F397960

General Info

Members Datasets Scaffolds Average Seq Length
305 193 610 205

Family's Representative Sequence

Representative Sequence 3300005356|Ga0070674_100093679|Ga0070674_1000936792
Length 244
Sequence MACSRWILEFSGFTLPCRKRQFGPGLQRATALVGLSMSEDYVFVVDDDADIRDSMRLLLEVAGFKVRSYNSAKHFLADEHPKHGCLVADIRMPDMSGLELQLEVIRRHIELPVIIMTGHGDVPLAVQAMKAGAIDFLEKPFEEEIMLTSVRRAMEIGSRARGRAEEAKAAKDLLSSLTPRERSVLEKLVQGQSNKVVAFELGISPRTVEIHRAHIMDKMEASSLSDLVRVVLTAEPEFAGRTIN

Samples

Sample ID Description Type Environment
1 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
2 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
8 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
34 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
35 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
58 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
59 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
60 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
61 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
102 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
103 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
104 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
105 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
106 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
107 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
108 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
109 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
110 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
111 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
112 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
113 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
114 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
115 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
116 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
117 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
118 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
119 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
122 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
123 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
124 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
125 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
126 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
127 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
128 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
129 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
130 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
131 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
132 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
133 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
134 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
135 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
136 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
137 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
138 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
139 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
140 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
141 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
142 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
143 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
144 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
145 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
146 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
147 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
148 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
149 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
150 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
151 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
152 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
153 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
154 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
155 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
156 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
157 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
158 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
159 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
160 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
161 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
162 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
163 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
164 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
165 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
166 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
167 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
168 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
169 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
170 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
171 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
177 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
179 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
180 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
181 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
182 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
183 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
184 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
185 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
186 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
187 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
188 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
189 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
190 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
191 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
192 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
193 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.67
Metatranscriptomes 0
Isolates 0.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.8
Nodule 0
Rhizoplane 5.25
Rhizosphere 77.38
Stem 0
Stem Tuber 0
Unclassified 2.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070674_100093679 3300005356 Bacteria 2174
2 JGI25157J39369_1006195 3300002741 Bacteria 1852
3 JGI25165J46597_1000017 3300003214 Bacteria 377013
4 JGI25153J46596_10001195 3300003215 Bacteria 15692
5 Ga0055530_10031691 3300003791 Bacteria 1384
6 Ga0055531_10004015 3300003794 Bacteria 9125
7 Ga0055543_1009747 3300004625 Bacteria 2045
8 Ga0065165_1001653 3300005262 Bacteria 22606
9 Ga0065165_1010018 3300005262 Bacteria 4165
10 Ga0070658_10027937 3300005327 Bacteria 4528
11 Ga0070658_10080371 3300005327 Bacteria 2678
12 Ga0070658_10203822 3300005327 Bacteria 1670
13 Ga0068869_100015264 3300005334 Bacteria 5149
14 Ga0070666_10000891 3300005335 Bacteria 18178
15 Ga0070661_100788120 3300005344 Bacteria 779
16 Ga0070668_100001049 3300005347 Bacteria 19395
17 Ga0070669_100087161 3300005353 Bacteria 2334
18 Ga0070671_100070727 3300005355 Bacteria 2911
19 Ga0070671_100195042 3300005355 Bacteria 1717
20 Ga0070673_100262497 3300005364 Unclassified 1509
21 Ga0070667_100007935 3300005367 Bacteria 8804
22 Ga0070667_100128087 3300005367 Bacteria 2214
23 Ga0070714_100015746 3300005435 Bacteria 6091
24 Ga0070678_100018512 3300005456 Bacteria 4515
25 Ga0068853_100363264 3300005539 Bacteria 1349
26 Ga0070665_100024739 3300005548 Bacteria 6049
27 Ga0070665_100031931 3300005548 Bacteria 5301
28 Ga0070665_100034388 3300005548 Bacteria 5097
29 Ga0070665_100084134 3300005548 Bacteria 3186
30 Ga0070665_100181112 3300005548 Bacteria 2108
31 Ga0068855_100037345 3300005563 Bacteria 5777
32 Ga0068857_100030425 3300005577 Bacteria 4767
33 Ga0068856_100266042 3300005614 Bacteria 1730
34 Ga0068856_101145051 3300005614 Bacteria 795
35 Ga0068859_100001468 3300005617 Bacteria 24015
36 Ga0068859_100295481 3300005617 Bacteria 1713
37 Ga0068864_100000110 3300005618 Bacteria 80031
38 Ga0068864_100015617 3300005618 Bacteria 6316
39 Ga0068864_100104505 3300005618 Bacteria 2516
40 Ga0068861_100244538 3300005719 Bacteria 1528
41 Ga0068870_10083389 3300005840 Bacteria 1772
42 Ga0068863_100000316 3300005841 Bacteria 49065
43 Ga0068863_100002212 3300005841 Bacteria 19315
44 Ga0068863_100010690 3300005841 Bacteria 8913
45 Ga0068863_100058698 3300005841 Bacteria 3641
46 Ga0068858_100000224 3300005842 Bacteria 61485
47 Ga0068858_100004953 3300005842 Bacteria 13048
48 Ga0068858_100038753 3300005842 Bacteria 4420
49 Ga0068860_100019063 3300005843 Bacteria 6661
50 Ga0070717_10021764 3300006028 Bacteria 5057
51 Ga0075368_10208446 3300006042 Bacteria 828
52 Ga0075363_100120964 3300006048 Bacteria 1462
53 Ga0075363_100209864 3300006048 Bacteria 1114
54 Ga0075362_10129604 3300006177 Bacteria 1198
55 Ga0075362_10291486 3300006177 Bacteria 808
56 Ga0075370_10118913 3300006353 Bacteria 1537
57 Ga0097620_100001468 3300006931 Bacteria 24015
58 Ga0097620_100295489 3300006931 Bacteria 1713
59 Ga0105240_10008146 3300009093 Bacteria 15030
60 Ga0105240_10027073 3300009093 Bacteria 7514
61 Ga0105240_10096522 3300009093 Bacteria 3602
62 Ga0105240_10254910 3300009093 Bacteria 2027
63 Ga0105245_10076064 3300009098 Bacteria 3057
64 Ga0105245_10135235 3300009098 Bacteria 2316
65 Ga0105247_10090333 3300009101 Bacteria 1943
66 Ga0105243_10007695 3300009148 Bacteria 8281
67 Ga0105241_10111382 3300009174 Bacteria 2191
68 Ga0105241_10841590 3300009174 Bacteria 848
69 Ga0105242_10039084 3300009176 Bacteria 3818
70 Ga0105242_10163126 3300009176 Bacteria 1952
71 Ga0105248_10002725 3300009177 Bacteria 19624
72 Ga0105248_10005133 3300009177 Bacteria 14449
73 Ga0105248_10006301 3300009177 Bacteria 13019
74 Ga0105248_10048650 3300009177 Bacteria 4756
75 Ga0105248_10161441 3300009177 Bacteria 2528
76 Ga0105237_10020398 3300009545 Bacteria 6834
77 Ga0105237_10131726 3300009545 Bacteria 2495
78 Ga0105237_10616361 3300009545 Bacteria 1092
79 Ga0105238_10009348 3300009551 Bacteria 9818
80 Ga0105238_10011059 3300009551 Bacteria 9071
81 Ga0105238_10022926 3300009551 Bacteria 6364
82 Ga0105249_10003801 3300009553 Bacteria 13034
83 Ga0105249_11923927 3300009553 Bacteria 664
84 Ga0105239_10060367 3300010375 Bacteria 4162
85 Ga0105239_10185556 3300010375 Bacteria 2327
86 Ga0105239_10418142 3300010375 Bacteria 1518
87 Ga0105239_11297537 3300010375 Bacteria 840
88 Ga0157374_11154720 3300013296 Bacteria 795
89 Ga0157378_10070733 3300013297 Bacteria 3133
90 Ga0163162_10019103 3300013306 Bacteria 6721
91 Ga0163162_10742455 3300013306 Bacteria 1101
92 Ga0163162_10809057 3300013306 Bacteria 1054
93 Ga0157375_10034803 3300013308 Bacteria 4801
94 Ga0157375_10073584 3300013308 Bacteria 3436
95 Ga0157375_10294499 3300013308 Bacteria 1786
96 Ga0163163_10299613 3300014325 Bacteria 1660
97 Ga0163163_10394136 3300014325 Bacteria 1443
98 Ga0163163_10592235 3300014325 Bacteria 1172
99 Ga0163163_10718740 3300014325 Bacteria 1062
100 Ga0157377_10088762 3300014745 Unclassified 1821
101 Ga0157379_10022083 3300014968 Bacteria 5640
102 Ga0157379_10094671 3300014968 Bacteria 2680
103 Ga0157379_10099949 3300014968 Bacteria 2604
104 Ga0157379_10926383 3300014968 Bacteria 828
105 Ga0157376_10669871 3300014969 Bacteria 1040
106 Ga0207427_103610 3300025231 Bacteria 3131
107 Ga0209026_1001883 3300025250 Bacteria 8536
108 Ga0209233_1000006 3300025261 Bacteria 1473685
109 Ga0209233_1004034 3300025261 Bacteria 5085
110 Ga0209758_1000013 3300025297 Bacteria 873003
111 Ga0209758_1015546 3300025297 Bacteria 3929
112 Ga0209050_1000038 3300025298 Bacteria 412635
113 Ga0209257_1000850 3300025304 Bacteria 43660
114 Ga0209257_1001322 3300025304 Bacteria 30145
115 Ga0209257_1008553 3300025304 Bacteria 5773
116 Ga0207692_10414995 3300025898 Bacteria 842
117 Ga0207710_10043913 3300025900 Bacteria 1989
118 Ga0207688_10040021 3300025901 Unclassified 2604
119 Ga0207680_10000321 3300025903 Bacteria 22952
120 Ga0207680_10226051 3300025903 Bacteria 1285
121 Ga0207645_10026717 3300025907 Bacteria 3729
122 Ga0207643_10094440 3300025908 Bacteria 1747
123 Ga0207705_10204211 3300025909 Bacteria 1497
124 Ga0207654_10040004 3300025911 Bacteria 2640
125 Ga0207654_10138241 3300025911 Bacteria 1550
126 Ga0207654_10728340 3300025911 Bacteria 713
127 Ga0207695_10017098 3300025913 Bacteria 8457
128 Ga0207695_10022091 3300025913 Bacteria 7237
129 Ga0207671_10121748 3300025914 Bacteria 1995
130 Ga0207671_10285462 3300025914 Bacteria 1302
131 Ga0207693_10723133 3300025915 Bacteria 770
132 Ga0207657_10051697 3300025919 Bacteria 3571
133 Ga0207694_10115205 3300025924 Bacteria 2141
134 Ga0207694_10177029 3300025924 Bacteria 1728
135 Ga0207694_10429129 3300025924 Bacteria 1102
136 Ga0207650_10116618 3300025925 Bacteria 2074
137 Ga0207687_10492837 3300025927 Bacteria 1022
138 Ga0207700_10575812 3300025928 Bacteria 1001
139 Ga0207664_10075363 3300025929 Unclassified 2728
140 Ga0207644_10047208 3300025931 Bacteria 3071
141 Ga0207644_11003927 3300025931 Bacteria 700
142 Ga0207709_10019886 3300025935 Bacteria 3781
143 Ga0207711_10000331 3300025941 Bacteria 50472
144 Ga0207711_10003760 3300025941 Bacteria 13070
145 Ga0207711_10013517 3300025941 Bacteria 6778
146 Ga0207711_10066806 3300025941 Bacteria 3110
147 Ga0207689_10059907 3300025942 Bacteria 3131
148 Ga0207679_10857150 3300025945 Bacteria 830
149 Ga0207667_10280808 3300025949 Bacteria 1701
150 Ga0207667_10458947 3300025949 Bacteria 1294
151 Ga0207651_10156020 3300025960 Bacteria 1783
152 Ga0207668_10014860 3300025972 Bacteria 4826
153 Ga0207658_10076081 3300025986 Bacteria 2556
154 Ga0207658_10173394 3300025986 Bacteria 1779
155 Ga0207703_10000245 3300026035 Bacteria 61514
156 Ga0207703_10006327 3300026035 Bacteria 9466
157 Ga0207703_10029995 3300026035 Bacteria 4295
158 Ga0207678_10062025 3300026067 Bacteria 3215
159 Ga0207641_10000134 3300026088 Bacteria 109053
160 Ga0207641_10004948 3300026088 Bacteria 11437
161 Ga0207641_10041847 3300026088 Bacteria 3841
162 Ga0207641_10188871 3300026088 Bacteria 1892
163 Ga0207648_10003899 3300026089 Bacteria 15560
164 Ga0207676_10000712 3300026095 Bacteria 26130
165 Ga0207676_10008284 3300026095 Bacteria 7390
166 Ga0207676_10176543 3300026095 Bacteria 1866
167 Ga0207674_10219480 3300026116 Bacteria 1849
168 Ga0207675_100119041 3300026118 Bacteria 2498
169 Ga0207683_10044512 3300026121 Bacteria 3880
170 Ga0207683_10053257 3300026121 Bacteria 3547
171 Ga0207698_10195934 3300026142 Bacteria 1805
172 Ga0207698_10781545 3300026142 Bacteria 956
173 Ga0209813_10161256 3300027866 Bacteria 809
174 Ga0268266_10008509 3300028379 Bacteria 9119
175 Ga0268266_10048748 3300028379 Bacteria 3631
176 Ga0268266_10055838 3300028379 Bacteria 3396
177 Ga0268266_10059946 3300028379 Bacteria 3279
178 Ga0268266_10294569 3300028379 Bacteria 1512
179 Ga0268264_10253641 3300028381 Bacteria 1635
180 Ga0268264_10317051 3300028381 Bacteria 1473
181 Ga0307517_10146816 3300028786 Bacteria 1633
182 Ga0307515_10026669 3300028794 Bacteria 9929
183 Ga0307515_10076639 3300028794 Bacteria 4431
184 Ga0265338_10022583 3300028800 Bacteria 6506
185 Ga0265324_10016453 3300029957 Unclassified 2700
186 Ga0307511_10016123 3300030521 Bacteria 7218
187 Ga0265320_10000102 3300031240 Bacteria 72957
188 Ga0265325_10002993 3300031241 Bacteria 11211
189 Ga0265325_10014855 3300031241 Bacteria 4390
190 Ga0265325_10125142 3300031241 Bacteria 1236
191 Ga0265325_10138577 3300031241 Bacteria 1159
192 Ga0265340_10046581 3300031247 Bacteria 2115
193 Ga0265340_10136427 3300031247 Bacteria 1123
194 Ga0265339_10028712 3300031249 Bacteria 3161
195 Ga0265339_10076314 3300031249 Bacteria 1777
196 Ga0265339_10129349 3300031249 Bacteria 1292
197 Ga0265331_10008516 3300031250 Bacteria 5829
198 Ga0265331_10020197 3300031250 Bacteria 3425
199 Ga0265331_10082853 3300031250 Bacteria 1488
200 Ga0265327_10008903 3300031251 Bacteria 7368
201 Ga0307513_10000588 3300031456 Bacteria 52189
202 Ga0307513_10002138 3300031456 Bacteria 27705
203 Ga0307509_10534840 3300031507 Bacteria 852
204 Ga0265313_10068538 3300031595 Bacteria 1639
205 Ga0307508_10284205 3300031616 Bacteria 1248
206 Ga0265314_10000796 3300031711 Bacteria 37442
207 Ga0265314_10001109 3300031711 Bacteria 31102
208 Ga0265314_10011547 3300031711 Bacteria 7277
209 Ga0265314_10027781 3300031711 Bacteria 4230
210 Ga0265314_10216630 3300031711 Bacteria 1120
211 Ga0265342_10011601 3300031712 Bacteria 6017
212 Ga0265342_10061409 3300031712 Bacteria 2214
213 Ga0307516_10000022 3300031730 Bacteria 191854
214 Ga0307516_10069205 3300031730 Bacteria 3396
215 Ga0307412_10641129 3300031911 Bacteria 905
216 Ga0307414_10013160 3300032004 Bacteria 4918
217 Ga0307411_10160458 3300032005 Bacteria 1683
218 Ga0373940_0021522 3300035088 Bacteria 1649
219 Ga0373936_0001620 3300035113 Bacteria 8232
220 Ga0373943_0037912 3300035170 Bacteria 2315
221 Ga0373931_0122101 3300035691 Bacteria 1490
222 Ga0373935_0045580 3300035692 Bacteria 2767
223 Ga0373927_0451669 3300035695 Bacteria 849
224 Ga0373947_0083940 3300035725 Bacteria 1976
225 Ga0373937_0096302 3300036401 Bacteria 2745
226 Ga0395905_0046308 3300037471 Bacteria 4078
227 Ga0395905_0130053 3300037471 Bacteria 2368
228 Ga0395905_0261993 3300037471 Bacteria 1614
229 Ga0395905_0446680 3300037471 Bacteria 1191
230 Ga0436365_1212532 3300039437 Bacteria 4954
231 Ga0436360_0070765 3300039438 Bacteria 3174
232 Ga0436360_0407363 3300039438 Bacteria 2360
233 Ga0436361_0339201 3300039447 Bacteria 1390
234 Ga0453684_0071807 3300044712 Bacteria 4374
235 Ga0466959_0218656 3300045049 Unclassified 1322
236 Ga0495592_0284557 3300046454 Bacteria 1080
237 Ga0495590_0001131 3300046457 Bacteria 11677
238 Ga0495651_0202555 3300046462 Bacteria 1388
239 Ga0495650_0087565 3300046471 Bacteria 1190
240 Ga0495594_0112414 3300046499 Bacteria 1536
241 Ga0495610_0000611 3300046512 Bacteria 35413
242 Ga0495648_0000067 3300046524 Bacteria 140250
243 Ga0495648_0185484 3300046524 Bacteria 1054
244 Ga0495663_0045725 3300046525 Bacteria 1343
245 Ga0495642_0003668 3300046528 Bacteria 6025
246 Ga0495640_0531643 3300046533 Bacteria 714
247 Ga0495609_0064911 3300046538 Bacteria 1610
248 Ga0495668_0015497 3300046616 Bacteria 4449
249 Ga0495668_0078393 3300046616 Bacteria 1814
250 Ga0495668_0151793 3300046616 Bacteria 1269
251 Ga0495668_0452403 3300046616 Bacteria 707
252 Ga0495611_0028094 3300046648 Bacteria 2462
253 Ga0495599_0263330 3300046678 Bacteria 1047
254 Ga0495669_0030118 3300046684 Bacteria 2382
255 Ga0495613_0215284 3300046689 Bacteria 1350
256 Ga0495581_0084233 3300047315 Bacteria 1842
257 Ga0495672_0044756 3300047320 Bacteria 2653
258 Ga0495673_0001006 3300047469 Bacteria 24938
259 Ga0496102_0123203 3300048905 Bacteria 2422
260 Ga0496104_0093743 3300048907 Bacteria 2872
261 Ga0496105_0053506 3300048908 Bacteria 3334
262 Ga0496106_0757925 3300048909 Bacteria 771
263 Ga0496108_0325989 3300048911 Bacteria 1339
264 Ga0496108_0478496 3300048911 Bacteria 1088
265 Ga0496109_0027586 3300048912 Bacteria 5072
266 Ga0496109_0498906 3300048912 Bacteria 1149
267 Ga0496110_0243120 3300048913 Bacteria 1638
268 Ga0496111_0675289 3300048914 Bacteria 753
269 Ga0496112_0088348 3300048915 Bacteria 3067
270 Ga0496112_0249837 3300048915 Bacteria 1725
271 Ga0496112_0320805 3300048915 Bacteria 1493
272 Ga0496113_0413106 3300048916 Bacteria 1084
273 Ga0496113_0527151 3300048916 Bacteria 948
274 Ga0496114_0578062 3300048917 Bacteria 992
275 Ga0496116_0303471 3300048919 Bacteria 758
276 Ga0496117_0037597 3300048920 Bacteria 3604
277 Ga0496118_0003291 3300048921 Bacteria 20547
278 Ga0496121_0000135 3300048924 Bacteria 165485
279 Ga0495678_000322 3300049459 Bacteria 51143
280 Ga0501034_0001509 3300049571 Bacteria 30551
281 Ga0501034_0105142 3300049571 Bacteria 2816
282 Ga0501034_0225519 3300049571 Bacteria 1825
283 Ga0501037_0019208 3300049573 Bacteria 5037
284 Ga0501043_0172879 3300049579 Bacteria 1685
285 Ga0501047_0074923 3300049581 Bacteria 3258
286 Ga0501048_0203638 3300049582 Bacteria 1403
287 Ga0501073_0509315 3300049589 Bacteria 832
288 Ga0501035_0218105 3300049822 Bacteria 1630
289 Ga0501044_0002769 3300049823 Bacteria 19965
290 Ga0501044_0359752 3300049823 Bacteria 1374
291 nmdc:mga03683_29235_c1 3300050489 Bacteria 2196
292 nmdc:mga0k408_178418_c1 3300050493 Bacteria 1267
293 nmdc:mga04h51_186673_c1 3300050495 Bacteria 809
294 nmdc:mga07m45_142_c1 3300050496 Bacteria 29009
295 Ga0495619_0002385 3300053085 Bacteria 12343
296 Ga0500644_0000599 3300053088 Bacteria 13774
297 Ga0500555_005097 3300053103 Bacteria 3728
298 Ga0500562_031359 3300053108 Bacteria 1402
299 Ga0500594_0003492 3300053118 Bacteria 3457
300 Ga0500564_000129 3300053138 Bacteria 19265
301 Ga0500573_0000033 3300053140 Bacteria 117720
302 Ga0500588_0008124 3300053146 Bacteria 2441
303 Ga0500622_0000596 3300053156 Bacteria 32837
304 Ga0500645_021179 3300053730 Unclassified 2008
305 2585146553 2582581279 Bacteria 4980720
306 Ga0070674_100093679
307 JGI25157J39369_1006195
308 JGI25165J46597_1000017
309 JGI25153J46596_10001195
310 Ga0055530_10031691
311 Ga0055531_10004015
312 Ga0055543_1009747
313 Ga0065165_1001653
314 Ga0065165_1010018
315 Ga0070658_10027937
316 Ga0070658_10080371
317 Ga0070658_10203822
318 Ga0068869_100015264
319 Ga0070666_10000891
320 Ga0070661_100788120
321 Ga0070668_100001049
322 Ga0070669_100087161
323 Ga0070671_100070727
324 Ga0070671_100195042
325 Ga0070673_100262497
326 Ga0070667_100007935
327 Ga0070667_100128087
328 Ga0070714_100015746
329 Ga0070678_100018512
330 Ga0068853_100363264
331 Ga0070665_100024739
332 Ga0070665_100031931
333 Ga0070665_100034388
334 Ga0070665_100084134
335 Ga0070665_100181112
336 Ga0068855_100037345
337 Ga0068857_100030425
338 Ga0068856_100266042
339 Ga0068856_101145051
340 Ga0068859_100001468
341 Ga0068859_100295481
342 Ga0068864_100000110
343 Ga0068864_100015617
344 Ga0068864_100104505
345 Ga0068861_100244538
346 Ga0068870_10083389
347 Ga0068863_100000316
348 Ga0068863_100002212
349 Ga0068863_100010690
350 Ga0068863_100058698
351 Ga0068858_100000224
352 Ga0068858_100004953
353 Ga0068858_100038753
354 Ga0068860_100019063
355 Ga0070717_10021764
356 Ga0075368_10208446
357 Ga0075363_100120964
358 Ga0075363_100209864
359 Ga0075362_10129604
360 Ga0075362_10291486
361 Ga0075370_10118913
362 Ga0097620_100001468
363 Ga0097620_100295489
364 Ga0105240_10008146
365 Ga0105240_10027073
366 Ga0105240_10096522
367 Ga0105240_10254910
368 Ga0105245_10076064
369 Ga0105245_10135235
370 Ga0105247_10090333
371 Ga0105243_10007695
372 Ga0105241_10111382
373 Ga0105241_10841590
374 Ga0105242_10039084
375 Ga0105242_10163126
376 Ga0105248_10002725
377 Ga0105248_10005133
378 Ga0105248_10006301
379 Ga0105248_10048650
380 Ga0105248_10161441
381 Ga0105237_10020398
382 Ga0105237_10131726
383 Ga0105237_10616361
384 Ga0105238_10009348
385 Ga0105238_10011059
386 Ga0105238_10022926
387 Ga0105249_10003801
388 Ga0105249_11923927
389 Ga0105239_10060367
390 Ga0105239_10185556
391 Ga0105239_10418142
392 Ga0105239_11297537
393 Ga0157374_11154720
394 Ga0157378_10070733
395 Ga0163162_10019103
396 Ga0163162_10742455
397 Ga0163162_10809057
398 Ga0157375_10034803
399 Ga0157375_10073584
400 Ga0157375_10294499
401 Ga0163163_10299613
402 Ga0163163_10394136
403 Ga0163163_10592235
404 Ga0163163_10718740
405 Ga0157377_10088762
406 Ga0157379_10022083
407 Ga0157379_10094671
408 Ga0157379_10099949
409 Ga0157379_10926383
410 Ga0157376_10669871
411 Ga0207427_103610
412 Ga0209026_1001883
413 Ga0209233_1000006
414 Ga0209233_1004034
415 Ga0209758_1000013
416 Ga0209758_1015546
417 Ga0209050_1000038
418 Ga0209257_1000850
419 Ga0209257_1001322
420 Ga0209257_1008553
421 Ga0207692_10414995
422 Ga0207710_10043913
423 Ga0207688_10040021
424 Ga0207680_10000321
425 Ga0207680_10226051
426 Ga0207645_10026717
427 Ga0207643_10094440
428 Ga0207705_10204211
429 Ga0207654_10040004
430 Ga0207654_10138241
431 Ga0207654_10728340
432 Ga0207695_10017098
433 Ga0207695_10022091
434 Ga0207671_10121748
435 Ga0207671_10285462
436 Ga0207693_10723133
437 Ga0207657_10051697
438 Ga0207694_10115205
439 Ga0207694_10177029
440 Ga0207694_10429129
441 Ga0207650_10116618
442 Ga0207687_10492837
443 Ga0207700_10575812
444 Ga0207664_10075363
445 Ga0207644_10047208
446 Ga0207644_11003927
447 Ga0207709_10019886
448 Ga0207711_10000331
449 Ga0207711_10003760
450 Ga0207711_10013517
451 Ga0207711_10066806
452 Ga0207689_10059907
453 Ga0207679_10857150
454 Ga0207667_10280808
455 Ga0207667_10458947
456 Ga0207651_10156020
457 Ga0207668_10014860
458 Ga0207658_10076081
459 Ga0207658_10173394
460 Ga0207703_10000245
461 Ga0207703_10006327
462 Ga0207703_10029995
463 Ga0207678_10062025
464 Ga0207641_10000134
465 Ga0207641_10004948
466 Ga0207641_10041847
467 Ga0207641_10188871
468 Ga0207648_10003899
469 Ga0207676_10000712
470 Ga0207676_10008284
471 Ga0207676_10176543
472 Ga0207674_10219480
473 Ga0207675_100119041
474 Ga0207683_10044512
475 Ga0207683_10053257
476 Ga0207698_10195934
477 Ga0207698_10781545
478 Ga0209813_10161256
479 Ga0268266_10008509
480 Ga0268266_10048748
481 Ga0268266_10055838
482 Ga0268266_10059946
483 Ga0268266_10294569
484 Ga0268264_10253641
485 Ga0268264_10317051
486 Ga0307517_10146816
487 Ga0307515_10026669
488 Ga0307515_10076639
489 Ga0265338_10022583
490 Ga0265324_10016453
491 Ga0307511_10016123
492 Ga0265320_10000102
493 Ga0265325_10002993
494 Ga0265325_10014855
495 Ga0265325_10125142
496 Ga0265325_10138577
497 Ga0265340_10046581
498 Ga0265340_10136427
499 Ga0265339_10028712
500 Ga0265339_10076314
501 Ga0265339_10129349
502 Ga0265331_10008516
503 Ga0265331_10020197
504 Ga0265331_10082853
505 Ga0265327_10008903
506 Ga0307513_10000588
507 Ga0307513_10002138
508 Ga0307509_10534840
509 Ga0265313_10068538
510 Ga0307508_10284205
511 Ga0265314_10000796
512 Ga0265314_10001109
513 Ga0265314_10011547
514 Ga0265314_10027781
515 Ga0265314_10216630
516 Ga0265342_10011601
517 Ga0265342_10061409
518 Ga0307516_10000022
519 Ga0307516_10069205
520 Ga0307412_10641129
521 Ga0307414_10013160
522 Ga0307411_10160458
523 Ga0373940_0021522
524 Ga0373936_0001620
525 Ga0373943_0037912
526 Ga0373931_0122101
527 Ga0373935_0045580
528 Ga0373927_0451669
529 Ga0373947_0083940
530 Ga0373937_0096302
531 Ga0395905_0046308
532 Ga0395905_0130053
533 Ga0395905_0261993
534 Ga0395905_0446680
535 Ga0436365_1212532
536 Ga0436360_0070765
537 Ga0436360_0407363
538 Ga0436361_0339201
539 Ga0453684_0071807
540 Ga0466959_0218656
541 Ga0495592_0284557
542 Ga0495590_0001131
543 Ga0495651_0202555
544 Ga0495650_0087565
545 Ga0495594_0112414
546 Ga0495610_0000611
547 Ga0495648_0000067
548 Ga0495648_0185484
549 Ga0495663_0045725
550 Ga0495642_0003668
551 Ga0495640_0531643
552 Ga0495609_0064911
553 Ga0495668_0015497
554 Ga0495668_0078393
555 Ga0495668_0151793
556 Ga0495668_0452403
557 Ga0495611_0028094
558 Ga0495599_0263330
559 Ga0495669_0030118
560 Ga0495613_0215284
561 Ga0495581_0084233
562 Ga0495672_0044756
563 Ga0495673_0001006
564 Ga0496102_0123203
565 Ga0496104_0093743
566 Ga0496105_0053506
567 Ga0496106_0757925
568 Ga0496108_0325989
569 Ga0496108_0478496
570 Ga0496109_0027586
571 Ga0496109_0498906
572 Ga0496110_0243120
573 Ga0496111_0675289
574 Ga0496112_0088348
575 Ga0496112_0249837
576 Ga0496112_0320805
577 Ga0496113_0413106
578 Ga0496113_0527151
579 Ga0496114_0578062
580 Ga0496116_0303471
581 Ga0496117_0037597
582 Ga0496118_0003291
583 Ga0496121_0000135
584 Ga0495678_000322
585 Ga0501034_0001509
586 Ga0501034_0105142
587 Ga0501034_0225519
588 Ga0501037_0019208
589 Ga0501043_0172879
590 Ga0501047_0074923
591 Ga0501048_0203638
592 Ga0501073_0509315
593 Ga0501035_0218105
594 Ga0501044_0002769
595 Ga0501044_0359752
596 nmdc:mga03683_29235_c1
597 nmdc:mga0k408_178418_c1
598 nmdc:mga04h51_186673_c1
599 nmdc:mga07m45_142_c1
600 Ga0495619_0002385
601 Ga0500644_0000599
602 Ga0500555_005097
603 Ga0500562_031359
604 Ga0500594_0003492
605 Ga0500564_000129
606 Ga0500573_0000033
607 Ga0500588_0008124
608 Ga0500622_0000596
609 Ga0500645_021179
610 2585146553

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00196

GerE

Bacterial regulatory proteins, luxR family

175

231

0.97

PF00072

Response_reg

Response regulator receiver domain

42

151

0.93

PF08281

Sigma70_r4_2

Sigma-70, region 4

167

219

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
1d5w-assembly1.cif.gz_A phosphorylated fixj receiver domain 0.9629 1 120
4wsz-assembly1.cif.gz_B crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9527 138 200
1dck-assembly1.cif.gz_A structure of unphosphorylated fixj-n complexed with mn2+ 0.9495 1 120
6ont-assembly1.cif.gz_A-2 structure of the francisella response regulator 1452 receiver domain 0.947 4 122
7m0s-assembly1.cif.gz_B n-terminal domain of pmra from acinetobacter baumannii 0.9466 4 122
ID Description Score Start End Superfamily
1yioA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9698 141 197 1.10.10.10
1zn2A02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9654 141 197 1.10.10.10
af_Q11028_1077_1158_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9575 142 197 1.10.10.10
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9546 4 82 3.40.50.2300
af_P52106_149_214_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9498 141 197 1.10.10.10
ID Description Score Start End GO Terms
AF-U2EN86-F1-model_v4 DNA-binding response regulator LuxR family protein 0.9595 3 200 GO:0000160
GO:0003677
GO:0006355
AF-A0A6I0EFJ3-F1-model_v4 Response regulator 0.9545 1 199 GO:0000160
GO:0003677
GO:0006355
AF-A0A2S6N0G9-F1-model_v4 DNA-binding response regulator 0.9463 1 199 GO:0000160
GO:0003677
GO:0006355
AF-A0A437H1V0-F1-model_v4 Response regulator transcription factor 0.9459 1 200 GO:0000160
GO:0003677
GO:0006355
AF-A0A2N5APB4-F1-model_v4 deleted 0.945 1 200

Map