 Ga0207668_10000802 Ga0207668_1000080218 287
12 3300025986 Ga0207658_10002467 Ga0207658_100024675 287
13 3300026088 Ga0207641_10000483 Ga0207641_1000048342 287
14 3300028381 Ga0268264_10011725 Ga0268264_100117253 287
15 3300046524 Ga0495648_0129722 Ga0495648_0129722_248_1294 288
16 3300047472 Ga0495686_0031684 Ga0495686_0031684_1733_2839 288
17 3300053136 Ga0500559_0043856 Ga0500559_0043856_887_1939 288
18 3300013102 Ga0157371_10095527 Ga0157371_100955273 289
19 3300013105 Ga0157369_10121963 Ga0157369_101219632 289
20 3300014497 Ga0182008_10090985 Ga0182008_100909851 290
21 3300015690 Ga0183363_1007 Ga0183363_1007198 291
22 3300046460 Ga0495638_0060595 Ga0495638_0060595_16_1065 297
23 3300053140 Ga0500573_0000040 Ga0500573_0000040_66819_67928 298
24 3300009098 Ga0105245_10001565 Ga0105245_1000156510 299
25 3300013296 Ga0157374_10035670 Ga0157374_100356704 299
26 3300059490 Ga0587066_015849 Ga0587066_015849_26_1159 301
27 3300059493 Ga0587077_014204 Ga0587077_014204_149_1282 301
28 3300059506 Ga0587085_003150 Ga0587085_003150_26_1159 301
29 3300059512 Ga0587092_004346 Ga0587092_004346_26_1159 301
30 3300059513 Ga0587094_011365 Ga0587094_011365_13_1146 301
31 3300059639 Ga0587062_007433 Ga0587062_007433_123_1256 301
32 3300059640 Ga0587067_018148 Ga0587067_018148_18_1151 301
33 3300059645 Ga0587076_011764 Ga0587076_011764_136_1269 301
34 3300060346 Ga0587111_0020478 Ga0587111_0020478_24_1136 301
35 3300031548 Ga0307408_100099947 Ga0307408_1000999471 302
36 3300031731 Ga0307405_10080708 Ga0307405_100807082 302
37 3300031852 Ga0307410_10114410 Ga0307410_101144102 302
38 3300031903 Ga0307407_10164896 Ga0307407_101648961 302
39 3300031995 Ga0307409_100215392 Ga0307409_1002153921 302
40 3300032004 Ga0307414_10055505 Ga0307414_100555052 302
41 3300032126 Ga0307415_100130005 Ga0307415_1001300052 302
42 3300046492 Ga0495585_0043665 Ga0495585_0043665_516_1646 302
43 3300053730 Ga0500645_001938 Ga0500645_001938_5084_6142 303
44 3300014326 Ga0157380_10243139 Ga0157380_102431391 304
45 3300053104 Ga0500556_0000315 Ga0500556_0000315_32288_33367 304
46 3300053130 Ga0500642_0000001 Ga0500642_0000001_929327_930406 304
47 3300046691 Ga0495670_0030686 Ga0495670_0030686_129_1253 305
48 3300048926 Ga0496123_0000495 Ga0496123_0000495_61825_62886 305
49 3300048929 Ga0496126_0058484 Ga0496126_0058484_23_1084 305
50 3300053096 Ga0500641_0024599 Ga0500641_0024599_647_1771 305
51 3300013297 Ga0157378_10094345 Ga0157378_100943452 306
52 3300025927 Ga0207687_10000415 Ga0207687_1000041511 306
53 3300005539 Ga0068853_100108059 Ga0068853_1001080592 307
54 3300005842 Ga0068858_100003374 Ga0068858_10000337411 307
55 3300026035 Ga0207703_10002479 Ga0207703_100024799 307
56 iso_pu_bacteria 2830075706 2830078522 307
57 3300009101 Ga0105247_10005115 Ga0105247_1000511511 308
58 3300009553 Ga0105249_10000056 Ga0105249_1000005654 308
59 3300025941 Ga0207711_10010304 Ga0207711_100103048 308
60 3300046660 Ga0495625_0000860 Ga0495625_0000860_13412_14539 308
61 iso_pu_bacteria 2946787523 2946790940 308
62 3300031616 Ga0307508_10001326 Ga0307508_1000132621 309
63 3300046460 Ga0495638_0000048 Ga0495638_0000048_173085_174194 310
64 3300046507 Ga0495606_0090985 Ga0495606_0090985_200_1309 310
65 3300048924 Ga0496121_0131381 Ga0496121_0131381_332_1441 310
66 3300048928 Ga0496125_0021198 Ga0496125_0021198_35_1090 310
67 3300053122 Ga0500608_041899 Ga0500608_041899_1025_2098 310
68 3300053134 Ga0500658_0001351 Ga0500658_0001351_3154_4263 310
69 3300053139 Ga0500568_0023696 Ga0500568_0023696_1057_2160 310
70 3300028381 Ga0268264_10000756 Ga0268264_1000075627 311
71 3300048929 Ga0496126_0118337 Ga0496126_0118337_451_1545 311
72 3300053120 Ga0500597_116995 Ga0500597_116995_14_1075 311
73 3300053157 Ga0500624_000008 Ga0500624_000008_131659_132720 311
74 3300053178 Ga0500637_0000476 Ga0500637_0000476_7523_8584 311
75 3300005578 Ga0068854_100203043 Ga0068854_1002030432 312
76 3300031548 Ga0307408_100215210 Ga0307408_1002152101 312
77 3300031911 Ga0307412_10000348 Ga0307412_1000034810 312
78 3300032004 Ga0307414_10000105 Ga0307414_1000010522 312
79 3300032005 Ga0307411_10242266 Ga0307411_102422662 312
80 3300046557 Ga0495622_0048922 Ga0495622_0048922_217_1269 312
81 3300046692 Ga0495671_0007840 Ga0495671_0007840_1893_2945 312
82 3300053118 Ga0500594_0002480 Ga0500594_0002480_2047_3099 312
83 iso_pu_bacteria 2739367664 2739648880 312
84 iso_pu_bacteria 2739367865 2740027353 312
85 iso_pu_bacteria 2885429604 2885432634 312
86 3300039437 Ga0436365_1046139 Ga0436365_1046139_135_1280 313
87 3300049530 Ga0501314_005028 Ga0501314_005028_25_1083 313
88 3300049571 Ga0501034_0039469 Ga0501034_0039469_44_1102 313
89 3300049705 Ga0501225_0003635 Ga0501225_0003635_180_1238 313
90 3300053087 Ga0500643_004973 Ga0500643_004973_3206_4261 313
91 iso_pu_bacteria 2751185897 2753765751 313
92 3300001990 JGI24737J22298_10001740 JGI24737J22298_100017404 315
93 3300005344 Ga0070661_100309981 Ga0070661_1003099811 315
94 3300005366 Ga0070659_100298720 Ga0070659_1002987201 315
95 3300005617 Ga0068859_100147677 Ga0068859_1001476774 315
96 3300005719 Ga0068861_100000882 Ga0068861_10000088212 315
97 3300005841 Ga0068863_100001219 Ga0068863_10000121926 315
98 3300005844 Ga0068862_100000149 Ga0068862_10000014993 315
99 3300006931 Ga0097620_100147681 Ga0097620_1001476811 315
100 3300009093 Ga0105240_10294506 Ga0105240_102945062 315
101 3300009148 Ga0105243_10000308 Ga0105243_1000030849 315
102 3300013102 Ga0157371_10000011 Ga0157371_10000011232 315
103 3300020070 Ga0206356_11143413 Ga0206356_111434131 315
104 3300020080 Ga0206350_10937426 Ga0206350_109374261 315
105 3300020081 Ga0206354_11563837 Ga0206354_115638371 315
106 3300025913 Ga0207695_10015208 Ga0207695_100152085 315
107 3300025919 Ga0207657_10009444 Ga0207657_100094446 315
108 3300025920 Ga0207649_10000749 Ga0207649_1000074919 315
109 3300025924 Ga0207694_10001580 Ga0207694_100015805 315
110 3300025924 Ga0207694_10003792 Ga0207694_100037924 315
111 3300025932 Ga0207690_10000325 Ga0207690_1000032523 315
112 3300025935 Ga0207709_10000005 Ga0207709_10000005121 315
113 3300025961 Ga0207712_10000015 Ga0207712_10000015240 315
114 3300025981 Ga0207640_10019367 Ga0207640_100193672 315
115 3300026067 Ga0207678_10007422 Ga0207678_100074226 315
116 3300026078 Ga0207702_10003659 Ga0207702_100036592 315
117 3300026088 Ga0207641_10001029 Ga0207641_1000102919 315
118 3300026116 Ga0207674_10016045 Ga0207674_100160454 315
119 3300026118 Ga0207675_100002491 Ga0207675_10000249110 315
120 3300028380 Ga0268265_10000021 Ga0268265_100000214 315
121 3300028786 Ga0307517_10017144 Ga0307517_100171441 315
122 3300031911 Ga0307412_10004136 Ga0307412_100041366 315
123 3300047443 Ga0495687_061292 Ga0495687_061292_365_1495 315
124 3300048924 Ga0496121_0001202 Ga0496121_0001202_35569_36690 315
125 iso_pu_bacteria 2928027323 2928028365 315
126 iso_pu_bacteria 2984555340 2984556201 315
127 iso_pu_bacteria 2990265787 2990267879 315
128 iso_pu_bacteria 2993356040 2993356702 315
129 iso_pu_bacteria 2993693658 2993697103 315
130 iso_pu_bacteria 8057101203 8057101529 315
131 3300003214 JGI25165J46597_1000065 JGI25165J46597_1000065103 316
132 3300003215 JGI25153J46596_10000097 JGI25153J46596_1000009711 316
133 3300003759 Ga0055525_1000086 Ga0055525_1000086102 316
134 3300003762 Ga0055542_1000041 Ga0055542_1000041154 316
135 3300003763 Ga0055529_1000040 Ga0055529_1000040179 316
136 3300005327 Ga0070658_10009301 Ga0070658_100093014 316
137 3300005459 Ga0068867_100055815 Ga0068867_1000558152 316
138 3300005564 Ga0070664_100154448 Ga0070664_1001544482 316
139 3300013297 Ga0157378_10128075 Ga0157378_101280752 316
140 3300025230 Ga0209563_100024 Ga0209563_100024183 316
141 3300025254 Ga0209148_1000008 Ga0209148_1000008139 316
142 3300025261 Ga0209233_1000107 Ga0209233_1000107105 316
143 3300025272 Ga0209455_1000002 Ga0209455_10000021286 316
144 3300025297 Ga0209758_1000007 Ga0209758_1000007454 316
145 3300025909 Ga0207705_10000154 Ga0207705_1000015469 316
146 3300025940 Ga0207691_10039417 Ga0207691_100394171 316
147 3300025949 Ga0207667_10000001 Ga0207667_10000001688 316
148 3300025960 Ga0207651_10026616 Ga0207651_100266162 316
149 3300026142 Ga0207698_10003762 Ga0207698_100037625 316
150 3300031456 Ga0307513_10008387 Ga0307513_1000838712 316
151 3300031456 Ga0307513_10029351 Ga0307513_100293512 316
152 3300033180 Ga0307510_10000081 Ga0307510_1000008150 316
153 3300046501 Ga0495607_0013766 Ga0495607_0013766_2400_3518 316
154 3300046506 Ga0495583_0004543 Ga0495583_0004543_2722_3855 316
155 3300046507 Ga0495606_0000416 Ga0495606_0000416_60_1196 316
156 3300046525 Ga0495663_0004522 Ga0495663_0004522_2526_3656 316
157 3300046660 Ga0495625_0009022 Ga0495625_0009022_1742_2875 316
158 3300047323 Ga0495683_0009196 Ga0495683_0009196_2015_3145 316
159 3300047445 Ga0495677_0013067 Ga0495677_0013067_603_1736 316
160 3300053108 Ga0500562_001413 Ga0500562_001413_3384_4421 316
161 3300053130 Ga0500642_0003270 Ga0500642_0003270_3621_4751 316
162 3300053177 Ga0500636_0103132 Ga0500636_0103132_238_1299 316
163 3300005288 Ga0065714_10011632 Ga0065714_100116324 317
164 3300005328 Ga0070676_10043786 Ga0070676_100437862 317
165 3300005364 Ga0070673_100039690 Ga0070673_1000396902 317
166 3300005367 Ga0070667_100087800 Ga0070667_1000878001 317
167 3300005457 Ga0070662_100090550 Ga0070662_1000905502 317
168 3300005548 Ga0070665_100000043 Ga0070665_1000000431 317
169 3300005618 Ga0068864_100003105 Ga0068864_10000310511 317
170 3300013306 Ga0163162_10182037 Ga0163162_101820372 317
171 3300025315 Ga0207697_10005019 Ga0207697_100050192 317
172 3300025907 Ga0207645_10119884 Ga0207645_101198842 317
173 3300025933 Ga0207706_10174661 Ga0207706_101746611 317
174 3300026095 Ga0207676_10000730 Ga0207676_1000073013 317
175 3300026118 Ga0207675_100218888 Ga0207675_1002188881 317
176 3300028379 Ga0268266_10000002 Ga0268266_10000002586 317
177 3300038443 Ga0395901_0179686 Ga0395901_0179686_1042_2169 317
178 3300046471 Ga0495650_0000096 Ga0495650_0000096_8400_9530 317
179 3300046522 Ga0495643_0001368 Ga0495643_0001368_21599_22729 317
180 3300046522 Ga0495643_0006530 Ga0495643_0006530_503_1633 317
181 3300046524 Ga0495648_0000065 Ga0495648_0000065_130047_131174 317
182 3300046528 Ga0495642_0006834 Ga0495642_0006834_2737_3867 317
183 3300046542 Ga0495597_0019321 Ga0495597_0019321_1839_2966 317
184 3300046616 Ga0495668_0000022 Ga0495668_0000022_293626_294753 317
185 3300046660 Ga0495625_0000212 Ga0495625_0000212_30829_31959 317
186 3300046684 Ga0495669_0000069 Ga0495669_0000069_60310_61446 317
187 3300046809 Ga0495600_0000992 Ga0495600_0000992_955_2085 317
188 3300047323 Ga0495683_0005840 Ga0495683_0005840_427_1554 317
189 3300047445 Ga0495677_0000976 Ga0495677_0000976_555_1685 317
190 3300047472 Ga0495686_0000238 Ga0495686_0000238_28614_29735 317
191 3300048905 Ga0496102_0000022 Ga0496102_0000022_234852_235979 317
192 3300048906 Ga0496103_0000671 Ga0496103_0000671_5094_6221 317
193 3300048907 Ga0496104_0000924 Ga0496104_0000924_4594_5721 317
194 3300048908 Ga0496105_0013617 Ga0496105_0013617_3565_4692 317
195 3300048913 Ga0496110_0007701 Ga0496110_0007701_5118_6245 317
196 3300048917 Ga0496114_0002319 Ga0496114_0002319_6804_7931 317
197 3300048918 Ga0496115_0000651 Ga0496115_0000651_5339_6466 317
198 3300048919 Ga0496116_0013768 Ga0496116_0013768_2570_3697 317
199 3300048920 Ga0496117_0000046 Ga0496117_0000046_280247_281374 317
200 3300048921 Ga0496118_0000036 Ga0496118_0000036_19506_20633 317
201 3300048922 Ga0496119_0014304 Ga0496119_0014304_2668_3795 317
202 3300048923 Ga0496120_0025626 Ga0496120_0025626_1488_2615 317
203 3300048924 Ga0496121_0000702 Ga0496121_0000702_50338_51465 317
204 3300048925 Ga0496122_0015295 Ga0496122_0015295_2193_3320 317
205 3300048926 Ga0496123_0003433 Ga0496123_0003433_1243_2370 317
206 3300048927 Ga0496124_0000011 Ga0496124_0000011_503513_504640 317
207 3300048928 Ga0496125_0000309 Ga0496125_0000309_13354_14481 317
208 3300048929 Ga0496126_0000771 Ga0496126_0000771_19506_20633 317
209 3300050493 nmdc:mga0k408_7289_c1 nmdc:mga0k408_7289_c1_4250_5374 317
210 3300050516 nmdc:mga0sz30_60461_c1 nmdc:mga0sz30_60461_c1_434_1561 317
211 3300053079 Ga0500610_0000309 Ga0500610_0000309_1083_2213 317
212 3300053119 Ga0500595_004864 Ga0500595_004864_3609_4739 317
213 3300053177 Ga0500636_0001530 Ga0500636_0001530_7768_8898 317
214 3300053730 Ga0500645_000113 Ga0500645_000113_1874_3004 317
215 3300013297 Ga0157378_10070558 Ga0157378_100705582 318
216 iso_pu_bacteria 2738541275 2738711970 318
217 iso_pu_bacteria 2738541301 2738850395 318
218 iso_pu_bacteria 2738541304 2738866124 318
219 iso_pu_bacteria 2738543022 2739298642 318
220 iso_pu_bacteria 2738543033 2739360320 318
221 iso_pu_bacteria 2928100450 2928103545 318
222 iso_pu_bacteria 2928959182 2928962912 318
223 3300005328 Ga0070676_10147786 Ga0070676_101477862 319
224 3300028786 Ga0307517_10006881 Ga0307517_1000688112 319
225 3300046524 Ga0495648_0035141 Ga0495648_0035141_1147_2208 319
226 3300046558 Ga0495633_0000724 Ga0495633_0000724_2417_3475 319
227 3300048911 Ga0496108_0004646 Ga0496108_0004646_6004_7173 319
228 3300048928 Ga0496125_0020743 Ga0496125_0020743_4645_5817 319
229 3300048929 Ga0496126_0010259 Ga0496126_0010259_1990_3162 319
230 3300017792 Ga0163161_10025251 Ga0163161_100252513 321
231 3300025961 Ga0207712_10091879 Ga0207712_100918791 321
232 3300046460 Ga0495638_0000011 Ga0495638_0000011_225529_226599 321
233 3300046471 Ga0495650_0001338 Ga0495650_0001338_16228_17289 321
234 3300046506 Ga0495583_0000077 Ga0495583_0000077_19623_20693 321
235 3300046519 Ga0495632_0000834 Ga0495632_0000834_16415_17485 321
236 3300046524 Ga0495648_0000023 Ga0495648_0000023_23249_24319 321
237 3300046558 Ga0495633_0058545 Ga0495633_0058545_705_1775 321
238 3300046648 Ga0495611_0051203 Ga0495611_0051203_685_1752 321
239 3300046692 Ga0495671_0000012 Ga0495671_0000012_206474_207544 321
240 3300047469 Ga0495673_0000029 Ga0495673_0000029_151089_152159 321
241 3300053087 Ga0500643_000925 Ga0500643_000925_6101_7168 321
242 3300053136 Ga0500559_0001226 Ga0500559_0001226_4722_5789 321
243 3300055283 Ga0500661_000285 Ga0500661_000285_2419_3486 321
244 3300005539 Ga0068853_100049762 Ga0068853_1000497621 322
245 3300025321 Ga0207656_10021698 Ga0207656_100216981 322
246 3300026041 Ga0207639_10000468 Ga0207639_1000046810 322
247 3300048928 Ga0496125_0032256 Ga0496125_0032256_2285_3358 322
248 3300046453 Ga0495627_000268 Ga0495627_000268_723_1796 323
249 3300046512 Ga0495610_0000697 Ga0495610_0000697_13699_14772 323
250 3300046518 Ga0495631_0090397 Ga0495631_0090397_88_1161 323
251 3300046520 Ga0495637_0018427 Ga0495637_0018427_1673_2746 323
252 3300047470 Ga0495681_0000129 Ga0495681_0000129_52082_53134 323
253 3300047472 Ga0495686_0109432 Ga0495686_0109432_343_1416 323
254 3300053087 Ga0500643_006382 Ga0500643_006382_3220_4293 323
255 3300053157 Ga0500624_000051 Ga0500624_000051_6335_7408 323
256 3300002067 JGI24735J21928_10006713 JGI24735J21928_100067134 324
257 3300005455 Ga0070663_100113113 Ga0070663_1001131132 324
258 3300025919 Ga0207657_10062626 Ga0207657_100626263 324
259 3300025920 Ga0207649_10059268 Ga0207649_100592683 324
260 3300025924 Ga0207694_10163188 Ga0207694_101631882 324
261 3300048924 Ga0496121_0003564 Ga0496121_0003564_10499_11686 324
262 3300049551 Ga0501335_000739 Ga0501335_000739_723_1811 324
263 3300001989 JGI24739J22299_10011872 JGI24739J22299_100118723 325
264 3300053157 Ga0500624_000019 Ga0500624_000019_118697_119749 325
265 iso_pu_bacteria 2808606401 2809061946 326
266 iso_pu_bacteria 2808606404 2809077910 326
267 iso_pu_bacteria 2808606405 2809082382 326
268 iso_pu_bacteria 2880518877 2880519870 326
269 iso_pu_bacteria 2919709256 2919710185 326
270 3300026035 Ga0207703_10006650 Ga0207703_100066506 327
271 3300048922 Ga0496119_0151831 Ga0496119_0151831_37_1113 327
272 3300046519 Ga0495632_0000039 Ga0495632_0000039_62390_63469 328
273 3300046520 Ga0495637_0001499 Ga0495637_0001499_10828_11907 328
274 3300046522 Ga0495643_0000162 Ga0495643_0000162_62162_63241 328
275 3300046525 Ga0495663_0000006 Ga0495663_0000006_62473_63552 328
276 3300046558 Ga0495633_0000600 Ga0495633_0000600_9485_10564 328
277 3300046692 Ga0495671_0000062 Ga0495671_0000062_62162_63241 328
278 3300047470 Ga0495681_0015743 Ga0495681_0015743_1738_2817 328
279 3300047472 Ga0495686_0049691 Ga0495686_0049691_1003_2082 328
280 3300049538 Ga0501322_002524 Ga0501322_002524_27_1103 329
281 iso_pu_bacteria 2775507255 2778123594 329
282 3300048925 Ga0496122_0080353 Ga0496122_0080353_586_1662 332
283 3300048926 Ga0496123_0061110 Ga0496123_0061110_364_1440 332
284 3300048927 Ga0496124_0080009 Ga0496124_0080009_1251_2327 332
285 3300001979 JGI24740J21852_10001672 JGI24740J21852_100016727 333
286 3300005331 Ga0070670_100045757 Ga0070670_1000457574 333
287 3300005353 Ga0070669_100051414 Ga0070669_1000514144 333
288 3300005578 Ga0068854_100201624 Ga0068854_1002016242 333
289 3300005618 Ga0068864_100195499 Ga0068864_1001954992 333
290 3300025229 Ga0209147_100889 Ga0209147_1008896 333
291 3300025923 Ga0207681_10046171 Ga0207681_100461711 333
292 3300025925 Ga0207650_10047378 Ga0207650_100473784 333
293 3300026041 Ga0207639_10013552 Ga0207639_100135525 333
294 3300026067 Ga0207678_10000084 Ga0207678_1000008422 333
295 3300026078 Ga0207702_10040160 Ga0207702_100401603 333
296 3300026095 Ga0207676_10104620 Ga0207676_101046203 333
297 3300031731 Ga0307405_10018399 Ga0307405_100183996 333
298 3300031901 Ga0307406_10008116 Ga0307406_100081163 333
299 3300032002 Ga0307416_100002729 Ga0307416_1000027295 333
300 3300032005 Ga0307411_10006851 Ga0307411_100068516 333
301 3300046453 Ga0495627_000410 Ga0495627_000410_7432_8508 333
302 3300048927 Ga0496124_0105254 Ga0496124_0105254_1135_2208 333
303 3300048928 Ga0496125_0167113 Ga0496125_0167113_364_1440 333
304 3300049531 Ga0501315_008416 Ga0501315_008416_25_1119 333

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00691

OmpA

OmpA family

264

359

0.96

PF01617

Surface_Ag_2

Surface antigen

30

203

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
5u1h-assembly3.cif.gz_C crystal structure of the c-terminal peptidoglycan binding domain of oprf (pa1777) from pseudomonas aeruginosa 0.8784 221 327
5n2c-assembly1.cif.gz_A crystal structure of the peptidoglycan-associated lipoprotein from burkholderia cenocepacia 0.8748 223 329
4g4x-assembly1.cif.gz_A crystal structure of peptidoglycan-associated lipoprotein from acinetobacter baumannii 0.8746 221 328
4zhw-assembly1.cif.gz_A crystal structure of a bacterial signalling protein (n-terminal truncation) 0.8729 223 329
4pwt-assembly3.cif.gz_C crystal structure of peptidoglycan-associated outer membrane lipoprotein from yersinia pestis co92 0.8677 223 327
ID Description Score Start End Superfamily
5u1hB00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain 0.8828 221 327 3.30.1330.60
4zhwA00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain 0.8729 223 329 3.30.1330.60
4pwtC00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain 0.8642 223 327 3.30.1330.60
3td4B00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain 0.8614 221 327 3.30.1330.60
5y61D00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain 0.8507 225 329 3.30.1330.60
ID Description Score Start End GO Terms
AF-A0A6A7KM00-F1-model_v4 OmpA family protein 0.9203 222 328 GO:0009279
AF-A0A427L2I8-F1-model_v4 OmpA family protein 0.914 221 327 GO:0009279
AF-A0A2D9F4Y8-F1-model_v4 OmpA-like domain-containing protein 0.9121 220 329 GO:0009279
AF-A0A7Y6UDY6-F1-model_v4 OmpA family protein 0.9105 224 328 GO:0009279
AF-A0A651F731-F1-model_v4 OmpA family protein 0.9099 221 325 GO:0009279

Feature Viewer

pLDDT pTM Quality
72.44 0.56 Medium
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Predicted Structure (AlphaFold2)

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