F397974

General Info

Members Datasets Scaffolds Average Seq Length
305 215 598 323

Family's Representative Sequence

Representative Sequence 3300005436|Ga0070713_100083175|Ga0070713_1000831753
Length 355
Sequence VTSAAVIAACAGHDDRGHCAEPPGATVIDRRRCVKLVAASALAPALRPSRARAQTIIYPTRYVRLVVPFAPAGGADAIGRIMAGRLSELWGQQVVVENKGGAGGNIAADMVAHSEPDGYTLFLPSLGHAINRFLFPSLSYDPIADFAPISLVCTYPNIMVVPMSSPARTVQEFIAHAKANRGRITFASSSSGTSVHLAGEMFKRMAHIEMTHVAYRGAGPAYNDVIPGRIDVMFATASSALPQIEGGKLRGLGVTALARQPWAPDMPTISESGLPGFDVSSWYGLFAPARTPPEIIGKISADAATVVREASFVDRLNRIATTAVGSTPDELARHLKSEMDKWGPVITEARIRVDE

Samples

Sample ID Description Type Environment
1 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
2 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
3 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
24 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
31 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
60 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
102 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
103 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
104 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
105 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
106 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
107 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
108 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
109 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
110 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
113 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
114 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
115 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
116 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
117 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
118 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
119 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
120 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
121 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
122 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
123 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
124 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
125 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
126 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
127 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
128 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
129 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
130 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
131 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
132 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
133 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
134 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
135 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
136 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
137 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
138 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
139 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
140 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
141 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
142 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
143 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
144 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
145 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
146 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
147 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
148 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
149 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
150 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
151 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
152 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
153 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
154 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
155 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
156 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
157 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
158 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
159 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
160 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
161 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
162 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
163 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
164 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
165 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
166 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
167 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
168 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
169 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
170 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
171 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
172 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
173 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
174 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
175 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
176 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
177 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
178 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
179 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
180 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
181 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
182 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
183 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
184 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
185 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
186 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
187 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
188 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
189 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
190 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
191 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
192 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
193 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
194 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
195 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
196 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
197 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
198 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
199 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
200 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
201 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
202 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
203 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
204 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
205 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
206 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
207 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
208 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
209 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
210 2643221672 Variovorax sp. Root434 Isolate Unclassified
211 2738543012 Acidovorax sp. CF301 Isolate Unclassified
212 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
213 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
214 2904456579 Variovorax sp. 2002 Isolate Unclassified
215 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.38
Metatranscriptomes 0
Isolates 2.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.54
Nodule 0
Rhizoplane 2.62
Rhizosphere 84.59
Stem 0
Stem Tuber 0
Unclassified 2.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070713_100083175 3300005436 Bacteria 2736
2 Ga0055536_1000425 3300003781 Bacteria 30112
3 Ga0055540_1000092 3300003792 Bacteria 98476
4 Ga0055531_10000084 3300003794 Bacteria 102550
5 Ga0070690_100219866 3300005330 Bacteria 1330
6 Ga0070670_100141268 3300005331 Bacteria 2082
7 Ga0070680_100116398 3300005336 Bacteria 2228
8 Ga0068868_100412660 3300005338 Bacteria 1167
9 Ga0070660_100057008 3300005339 Bacteria 3025
10 Ga0070675_100099485 3300005354 Bacteria 2448
11 Ga0070674_100029184 3300005356 Bacteria 3630
12 Ga0070709_10085567 3300005434 Bacteria 2068
13 Ga0070713_100038711 3300005436 Bacteria 3866
14 Ga0070713_100419124 3300005436 Bacteria 1253
15 Ga0070700_100079259 3300005441 Bacteria 2117
16 Ga0070694_100024433 3300005444 Bacteria 3900
17 Ga0070681_10005132 3300005458 Bacteria 12632
18 Ga0070681_10046880 3300005458 Bacteria 4320
19 Ga0070681_10200138 3300005458 Unclassified 1916
20 Ga0070707_100326594 3300005468 Bacteria 1491
21 Ga0070679_100029353 3300005530 Bacteria 5427
22 Ga0070679_100081471 3300005530 Bacteria 3226
23 Ga0070672_100180379 3300005543 Bacteria 1759
24 Ga0070696_100072280 3300005546 Bacteria 2429
25 Ga0070665_100501625 3300005548 Bacteria 1225
26 Ga0070702_100233787 3300005615 Bacteria 1237
27 Ga0068864_100019131 3300005618 Bacteria 5725
28 Ga0068866_10078279 3300005718 Bacteria 1768
29 Ga0068870_10081454 3300005840 Bacteria 1790
30 Ga0068870_10106703 3300005840 Bacteria 1592
31 Ga0068863_100032083 3300005841 Bacteria 5009
32 Ga0068858_100104898 3300005842 Bacteria 2637
33 Ga0081455_10022069 3300005937 Bacteria 5958
34 Ga0070717_10056238 3300006028 Bacteria 3250
35 Ga0070717_10223987 3300006028 Bacteria 1654
36 Ga0070717_10343154 3300006028 Bacteria 1334
37 Ga0075365_10005351 3300006038 Bacteria 6915
38 Ga0075365_10030239 3300006038 Unclassified 3467
39 Ga0075368_10052542 3300006042 Bacteria 1621
40 Ga0075363_100084665 3300006048 Bacteria 1739
41 Ga0075364_10001015 3300006051 Bacteria 14889
42 Ga0075369_10086634 3300006186 Unclassified 1394
43 Ga0075366_10007142 3300006195 Bacteria 6151
44 Ga0097621_100063823 3300006237 Bacteria 3027
45 Ga0068871_100048838 3300006358 Bacteria 3417
46 Ga0075428_100000462 3300006844 Bacteria 40839
47 Ga0075428_100236914 3300006844 Bacteria 1969
48 Ga0075430_100083474 3300006846 Bacteria 2676
49 Ga0075434_100013416 3300006871 Bacteria 7797
50 Ga0075434_100252753 3300006871 Bacteria 1782
51 Ga0075429_100005156 3300006880 Bacteria 11238
52 Ga0068865_100137775 3300006881 Bacteria 1836
53 Ga0068865_100292584 3300006881 Bacteria 1300
54 Ga0075435_100329007 3300007076 Bacteria 1308
55 Ga0075435_100380266 3300007076 Bacteria 1213
56 Ga0099795_10012722 3300007788 Bacteria 2560
57 Ga0099795_10019634 3300007788 Bacteria 2190
58 Ga0111539_10001173 3300009094 Bacteria 34746
59 Ga0111539_10060002 3300009094 Bacteria 4509
60 Ga0111539_10098641 3300009094 Bacteria 3431
61 Ga0111539_10243935 3300009094 Bacteria 2092
62 Ga0105245_10388539 3300009098 Bacteria 1391
63 Ga0105247_10111460 3300009101 Bacteria 1762
64 Ga0114129_10071399 3300009147 Bacteria 4841
65 Ga0114129_10398738 3300009147 Bacteria 1813
66 Ga0105242_10313383 3300009176 Bacteria 1436
67 Ga0105248_10030600 3300009177 Bacteria 6012
68 Ga0105249_10203823 3300009553 Bacteria 1937
69 Ga0099796_10005945 3300010159 Bacteria 3087
70 Ga0105239_10512344 3300010375 Bacteria 1364
71 Ga0105246_10015234 3300011119 Bacteria 4851
72 Ga0157374_10325867 3300013296 Bacteria 1523
73 Ga0157375_10263890 3300013308 Bacteria 1884
74 Ga0157375_10301578 3300013308 Bacteria 1766
75 Ga0163163_10492296 3300014325 Bacteria 1288
76 Ga0163163_10574846 3300014325 Bacteria 1190
77 Ga0157377_10133247 3300014745 Bacteria 1520
78 Ga0163161_10119506 3300017792 Bacteria 1979
79 Ga0213876_10028633 3300021384 Bacteria 2937
80 Ga0209676_1000123 3300025292 Bacteria 195351
81 Ga0209050_1000188 3300025298 Bacteria 138865
82 Ga0209051_1000091 3300025303 Bacteria 173683
83 Ga0209257_1000057 3300025304 Bacteria 396985
84 Ga0207697_10020632 3300025315 Bacteria 2697
85 Ga0207688_10003816 3300025901 Bacteria 8219
86 Ga0207680_10159644 3300025903 Bacteria 1510
87 Ga0207699_10046891 3300025906 Bacteria 2531
88 Ga0207645_10023334 3300025907 Bacteria 4021
89 Ga0207643_10010066 3300025908 Bacteria 5085
90 Ga0207707_10022897 3300025912 Bacteria 5464
91 Ga0207660_10099593 3300025917 Bacteria 2169
92 Ga0207657_10019458 3300025919 Bacteria 6446
93 Ga0207652_10079239 3300025921 Bacteria 2869
94 Ga0207681_10174400 3300025923 Bacteria 1632
95 Ga0207650_10084260 3300025925 Bacteria 2416
96 Ga0207659_10017005 3300025926 Bacteria 4745
97 Ga0207659_10117597 3300025926 Bacteria 2032
98 Ga0207700_10061797 3300025928 Bacteria 2842
99 Ga0207700_10347748 3300025928 Bacteria 1290
100 Ga0207664_10538073 3300025929 Bacteria 1047
101 Ga0207644_10251398 3300025931 Bacteria 1410
102 Ga0207706_10070456 3300025933 Bacteria 3075
103 Ga0207665_10027614 3300025939 Bacteria 3749
104 Ga0207691_10222703 3300025940 Bacteria 1635
105 Ga0207651_10103007 3300025960 Bacteria 2123
106 Ga0207712_10038335 3300025961 Bacteria 3277
107 Ga0207712_10122288 3300025961 Bacteria 1971
108 Ga0207703_10236726 3300026035 Bacteria 1639
109 Ga0207639_10070908 3300026041 Bacteria 2724
110 Ga0207678_10113773 3300026067 Bacteria 2309
111 Ga0207708_10050177 3300026075 Bacteria 3177
112 Ga0207641_10047990 3300026088 Bacteria 3603
113 Ga0207648_10055620 3300026089 Bacteria 3454
114 Ga0207676_10004001 3300026095 Bacteria 10403
115 Ga0207675_100153275 3300026118 Bacteria 2195
116 Ga0209969_1000146 3300027360 Bacteria 9219
117 Ga0210000_1000520 3300027462 Bacteria 5250
118 Ga0209999_1004991 3300027543 Bacteria 2387
119 Ga0209983_1001774 3300027665 Bacteria 4787
120 Ga0209971_1008039 3300027682 Bacteria 2504
121 Ga0209974_10000772 3300027876 Bacteria 10890
122 Ga0209974_10033933 3300027876 Bacteria 1694
123 Ga0207428_10009476 3300027907 Bacteria 8719
124 Ga0268265_10584758 3300028380 Bacteria 1065
125 Ga0265318_10003817 3300028577 Bacteria 7465
126 Ga0265332_10004029 3300031238 Bacteria 6989
127 Ga0265328_10002074 3300031239 Bacteria 9051
128 Ga0265320_10072874 3300031240 Bacteria 1615
129 Ga0265327_10026552 3300031251 Bacteria 3351
130 Ga0265316_10009927 3300031344 Bacteria 8718
131 Ga0307513_10034066 3300031456 Bacteria 5719
132 Ga0265314_10000660 3300031711 Bacteria 42242
133 Ga0265342_10033350 3300031712 Bacteria 3166
134 Ga0307405_10047078 3300031731 Bacteria 2654
135 Ga0307416_100024229 3300032002 Bacteria 4424
136 Ga0307416_100490967 3300032002 Unclassified 1290
137 Ga0373958_0022300 3300034819 Bacteria 1182
138 Ga0373934_0057082 3300035086 Bacteria 1553
139 Ga0373944_0054603 3300035089 Bacteria 1267
140 Ga0373923_0001022 3300035111 Bacteria 7603
141 Ga0373936_0003397 3300035113 Bacteria 5968
142 Ga0373936_0044777 3300035113 Bacteria 1781
143 Ga0373945_0005945 3300035116 Bacteria 3919
144 Ga0373954_0005204 3300035118 Bacteria 5621
145 Ga0373954_0067030 3300035118 Bacteria 1700
146 Ga0373960_0042296 3300035121 Bacteria 1322
147 Ga0373943_0002682 3300035170 Bacteria 8090
148 Ga0373946_0002595 3300035171 Bacteria 6388
149 Ga0373955_0001254 3300035172 Bacteria 10791
150 Ga0373955_0004696 3300035172 Bacteria 6069
151 Ga0373924_0001548 3300035410 Bacteria 7503
152 Ga0373935_0000017 3300035692 Bacteria 70368
153 Ga0373935_0000328 3300035692 Bacteria 23872
154 Ga0373927_0004905 3300035695 Bacteria 9291
155 Ga0373933_0007111 3300035724 Bacteria 6095
156 Ga0373933_0026695 3300035724 Bacteria 3318
157 Ga0373933_0160136 3300035724 Bacteria 1429
158 Ga0373947_0000916 3300035725 Bacteria 17899
159 Ga0373947_0009098 3300035725 Bacteria 5708
160 Ga0373937_0000103 3300036401 Bacteria 80386
161 Ga0373937_0000365 3300036401 Bacteria 42154
162 Ga0373937_0265928 3300036401 Bacteria 1618
163 Ga0373925_0000038 3300037068 Bacteria 142088
164 Ga0373925_0000058 3300037068 Bacteria 122682
165 Ga0373925_0062365 3300037068 Bacteria 2803
166 Ga0395898_0025342 3300037466 Bacteria 5977
167 Ga0395898_0068427 3300037466 Bacteria 3436
168 Ga0395905_0111597 3300037471 Bacteria 2567
169 Ga0436365_0242028 3300039437 Bacteria 4410
170 Ga0439466_0044429 3300041411 Unclassified 1472
171 Ga0439445_0094201 3300042004 Bacteria 845
172 Ga0450911_000058 3300042115 Bacteria 45420
173 Ga0450918_001630 3300042531 Bacteria 4401
174 Ga0466963_0114858 3300044694 Bacteria 1850
175 Ga0466958_0091924 3300045836 Bacteria 1878
176 Ga0466967_0073820 3300045976 Bacteria 3061
177 Ga0466967_0144424 3300045976 Bacteria 2219
178 Ga0495592_0000062 3300046454 Bacteria 99207
179 Ga0495592_0000343 3300046454 Bacteria 38047
180 Ga0495629_0007057 3300046459 Bacteria 8278
181 Ga0495638_0049764 3300046460 Bacteria 2619
182 Ga0495651_0000935 3300046462 Bacteria 22624
183 Ga0495651_0002876 3300046462 Bacteria 13334
184 Ga0495653_0000072 3300046463 Bacteria 85266
185 Ga0495653_0000075 3300046463 Bacteria 82856
186 Ga0495580_0242357 3300046472 Bacteria 1236
187 Ga0495582_0106353 3300046473 Bacteria 1574
188 Ga0495662_0009191 3300046476 Bacteria 4849
189 Ga0495662_0030944 3300046476 Bacteria 2584
190 Ga0495664_0000009 3300046477 Bacteria 289534
191 Ga0495584_0014455 3300046491 Bacteria 4021
192 Ga0495608_0000061 3300046511 Bacteria 86891
193 Ga0495608_0000608 3300046511 Bacteria 24628
194 Ga0495618_0000016 3300046514 Bacteria 151770
195 Ga0495618_0000061 3300046514 Bacteria 78337
196 Ga0495628_0000012 3300046516 Bacteria 224162
197 Ga0495630_0000945 3300046517 Bacteria 20329
198 Ga0495630_0002768 3300046517 Bacteria 12173
199 Ga0495666_0059020 3300046526 Bacteria 1835
200 Ga0495652_0000021 3300046529 Bacteria 181454
201 Ga0495652_0070078 3300046529 Bacteria 2933
202 Ga0495665_0171302 3300046531 Bacteria 1130
203 Ga0495640_0000031 3300046533 Bacteria 77381
204 Ga0495640_0013959 3300046533 Bacteria 6093
205 Ga0495587_0000033 3300046536 Bacteria 123885
206 Ga0495587_0000052 3300046536 Bacteria 100154
207 Ga0495598_0017566 3300046537 Bacteria 1847
208 Ga0495598_0021321 3300046537 Bacteria 1722
209 Ga0495597_0000024 3300046542 Bacteria 143948
210 Ga0495645_0000017 3300046543 Bacteria 156865
211 Ga0495645_0000254 3300046543 Bacteria 39053
212 Ga0495667_0000011 3300046559 Bacteria 222545
213 Ga0495667_0000515 3300046559 Bacteria 24734
214 Ga0495634_0000080 3300046642 Bacteria 76133
215 Ga0495634_0001144 3300046642 Bacteria 24509
216 Ga0495635_0000018 3300046663 Bacteria 193591
217 Ga0495635_0000019 3300046663 Bacteria 193402
218 Ga0495657_0000308 3300046675 Bacteria 44743
219 Ga0495657_0000982 3300046675 Bacteria 25117
220 Ga0495599_0000024 3300046678 Bacteria 121388
221 Ga0495599_0000128 3300046678 Bacteria 48691
222 Ga0495623_0000022 3300046679 Bacteria 98899
223 Ga0495623_0001080 3300046679 Bacteria 18452
224 Ga0495646_0000033 3300046680 Bacteria 83930
225 Ga0495646_0000038 3300046680 Bacteria 75050
226 Ga0495658_0034961 3300046683 Bacteria 2761
227 Ga0495658_0059805 3300046683 Bacteria 2183
228 Ga0495613_0012130 3300046689 Bacteria 6405
229 Ga0495613_0056943 3300046689 Bacteria 2870
230 Ga0495600_0000028 3300046809 Bacteria 90661
231 Ga0495600_0000822 3300046809 Bacteria 16495
232 Ga0495604_0000011 3300047317 Bacteria 292024
233 Ga0495674_0000015 3300047319 Bacteria 224071
234 Ga0495680_0001545 3300047322 Bacteria 24639
235 Ga0495680_0002374 3300047322 Bacteria 19293
236 Ga0495680_0310719 3300047322 Bacteria 1105
237 Ga0495675_0000424 3300047444 Bacteria 28500
238 Ga0495675_0001637 3300047444 Bacteria 13445
239 Ga0495684_0000012 3300047471 Bacteria 187118
240 Ga0495684_0000036 3300047471 Bacteria 107181
241 Ga0495593_0000789 3300047673 Bacteria 18348
242 Ga0495602_0000018 3300048088 Bacteria 183837
243 Ga0495602_0274481 3300048088 Bacteria 1245
244 Ga0496100_0258773 3300048903 Unclassified 1290
245 Ga0496101_0282997 3300048904 Bacteria 1296
246 Ga0496102_0039236 3300048905 Bacteria 4278
247 Ga0496102_0476506 3300048905 Bacteria 1169
248 Ga0496104_0061068 3300048907 Bacteria 3572
249 Ga0496104_0070240 3300048907 Bacteria 3329
250 Ga0496106_0346524 3300048909 Bacteria 1193
251 Ga0496112_0434988 3300048915 Unclassified 1250
252 Ga0496124_0038066 3300048927 Bacteria 4178
253 Ga0496125_0000964 3300048928 Bacteria 45175
254 Ga0496125_0011119 3300048928 Bacteria 9027
255 Ga0496125_0059655 3300048928 Bacteria 3072
256 Ga0496125_0071820 3300048928 Bacteria 2701
257 Ga0496126_0004004 3300048929 Bacteria 17967
258 Ga0501047_0264322 3300049581 Bacteria 1568
259 Ga0501080_0218130 3300049742 Bacteria 1746
260 Ga0501044_0001312 3300049823 Bacteria 29308
261 nmdc:mga03n38_55862_c1 3300050490 Bacteria 1780
262 nmdc:mga00v17_3916_c1 3300050491 Bacteria 7680
263 nmdc:mga0k408_7666_c1 3300050493 Bacteria 5766
264 nmdc:mga07m45_53225_c1 3300050496 Bacteria 2286
265 nmdc:mga05p37_27912_c1 3300050507 Bacteria 6875
266 nmdc:mga05p37_531801_c1 3300050507 Bacteria 1342
267 nmdc:mga09592_6812_c1 3300050508 Bacteria 9298
268 nmdc:mga06r32_240823_c1 3300050510 Bacteria 1797
269 nmdc:mga08y16_184185_c1 3300050511 Bacteria 2167
270 nmdc:mga08y16_2086_c1 3300050511 Bacteria 20507
271 nmdc:mga08y16_303956_c1 3300050511 Bacteria 1644
272 nmdc:mga08y16_544923_c1 3300050511 Bacteria 1175
273 nmdc:mga0n895_109662_c1 3300050512 Bacteria 2775
274 nmdc:mga0n895_14101_c1 3300050512 Bacteria 7245
275 nmdc:mga0n895_352774_c1 3300050512 Bacteria 1490
276 nmdc:mga0sz30_18879_c2 3300050516 Unclassified 1394
277 Ga0495601_0000015 3300053077 Bacteria 213851
278 Ga0495601_0000024 3300053077 Bacteria 133160
279 Ga0495601_0060169 3300053077 Bacteria 2410
280 Ga0495612_0000016 3300053078 Bacteria 158947
281 Ga0495612_0000606 3300053078 Bacteria 14418
282 Ga0495595_0000036 3300053084 Bacteria 79035
283 Ga0495595_0000037 3300053084 Bacteria 78496
284 Ga0495595_0024471 3300053084 Bacteria 2667
285 Ga0495619_0000034 3300053085 Bacteria 129851
286 Ga0495619_0000066 3300053085 Bacteria 83667
287 Ga0495619_0077186 3300053085 Bacteria 2237
288 Ga0500562_018627 3300053108 Bacteria 1793
289 Ga0500568_0026675 3300053139 Bacteria 2423
290 Ga0500616_0062003 3300053153 Bacteria 1933
291 Ga0500619_000046 3300053154 Bacteria 37955
292 2644159077 2643221628 Bacteria 5745828
293 2644397304 2643221672 Bacteria 6322190
294 2739246558 2738543012 Bacteria 7115078
295 2842722408 2842718218 Bacteria 4560148
296 2895518321 2895511927 Bacteria 6802080
297 2904461575 2904456579 Bacteria 6819253
298 2904461598 2904456579 Bacteria 6819253
299 2974321018 2974320154 Bacteria 4571377
300 Ga0070713_100083175
301 Ga0055536_1000425
302 Ga0055540_1000092
303 Ga0055531_10000084
304 Ga0070690_100219866
305 Ga0070670_100141268
306 Ga0070680_100116398
307 Ga0068868_100412660
308 Ga0070660_100057008
309 Ga0070675_100099485
310 Ga0070674_100029184
311 Ga0070709_10085567
312 Ga0070713_100038711
313 Ga0070713_100419124
314 Ga0070700_100079259
315 Ga0070694_100024433
316 Ga0070681_10005132
317 Ga0070681_10046880
318 Ga0070681_10200138
319 Ga0070707_100326594
320 Ga0070679_100029353
321 Ga0070679_100081471
322 Ga0070672_100180379
323 Ga0070696_100072280
324 Ga0070665_100501625
325 Ga0070702_100233787
326 Ga0068864_100019131
327 Ga0068866_10078279
328 Ga0068870_10081454
329 Ga0068870_10106703
330 Ga0068863_100032083
331 Ga0068858_100104898
332 Ga0081455_10022069
333 Ga0070717_10056238
334 Ga0070717_10223987
335 Ga0070717_10343154
336 Ga0075365_10005351
337 Ga0075365_10030239
338 Ga0075368_10052542
339 Ga0075363_100084665
340 Ga0075364_10001015
341 Ga0075369_10086634
342 Ga0075366_10007142
343 Ga0097621_100063823
344 Ga0068871_100048838
345 Ga0075428_100000462
346 Ga0075428_100236914
347 Ga0075430_100083474
348 Ga0075434_100013416
349 Ga0075434_100252753
350 Ga0075429_100005156
351 Ga0068865_100137775
352 Ga0068865_100292584
353 Ga0075435_100329007
354 Ga0075435_100380266
355 Ga0099795_10012722
356 Ga0099795_10019634
357 Ga0111539_10001173
358 Ga0111539_10060002
359 Ga0111539_10098641
360 Ga0111539_10243935
361 Ga0105245_10388539
362 Ga0105247_10111460
363 Ga0114129_10071399
364 Ga0114129_10398738
365 Ga0105242_10313383
366 Ga0105248_10030600
367 Ga0105249_10203823
368 Ga0099796_10005945
369 Ga0105239_10512344
370 Ga0105246_10015234
371 Ga0157374_10325867
372 Ga0157375_10263890
373 Ga0157375_10301578
374 Ga0163163_10492296
375 Ga0163163_10574846
376 Ga0157377_10133247
377 Ga0163161_10119506
378 Ga0213876_10028633
379 Ga0209676_1000123
380 Ga0209050_1000188
381 Ga0209051_1000091
382 Ga0209257_1000057
383 Ga0207697_10020632
384 Ga0207688_10003816
385 Ga0207680_10159644
386 Ga0207699_10046891
387 Ga0207645_10023334
388 Ga0207643_10010066
389 Ga0207707_10022897
390 Ga0207660_10099593
391 Ga0207657_10019458
392 Ga0207652_10079239
393 Ga0207681_10174400
394 Ga0207650_10084260
395 Ga0207659_10017005
396 Ga0207659_10117597
397 Ga0207700_10061797
398 Ga0207700_10347748
399 Ga0207664_10538073
400 Ga0207644_10251398
401 Ga0207706_10070456
402 Ga0207665_10027614
403 Ga0207691_10222703
404 Ga0207651_10103007
405 Ga0207712_10038335
406 Ga0207712_10122288
407 Ga0207703_10236726
408 Ga0207639_10070908
409 Ga0207678_10113773
410 Ga0207708_10050177
411 Ga0207641_10047990
412 Ga0207648_10055620
413 Ga0207676_10004001
414 Ga0207675_100153275
415 Ga0209969_1000146
416 Ga0210000_1000520
417 Ga0209999_1004991
418 Ga0209983_1001774
419 Ga0209971_1008039
420 Ga0209974_10000772
421 Ga0209974_10033933
422 Ga0207428_10009476
423 Ga0268265_10584758
424 Ga0265318_10003817
425 Ga0265332_10004029
426 Ga0265328_10002074
427 Ga0265320_10072874
428 Ga0265327_10026552
429 Ga0265316_10009927
430 Ga0307513_10034066
431 Ga0265314_10000660
432 Ga0265342_10033350
433 Ga0307405_10047078
434 Ga0307416_100024229
435 Ga0307416_100490967
436 Ga0373958_0022300
437 Ga0373934_0057082
438 Ga0373944_0054603
439 Ga0373923_0001022
440 Ga0373936_0003397
441 Ga0373936_0044777
442 Ga0373945_0005945
443 Ga0373954_0005204
444 Ga0373954_0067030
445 Ga0373960_0042296
446 Ga0373943_0002682
447 Ga0373946_0002595
448 Ga0373955_0001254
449 Ga0373955_0004696
450 Ga0373924_0001548
451 Ga0373935_0000017
452 Ga0373935_0000328
453 Ga0373927_0004905
454 Ga0373933_0007111
455 Ga0373933_0026695
456 Ga0373933_0160136
457 Ga0373947_0000916
458 Ga0373947_0009098
459 Ga0373937_0000103
460 Ga0373937_0000365
461 Ga0373937_0265928
462 Ga0373925_0000038
463 Ga0373925_0000058
464 Ga0373925_0062365
465 Ga0395898_0025342
466 Ga0395898_0068427
467 Ga0395905_0111597
468 Ga0436365_0242028
469 Ga0439466_0044429
470 Ga0439445_0094201
471 Ga0450911_000058
472 Ga0450918_001630
473 Ga0466963_0114858
474 Ga0466958_0091924
475 Ga0466967_0073820
476 Ga0466967_0144424
477 Ga0495592_0000062
478 Ga0495592_0000343
479 Ga0495629_0007057
480 Ga0495638_0049764
481 Ga0495651_0000935
482 Ga0495651_0002876
483 Ga0495653_0000072
484 Ga0495653_0000075
485 Ga0495580_0242357
486 Ga0495582_0106353
487 Ga0495662_0009191
488 Ga0495662_0030944
489 Ga0495664_0000009
490 Ga0495584_0014455
491 Ga0495608_0000061
492 Ga0495608_0000608
493 Ga0495618_0000016
494 Ga0495618_0000061
495 Ga0495628_0000012
496 Ga0495630_0000945
497 Ga0495630_0002768
498 Ga0495666_0059020
499 Ga0495652_0000021
500 Ga0495652_0070078
501 Ga0495665_0171302
502 Ga0495640_0000031
503 Ga0495640_0013959
504 Ga0495587_0000033
505 Ga0495587_0000052
506 Ga0495598_0017566
507 Ga0495598_0021321
508 Ga0495597_0000024
509 Ga0495645_0000017
510 Ga0495645_0000254
511 Ga0495667_0000011
512 Ga0495667_0000515
513 Ga0495634_0000080
514 Ga0495634_0001144
515 Ga0495635_0000018
516 Ga0495635_0000019
517 Ga0495657_0000308
518 Ga0495657_0000982
519 Ga0495599_0000024
520 Ga0495599_0000128
521 Ga0495623_0000022
522 Ga0495623_0001080
523 Ga0495646_0000033
524 Ga0495646_0000038
525 Ga0495658_0034961
526 Ga0495658_0059805
527 Ga0495613_0012130
528 Ga0495613_0056943
529 Ga0495600_0000028
530 Ga0495600_0000822
531 Ga0495604_0000011
532 Ga0495674_0000015
533 Ga0495680_0001545
534 Ga0495680_0002374
535 Ga0495680_0310719
536 Ga0495675_0000424
537 Ga0495675_0001637
538 Ga0495684_0000012
539 Ga0495684_0000036
540 Ga0495593_0000789
541 Ga0495602_0000018
542 Ga0495602_0274481
543 Ga0496100_0258773
544 Ga0496101_0282997
545 Ga0496102_0039236
546 Ga0496102_0476506
547 Ga0496104_0061068
548 Ga0496104_0070240
549 Ga0496106_0346524
550 Ga0496112_0434988
551 Ga0496124_0038066
552 Ga0496125_0000964
553 Ga0496125_0011119
554 Ga0496125_0059655
555 Ga0496125_0071820
556 Ga0496126_0004004
557 Ga0501047_0264322
558 Ga0501080_0218130
559 Ga0501044_0001312
560 nmdc:mga03n38_55862_c1
561 nmdc:mga00v17_3916_c1
562 nmdc:mga0k408_7666_c1
563 nmdc:mga07m45_53225_c1
564 nmdc:mga05p37_27912_c1
565 nmdc:mga05p37_531801_c1
566 nmdc:mga09592_6812_c1
567 nmdc:mga06r32_240823_c1
568 nmdc:mga08y16_184185_c1
569 nmdc:mga08y16_2086_c1
570 nmdc:mga08y16_303956_c1
571 nmdc:mga08y16_544923_c1
572 nmdc:mga0n895_109662_c1
573 nmdc:mga0n895_14101_c1
574 nmdc:mga0n895_352774_c1
575 nmdc:mga0sz30_18879_c2
576 Ga0495601_0000015
577 Ga0495601_0000024
578 Ga0495601_0060169
579 Ga0495612_0000016
580 Ga0495612_0000606
581 Ga0495595_0000036
582 Ga0495595_0000037
583 Ga0495595_0024471
584 Ga0495619_0000034
585 Ga0495619_0000066
586 Ga0495619_0077186
587 Ga0500562_018627
588 Ga0500568_0026675
589 Ga0500616_0062003
590 Ga0500619_000046
591 2644159077
592 2644397304
593 2739246558
594 2842722408
595 2895518321
596 2904461575
597 2904461598
598 2974321018

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

78

351

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qpq-assembly3.cif.gz_C structure of bug27 from bordetella pertussis 0.9373 27 322
2qpq-assembly3.cif.gz_C structure of bug27 from bordetella pertussis 0.9343 27 322
2qpq-assembly2.cif.gz_B structure of bug27 from bordetella pertussis 0.9263 26 322
2qpq-assembly2.cif.gz_B structure of bug27 from bordetella pertussis 0.9233 26 322
8hkb-assembly1.cif.gz_A tpa bound-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis mutant k184d 0.9188 29 322
ID Description Score Start End Superfamily
4x9tA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9118 26 316 3.40.190.150
2qpqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9106 26 322 3.40.190.150
2qpqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9054 26 322 3.40.190.150
2f5xC01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9009 26 320 3.40.190.150
6hkeC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8968 124 247 3.40.190.10
ID Description Score Start End GO Terms
AF-B3EWP1-F1-model_v4 UPF0065 protein in clcB-clcD intergenic region 0.9635 46 319
AF-A0A375FBS5-F1-model_v4 deleted 0.9623 34 323
AF-A0A536XT46-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9615 55 322
AF-A0A6S7A956-F1-model_v4 Tripartite tricarboxylate transporter family receptor 0.9583 65 323
AF-A0A6N7D486-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9577 23 322

Map