F398340

General Info

Members Datasets Scaffolds Average Seq Length
305 199 610 316

Family's Representative Sequence

Representative Sequence 3300049582|Ga0501048_0189994|Ga0501048_0189994_350_1315
Length 287
Sequence VTGAAGQIGYALLFRIAAGNMLGPDTPVRLKLLEIPDAVKAAEGTALELFDCAFPLLAGIDVTDMERADLLEANGGIFKPQGEAIAAHAADDIKVLVVGNPANTNALIAMSNADGVPSERFTAMTRLDHNRAVAQLADKTGAAVSDISHMAVWGNHSPTMYPDLFNAKVRGERAWDVVGDETWVADQFIPRVGKRGAEIIEARGIDHVRDWVTGTEGDDWVSMAVPSPGAYGVEEGIISSFPCRTKNGEWEIVEGLDVPDFSRERIDRTVNELKEERDAVRGLSLVS

Samples

Sample ID Description Type Environment
1 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
4 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
5 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
6 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
7 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
8 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
43 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
44 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
66 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
97 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
100 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
101 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
102 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
103 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
104 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
105 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
106 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
107 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
108 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
109 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
110 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
111 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
112 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
113 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
114 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
115 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
116 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
117 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
121 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
122 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
123 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
124 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
125 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
126 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
127 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
128 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
129 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
130 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
131 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
132 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
133 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
134 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
135 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
136 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
137 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
138 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
139 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
140 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
141 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
142 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
143 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
144 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
145 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
146 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
147 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
148 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
149 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
150 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
151 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
152 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
153 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
154 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
155 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
156 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
157 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
158 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
159 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
160 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
161 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
162 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
163 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
164 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
165 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
166 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
167 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
168 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
169 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
170 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
171 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
172 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
173 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
174 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
175 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
176 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
177 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
178 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
179 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
180 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
181 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
182 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
183 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
184 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
185 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
186 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
188 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
189 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
190 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
191 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
192 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
193 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
194 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
195 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
196 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
197 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
198 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
199 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.34
Metatranscriptomes 0
Isolates 0.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.33
Nodule 0
Rhizoplane 9.51
Rhizosphere 86.56
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501048_0189994 3300049582 Bacteria 1455
2 LJQas_1002011 3300000549 Bacteria 2922
3 JGI24746J21847_1000122 3300001977 Bacteria 9259
4 JGI24034J26672_10000130 3300002239 Bacteria 11294
5 JGI24742J22300_10005188 3300002244 Bacteria 2142
6 JGI24751J29686_10017999 3300002459 Bacteria 1460
7 JGI25406J46586_10006114 3300003203 Bacteria 5559
8 JGI25407J50210_10035887 3300003373 Bacteria 1276
9 Ga0070683_100029156 3300005329 Bacteria 4994
10 Ga0070683_100140639 3300005329 Bacteria 2287
11 Ga0070683_100471664 3300005329 Bacteria 1198
12 Ga0070677_10000013 3300005333 Bacteria 53677
13 Ga0070680_100084321 3300005336 Bacteria 2624
14 Ga0070682_100000077 3300005337 Bacteria 89055
15 Ga0068868_100000008 3300005338 Bacteria 121926
16 Ga0068868_100059202 3300005338 Bacteria 3029
17 Ga0070660_100083703 3300005339 Bacteria 2506
18 Ga0070687_100110491 3300005343 Bacteria 1555
19 Ga0070675_100458860 3300005354 Bacteria 1143
20 Ga0070674_100000001 3300005356 Bacteria 277173
21 Ga0070674_100424446 3300005356 Bacteria 1092
22 Ga0070659_100116438 3300005366 Bacteria 2160
23 Ga0070714_100015261 3300005435 Bacteria 6179
24 Ga0070713_100055278 3300005436 Bacteria 3297
25 Ga0070700_100073752 3300005441 Bacteria 2185
26 Ga0070663_100056346 3300005455 Bacteria 2816
27 Ga0070662_100000038 3300005457 Bacteria 75003
28 Ga0068867_100000814 3300005459 Bacteria 21051
29 Ga0068867_100145135 3300005459 Bacteria 1859
30 Ga0070679_100000069 3300005530 Bacteria 76557
31 Ga0070684_100009929 3300005535 Bacteria 7525
32 Ga0070684_100013731 3300005535 Bacteria 6536
33 Ga0070684_100025703 3300005535 Bacteria 4952
34 Ga0070684_100232232 3300005535 Bacteria 1684
35 Ga0068853_100003809 3300005539 Bacteria 11559
36 Ga0070695_100091397 3300005545 Bacteria 2033
37 Ga0070693_100004639 3300005547 Bacteria 6523
38 Ga0070665_100000068 3300005548 Bacteria 204531
39 Ga0070704_100106937 3300005549 Bacteria 2121
40 Ga0068856_100000210 3300005614 Bacteria 63036
41 Ga0068856_100186132 3300005614 Bacteria 2090
42 Ga0070702_100029064 3300005615 Bacteria 3002
43 Ga0068852_100235655 3300005616 Bacteria 1747
44 Ga0068852_100344261 3300005616 Bacteria 1454
45 Ga0068864_100000024 3300005618 Bacteria 252632
46 Ga0068864_100123058 3300005618 Bacteria 2322
47 Ga0068866_10000011 3300005718 Bacteria 97191
48 Ga0068866_10000149 3300005718 Bacteria 31747
49 Ga0068863_100000004 3300005841 Bacteria 272478
50 Ga0068858_100000012 3300005842 Bacteria 216931
51 Ga0068858_100000131 3300005842 Bacteria 77960
52 Ga0068860_100005001 3300005843 Bacteria 13503
53 Ga0081538_10002594 3300005981 Bacteria 17530
54 Ga0081538_10004390 3300005981 Bacteria 13024
55 Ga0081538_10009539 3300005981 Bacteria 8080
56 Ga0081538_10010387 3300005981 Bacteria 7634
57 Ga0081538_10026442 3300005981 Bacteria 4058
58 Ga0081538_10028297 3300005981 Bacteria 3859
59 Ga0081538_10029022 3300005981 Bacteria 3789
60 Ga0081538_10038357 3300005981 Bacteria 3092
61 Ga0081538_10050087 3300005981 Bacteria 2527
62 Ga0081538_10058430 3300005981 Bacteria 2237
63 Ga0070717_10002504 3300006028 Bacteria 12955
64 Ga0070717_10022676 3300006028 Bacteria 4964
65 Ga0070717_10069565 3300006028 Bacteria 2932
66 Ga0075432_10017652 3300006058 Bacteria 2433
67 Ga0070715_10000011 3300006163 Bacteria 183857
68 Ga0070712_100000009 3300006175 Bacteria 143615
69 Ga0075433_10003676 3300006852 Bacteria 11864
70 Ga0068865_100046686 3300006881 Bacteria 2973
71 Ga0111539_10018918 3300009094 Bacteria 8517
72 Ga0105245_10000147 3300009098 Bacteria 66496
73 Ga0105245_10005525 3300009098 Bacteria 11105
74 Ga0105247_10081314 3300009101 Bacteria 2042
75 Ga0114129_10014159 3300009147 Bacteria 11362
76 Ga0114129_10085408 3300009147 Bacteria 4378
77 Ga0105243_10014125 3300009148 Bacteria 6040
78 Ga0105243_10162393 3300009148 Bacteria 1927
79 Ga0105243_10350099 3300009148 Bacteria 1356
80 Ga0105242_10111801 3300009176 Bacteria 2330
81 Ga0105238_10000172 3300009551 Bacteria 70799
82 Ga0105249_10000235 3300009553 Bacteria 62630
83 Ga0105246_10240265 3300011119 Bacteria 1431
84 Ga0157370_10009929 3300013104 Bacteria 10081
85 Ga0157374_10016258 3300013296 Bacteria 6539
86 Ga0157374_10077577 3300013296 Bacteria 3145
87 Ga0163162_10115228 3300013306 Bacteria 2787
88 Ga0157372_10425815 3300013307 Bacteria 1547
89 Ga0157375_10041215 3300013308 Bacteria 4457
90 Ga0163163_10483193 3300014325 Bacteria 1300
91 Ga0157380_10005377 3300014326 Bacteria 8949
92 Ga0157377_10020104 3300014745 Bacteria 3493
93 Ga0157377_10149492 3300014745 Bacteria 1443
94 Ga0163161_10000018 3300017792 Bacteria 228801
95 Ga0213876_10006392 3300021384 Bacteria 6425
96 Ga0213876_10047353 3300021384 Bacteria 2273
97 Ga0207682_10000038 3300025893 Bacteria 53885
98 Ga0207642_10000010 3300025899 Bacteria 99207
99 Ga0207642_10000044 3300025899 Bacteria 35749
100 Ga0207642_10058715 3300025899 Bacteria 1776
101 Ga0207688_10060112 3300025901 Bacteria 2140
102 Ga0207685_10000001 3300025905 Bacteria 604473
103 Ga0207705_10129306 3300025909 Bacteria 1878
104 Ga0207693_10000036 3300025915 Bacteria 109562
105 Ga0207693_10260262 3300025915 Bacteria 1361
106 Ga0207663_10110401 3300025916 Bacteria 1865
107 Ga0207660_10145347 3300025917 Bacteria 1817
108 Ga0207657_10062246 3300025919 Bacteria 3196
109 Ga0207657_10191120 3300025919 Bacteria 1651
110 Ga0207657_10217988 3300025919 Bacteria 1530
111 Ga0207652_10000142 3300025921 Bacteria 76696
112 Ga0207687_10000026 3300025927 Bacteria 173968
113 Ga0207687_10000133 3300025927 Bacteria 49874
114 Ga0207690_10047580 3300025932 Bacteria 2847
115 Ga0207690_10111900 3300025932 Bacteria 1968
116 Ga0207706_10000026 3300025933 Bacteria 149379
117 Ga0207706_10032675 3300025933 Bacteria 4632
118 Ga0207686_10063800 3300025934 Bacteria 2344
119 Ga0207709_10113075 3300025935 Bacteria 1819
120 Ga0207709_10229028 3300025935 Bacteria 1345
121 Ga0207669_10000002 3300025937 Bacteria 377651
122 Ga0207669_10000025 3300025937 Bacteria 93633
123 Ga0207661_10004059 3300025944 Bacteria 10225
124 Ga0207661_10049302 3300025944 Bacteria 3351
125 Ga0207661_10050034 3300025944 Bacteria 3328
126 Ga0207661_10336947 3300025944 Bacteria 1359
127 Ga0207679_10166151 3300025945 Bacteria 1812
128 Ga0207651_10006354 3300025960 Bacteria 6176
129 Ga0207640_10042309 3300025981 Bacteria 2904
130 Ga0207677_10000142 3300026023 Bacteria 58625
131 Ga0207677_10226709 3300026023 Bacteria 1502
132 Ga0207703_10000111 3300026035 Bacteria 96592
133 Ga0207703_10000550 3300026035 Bacteria 38556
134 Ga0207639_10002159 3300026041 Bacteria 13247
135 Ga0207678_10131715 3300026067 Bacteria 2133
136 Ga0207708_10182603 3300026075 Bacteria 1666
137 Ga0207702_10000264 3300026078 Bacteria 60267
138 Ga0207702_10019410 3300026078 Bacteria 5625
139 Ga0207702_10364385 3300026078 Bacteria 1386
140 Ga0207641_10000129 3300026088 Bacteria 110871
141 Ga0207648_10000271 3300026089 Bacteria 56175
142 Ga0207648_10078228 3300026089 Bacteria 2885
143 Ga0207676_10000065 3300026095 Bacteria 105757
144 Ga0207675_100157389 3300026118 Bacteria 2165
145 Ga0207428_10027388 3300027907 Bacteria 4745
146 Ga0207428_10230321 3300027907 Bacteria 1387
147 Ga0268266_10000020 3300028379 Bacteria 527065
148 Ga0268264_10006153 3300028381 Bacteria 10136
149 Ga0268264_10277947 3300028381 Bacteria 1567
150 Ga0265337_1001606 3300028556 Bacteria 11032
151 Ga0265326_10000097 3300028558 Bacteria 44959
152 Ga0265322_10000009 3300028654 Bacteria 170768
153 Ga0265338_10288843 3300028800 Bacteria 1196
154 Ga0265324_10001939 3300029957 Bacteria 11097
155 Ga0265328_10005790 3300031239 Bacteria 5276
156 Ga0265320_10000024 3300031240 Bacteria 170768
157 Ga0265329_10003134 3300031242 Bacteria 7283
158 Ga0265331_10002941 3300031250 Bacteria 11241
159 Ga0265327_10000649 3300031251 Bacteria 56238
160 Ga0265314_10000898 3300031711 Bacteria 35392
161 Ga0307405_10070083 3300031731 Bacteria 2250
162 Ga0307405_10314776 3300031731 Bacteria 1193
163 Ga0307406_10057721 3300031901 Bacteria 2491
164 Ga0307406_10110038 3300031901 Bacteria 1895
165 Ga0307412_10106832 3300031911 Bacteria 1991
166 Ga0307409_100024601 3300031995 Bacteria 4203
167 Ga0307409_100052130 3300031995 Bacteria 3135
168 Ga0307409_100079020 3300031995 Bacteria 2649
169 Ga0307409_100246202 3300031995 Bacteria 1631
170 Ga0307409_100450311 3300031995 Bacteria 1242
171 Ga0307416_100006253 3300032002 Bacteria 7437
172 Ga0307416_100331423 3300032002 Bacteria 1530
173 Ga0307411_10071753 3300032005 Bacteria 2349
174 Ga0307415_100017895 3300032126 Bacteria 4262
175 Ga0307415_100027715 3300032126 Bacteria 3593
176 Ga0373937_0151474 3300036401 Bacteria 2173
177 Ga0436364_0087775 3300037853 Bacteria 1591
178 Ga0436364_1409964 3300037853 Bacteria 1274
179 Ga0395901_0258472 3300038443 Bacteria 1813
180 Ga0436365_0117251 3300039437 Bacteria 26352
181 Ga0436365_0826798 3300039437 Bacteria 8111
182 Ga0436365_1582621 3300039437 Bacteria 3082
183 Ga0436363_1683745 3300039450 Bacteria 4903
184 Ga0436362_1050798 3300039453 Bacteria 7740
185 Ga0451795_0558280 3300041456 Bacteria 1398
186 Ga0451853_1809264 3300041512 Bacteria 1097
187 Ga0451577_0000898 3300042876 Bacteria 44057
188 Ga0466965_0023296 3300044683 Bacteria 2990
189 Ga0466965_0054543 3300044683 Bacteria 1988
190 Ga0466961_0016669 3300044693 Bacteria 4724
191 Ga0466961_0144213 3300044693 Bacteria 1490
192 Ga0466963_0000547 3300044694 Bacteria 17653
193 Ga0466963_0005104 3300044694 Bacteria 7670
194 Ga0466963_0046326 3300044694 Bacteria 2866
195 Ga0466957_0026161 3300044842 Bacteria 3461
196 Ga0466959_0016410 3300045049 Bacteria 5410
197 Ga0466958_0003327 3300045836 Bacteria 8329
198 Ga0466958_0077854 3300045836 Bacteria 2037
199 Ga0466967_0001425 3300045976 Bacteria 13857
200 Ga0466967_0032082 3300045976 Bacteria 4431
201 Ga0466967_0074000 3300045976 Bacteria 3058
202 Ga0466967_0126528 3300045976 Bacteria 2367
203 Ga0466967_0177475 3300045976 Bacteria 2007
204 Ga0466967_0412213 3300045976 Bacteria 1316
205 Ga0495592_0000428 3300046454 Bacteria 31801
206 Ga0495592_0079092 3300046454 Bacteria 2380
207 Ga0495603_0003276 3300046455 Bacteria 9641
208 Ga0495603_0019589 3300046455 Bacteria 4096
209 Ga0495591_062002 3300046458 Bacteria 991
210 Ga0495641_0000020 3300046461 Bacteria 115404
211 Ga0495641_0074118 3300046461 Bacteria 1527
212 Ga0495651_0135687 3300046462 Bacteria 1791
213 Ga0495651_0190187 3300046462 Bacteria 1445
214 Ga0495653_0053232 3300046463 Bacteria 3098
215 Ga0495582_0000013 3300046473 Bacteria 110372
216 Ga0495639_0067020 3300046475 Bacteria 1653
217 Ga0495662_0000021 3300046476 Bacteria 54969
218 Ga0495608_0000854 3300046511 Bacteria 21319
219 Ga0495608_0012717 3300046511 Bacteria 5840
220 Ga0495618_0000058 3300046514 Bacteria 79638
221 Ga0495620_0015553 3300046515 Bacteria 3837
222 Ga0495628_0009068 3300046516 Bacteria 8508
223 Ga0495630_0005396 3300046517 Bacteria 9021
224 Ga0495630_0165750 3300046517 Bacteria 1682
225 Ga0495644_0001822 3300046523 Bacteria 8587
226 Ga0495652_0176684 3300046529 Bacteria 1643
227 Ga0495586_0002849 3300046535 Bacteria 9341
228 Ga0495587_0012963 3300046536 Bacteria 5241
229 Ga0495667_0000022 3300046559 Bacteria 176919
230 Ga0495656_0003084 3300046615 Bacteria 5599
231 Ga0495634_0000063 3300046642 Bacteria 86878
232 Ga0495634_0000193 3300046642 Bacteria 56072
233 Ga0495634_0016801 3300046642 Bacteria 5228
234 Ga0495634_0043099 3300046642 Bacteria 3059
235 Ga0495635_0000026 3300046663 Bacteria 142517
236 Ga0495635_0138041 3300046663 Bacteria 1661
237 Ga0495657_0009280 3300046675 Bacteria 7466
238 Ga0495599_0037367 3300046678 Bacteria 3050
239 Ga0495658_0000009 3300046683 Bacteria 110421
240 Ga0495669_0000103 3300046684 Bacteria 53749
241 Ga0495669_0014273 3300046684 Bacteria 3397
242 Ga0495613_0000157 3300046689 Bacteria 66401
243 Ga0495624_0000012 3300046690 Bacteria 124128
244 Ga0495670_0007137 3300046691 Bacteria 5499
245 Ga0495604_0000346 3300047317 Bacteria 41587
246 Ga0495674_0186056 3300047319 Bacteria 1728
247 Ga0495676_0015881 3300047321 Bacteria 6691
248 Ga0495676_0125785 3300047321 Bacteria 1858
249 Ga0495680_0000952 3300047322 Bacteria 32176
250 Ga0495680_0002682 3300047322 Bacteria 17969
251 Ga0495680_0027750 3300047322 Bacteria 4646
252 Ga0495685_043623 3300047447 Bacteria 1530
253 Ga0495673_0122828 3300047469 Bacteria 1027
254 Ga0495684_0289041 3300047471 Bacteria 1181
255 Ga0495602_0182973 3300048088 Bacteria 1614
256 Ga0496100_0000007 3300048903 Bacteria 261266
257 Ga0496101_0000013 3300048904 Bacteria 261266
258 Ga0496104_0000013 3300048907 Bacteria 397163
259 Ga0496104_0120483 3300048907 Bacteria 2519
260 Ga0496105_0000006 3300048908 Bacteria 393578
261 Ga0496105_0005263 3300048908 Bacteria 9806
262 Ga0496106_0000006 3300048909 Bacteria 251855
263 Ga0496106_0000049 3300048909 Bacteria 97550
264 Ga0496107_0000007 3300048910 Bacteria 257113
265 Ga0496107_0012980 3300048910 Bacteria 5821
266 Ga0496108_0000001 3300048911 Bacteria 919044
267 Ga0496108_0005308 3300048911 Bacteria 10401
268 Ga0496108_0155288 3300048911 Bacteria 1976
269 Ga0496108_0265150 3300048911 Bacteria 1495
270 Ga0496109_0000006 3300048912 Bacteria 325513
271 Ga0496109_0000021 3300048912 Bacteria 189945
272 Ga0496109_0040509 3300048912 Bacteria 4220
273 Ga0496109_0177986 3300048912 Bacteria 1997
274 Ga0496109_0280570 3300048912 Bacteria 1570
275 Ga0496110_0030681 3300048913 Bacteria 4635
276 Ga0496110_0110392 3300048913 Bacteria 2471
277 Ga0496111_0080660 3300048914 Bacteria 2374
278 Ga0496111_0157428 3300048914 Bacteria 1686
279 Ga0496112_0000003 3300048915 Bacteria 660147
280 Ga0496113_0020716 3300048916 Bacteria 4629
281 Ga0496113_0174664 3300048916 Bacteria 1702
282 Ga0496114_0009454 3300048917 Bacteria 7738
283 Ga0496115_0116522 3300048918 Bacteria 2197
284 Ga0496121_0107012 3300048924 Bacteria 2143
285 Ga0501039_0011436 3300049575 Bacteria 6757
286 Ga0501041_0041712 3300049577 Bacteria 2788
287 Ga0501048_0104699 3300049582 Bacteria 1997
288 Ga0501075_0122267 3300049591 Bacteria 1981
289 Ga0501035_0084421 3300049822 Bacteria 2801
290 nmdc:mga08y16_106552_c1 3300050511 Bacteria 2918
291 nmdc:mga08y16_290095_c1 3300050511 Bacteria 1687
292 nmdc:mga0a205_1_c2 3300050515 Bacteria 266330
293 nmdc:mga0a205_3451_c1 3300050515 Bacteria 14111
294 Ga0495601_0002152 3300053077 Bacteria 11084
295 Ga0495595_0000167 3300053084 Bacteria 25731
296 Ga0495619_0000032 3300053085 Bacteria 139067
297 Ga0495619_0000327 3300053085 Bacteria 33238
298 Ga0495619_0075321 3300053085 Bacteria 2265
299 Ga0500614_000672 3300053123 Bacteria 8744
300 Ga0501084_0177665 3300054114 Bacteria 1797
301 Ga0466962_0003046 3300061719 Bacteria 7991
302 Ga0466962_0085823 3300061719 Bacteria 1507
303 Ga0530510_0067999 3300061734 Bacteria 2585
304 2812364470 2811994880 Bacteria 4147780
305 2887447185 2887443736 Bacteria 4426037
306 Ga0501048_0189994
307 LJQas_1002011
308 JGI24746J21847_1000122
309 JGI24034J26672_10000130
310 JGI24742J22300_10005188
311 JGI24751J29686_10017999
312 JGI25406J46586_10006114
313 JGI25407J50210_10035887
314 Ga0070683_100029156
315 Ga0070683_100140639
316 Ga0070683_100471664
317 Ga0070677_10000013
318 Ga0070680_100084321
319 Ga0070682_100000077
320 Ga0068868_100000008
321 Ga0068868_100059202
322 Ga0070660_100083703
323 Ga0070687_100110491
324 Ga0070675_100458860
325 Ga0070674_100000001
326 Ga0070674_100424446
327 Ga0070659_100116438
328 Ga0070714_100015261
329 Ga0070713_100055278
330 Ga0070700_100073752
331 Ga0070663_100056346
332 Ga0070662_100000038
333 Ga0068867_100000814
334 Ga0068867_100145135
335 Ga0070679_100000069
336 Ga0070684_100009929
337 Ga0070684_100013731
338 Ga0070684_100025703
339 Ga0070684_100232232
340 Ga0068853_100003809
341 Ga0070695_100091397
342 Ga0070693_100004639
343 Ga0070665_100000068
344 Ga0070704_100106937
345 Ga0068856_100000210
346 Ga0068856_100186132
347 Ga0070702_100029064
348 Ga0068852_100235655
349 Ga0068852_100344261
350 Ga0068864_100000024
351 Ga0068864_100123058
352 Ga0068866_10000011
353 Ga0068866_10000149
354 Ga0068863_100000004
355 Ga0068858_100000012
356 Ga0068858_100000131
357 Ga0068860_100005001
358 Ga0081538_10002594
359 Ga0081538_10004390
360 Ga0081538_10009539
361 Ga0081538_10010387
362 Ga0081538_10026442
363 Ga0081538_10028297
364 Ga0081538_10029022
365 Ga0081538_10038357
366 Ga0081538_10050087
367 Ga0081538_10058430
368 Ga0070717_10002504
369 Ga0070717_10022676
370 Ga0070717_10069565
371 Ga0075432_10017652
372 Ga0070715_10000011
373 Ga0070712_100000009
374 Ga0075433_10003676
375 Ga0068865_100046686
376 Ga0111539_10018918
377 Ga0105245_10000147
378 Ga0105245_10005525
379 Ga0105247_10081314
380 Ga0114129_10014159
381 Ga0114129_10085408
382 Ga0105243_10014125
383 Ga0105243_10162393
384 Ga0105243_10350099
385 Ga0105242_10111801
386 Ga0105238_10000172
387 Ga0105249_10000235
388 Ga0105246_10240265
389 Ga0157370_10009929
390 Ga0157374_10016258
391 Ga0157374_10077577
392 Ga0163162_10115228
393 Ga0157372_10425815
394 Ga0157375_10041215
395 Ga0163163_10483193
396 Ga0157380_10005377
397 Ga0157377_10020104
398 Ga0157377_10149492
399 Ga0163161_10000018
400 Ga0213876_10006392
401 Ga0213876_10047353
402 Ga0207682_10000038
403 Ga0207642_10000010
404 Ga0207642_10000044
405 Ga0207642_10058715
406 Ga0207688_10060112
407 Ga0207685_10000001
408 Ga0207705_10129306
409 Ga0207693_10000036
410 Ga0207693_10260262
411 Ga0207663_10110401
412 Ga0207660_10145347
413 Ga0207657_10062246
414 Ga0207657_10191120
415 Ga0207657_10217988
416 Ga0207652_10000142
417 Ga0207687_10000026
418 Ga0207687_10000133
419 Ga0207690_10047580
420 Ga0207690_10111900
421 Ga0207706_10000026
422 Ga0207706_10032675
423 Ga0207686_10063800
424 Ga0207709_10113075
425 Ga0207709_10229028
426 Ga0207669_10000002
427 Ga0207669_10000025
428 Ga0207661_10004059
429 Ga0207661_10049302
430 Ga0207661_10050034
431 Ga0207661_10336947
432 Ga0207679_10166151
433 Ga0207651_10006354
434 Ga0207640_10042309
435 Ga0207677_10000142
436 Ga0207677_10226709
437 Ga0207703_10000111
438 Ga0207703_10000550
439 Ga0207639_10002159
440 Ga0207678_10131715
441 Ga0207708_10182603
442 Ga0207702_10000264
443 Ga0207702_10019410
444 Ga0207702_10364385
445 Ga0207641_10000129
446 Ga0207648_10000271
447 Ga0207648_10078228
448 Ga0207676_10000065
449 Ga0207675_100157389
450 Ga0207428_10027388
451 Ga0207428_10230321
452 Ga0268266_10000020
453 Ga0268264_10006153
454 Ga0268264_10277947
455 Ga0265337_1001606
456 Ga0265326_10000097
457 Ga0265322_10000009
458 Ga0265338_10288843
459 Ga0265324_10001939
460 Ga0265328_10005790
461 Ga0265320_10000024
462 Ga0265329_10003134
463 Ga0265331_10002941
464 Ga0265327_10000649
465 Ga0265314_10000898
466 Ga0307405_10070083
467 Ga0307405_10314776
468 Ga0307406_10057721
469 Ga0307406_10110038
470 Ga0307412_10106832
471 Ga0307409_100024601
472 Ga0307409_100052130
473 Ga0307409_100079020
474 Ga0307409_100246202
475 Ga0307409_100450311
476 Ga0307416_100006253
477 Ga0307416_100331423
478 Ga0307411_10071753
479 Ga0307415_100017895
480 Ga0307415_100027715
481 Ga0373937_0151474
482 Ga0436364_0087775
483 Ga0436364_1409964
484 Ga0395901_0258472
485 Ga0436365_0117251
486 Ga0436365_0826798
487 Ga0436365_1582621
488 Ga0436363_1683745
489 Ga0436362_1050798
490 Ga0451795_0558280
491 Ga0451853_1809264
492 Ga0451577_0000898
493 Ga0466965_0023296
494 Ga0466965_0054543
495 Ga0466961_0016669
496 Ga0466961_0144213
497 Ga0466963_0000547
498 Ga0466963_0005104
499 Ga0466963_0046326
500 Ga0466957_0026161
501 Ga0466959_0016410
502 Ga0466958_0003327
503 Ga0466958_0077854
504 Ga0466967_0001425
505 Ga0466967_0032082
506 Ga0466967_0074000
507 Ga0466967_0126528
508 Ga0466967_0177475
509 Ga0466967_0412213
510 Ga0495592_0000428
511 Ga0495592_0079092
512 Ga0495603_0003276
513 Ga0495603_0019589
514 Ga0495591_062002
515 Ga0495641_0000020
516 Ga0495641_0074118
517 Ga0495651_0135687
518 Ga0495651_0190187
519 Ga0495653_0053232
520 Ga0495582_0000013
521 Ga0495639_0067020
522 Ga0495662_0000021
523 Ga0495608_0000854
524 Ga0495608_0012717
525 Ga0495618_0000058
526 Ga0495620_0015553
527 Ga0495628_0009068
528 Ga0495630_0005396
529 Ga0495630_0165750
530 Ga0495644_0001822
531 Ga0495652_0176684
532 Ga0495586_0002849
533 Ga0495587_0012963
534 Ga0495667_0000022
535 Ga0495656_0003084
536 Ga0495634_0000063
537 Ga0495634_0000193
538 Ga0495634_0016801
539 Ga0495634_0043099
540 Ga0495635_0000026
541 Ga0495635_0138041
542 Ga0495657_0009280
543 Ga0495599_0037367
544 Ga0495658_0000009
545 Ga0495669_0000103
546 Ga0495669_0014273
547 Ga0495613_0000157
548 Ga0495624_0000012
549 Ga0495670_0007137
550 Ga0495604_0000346
551 Ga0495674_0186056
552 Ga0495676_0015881
553 Ga0495676_0125785
554 Ga0495680_0000952
555 Ga0495680_0002682
556 Ga0495680_0027750
557 Ga0495685_043623
558 Ga0495673_0122828
559 Ga0495684_0289041
560 Ga0495602_0182973
561 Ga0496100_0000007
562 Ga0496101_0000013
563 Ga0496104_0000013
564 Ga0496104_0120483
565 Ga0496105_0000006
566 Ga0496105_0005263
567 Ga0496106_0000006
568 Ga0496106_0000049
569 Ga0496107_0000007
570 Ga0496107_0012980
571 Ga0496108_0000001
572 Ga0496108_0005308
573 Ga0496108_0155288
574 Ga0496108_0265150
575 Ga0496109_0000006
576 Ga0496109_0000021
577 Ga0496109_0040509
578 Ga0496109_0177986
579 Ga0496109_0280570
580 Ga0496110_0030681
581 Ga0496110_0110392
582 Ga0496111_0080660
583 Ga0496111_0157428
584 Ga0496112_0000003
585 Ga0496113_0020716
586 Ga0496113_0174664
587 Ga0496114_0009454
588 Ga0496115_0116522
589 Ga0496121_0107012
590 Ga0501039_0011436
591 Ga0501041_0041712
592 Ga0501048_0104699
593 Ga0501075_0122267
594 Ga0501035_0084421
595 nmdc:mga08y16_106552_c1
596 nmdc:mga08y16_290095_c1
597 nmdc:mga0a205_1_c2
598 nmdc:mga0a205_3451_c1
599 Ga0495601_0002152
600 Ga0495595_0000167
601 Ga0495619_0000032
602 Ga0495619_0000327
603 Ga0495619_0075321
604 Ga0500614_000672
605 Ga0501084_0177665
606 Ga0466962_0003046
607 Ga0466962_0085823
608 Ga0530510_0067999
609 2812364470
610 2887447185

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02866

Ldh_1_C

lactate/malate dehydrogenase, alpha/beta C-terminal domain

125

282

0.94

PF00056

Ldh_1_N

lactate/malate dehydrogenase, NAD binding domain

56

122

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6pbl-assembly1.cif.gz_B crystal structure of malate dehydrogenase from legionella pneumophila philadelphia 1 0.9608 3 319
5kvv-assembly1.cif.gz_B structure of malate dehydrogenase in complex with nadh from mycobacterium tuberculosis 0.9584 3 320
1wzi-assembly1.cif.gz_A structural basis for alteration of cofactor specificity of malate dehydrogenase from thermus flavus 0.9581 1 320
3d5t-assembly2.cif.gz_C crystal structure of malate dehydrogenase from burkholderia pseudomallei 0.9576 2 316
2cvq-assembly1.cif.gz_B crystal structure of nad(h)-dependent malate dehydrogenase complexed with nadph 0.9575 1 320
ID Description Score Start End Superfamily
af_Q4D123_7_158_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.981 5 151 3.40.50.720
4uuoA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9763 3 151 3.40.50.720
7mdhC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9709 2 151 3.40.50.720
af_A0A1D6HWW8_53_199_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9567 11 152 3.40.50.720
4uuoA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9511 3 151 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A3C1DL03-F1-model_v4 Malate dehydrogenase (EC 1.1.1.37) 1.004 2 82 GO:0006108
GO:0030060
AF-A0A7K2EB87-F1-model_v4 Malate dehydrogenase (EC 1.1.1.37) 1.002 2 80 GO:0006108
GO:0030060
AF-A0A7Y6HZS5-F1-model_v4 deleted 1.001 238 320
AF-A0A6M1ZFR5-F1-model_v4 Malate dehydrogenase (EC 1.1.1.37) 0.9986 3 84 GO:0006108
GO:0030060
AF-A0A536LAS9-F1-model_v4 Malate dehydrogenase (EC 1.1.1.37) 0.9979 3 71 GO:0006108
GO:0030060

Map