F398399

General Info

Members Datasets Scaffolds Average Seq Length
305 188 610 455

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2599185184|2599480285
Length 483
Sequence TDTIVALATPNGVGAIAVIRLSGPDAINIANSVFKGKDLSKQASHTIHFGSIADGDLILDEVLVSLFVGPRSYTRENVVEISCHASGYIIESIIKLFIKKGARSAKPGEFTLRAFLNGQLDLSQAEAVADLIASNSKASQQVALQQLRGGFSTQLQALREQLVNFASLIELELDFAEEDVEFANRDQLKQLIHEITKIVGRLINSFELGNAIKNGVNTVIAGRPNAGKSTLLNALLNEERAIVSHIPGTTRDTIEEVLNIQGINFRLIDTAGIREATDAIEQIGVQRTMEKISQSALLVYVFDAAKITIEELNSDIASLQKPGVTMLVVANKADLLNKSESQKVEKSERSFADLFDNAYSFGERGLFTSPSPDFRTFGLPDIIFISAKEKHHIDDLKHKIYSSAVKNQLSGDETLVTNIRHLEALQKTEEALVRVLGGIDGSITSDFLSMDIKQALHYLGEITGVVTTDDLLENIFSKFCIGK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
6 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
9 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
10 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
16 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
17 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
18 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
41 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
52 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
53 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
56 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
58 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
59 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
60 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
61 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
62 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
63 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
65 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
66 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
86 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
87 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
88 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
89 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
90 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
91 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
92 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
93 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
94 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
95 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
98 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
99 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
100 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
107 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
108 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
109 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
110 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
111 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
112 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
113 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
114 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
115 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
116 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
117 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
118 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
119 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
120 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
121 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
122 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
123 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
124 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
125 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
126 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
127 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
128 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
129 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
130 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
131 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
132 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
133 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
139 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
141 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
142 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
143 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
144 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
145 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
146 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
147 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
148 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
149 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
150 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
151 2738541283 Pedobacter sp. OK701 Isolate Unclassified
152 2738541284 Pedobacter sp. YR016 Isolate Unclassified
153 2738541302 Pedobacter sp. CF074 Isolate Unclassified
154 2738543023 Pedobacter sp. OK628 Isolate Unclassified
155 2739367651 Pedobacter sp. OK291 Isolate Unclassified
156 2739367656 Pedobacter sp. CF523 Isolate Unclassified
157 2739367663 Pedobacter sp. YR510 Isolate Unclassified
158 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
159 2818991437 Pedobacter terrae 518 Isolate Unclassified
160 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
161 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
162 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
163 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
164 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
165 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
166 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
167 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
168 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
169 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
170 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
171 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
172 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
173 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
174 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
175 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
176 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
177 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
178 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
179 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
180 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
181 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
182 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
183 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
184 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
185 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
186 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
187 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
188 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.56
Metatranscriptomes 0
Isolates 13.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.84
Nodule 0
Rhizoplane 0.33
Rhizosphere 77.05
Stem 0
Stem Tuber 0
Unclassified 0.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2418591 2162886007 Bacteria 39679
2 JGI24737J22298_10000757 3300001990 Bacteria 11399
3 JGI24735J21928_10000013 3300002067 Bacteria 208663
4 JGI24735J21928_10002913 3300002067 Bacteria 5887
5 JGI25162J39368_1000223 3300002737 Bacteria 58437
6 JGI25162J39368_1001969 3300002737 Bacteria 9211
7 JGI25152J39213_1000635 3300002773 Bacteria 18579
8 JGI25150J39212_1000030 3300002774 Bacteria 101822
9 JGI25151J46595_10000129 3300003187 Bacteria 101822
10 JGI25165J46597_1000855 3300003214 Bacteria 22032
11 JGI25153J46596_10000096 3300003215 Bacteria 101822
12 rootH1_10030248 3300003316 Bacteria 14771
13 rootH1_10077291 3300003316 Bacteria 13436
14 rootH2_10001334 3300003320 Bacteria 238709
15 rootH2_10030514 3300003320 Bacteria 37510
16 rootH2_10086988 3300003320 Bacteria 2427
17 rootH1_10002772 3300003323 Bacteria 26216
18 rootH1_10031969 3300003323 Bacteria 4563
19 Ga0055536_1000003 3300003781 Bacteria 447744
20 Ga0055530_10002620 3300003791 Bacteria 11315
21 Ga0065714_10002192 3300005288 Bacteria 92967
22 Ga0065714_10002259 3300005288 Bacteria 36733
23 Ga0065714_10002329 3300005288 Bacteria 24237
24 Ga0065714_10007352 3300005288 Bacteria 3199
25 Ga0065714_10066492 3300005288 Bacteria 6756
26 Ga0065714_10076832 3300005288 Bacteria 2749
27 Ga0065704_10000199 3300005289 Bacteria 297176
28 Ga0070658_10000026 3300005327 Bacteria 171716
29 Ga0070658_10052682 3300005327 Bacteria 3301
30 Ga0070680_100035963 3300005336 Bacteria 4000
31 Ga0068868_100013289 3300005338 Bacteria 6034
32 Ga0068868_100069406 3300005338 Bacteria 2808
33 Ga0070660_100022256 3300005339 Bacteria 4685
34 Ga0070671_100062572 3300005355 Unclassified 3098
35 Ga0070659_100000733 3300005366 Bacteria 23815
36 Ga0070659_100001687 3300005366 Bacteria 15889
37 Ga0070663_100029600 3300005455 Bacteria 3744
38 Ga0070678_100014280 3300005456 Bacteria 5005
39 Ga0070662_100000093 3300005457 Bacteria 49418
40 Ga0070684_100028266 3300005535 Bacteria 4743
41 Ga0070665_100000003 3300005548 Bacteria 811857
42 Ga0068855_100000727 3300005563 Bacteria 40453
43 Ga0068855_100003182 3300005563 Bacteria 20104
44 Ga0068855_100251749 3300005563 Bacteria 1970
45 Ga0068857_100008147 3300005577 Bacteria 9048
46 Ga0068856_100001155 3300005614 Bacteria 27745
47 Ga0068856_100109665 3300005614 Bacteria 2756
48 Ga0075366_10002893 3300006195 Bacteria 8913
49 Ga0075366_10010521 3300006195 Bacteria 5194
50 Ga0097621_100000191 3300006237 Bacteria 39497
51 Ga0068871_100014574 3300006358 Bacteria 5863
52 Ga0068865_100000022 3300006881 Bacteria 102976
53 Ga0105240_10000010 3300009093 Bacteria 537830
54 Ga0105240_10003724 3300009093 Bacteria 23554
55 Ga0105240_10064430 3300009093 Bacteria 4554
56 Ga0105240_10331441 3300009093 Bacteria 1732
57 Ga0105243_10000007 3300009148 Bacteria 445042
58 Ga0105241_10067733 3300009174 Bacteria 2764
59 Ga0105237_10000227 3300009545 Bacteria 79785
60 Ga0105237_10002740 3300009545 Bacteria 21484
61 Ga0105237_10005570 3300009545 Bacteria 14203
62 Ga0105237_10028330 3300009545 Bacteria 5707
63 Ga0105237_10028484 3300009545 Bacteria 5689
64 Ga0105237_10034526 3300009545 Bacteria 5120
65 Ga0105239_10000005 3300010375 Bacteria 496066
66 Ga0105239_10000013 3300010375 Bacteria 327371
67 Ga0105239_10000038 3300010375 Bacteria 205230
68 Ga0105239_10001655 3300010375 Bacteria 29379
69 Ga0105239_10002474 3300010375 Bacteria 23547
70 Ga0105239_10040659 3300010375 Bacteria 5095
71 Ga0105239_10348375 3300010375 Bacteria 1672
72 Ga0157373_10000013 3300013100 Bacteria 186870
73 Ga0157373_10000015 3300013100 Bacteria 183381
74 Ga0157373_10001334 3300013100 Bacteria 18896
75 Ga0157373_10008767 3300013100 Bacteria 7494
76 Ga0157373_10060090 3300013100 Bacteria 2693
77 Ga0157371_10000009 3300013102 Bacteria 392895
78 Ga0157371_10000529 3300013102 Bacteria 45499
79 Ga0157371_10001650 3300013102 Bacteria 22754
80 Ga0157371_10006640 3300013102 Bacteria 9479
81 Ga0157371_10065818 3300013102 Bacteria 2566
82 Ga0157370_10001996 3300013104 Bacteria 25074
83 Ga0157370_10016333 3300013104 Bacteria 7518
84 Ga0157370_10063434 3300013104 Bacteria 3501
85 Ga0157369_10000006 3300013105 Bacteria 412230
86 Ga0157369_10001106 3300013105 Bacteria 33739
87 Ga0157369_10168025 3300013105 Bacteria 2312
88 Ga0157369_10254752 3300013105 Bacteria 1831
89 Ga0157374_10000456 3300013296 Bacteria 37266
90 Ga0157374_10103055 3300013296 Bacteria 2738
91 Ga0157378_10003085 3300013297 Bacteria 14806
92 Ga0163162_10000304 3300013306 Bacteria 45418
93 Ga0163162_10000535 3300013306 Bacteria 35127
94 Ga0163162_10009874 3300013306 Bacteria 9284
95 Ga0163162_10037342 3300013306 Bacteria 4847
96 Ga0157372_10000010 3300013307 Bacteria 300658
97 Ga0157372_10005632 3300013307 Bacteria 13317
98 Ga0157372_10005688 3300013307 Bacteria 13266
99 Ga0157372_10010567 3300013307 Bacteria 9819
100 Ga0157372_10036310 3300013307 Bacteria 5431
101 Ga0157372_10041263 3300013307 Bacteria 5101
102 Ga0157375_10013033 3300013308 Bacteria 7388
103 Ga0182008_10000001 3300014497 Bacteria 540790
104 Ga0182008_10000435 3300014497 Bacteria 31749
105 Ga0182008_10000726 3300014497 Bacteria 23436
106 Ga0157376_10209384 3300014969 Bacteria 1799
107 Ga0182006_1000113 3300015261 Bacteria 86691
108 Ga0182006_1000321 3300015261 Bacteria 41748
109 Ga0182006_1001671 3300015261 Bacteria 13044
110 Ga0182007_10000122 3300015262 Bacteria 54069
111 Ga0183373_1006 3300015682 Bacteria 328276
112 Ga0163161_10001430 3300017792 Bacteria 17601
113 Ga0163161_10003423 3300017792 Bacteria 11124
114 Ga0163161_10003996 3300017792 Bacteria 10323
115 Ga0163161_10006025 3300017792 Bacteria 8402
116 Ga0163161_10078428 3300017792 Bacteria 2427
117 Ga0213872_10004022 3300021361 Bacteria 7933
118 Ga0209563_103548 3300025230 Bacteria 3191
119 Ga0207427_100106 3300025231 Bacteria 117041
120 Ga0209437_100070 3300025233 Bacteria 306718
121 Ga0209437_100226 3300025233 Bacteria 100303
122 Ga0207425_1000004 3300025245 Bacteria 1092421
123 Ga0209026_1000238 3300025250 Bacteria 71772
124 Ga0209026_1001835 3300025250 Bacteria 8712
125 Ga0209026_1007313 3300025250 Bacteria 2513
126 Ga0209129_1000314 3300025258 Bacteria 43196
127 Ga0209233_1000089 3300025261 Bacteria 316381
128 Ga0209233_1000901 3300025261 Bacteria 12988
129 Ga0209676_1000001 3300025292 Bacteria 1852142
130 Ga0209025_1000009 3300025294 Bacteria 1092561
131 Ga0209758_1000010 3300025297 Bacteria 1092782
132 Ga0209050_1000016 3300025298 Bacteria 729149
133 Ga0207647_10000354 3300025904 Bacteria 37206
134 Ga0207647_10000473 3300025904 Bacteria 32482
135 Ga0207645_10000500 3300025907 Bacteria 32432
136 Ga0207705_10000040 3300025909 Bacteria 185735
137 Ga0207695_10000019 3300025913 Bacteria 732137
138 Ga0207695_10006804 3300025913 Bacteria 14735
139 Ga0207695_10249898 3300025913 Bacteria 1673
140 Ga0207671_10000515 3300025914 Bacteria 52421
141 Ga0207671_10003333 3300025914 Bacteria 16132
142 Ga0207671_10005371 3300025914 Bacteria 11838
143 Ga0207671_10030013 3300025914 Bacteria 4056
144 Ga0207660_10016972 3300025917 Bacteria 4830
145 Ga0207690_10000598 3300025932 Bacteria 23385
146 Ga0207706_10000442 3300025933 Bacteria 44334
147 Ga0207709_10000033 3300025935 Bacteria 320483
148 Ga0207704_10000011 3300025938 Bacteria 180140
149 Ga0207667_10000020 3300025949 Bacteria 374770
150 Ga0207667_10034731 3300025949 Bacteria 5412
151 Ga0207667_10214241 3300025949 Bacteria 1974
152 Ga0207677_10049501 3300026023 Bacteria 2836
153 Ga0207677_10115792 3300026023 Bacteria 2006
154 Ga0207639_10097141 3300026041 Bacteria 2371
155 Ga0207702_10001532 3300026078 Bacteria 22854
156 Ga0207702_10005183 3300026078 Bacteria 11457
157 Ga0207702_10094087 3300026078 Bacteria 2630
158 Ga0207674_10017691 3300026116 Bacteria 7768
159 Ga0207698_10104388 3300026142 Bacteria 2358
160 Ga0307517_10001632 3300028786 Bacteria 37097
161 Ga0307515_10002577 3300028794 Bacteria 39123
162 Ga0307515_10005660 3300028794 Bacteria 25234
163 Ga0265338_10051412 3300028800 Bacteria 3710
164 Ga0316177_1166668 3300030731 Bacteria 18921
165 Ga0316176_1026645 3300030732 Bacteria 30132
166 Ga0316183_1061567 3300030742 Bacteria 42572
167 Ga0316181_1055578 3300030744 Bacteria 43804
168 Ga0265330_10034360 3300031235 Bacteria 2265
169 Ga0307509_10133753 3300031507 Bacteria 2429
170 Ga0307408_100000868 3300031548 Bacteria 23720
171 Ga0307408_100001267 3300031548 Bacteria 18967
172 Ga0307408_100008714 3300031548 Bacteria 6700
173 Ga0307405_10000028 3300031731 Bacteria 117832
174 Ga0307407_10000015 3300031903 Bacteria 143258
175 Ga0307412_10000017 3300031911 Bacteria 294698
176 Ga0307412_10009447 3300031911 Bacteria 5597
177 Ga0307416_100000025 3300032002 Bacteria 178154
178 Ga0307414_10000098 3300032004 Bacteria 64784
179 Ga0307414_10011739 3300032004 Bacteria 5152
180 Ga0307414_10013819 3300032004 Bacteria 4818
181 Ga0307414_10017599 3300032004 Bacteria 4377
182 Ga0307414_10021021 3300032004 Bacteria 4083
183 Ga0307414_10021324 3300032004 Bacteria 4062
184 Ga0307414_10201033 3300032004 Bacteria 1621
185 Ga0307507_10000023 3300033179 Bacteria 212423
186 Ga0307510_10008251 3300033180 Bacteria 12411
187 Ga0316584_0059861 3300036712 Bacteria 2852
188 Ga0395899_0000002 3300037312 Bacteria 1324310
189 Ga0395899_0000717 3300037312 Bacteria 33215
190 Ga0395899_0001366 3300037312 Bacteria 20911
191 Ga0395900_0000014 3300037418 Bacteria 386513
192 Ga0395900_0000517 3300037418 Bacteria 54614
193 Ga0395900_0048837 3300037418 Bacteria 4358
194 Ga0395900_0141955 3300037418 Unclassified 2459
195 Ga0395898_0033299 3300037466 Bacteria 5144
196 Ga0395905_0000037 3300037471 Bacteria 261808
197 Ga0395905_0001611 3300037471 Bacteria 26826
198 Ga0395901_0000219 3300038443 Bacteria 71884
199 Ga0395901_0013804 3300038443 Bacteria 8215
200 Ga0395901_0117916 3300038443 Bacteria 2789
201 Ga0436361_1129763 3300039447 Bacteria 18584
202 Ga0451577_0000949 3300042876 Bacteria 42547
203 Ga0466966_0066429 3300044684 Bacteria 2266
204 Ga0453684_0000238 3300044712 Bacteria 236003
205 Ga0453684_0001293 3300044712 Bacteria 74352
206 Ga0453684_0014102 3300044712 Bacteria 12851
207 Ga0453684_0044133 3300044712 Bacteria 5974
208 Ga0451576_0010151 3300045051 Bacteria 10835
209 Ga0495650_0000025 3300046471 Bacteria 486001
210 Ga0495650_0027352 3300046471 Bacteria 2637
211 Ga0495585_0000290 3300046492 Bacteria 50496
212 Ga0495585_0004910 3300046492 Bacteria 8558
213 Ga0495606_0000035 3300046507 Bacteria 243820
214 Ga0495606_0042700 3300046507 Bacteria 3030
215 Ga0495610_0000350 3300046512 Bacteria 48523
216 Ga0495610_0001059 3300046512 Bacteria 25284
217 Ga0495610_0003686 3300046512 Bacteria 11764
218 Ga0495616_0004199 3300046513 Bacteria 9130
219 Ga0495616_0017160 3300046513 Bacteria 3994
220 Ga0495644_0030977 3300046523 Bacteria 2020
221 Ga0495648_0001909 3300046524 Bacteria 19896
222 Ga0495648_0029780 3300046524 Bacteria 3618
223 Ga0495648_0113578 3300046524 Bacteria 1468
224 Ga0495652_0032753 3300046529 Bacteria 4543
225 Ga0495609_0004655 3300046538 Bacteria 7439
226 Ga0495609_0043748 3300046538 Bacteria 2010
227 Ga0495633_0000302 3300046558 Bacteria 56283
228 Ga0495668_0000134 3300046616 Bacteria 112135
229 Ga0495625_0002048 3300046660 Bacteria 22650
230 Ga0495625_0003206 3300046660 Bacteria 16614
231 Ga0495625_0006653 3300046660 Bacteria 10252
232 Ga0495625_0054411 3300046660 Bacteria 2859
233 Ga0495625_0123839 3300046660 Bacteria 1756
234 Ga0495661_0001362 3300046665 Bacteria 20651
235 Ga0495649_0000006 3300046694 Bacteria 542188
236 Ga0495683_0047929 3300047323 Bacteria 2143
237 Ga0495687_002598 3300047443 Bacteria 14201
238 Ga0495687_012738 3300047443 Bacteria 4430
239 Ga0495684_0221764 3300047471 Bacteria 1386
240 Ga0495686_0000420 3300047472 Bacteria 66708
241 Ga0495686_0003055 3300047472 Bacteria 14837
242 Ga0495686_0044810 3300047472 Bacteria 2800
243 Ga0495686_0066555 3300047472 Bacteria 2226
244 Ga0495686_0098143 3300047472 Bacteria 1770
245 Ga0496116_0005710 3300048919 Bacteria 11446
246 Ga0496117_0008943 3300048920 Bacteria 9431
247 Ga0496122_0006161 3300048925 Bacteria 13945
248 Ga0496123_0002415 3300048926 Bacteria 23304
249 Ga0496123_0035938 3300048926 Bacteria 3522
250 Ga0501031_0000114 3300049568 Bacteria 43188
251 Ga0501032_0003390 3300049569 Bacteria 12210
252 Ga0501033_0004809 3300049570 Bacteria 10788
253 Ga0501037_0137279 3300049573 Bacteria 1751
254 Ga0501040_0089444 3300049576 Bacteria 2139
255 Ga0501241_000271 3300049758 Bacteria 11462
256 Ga0501035_0001599 3300049822 Bacteria 22935
257 Ga0501044_0001468 3300049823 Bacteria 27685
258 nmdc:mga0k408_1737_c1 3300050493 Bacteria 11683
259 Ga0500635_0001988 3300053080 Bacteria 4993
260 Ga0500651_0023456 3300053093 Bacteria 3864
261 Ga0500608_001595 3300053122 Bacteria 8151
262 Ga0500618_000006 3300053125 Bacteria 239188
263 Ga0500622_0001444 3300053156 Bacteria 19041
264 Ga0500624_001282 3300053157 Bacteria 4351
265 2599480285 2599185184 Bacteria 6430550
266 2586209446 2585427687 Bacteria 5544917
267 2722727767 2721755487 Bacteria 6357185
268 2738756536 2738541283 Bacteria 7222293
269 2738763978 2738541284 Bacteria 5199923
270 2738856025 2738541302 Bacteria 5944758
271 2739300956 2738543023 Bacteria 6767879
272 2739591051 2739367651 Bacteria 6359826
273 2739615578 2739367656 Bacteria 5152243
274 2739647663 2739367663 Bacteria 5040914
275 2776613557 2775506987 Bacteria 5373360
276 2819549965 2818991437 Bacteria 5805520
277 2842723431 2842722452 Bacteria 6263924
278 2842904232 2842903701 Bacteria 6986368
279 2842909926 2842909656 Bacteria 6185908
280 2849284783 2849281842 Bacteria 6065644
281 2852623332 2852623160 Bacteria 4376875
282 2852628510 2852627209 Bacteria 5896285
283 2857628799 2857627736 Bacteria 5625397
284 2884635092 2884634485 Bacteria 3928637
285 2884937790 2884933994 Bacteria 4535041
286 2890739443 2890737413 Bacteria 4269751
287 2896318082 2896317667 Bacteria 4606601
288 2896344446 2896344016 Bacteria 3811746
289 2898714807 2898713307 Bacteria 4110805
290 2902052462 2902048731 Bacteria 4976191
291 2904445972 2904445276 Bacteria 5310396
292 2904781554 2904780799 Bacteria 5840761
293 2919177735 2919177583 Bacteria 5641607
294 2919186903 2919186247 Bacteria 6244071
295 2919438558 2919437846 Bacteria 6199444
296 2919695279 2919692658 Bacteria 5943958
297 2928083438 2928078545 Bacteria 6534839
298 2928151298 2928147474 Bacteria 6512076
299 2932084599 2932082852 Bacteria 6563563
300 2939665828 2939664404 Bacteria 6364494
301 2946000271 2945997725 Bacteria 6404843
302 2954017153 2954016120 Bacteria 6446024
303 2977236117 2977232053 Bacteria 5485925
304 3003236776 3003233435 Bacteria 4458031
305 8055590512 8055588893 Bacteria 3619545
306 SwRhRL2b_contig_2418591
307 JGI24737J22298_10000757
308 JGI24735J21928_10000013
309 JGI24735J21928_10002913
310 JGI25162J39368_1000223
311 JGI25162J39368_1001969
312 JGI25152J39213_1000635
313 JGI25150J39212_1000030
314 JGI25151J46595_10000129
315 JGI25165J46597_1000855
316 JGI25153J46596_10000096
317 rootH1_10030248
318 rootH1_10077291
319 rootH2_10001334
320 rootH2_10030514
321 rootH2_10086988
322 rootH1_10002772
323 rootH1_10031969
324 Ga0055536_1000003
325 Ga0055530_10002620
326 Ga0065714_10002192
327 Ga0065714_10002259
328 Ga0065714_10002329
329 Ga0065714_10007352
330 Ga0065714_10066492
331 Ga0065714_10076832
332 Ga0065704_10000199
333 Ga0070658_10000026
334 Ga0070658_10052682
335 Ga0070680_100035963
336 Ga0068868_100013289
337 Ga0068868_100069406
338 Ga0070660_100022256
339 Ga0070671_100062572
340 Ga0070659_100000733
341 Ga0070659_100001687
342 Ga0070663_100029600
343 Ga0070678_100014280
344 Ga0070662_100000093
345 Ga0070684_100028266
346 Ga0070665_100000003
347 Ga0068855_100000727
348 Ga0068855_100003182
349 Ga0068855_100251749
350 Ga0068857_100008147
351 Ga0068856_100001155
352 Ga0068856_100109665
353 Ga0075366_10002893
354 Ga0075366_10010521
355 Ga0097621_100000191
356 Ga0068871_100014574
357 Ga0068865_100000022
358 Ga0105240_10000010
359 Ga0105240_10003724
360 Ga0105240_10064430
361 Ga0105240_10331441
362 Ga0105243_10000007
363 Ga0105241_10067733
364 Ga0105237_10000227
365 Ga0105237_10002740
366 Ga0105237_10005570
367 Ga0105237_10028330
368 Ga0105237_10028484
369 Ga0105237_10034526
370 Ga0105239_10000005
371 Ga0105239_10000013
372 Ga0105239_10000038
373 Ga0105239_10001655
374 Ga0105239_10002474
375 Ga0105239_10040659
376 Ga0105239_10348375
377 Ga0157373_10000013
378 Ga0157373_10000015
379 Ga0157373_10001334
380 Ga0157373_10008767
381 Ga0157373_10060090
382 Ga0157371_10000009
383 Ga0157371_10000529
384 Ga0157371_10001650
385 Ga0157371_10006640
386 Ga0157371_10065818
387 Ga0157370_10001996
388 Ga0157370_10016333
389 Ga0157370_10063434
390 Ga0157369_10000006
391 Ga0157369_10001106
392 Ga0157369_10168025
393 Ga0157369_10254752
394 Ga0157374_10000456
395 Ga0157374_10103055
396 Ga0157378_10003085
397 Ga0163162_10000304
398 Ga0163162_10000535
399 Ga0163162_10009874
400 Ga0163162_10037342
401 Ga0157372_10000010
402 Ga0157372_10005632
403 Ga0157372_10005688
404 Ga0157372_10010567
405 Ga0157372_10036310
406 Ga0157372_10041263
407 Ga0157375_10013033
408 Ga0182008_10000001
409 Ga0182008_10000435
410 Ga0182008_10000726
411 Ga0157376_10209384
412 Ga0182006_1000113
413 Ga0182006_1000321
414 Ga0182006_1001671
415 Ga0182007_10000122
416 Ga0183373_1006
417 Ga0163161_10001430
418 Ga0163161_10003423
419 Ga0163161_10003996
420 Ga0163161_10006025
421 Ga0163161_10078428
422 Ga0213872_10004022
423 Ga0209563_103548
424 Ga0207427_100106
425 Ga0209437_100070
426 Ga0209437_100226
427 Ga0207425_1000004
428 Ga0209026_1000238
429 Ga0209026_1001835
430 Ga0209026_1007313
431 Ga0209129_1000314
432 Ga0209233_1000089
433 Ga0209233_1000901
434 Ga0209676_1000001
435 Ga0209025_1000009
436 Ga0209758_1000010
437 Ga0209050_1000016
438 Ga0207647_10000354
439 Ga0207647_10000473
440 Ga0207645_10000500
441 Ga0207705_10000040
442 Ga0207695_10000019
443 Ga0207695_10006804
444 Ga0207695_10249898
445 Ga0207671_10000515
446 Ga0207671_10003333
447 Ga0207671_10005371
448 Ga0207671_10030013
449 Ga0207660_10016972
450 Ga0207690_10000598
451 Ga0207706_10000442
452 Ga0207709_10000033
453 Ga0207704_10000011
454 Ga0207667_10000020
455 Ga0207667_10034731
456 Ga0207667_10214241
457 Ga0207677_10049501
458 Ga0207677_10115792
459 Ga0207639_10097141
460 Ga0207702_10001532
461 Ga0207702_10005183
462 Ga0207702_10094087
463 Ga0207674_10017691
464 Ga0207698_10104388
465 Ga0307517_10001632
466 Ga0307515_10002577
467 Ga0307515_10005660
468 Ga0265338_10051412
469 Ga0316177_1166668
470 Ga0316176_1026645
471 Ga0316183_1061567
472 Ga0316181_1055578
473 Ga0265330_10034360
474 Ga0307509_10133753
475 Ga0307408_100000868
476 Ga0307408_100001267
477 Ga0307408_100008714
478 Ga0307405_10000028
479 Ga0307407_10000015
480 Ga0307412_10000017
481 Ga0307412_10009447
482 Ga0307416_100000025
483 Ga0307414_10000098
484 Ga0307414_10011739
485 Ga0307414_10013819
486 Ga0307414_10017599
487 Ga0307414_10021021
488 Ga0307414_10021324
489 Ga0307414_10201033
490 Ga0307507_10000023
491 Ga0307510_10008251
492 Ga0316584_0059861
493 Ga0395899_0000002
494 Ga0395899_0000717
495 Ga0395899_0001366
496 Ga0395900_0000014
497 Ga0395900_0000517
498 Ga0395900_0048837
499 Ga0395900_0141955
500 Ga0395898_0033299
501 Ga0395905_0000037
502 Ga0395905_0001611
503 Ga0395901_0000219
504 Ga0395901_0013804
505 Ga0395901_0117916
506 Ga0436361_1129763
507 Ga0451577_0000949
508 Ga0466966_0066429
509 Ga0453684_0000238
510 Ga0453684_0001293
511 Ga0453684_0014102
512 Ga0453684_0044133
513 Ga0451576_0010151
514 Ga0495650_0000025
515 Ga0495650_0027352
516 Ga0495585_0000290
517 Ga0495585_0004910
518 Ga0495606_0000035
519 Ga0495606_0042700
520 Ga0495610_0000350
521 Ga0495610_0001059
522 Ga0495610_0003686
523 Ga0495616_0004199
524 Ga0495616_0017160
525 Ga0495644_0030977
526 Ga0495648_0001909
527 Ga0495648_0029780
528 Ga0495648_0113578
529 Ga0495652_0032753
530 Ga0495609_0004655
531 Ga0495609_0043748
532 Ga0495633_0000302
533 Ga0495668_0000134
534 Ga0495625_0002048
535 Ga0495625_0003206
536 Ga0495625_0006653
537 Ga0495625_0054411
538 Ga0495625_0123839
539 Ga0495661_0001362
540 Ga0495649_0000006
541 Ga0495683_0047929
542 Ga0495687_002598
543 Ga0495687_012738
544 Ga0495684_0221764
545 Ga0495686_0000420
546 Ga0495686_0003055
547 Ga0495686_0044810
548 Ga0495686_0066555
549 Ga0495686_0098143
550 Ga0496116_0005710
551 Ga0496117_0008943
552 Ga0496122_0006161
553 Ga0496123_0002415
554 Ga0496123_0035938
555 Ga0501031_0000114
556 Ga0501032_0003390
557 Ga0501033_0004809
558 Ga0501037_0137279
559 Ga0501040_0089444
560 Ga0501241_000271
561 Ga0501035_0001599
562 Ga0501044_0001468
563 nmdc:mga0k408_1737_c1
564 Ga0500635_0001988
565 Ga0500651_0023456
566 Ga0500608_001595
567 Ga0500618_000006
568 Ga0500622_0001444
569 Ga0500624_001282
570 2599480285
571 2586209446
572 2722727767
573 2738756536
574 2738763978
575 2738856025
576 2739300956
577 2739591051
578 2739615578
579 2739647663
580 2776613557
581 2819549965
582 2842723431
583 2842904232
584 2842909926
585 2849284783
586 2852623332
587 2852628510
588 2857628799
589 2884635092
590 2884937790
591 2890739443
592 2896318082
593 2896344446
594 2898714807
595 2902052462
596 2904445972
597 2904781554
598 2919177735
599 2919186903
600 2919438558
601 2919695279
602 2928083438
603 2928151298
604 2932084599
605 2939665828
606 2946000271
607 2954017153
608 2977236117
609 3003236776
610 8055590512

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10396

TrmE_N

GTP-binding protein TrmE N-terminus

3

119

0.96

PF12631

MnmE_helical

MnmE helical domain

122

480

0.95

PF01926

MMR_HSR1

50S ribosome-binding GTPase

217

332

0.88

PF02421

FeoB_N

Ferrous iron transport protein B

216

349

0.81

PF00025

Arf

ADP-ribosylation factor family

203

354

0.74

PF00071

Ras

Ras family

217

361

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xzq-assembly1.cif.gz_B structure of the gtp-binding protein trme from thermotoga maritima complexed with 5-formyl-thf 0.9587 5 121
1xzp-assembly1.cif.gz_B structure of the gtp-binding protein trme from thermotoga maritima 0.9586 5 123
1xzq-assembly1.cif.gz_B structure of the gtp-binding protein trme from thermotoga maritima complexed with 5-formyl-thf 0.9349 5 121
1xzp-assembly1.cif.gz_B structure of the gtp-binding protein trme from thermotoga maritima 0.8521 5 123
3gei-assembly2.cif.gz_C crystal structure of mnme from chlorobium tepidum in complex with gcp 0.8324 1 456
ID Description Score Start End Superfamily
af_Q2FUQ2_1_124_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9862 3 121 3.30.1360.120
3geiB01 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.976 5 121 3.30.1360.120
1xzqB00 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9587 5 121 3.30.1360.120
af_Q2FUQ2_1_124_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9392 3 121 3.30.1360.120
1xzqB00 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9349 5 121 3.30.1360.120
ID Description Score Start End GO Terms
AF-Q8RQF8-F1-model_v4 Thiopen and furan oxidase homolog 0.9896 5 139 GO:0002098
GO:0005525
GO:0005829
GO:0030488
AF-A0A520D8S8-F1-model_v4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.9861 1 107 GO:0002098
GO:0005525
GO:0005829
GO:0030488
AF-A0A3B8S991-F1-model_v4 deleted 0.9837 5 95
AF-A0A353TV26-F1-model_v4 deleted 0.9834 3 152
AF-A0A7C0YDF7-F1-model_v4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.9812 4 146 GO:0002098
GO:0005525
GO:0005829
GO:0030488

Map