F398129

General Info

Members Datasets Scaffolds Average Seq Length
305 188 611 381

Family's Representative Sequence

Representative Sequence 3300017792|Ga0163161_10018725|Ga0163161_100187253
Length 421
Sequence MKDKDKRAGFALTLILDSDLLDLIKKHNQTTMANSLNRRTWIKSSAFMAGGLALFSGTISKLAAMPVVRSFKPSPRSLNDQEVIANAGFELKARLLANENPFGPSAKAKKAIQDAIEKSYQYPFFDLPLLYNKIAEYEGIKPANILMDAGSTPLLLAAAMYYTKGGKTVITGDPSYDDLPGRAEALDGKWVKVPLTADYKLDLDAMEAKVDDNTGLVYICNPNNPTATIVDTAKLKAFCERVSKKTTVFVDEAYIDYLPDPQASTMISAVKAGNNVIVARTFSKLYGFAGMRLGYIISQPDTIATFKKYTTQSWSISAPTLAAAIAAYRETDFLNDTLKKTNESKEYLYSVLKKEGYEYIPSSANFVMFPLKMDGQKFVGEMMKRGVGIRNWKFNGKDWCRVSIGRMDEMEAFAEAFKQIS

Samples

Sample ID Description Type Environment
1 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
7 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
8 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
9 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
14 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
15 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
16 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
19 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
20 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
21 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
22 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
23 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
24 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
25 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
26 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
27 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
28 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
29 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
30 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
31 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
32 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
33 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
34 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
35 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
36 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
37 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
74 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
75 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
76 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
77 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
78 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
79 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
80 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
81 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
84 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
86 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
121 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
122 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
123 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
124 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
125 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
126 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
127 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
128 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
129 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
130 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
131 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
132 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
133 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
134 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
135 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
136 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
137 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
138 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
139 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
140 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
141 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
142 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
143 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
144 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
145 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
146 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
147 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
148 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
149 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
150 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
151 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
152 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
153 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
154 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
155 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
156 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
157 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
158 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
167 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
170 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
171 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
172 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
173 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
174 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
175 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
176 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
177 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
178 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
179 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
180 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
181 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
182 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
183 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
184 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
185 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
186 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
187 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
188 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.39
Metatranscriptomes 0
Isolates 3.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.79
Nodule 0
Rhizoplane 0.33
Rhizosphere 76.07
Stem 0
Stem Tuber 0
Unclassified 6.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0163161_10018725 3300017792 Bacteria 4854
2 JGI24740J21852_10002110 3300001979 Bacteria 9097
3 JGI24739J22299_10000195 3300001989 Bacteria 20024
4 JGI24739J22299_10026335 3300001989 Bacteria 2041
5 JGI24737J22298_10036206 3300001990 Bacteria 1525
6 JGI24735J21928_10000002 3300002067 Bacteria 624895
7 JGI25162J39368_1000293 3300002737 Bacteria 46185
8 JGI25154J39366_1000003 3300002738 Bacteria 397627
9 JGI25165J46597_1000545 3300003214 Bacteria 34627
10 JGI25153J46596_10003310 3300003215 Bacteria 9056
11 JGI25153J46596_10015807 3300003215 Bacteria 3054
12 JGI25153J46596_10029272 3300003215 Unclassified 1894
13 rootH2_10013300 3300003320 Bacteria 29603
14 rootH2_10126189 3300003320 Bacteria 19360
15 rootH2_10251989 3300003320 Bacteria 2752
16 rootL2_10069106 3300003322 Bacteria 3324
17 rootL2_10163161 3300003322 Bacteria 3668
18 rootH1_10000566 3300003316 Bacteria 33162
19 rootH1_10000566 3300003323 Bacteria 205679
20 rootH1_10026142 3300003323 Bacteria 62137
21 rootH1_10159204 3300003323 Bacteria 2359
22 rootH1_10210290 3300003323 Bacteria 2486
23 JGI25160J50197_1009458 3300003354 Bacteria 3613
24 Ga0055526_1004862 3300003771 Bacteria 7919
25 Ga0055528_1000108 3300003790 Bacteria 66828
26 Ga0055528_1000235 3300003790 Bacteria 46469
27 Ga0055530_10001980 3300003791 Bacteria 13923
28 Ga0065165_1000019 3300005262 Bacteria 271815
29 Ga0065165_1017748 3300005262 Unclassified 2608
30 Ga0065714_10008362 3300005288 Bacteria 4391
31 Ga0070683_100004261 3300005329 Bacteria 11738
32 Ga0070690_100046871 3300005330 Bacteria 2749
33 Ga0070670_100091156 3300005331 Bacteria 2620
34 Ga0070670_100278628 3300005331 Bacteria 1460
35 Ga0068869_100023881 3300005334 Bacteria 4231
36 Ga0068869_100026517 3300005334 Bacteria 4034
37 Ga0068869_100118034 3300005334 Unclassified 2026
38 Ga0070666_10023721 3300005335 Unclassified 3995
39 Ga0068868_100243974 3300005338 Bacteria 1510
40 Ga0070660_100064573 3300005339 Bacteria 2848
41 Ga0070689_100045320 3300005340 Bacteria 3386
42 Ga0070689_100268396 3300005340 Bacteria 1412
43 Ga0070661_100037541 3300005344 Bacteria 3524
44 Ga0070661_100278637 3300005344 Bacteria 1297
45 Ga0070675_100013634 3300005354 Bacteria 6393
46 Ga0070673_100043720 3300005364 Bacteria 3464
47 Ga0070688_100002011 3300005365 Bacteria 10258
48 Ga0070659_100000221 3300005366 Bacteria 44165
49 Ga0070667_100326435 3300005367 Bacteria 1385
50 Ga0070713_100183753 3300005436 Bacteria 1880
51 Ga0070662_100013158 3300005457 Bacteria 5499
52 Ga0070662_100046227 3300005457 Unclassified 3128
53 Ga0070681_10066740 3300005458 Unclassified 3567
54 Ga0068867_100171307 3300005459 Bacteria 1719
55 Ga0068867_100186017 3300005459 Bacteria 1654
56 Ga0070684_100000788 3300005535 Bacteria 22000
57 Ga0070684_100072141 3300005535 Bacteria 3039
58 Ga0070665_100086208 3300005548 Bacteria 3146
59 Ga0070665_100306870 3300005548 Bacteria 1590
60 Ga0070664_100023240 3300005564 Bacteria 5120
61 Ga0070664_100166105 3300005564 Bacteria 1955
62 Ga0070664_100327403 3300005564 Bacteria 1389
63 Ga0068857_100000647 3300005577 Bacteria 25630
64 Ga0068857_100041205 3300005577 Bacteria 4095
65 Ga0068854_100135297 3300005578 Bacteria 1886
66 Ga0068852_100076666 3300005616 Bacteria 2952
67 Ga0068852_100151692 3300005616 Bacteria 2156
68 Ga0068859_100069852 3300005617 Unclassified 3548
69 Ga0068859_100256231 3300005617 Bacteria 1840
70 Ga0068864_100138109 3300005618 Unclassified 2196
71 Ga0068866_10159596 3300005718 Bacteria 1314
72 Ga0068863_100284798 3300005841 Bacteria 1602
73 Ga0068858_100266354 3300005842 Bacteria 1630
74 Ga0068860_100004813 3300005843 Bacteria 13745
75 Ga0068862_100350616 3300005844 Unclassified 1369
76 Ga0081539_10029924 3300005985 Bacteria 3391
77 Ga0075366_10001762 3300006195 Bacteria 10906
78 Ga0075366_10083463 3300006195 Bacteria 1909
79 Ga0068871_100118983 3300006358 Bacteria 2229
80 Ga0097620_100069853 3300006931 Unclassified 3548
81 Ga0097620_100256224 3300006931 Bacteria 1840
82 Ga0105240_10000087 3300009093 Bacteria 187637
83 Ga0105240_10006453 3300009093 Bacteria 17237
84 Ga0105240_10024639 3300009093 Bacteria 7927
85 Ga0105240_10025705 3300009093 Bacteria 7735
86 Ga0105240_10041256 3300009093 Bacteria 5892
87 Ga0105240_10167281 3300009093 Bacteria 2607
88 Ga0114129_10003859 3300009147 Bacteria 21141
89 Ga0105243_10187909 3300009148 Bacteria 1802
90 Ga0105241_10217559 3300009174 Bacteria 1604
91 Ga0105242_10008158 3300009176 Bacteria 8054
92 Ga0105242_10189369 3300009176 Bacteria 1820
93 Ga0105248_10235908 3300009177 Bacteria 2059
94 Ga0105237_10004574 3300009545 Bacteria 15968
95 Ga0105237_10014435 3300009545 Bacteria 8261
96 Ga0105237_10025400 3300009545 Bacteria 6059
97 Ga0105237_10027803 3300009545 Bacteria 5764
98 Ga0105237_10028649 3300009545 Bacteria 5670
99 Ga0105237_10041795 3300009545 Bacteria 4623
100 Ga0105237_10113404 3300009545 Bacteria 2703
101 Ga0105237_10307819 3300009545 Bacteria 1587
102 Ga0105238_10005263 3300009551 Bacteria 12793
103 Ga0105238_10088947 3300009551 Bacteria 3075
104 Ga0105238_10092259 3300009551 Bacteria 3016
105 Ga0105239_10000006 3300010375 Bacteria 442319
106 Ga0105239_10000029 3300010375 Bacteria 234749
107 Ga0105239_10019223 3300010375 Bacteria 7547
108 Ga0105239_10032593 3300010375 Bacteria 5725
109 Ga0105239_10237995 3300010375 Bacteria 2043
110 Ga0105239_10276342 3300010375 Bacteria 1890
111 Ga0105239_10351168 3300010375 Bacteria 1665
112 Ga0157373_10031829 3300013100 Bacteria 3798
113 Ga0157371_10139212 3300013102 Bacteria 1729
114 Ga0157370_10015711 3300013104 Bacteria 7688
115 Ga0157370_10055809 3300013104 Bacteria 3761
116 Ga0157370_10170346 3300013104 Bacteria 2024
117 Ga0157374_10000001 3300013296 Bacteria 1077351
118 Ga0157374_10000772 3300013296 Bacteria 28005
119 Ga0157374_10144803 3300013296 Bacteria 2308
120 Ga0157378_10154881 3300013297 Bacteria 2138
121 Ga0163162_10003298 3300013306 Bacteria 15443
122 Ga0163162_10017940 3300013306 Bacteria 6926
123 Ga0163162_10030673 3300013306 Bacteria 5328
124 Ga0157372_10000648 3300013307 Bacteria 38170
125 Ga0157372_10011189 3300013307 Bacteria 9542
126 Ga0157372_10212382 3300013307 Bacteria 2242
127 Ga0157372_10291479 3300013307 Bacteria 1898
128 Ga0157375_10007110 3300013308 Bacteria 9776
129 Ga0157375_10031690 3300013308 Bacteria 5004
130 Ga0163163_10012706 3300014325 Bacteria 7680
131 Ga0163163_10118771 3300014325 Bacteria 2677
132 Ga0157380_10018159 3300014326 Bacteria 5218
133 Ga0157377_10083791 3300014745 Bacteria 1869
134 Ga0157379_10085263 3300014968 Bacteria 2831
135 Ga0157376_10001566 3300014969 Bacteria 15131
136 Ga0163161_10013280 3300017792 Bacteria 5726
137 Ga0207427_100093 3300025231 Bacteria 125910
138 Ga0209437_100008 3300025233 Bacteria 921142
139 Ga0209646_1000004 3300025246 Bacteria 786587
140 Ga0209026_1000132 3300025250 Bacteria 119048
141 Ga0209026_1006223 3300025250 Bacteria 2984
142 Ga0209233_1000024 3300025261 Bacteria 695418
143 Ga0209233_1027865 3300025261 Bacteria 1363
144 Ga0209673_1000183 3300025273 Bacteria 126175
145 Ga0209564_1002424 3300025295 Bacteria 14796
146 Ga0209564_1005142 3300025295 Bacteria 7601
147 Ga0209758_1003353 3300025297 Bacteria 14688
148 Ga0209758_1004636 3300025297 Bacteria 11264
149 Ga0209758_1025187 3300025297 Unclassified 2618
150 Ga0209050_1000305 3300025298 Bacteria 100790
151 Ga0207426_1000566 3300025302 Bacteria 50036
152 Ga0207426_1002072 3300025302 Bacteria 13910
153 Ga0209051_1028645 3300025303 Bacteria 2196
154 Ga0209257_1000783 3300025304 Bacteria 46807
155 Ga0207642_10043509 3300025899 Bacteria 1981
156 Ga0207688_10070003 3300025901 Bacteria 1989
157 Ga0207680_10033396 3300025903 Bacteria 2934
158 Ga0207680_10074671 3300025903 Bacteria 2112
159 Ga0207647_10027997 3300025904 Bacteria 3668
160 Ga0207645_10011409 3300025907 Bacteria 6067
161 Ga0207695_10000057 3300025913 Bacteria 376090
162 Ga0207695_10000068 3300025913 Bacteria 324859
163 Ga0207695_10044774 3300025913 Bacteria 4704
164 Ga0207695_10056108 3300025913 Unclassified 4101
165 Ga0207695_10071990 3300025913 Bacteria 3529
166 Ga0207671_10000681 3300025914 Bacteria 44184
167 Ga0207671_10002787 3300025914 Bacteria 18240
168 Ga0207671_10003614 3300025914 Bacteria 15275
169 Ga0207671_10003996 3300025914 Bacteria 14337
170 Ga0207671_10023626 3300025914 Bacteria 4634
171 Ga0207671_10023998 3300025914 Bacteria 4591
172 Ga0207671_10067969 3300025914 Bacteria 2655
173 Ga0207657_10072756 3300025919 Bacteria 2907
174 Ga0207649_10002522 3300025920 Bacteria 10203
175 Ga0207649_10086569 3300025920 Bacteria 2042
176 Ga0207694_10025587 3300025924 Bacteria 4486
177 Ga0207694_10116068 3300025924 Bacteria 2133
178 Ga0207694_10130120 3300025924 Bacteria 2017
179 Ga0207650_10069828 3300025925 Bacteria 2639
180 Ga0207650_10230566 3300025925 Bacteria 1493
181 Ga0207659_10017009 3300025926 Bacteria 4745
182 Ga0207644_10108694 3300025931 Bacteria 2094
183 Ga0207644_10128378 3300025931 Bacteria 1938
184 Ga0207706_10004823 3300025933 Bacteria 12634
185 Ga0207706_10039715 3300025933 Bacteria 4173
186 Ga0207706_10051950 3300025933 Unclassified 3619
187 Ga0207706_10172168 3300025933 Unclassified 1902
188 Ga0207670_10185961 3300025936 Bacteria 1568
189 Ga0207669_10125371 3300025937 Bacteria 1753
190 Ga0207704_10042447 3300025938 Unclassified 2677
191 Ga0207689_10001356 3300025942 Bacteria 23516
192 Ga0207689_10009814 3300025942 Bacteria 8250
193 Ga0207689_10119370 3300025942 Unclassified 2169
194 Ga0207661_10016012 3300025944 Bacteria 5528
195 Ga0207661_10187258 3300025944 Bacteria 1812
196 Ga0207679_10000938 3300025945 Bacteria 18653
197 Ga0207679_10005484 3300025945 Bacteria 7951
198 Ga0207679_10130774 3300025945 Bacteria 2013
199 Ga0207640_10014542 3300025981 Unclassified 4534
200 Ga0207640_10105116 3300025981 Bacteria 1989
201 Ga0207677_10275151 3300026023 Bacteria 1379
202 Ga0207703_10026288 3300026035 Bacteria 4580
203 Ga0207639_10095728 3300026041 Bacteria 2387
204 Ga0207639_10265063 3300026041 Bacteria 1504
205 Ga0207639_10351027 3300026041 Bacteria 1317
206 Ga0207678_10127548 3300026067 Bacteria 2170
207 Ga0207641_10328455 3300026088 Bacteria 1452
208 Ga0207648_10093441 3300026089 Bacteria 2630
209 Ga0207676_10007119 3300026095 Bacteria 7924
210 Ga0207676_10117609 3300026095 Unclassified 2236
211 Ga0207674_10001751 3300026116 Bacteria 27757
212 Ga0207674_10013719 3300026116 Bacteria 8972
213 Ga0207698_10130253 3300026142 Bacteria 2148
214 Ga0268266_10053787 3300028379 Bacteria 3460
215 Ga0268264_10002006 3300028381 Bacteria 18281
216 Ga0307517_10005124 3300028786 Bacteria 19906
217 Ga0307515_10000007 3300028794 Bacteria 719669
218 Ga0307515_10000031 3300028794 Bacteria 358648
219 Ga0307515_10000144 3300028794 Bacteria 170910
220 Ga0307515_10003557 3300028794 Bacteria 32734
221 Ga0307515_10054258 3300028794 Bacteria 5889
222 Ga0307515_10060012 3300028794 Bacteria 5438
223 Ga0307511_10000208 3300030521 Bacteria 59396
224 Ga0307509_10150033 3300031507 Bacteria 2249
225 Ga0307516_10002392 3300031730 Bacteria 25123
226 Ga0307507_10001815 3300033179 Bacteria 46860
227 Ga0307510_10001636 3300033180 Bacteria 24852
228 Ga0373933_0150175 3300035724 Bacteria 1475
229 Ga0373937_0132150 3300036401 Bacteria 2331
230 Ga0466957_0000169 3300044842 Bacteria 29251
231 Ga0466959_0007052 3300045049 Bacteria 7855
232 Ga0495638_0040865 3300046460 Bacteria 2937
233 Ga0495650_0000003 3300046471 Bacteria 900730
234 Ga0495585_0000393 3300046492 Bacteria 42348
235 Ga0495585_0002283 3300046492 Bacteria 13840
236 Ga0495606_0000116 3300046507 Bacteria 134901
237 Ga0495606_0008672 3300046507 Bacteria 8764
238 Ga0495606_0010318 3300046507 Bacteria 7769
239 Ga0495610_0005913 3300046512 Bacteria 8571
240 Ga0495616_0001938 3300046513 Bacteria 13915
241 Ga0495616_0012626 3300046513 Bacteria 4788
242 Ga0495618_0225770 3300046514 Bacteria 1180
243 Ga0495628_0026794 3300046516 Bacteria 4694
244 Ga0495648_0005664 3300046524 Bacteria 10334
245 Ga0495652_0154669 3300046529 Bacteria 1787
246 Ga0495640_0132918 3300046533 Bacteria 1609
247 Ga0495609_0007737 3300046538 Bacteria 5327
248 Ga0495609_0008721 3300046538 Bacteria 4944
249 Ga0495622_0033879 3300046557 Bacteria 2384
250 Ga0495633_0000027 3300046558 Bacteria 204613
251 Ga0495633_0005012 3300046558 Bacteria 8257
252 Ga0495668_0000010 3300046616 Bacteria 487308
253 Ga0495668_0009270 3300046616 Bacteria 6051
254 Ga0495611_0000172 3300046648 Bacteria 46918
255 Ga0495625_0000219 3300046660 Bacteria 90690
256 Ga0495625_0000381 3300046660 Bacteria 67732
257 Ga0495625_0000939 3300046660 Bacteria 39095
258 Ga0495625_0049812 3300046660 Bacteria 3009
259 Ga0495625_0106915 3300046660 Bacteria 1915
260 Ga0495625_0165805 3300046660 Bacteria 1477
261 Ga0495661_0001592 3300046665 Bacteria 18700
262 Ga0495661_0146330 3300046665 Bacteria 1280
263 Ga0495599_0033739 3300046678 Bacteria 3217
264 Ga0495649_0000037 3300046694 Bacteria 133848
265 Ga0495600_0204173 3300046809 Bacteria 1268
266 Ga0495676_0258307 3300047321 Bacteria 1186
267 Ga0495686_0000078 3300047472 Bacteria 203927
268 Ga0495686_0108636 3300047472 Bacteria 1666
269 Ga0495614_0044125 3300048089 Bacteria 1912
270 Ga0496122_0000927 3300048925 Bacteria 53530
271 Ga0496123_0000278 3300048926 Bacteria 100746
272 Ga0496126_0091426 3300048929 Bacteria 2676
273 Ga0501031_0017869 3300049568 Bacteria 4612
274 Ga0501034_0092901 3300049571 Bacteria 3013
275 Ga0501037_0012634 3300049573 Bacteria 6222
276 Ga0501038_0031223 3300049574 Bacteria 4709
277 Ga0501039_0069528 3300049575 Bacteria 2734
278 Ga0501043_0013897 3300049579 Bacteria 6299
279 Ga0501046_0028773 3300049580 Bacteria 4522
280 Ga0501047_0090664 3300049581 Bacteria 2934
281 Ga0501073_0098878 3300049589 Bacteria 2026
282 Ga0501035_0103948 3300049822 Unclassified 2491
283 Ga0501044_0011244 3300049823 Bacteria 9703
284 nmdc:mga0k408_73868_c1 3300050493 Bacteria 1992
285 nmdc:mga05p37_33927_c1 3300050507 Bacteria 6252
286 Ga0495619_0043758 3300053085 Bacteria 2937
287 Ga0500643_000702 3300053087 Bacteria 22236
288 Ga0500583_0000049 3300053092 Bacteria 77456
289 Ga0500583_0000285 3300053092 Bacteria 17604
290 Ga0500583_0024290 3300053092 Unclassified 2569
291 Ga0500618_000013 3300053125 Bacteria 183026
292 Ga0500573_0000045 3300053140 Bacteria 98878
293 Ga0500604_0027687 3300053151 Bacteria 1642
294 Ga0500622_0000605 3300053156 Bacteria 32548
295 Ga0500622_0008799 3300053156 Bacteria 5620
296 2599478576 2599185184 Bacteria 6430550
297 2852623834 2852623160 Bacteria 4376875
298 2884937263 2884933994 Bacteria 4535041
299 2910250793 2910245624 Bacteria 6935613
300 2919442295 2919437846 Bacteria 6199444
301 2928080368 2928078545 Bacteria 6534839
302 2928149459 2928147474 Bacteria 6512076
303 2929922191 2929921140 Bacteria 8649150
304 2932083286 2932082852 Bacteria 6563563
305 2977236725 2977232053 Bacteria 5485925
306 8003155194 8003151029 Bacteria 8187759
307 Ga0163161_10018725
308 JGI24740J21852_10002110
309 JGI24739J22299_10000195
310 JGI24739J22299_10026335
311 JGI24737J22298_10036206
312 JGI24735J21928_10000002
313 JGI25162J39368_1000293
314 JGI25154J39366_1000003
315 JGI25165J46597_1000545
316 JGI25153J46596_10003310
317 JGI25153J46596_10015807
318 JGI25153J46596_10029272
319 rootH2_10013300
320 rootH2_10126189
321 rootH2_10251989
322 rootL2_10069106
323 rootL2_10163161
324 rootH1_10000566
325 rootH1_10026142
326 rootH1_10159204
327 rootH1_10210290
328 JGI25160J50197_1009458
329 Ga0055526_1004862
330 Ga0055528_1000108
331 Ga0055528_1000235
332 Ga0055530_10001980
333 Ga0065165_1000019
334 Ga0065165_1017748
335 Ga0065714_10008362
336 Ga0070683_100004261
337 Ga0070690_100046871
338 Ga0070670_100091156
339 Ga0070670_100278628
340 Ga0068869_100023881
341 Ga0068869_100026517
342 Ga0068869_100118034
343 Ga0070666_10023721
344 Ga0068868_100243974
345 Ga0070660_100064573
346 Ga0070689_100045320
347 Ga0070689_100268396
348 Ga0070661_100037541
349 Ga0070661_100278637
350 Ga0070675_100013634
351 Ga0070673_100043720
352 Ga0070688_100002011
353 Ga0070659_100000221
354 Ga0070667_100326435
355 Ga0070713_100183753
356 Ga0070662_100013158
357 Ga0070662_100046227
358 Ga0070681_10066740
359 Ga0068867_100171307
360 Ga0068867_100186017
361 Ga0070684_100000788
362 Ga0070684_100072141
363 Ga0070665_100086208
364 Ga0070665_100306870
365 Ga0070664_100023240
366 Ga0070664_100166105
367 Ga0070664_100327403
368 Ga0068857_100000647
369 Ga0068857_100041205
370 Ga0068854_100135297
371 Ga0068852_100076666
372 Ga0068852_100151692
373 Ga0068859_100069852
374 Ga0068859_100256231
375 Ga0068864_100138109
376 Ga0068866_10159596
377 Ga0068863_100284798
378 Ga0068858_100266354
379 Ga0068860_100004813
380 Ga0068862_100350616
381 Ga0081539_10029924
382 Ga0075366_10001762
383 Ga0075366_10083463
384 Ga0068871_100118983
385 Ga0097620_100069853
386 Ga0097620_100256224
387 Ga0105240_10000087
388 Ga0105240_10006453
389 Ga0105240_10024639
390 Ga0105240_10025705
391 Ga0105240_10041256
392 Ga0105240_10167281
393 Ga0114129_10003859
394 Ga0105243_10187909
395 Ga0105241_10217559
396 Ga0105242_10008158
397 Ga0105242_10189369
398 Ga0105248_10235908
399 Ga0105237_10004574
400 Ga0105237_10014435
401 Ga0105237_10025400
402 Ga0105237_10027803
403 Ga0105237_10028649
404 Ga0105237_10041795
405 Ga0105237_10113404
406 Ga0105237_10307819
407 Ga0105238_10005263
408 Ga0105238_10088947
409 Ga0105238_10092259
410 Ga0105239_10000006
411 Ga0105239_10000029
412 Ga0105239_10019223
413 Ga0105239_10032593
414 Ga0105239_10237995
415 Ga0105239_10276342
416 Ga0105239_10351168
417 Ga0157373_10031829
418 Ga0157371_10139212
419 Ga0157370_10015711
420 Ga0157370_10055809
421 Ga0157370_10170346
422 Ga0157374_10000001
423 Ga0157374_10000772
424 Ga0157374_10144803
425 Ga0157378_10154881
426 Ga0163162_10003298
427 Ga0163162_10017940
428 Ga0163162_10030673
429 Ga0157372_10000648
430 Ga0157372_10011189
431 Ga0157372_10212382
432 Ga0157372_10291479
433 Ga0157375_10007110
434 Ga0157375_10031690
435 Ga0163163_10012706
436 Ga0163163_10118771
437 Ga0157380_10018159
438 Ga0157377_10083791
439 Ga0157379_10085263
440 Ga0157376_10001566
441 Ga0163161_10013280
442 Ga0207427_100093
443 Ga0209437_100008
444 Ga0209646_1000004
445 Ga0209026_1000132
446 Ga0209026_1006223
447 Ga0209233_1000024
448 Ga0209233_1027865
449 Ga0209673_1000183
450 Ga0209564_1002424
451 Ga0209564_1005142
452 Ga0209758_1003353
453 Ga0209758_1004636
454 Ga0209758_1025187
455 Ga0209050_1000305
456 Ga0207426_1000566
457 Ga0207426_1002072
458 Ga0209051_1028645
459 Ga0209257_1000783
460 Ga0207642_10043509
461 Ga0207688_10070003
462 Ga0207680_10033396
463 Ga0207680_10074671
464 Ga0207647_10027997
465 Ga0207645_10011409
466 Ga0207695_10000057
467 Ga0207695_10000068
468 Ga0207695_10044774
469 Ga0207695_10056108
470 Ga0207695_10071990
471 Ga0207671_10000681
472 Ga0207671_10002787
473 Ga0207671_10003614
474 Ga0207671_10003996
475 Ga0207671_10023626
476 Ga0207671_10023998
477 Ga0207671_10067969
478 Ga0207657_10072756
479 Ga0207649_10002522
480 Ga0207649_10086569
481 Ga0207694_10025587
482 Ga0207694_10116068
483 Ga0207694_10130120
484 Ga0207650_10069828
485 Ga0207650_10230566
486 Ga0207659_10017009
487 Ga0207644_10108694
488 Ga0207644_10128378
489 Ga0207706_10004823
490 Ga0207706_10039715
491 Ga0207706_10051950
492 Ga0207706_10172168
493 Ga0207670_10185961
494 Ga0207669_10125371
495 Ga0207704_10042447
496 Ga0207689_10001356
497 Ga0207689_10009814
498 Ga0207689_10119370
499 Ga0207661_10016012
500 Ga0207661_10187258
501 Ga0207679_10000938
502 Ga0207679_10005484
503 Ga0207679_10130774
504 Ga0207640_10014542
505 Ga0207640_10105116
506 Ga0207677_10275151
507 Ga0207703_10026288
508 Ga0207639_10095728
509 Ga0207639_10265063
510 Ga0207639_10351027
511 Ga0207678_10127548
512 Ga0207641_10328455
513 Ga0207648_10093441
514 Ga0207676_10007119
515 Ga0207676_10117609
516 Ga0207674_10001751
517 Ga0207674_10013719
518 Ga0207698_10130253
519 Ga0268266_10053787
520 Ga0268264_10002006
521 Ga0307517_10005124
522 Ga0307515_10000007
523 Ga0307515_10000031
524 Ga0307515_10000144
525 Ga0307515_10003557
526 Ga0307515_10054258
527 Ga0307515_10060012
528 Ga0307511_10000208
529 Ga0307509_10150033
530 Ga0307516_10002392
531 Ga0307507_10001815
532 Ga0307510_10001636
533 Ga0373933_0150175
534 Ga0373937_0132150
535 Ga0466957_0000169
536 Ga0466959_0007052
537 Ga0495638_0040865
538 Ga0495650_0000003
539 Ga0495585_0000393
540 Ga0495585_0002283
541 Ga0495606_0000116
542 Ga0495606_0008672
543 Ga0495606_0010318
544 Ga0495610_0005913
545 Ga0495616_0001938
546 Ga0495616_0012626
547 Ga0495618_0225770
548 Ga0495628_0026794
549 Ga0495648_0005664
550 Ga0495652_0154669
551 Ga0495640_0132918
552 Ga0495609_0007737
553 Ga0495609_0008721
554 Ga0495622_0033879
555 Ga0495633_0000027
556 Ga0495633_0005012
557 Ga0495668_0000010
558 Ga0495668_0009270
559 Ga0495611_0000172
560 Ga0495625_0000219
561 Ga0495625_0000381
562 Ga0495625_0000939
563 Ga0495625_0049812
564 Ga0495625_0106915
565 Ga0495625_0165805
566 Ga0495661_0001592
567 Ga0495661_0146330
568 Ga0495599_0033739
569 Ga0495649_0000037
570 Ga0495600_0204173
571 Ga0495676_0258307
572 Ga0495686_0000078
573 Ga0495686_0108636
574 Ga0495614_0044125
575 Ga0496122_0000927
576 Ga0496123_0000278
577 Ga0496126_0091426
578 Ga0501031_0017869
579 Ga0501034_0092901
580 Ga0501037_0012634
581 Ga0501038_0031223
582 Ga0501039_0069528
583 Ga0501043_0013897
584 Ga0501046_0028773
585 Ga0501047_0090664
586 Ga0501073_0098878
587 Ga0501035_0103948
588 Ga0501044_0011244
589 nmdc:mga0k408_73868_c1
590 nmdc:mga05p37_33927_c1
591 Ga0495619_0043758
592 Ga0500643_000702
593 Ga0500583_0000049
594 Ga0500583_0000285
595 Ga0500583_0024290
596 Ga0500618_000013
597 Ga0500573_0000045
598 Ga0500604_0027687
599 Ga0500622_0000605
600 Ga0500622_0008799
601 2599478576
602 2852623834
603 2884937263
604 2910250793
605 2919442295
606 2928080368
607 2928149459
608 2929922191
609 2932083286
610 2977236725
611 8003155194

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

92

417

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ly1-assembly1.cif.gz_B crystal structure of putative histidinol-phosphate aminotransferase (yp_050345.1) from erwinia carotovora atroseptica scri1043 at 1.80 a resolution 0.9436 61 388
3get-assembly1.cif.gz_A crystal structure of putative histidinol-phosphate aminotransferase (np_281508.1) from campylobacter jejuni at 2.01 a resolution 0.9029 59 388
3ftb-assembly2.cif.gz_D the crystal structure of the histidinol-phosphate aminotransferase from clostridium acetobutylicum 0.9008 61 388
3get-assembly1.cif.gz_B crystal structure of putative histidinol-phosphate aminotransferase (np_281508.1) from campylobacter jejuni at 2.01 a resolution 0.8979 52 388
8bj4-assembly2.cif.gz_D crystal structure of medicago truncatula histidinol-phosphate aminotransferase (hisn6) in apo form 0.8978 58 387
ID Description Score Start End Superfamily
af_Q2G087_68_261_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9403 99 292 3.40.640.10
af_Q2G087_68_261_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9264 99 292 3.40.640.10
af_P9WML5_24_353_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9252 61 388 3.50.50.60
3ly1D02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9155 75 295 3.40.640.10
af_P9WML5_24_353_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9091 61 388 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A519T7N0-F1-model_v4 Histidinol-phosphate aminotransferase family protein 0.989 56 389 GO:0008483
GO:0009058
GO:0030170
AF-A0A4Q3UVX4-F1-model_v4 Histidinol-phosphate aminotransferase family protein 0.9887 88 389 GO:0008483
GO:0009058
GO:0030170
AF-A0A4Q3UVX4-F1-model_v4 Histidinol-phosphate aminotransferase family protein 0.9791 88 389 GO:0008483
GO:0009058
GO:0030170
AF-A0A2D8KN27-F1-model_v4 Histidinol phosphate aminotransferase 0.9777 62 388 GO:0008483
GO:0009058
GO:0030170
AF-B5JL91-F1-model_v4 Aminotransferase (EC 2.6.1.-) 0.969 79 388 GO:0008483
GO:0009058
GO:0030170

Map