F399490

General Info

Members Datasets Scaffolds Average Seq Length
308 238 252 336

Family's Representative Sequence

Representative Sequence 3300003187|JGI25151J46595_10000045|JGI25151J46595_1000004595
Length 378
Sequence MATIPASSCRPMPPGNKPVAAMAAMTAPRVTVLGAGSWGTALAAVAARRHPTMLWARQAEQAENIAAARENARYLPGVSLPATLAVTADLAQALRHLDAPANQADAEPLIVLGVPVAGLADICQALLALLPTLSGPLPHIVWTCKGFEKHDGRLPHEIVRDALAGLPGIRLGVLSGPSFAREVAQGLPVGLTIASADDAVCRRTTAALHGGAVRVYAGDDVVGVEVGGALKNIIAIACGVSDGLMLGTNARAALITRGLAEMTRLGVALGARPDTFAGLTGLGDLVLTATGDLSRNRRVGLEIGAGRKLDDILAGGMTAEGAHAARAALARARALNVDLPITEAVCAVLFDGVAPMTAVSTLLARDARHEGGDLRAPD

Samples

Sample ID Description Type Environment
1 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
2 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
3 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
4 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
5 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
6 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
7 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
8 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
9 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
10 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
11 2600255067 Paraburkholderia kururiensis thiooxydans NBRC 107107 Isolate Unclassified
12 2643221731 Bacillus sp. Root147 Isolate Unclassified
13 2643221732 Bacillus sp. Root239 Isolate Unclassified
14 2721755763 Pandoraea thiooxydans ATSB16 Isolate Rhizosphere
15 2738543017 Bacillus sp. OV186 Isolate Unclassified
16 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
17 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
18 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
19 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
20 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
21 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
22 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
23 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
24 2842882022 Bacillus sp. R-71893 Isolate Unclassified
25 2855730933 Achromobacter sp. HZ28 Isolate Nodule
26 2855767633 Achromobacter sp. HZ34 Isolate Nodule
27 2856287931 Paraburkholderia bannensis BE22 Isolate Rhizosphere
28 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
29 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
30 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
31 2857586860 Bacillus sp. R-71935 Isolate Unclassified
32 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
33 2881927736 Candidimonas sp. SYP-B2681 Isolate Rhizosphere
34 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
35 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
36 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
37 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
38 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
39 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
40 2919720352 Priestia megaterium 4340 Isolate Unclassified
41 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
42 2929004312 Priestia megaterium 1104 Isolate Unclassified
43 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
44 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
45 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
46 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
47 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
48 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
49 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
50 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
51 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
52 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
53 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
54 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
55 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
56 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
57 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
58 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
59 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
60 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
61 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
62 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
63 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
64 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
65 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
66 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
67 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
68 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
69 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
70 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
71 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
72 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
73 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
74 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
75 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
76 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
77 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
78 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
79 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
80 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
81 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
82 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
83 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
84 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
85 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
86 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
87 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
88 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
89 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
90 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
91 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
92 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
93 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
94 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
95 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
96 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
97 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
98 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
99 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
100 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
101 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
102 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
103 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
104 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
105 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
111 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
139 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
140 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
141 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
142 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
143 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
144 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
145 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
146 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
147 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
148 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
149 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
150 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
151 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
152 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
153 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
154 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
155 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
156 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
157 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
158 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
159 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
160 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
161 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
162 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
163 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
164 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
165 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
166 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
167 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
168 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
169 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
170 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
171 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
172 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
173 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
174 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
175 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
176 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
177 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
178 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
179 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
180 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
181 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
182 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
183 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
184 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
185 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
186 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
187 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
188 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
189 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
190 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
191 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
192 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
193 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
194 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
195 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
196 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
197 3300049540 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
198 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
199 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
200 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
201 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
202 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
203 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
204 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
205 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
206 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
207 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
208 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
209 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
210 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
211 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
212 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
213 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
214 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
215 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
216 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
217 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
218 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
219 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
220 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
221 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
222 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
223 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
224 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
225 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
226 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
227 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
228 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
229 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
230 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere
231 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
232 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
233 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
234 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
235 8048746797 Alcaligenes endophyticus DSM 100498 Isolate Unclassified
236 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere
237 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere
238 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.25
Metatranscriptomes 3.25
Isolates 18.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.94
Nodule 1.62
Rhizoplane 5.84
Rhizosphere 59.42
Stem 0
Stem Tuber 0
Unclassified 18.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10001797 3300001990 Bacteria 7680
2 JGI25151J46595_10000045 3300003187 Bacteria 169207
3 JGI25151J46595_10001503 3300003187 Bacteria 15649
4 JGI25151J46595_10006445 3300003187 Bacteria 5902
5 JGI25151J46595_10010608 3300003187 Bacteria 4270
6 JGI25151J46595_10010640 3300003187 Bacteria 4261
7 JGI25151J46595_10012021 3300003187 Bacteria 3951
8 rootH1_10007388 3300003316 Bacteria 18072
9 rootH1_10007388 3300003323 Bacteria 2766
10 rootH2_10318840 3300003320 Bacteria 3585
11 rootL2_10011855 3300003322 Bacteria 17608
12 Ga0006562J51391_1001554 3300003578 Bacteria 6750
13 Ga0055538_1000287 3300003751 Bacteria 25664
14 Ga0055532_1000079 3300003758 Bacteria 121008
15 Ga0055532_1002251 3300003758 Bacteria 4207
16 Ga0055528_1001271 3300003790 Bacteria 15888
17 Ga0070683_100176648 3300005329 Unclassified 2027
18 Ga0070670_100127266 3300005331 Bacteria 2199
19 Ga0070666_10130858 3300005335 Bacteria 1743
20 Ga0068868_100331180 3300005338 Bacteria 1300
21 Ga0070689_100006696 3300005340 Bacteria 8008
22 Ga0070669_100010935 3300005353 Bacteria 6445
23 Ga0070671_100007284 3300005355 Bacteria 8839
24 Ga0070673_100075858 3300005364 Bacteria 2713
25 Ga0070709_10324327 3300005434 Bacteria 1131
26 Ga0070714_100000082 3300005435 Bacteria 82377
27 Ga0070708_100043909 3300005445 Bacteria 3929
28 Ga0070663_100024843 3300005455 Bacteria 4038
29 Ga0070678_100153710 3300005456 Bacteria 1856
30 Ga0070685_10000451 3300005466 Bacteria 23864
31 Ga0070706_100032165 3300005467 Bacteria 4839
32 Ga0070707_100045297 3300005468 Bacteria 4211
33 Ga0070707_100077390 3300005468 Bacteria 3210
34 Ga0070707_100404940 3300005468 Unclassified 1324
35 Ga0070698_100009801 3300005471 Bacteria 10239
36 Ga0068853_100006895 3300005539 Bacteria 9069
37 Ga0070672_100122574 3300005543 Bacteria 2129
38 Ga0068855_100000182 3300005563 Bacteria 80758
39 Ga0068856_100374204 3300005614 Bacteria 1443
40 Ga0068859_100291820 3300005617 Bacteria 1724
41 Ga0068859_100347549 3300005617 Bacteria 1578
42 Ga0068863_100004361 3300005841 Bacteria 13946
43 Ga0070717_10001067 3300006028 Bacteria 18407
44 Ga0070717_10088595 3300006028 Bacteria 2609
45 Ga0075364_10001457 3300006051 Bacteria 12846
46 Ga0075364_10017875 3300006051 Bacteria 4434
47 Ga0075364_10022258 3300006051 Bacteria 4000
48 Ga0075367_10082964 3300006178 Bacteria 1941
49 Ga0075366_10043486 3300006195 Bacteria 2661
50 Ga0075366_10110020 3300006195 Bacteria 1657
51 Ga0075428_100049213 3300006844 Bacteria 4624
52 Ga0075428_100226363 3300006844 Bacteria 2019
53 Ga0075430_100000341 3300006846 Bacteria 33734
54 Ga0075431_100014404 3300006847 Bacteria 7998
55 Ga0097620_100291787 3300006931 Bacteria 1724
56 Ga0097620_100347536 3300006931 Bacteria 1578
57 Ga0105240_10000906 3300009093 Bacteria 52979
58 Ga0105240_10082727 3300009093 Bacteria 3942
59 Ga0111539_10021043 3300009094 Bacteria 8033
60 Ga0111539_10149886 3300009094 Bacteria 2730
61 Ga0105245_10033137 3300009098 Bacteria 4577
62 Ga0105247_10003391 3300009101 Bacteria 10417
63 Ga0105247_10072497 3300009101 Bacteria 2156
64 Ga0114129_10005676 3300009147 Bacteria 17663
65 Ga0114129_10008079 3300009147 Bacteria 14992
66 Ga0114129_10028163 3300009147 Bacteria 7960
67 Ga0114129_10038596 3300009147 Bacteria 6736
68 Ga0114129_10053054 3300009147 Bacteria 5687
69 Ga0105243_10001152 3300009148 Bacteria 23970
70 Ga0105242_10026337 3300009176 Bacteria 4608
71 Ga0105248_10036321 3300009177 Bacteria 5510
72 Ga0105238_10012867 3300009551 Bacteria 8444
73 Ga0105239_10182570 3300010375 Bacteria 2347
74 Ga0105246_10008508 3300011119 Bacteria 6308
75 Ga0157378_10003912 3300013297 Bacteria 13199
76 Ga0163162_10000028 3300013306 Bacteria 175501
77 Ga0157375_10401814 3300013308 Bacteria 1537
78 Ga0157377_10000698 3300014745 Bacteria 13826
79 Ga0163161_10208466 3300017792 Bacteria 1509
80 Ga0213874_10002647 3300021377 Bacteria 3885
81 Ga0209784_100031 3300025224 Bacteria 318854
82 Ga0209147_100014 3300025229 Bacteria 597841
83 Ga0209147_100737 3300025229 Bacteria 16231
84 Ga0209258_106256 3300025242 Bacteria 1891
85 Ga0209455_1000820 3300025272 Bacteria 16895
86 Ga0209676_1002209 3300025292 Bacteria 14520
87 Ga0209676_1009391 3300025292 Bacteria 4222
88 Ga0209676_1011529 3300025292 Bacteria 3556
89 Ga0209676_1029343 3300025292 Bacteria 1699
90 Ga0209025_1000039 3300025294 Bacteria 377396
91 Ga0209025_1000041 3300025294 Bacteria 373694
92 Ga0209025_1002176 3300025294 Bacteria 21777
93 Ga0209025_1009427 3300025294 Bacteria 6803
94 Ga0209025_1009429 3300025294 Bacteria 6800
95 Ga0209025_1011521 3300025294 Bacteria 5810
96 Ga0209025_1028251 3300025294 Bacteria 2756
97 Ga0209025_1032626 3300025294 Bacteria 2428
98 Ga0209025_1032638 3300025294 Bacteria 2427
99 Ga0207655_1002088 3300025728 Bacteria 16755
100 Ga0207713_1001178 3300025735 Bacteria 22052
101 Ga0207710_10001586 3300025900 Bacteria 11137
102 Ga0207710_10043689 3300025900 Bacteria 1994
103 Ga0207680_10067859 3300025903 Bacteria 2198
104 Ga0207684_10026880 3300025910 Bacteria 4907
105 Ga0207695_10000040 3300025913 Bacteria 452787
106 Ga0207671_10025183 3300025914 Bacteria 4470
107 Ga0207663_10169987 3300025916 Bacteria 1547
108 Ga0207646_10051351 3300025922 Bacteria 3690
109 Ga0207646_10174709 3300025922 Bacteria 1940
110 Ga0207694_10002483 3300025924 Bacteria 15006
111 Ga0207664_10000005 3300025929 Bacteria 485048
112 Ga0207644_10009068 3300025931 Bacteria 6522
113 Ga0207690_10283712 3300025932 Bacteria 1290
114 Ga0207686_10075419 3300025934 Bacteria 2183
115 Ga0207709_10016361 3300025935 Bacteria 4123
116 Ga0207670_10001434 3300025936 Bacteria 12513
117 Ga0207670_10071012 3300025936 Bacteria 2407
118 Ga0207691_10016869 3300025940 Bacteria 6930
119 Ga0207711_10014300 3300025941 Bacteria 6590
120 Ga0207667_10001749 3300025949 Bacteria 27340
121 Ga0207703_10267465 3300026035 Unclassified 1547
122 Ga0207639_10017985 3300026041 Bacteria 5015
123 Ga0207678_10030856 3300026067 Bacteria 4679
124 Ga0207678_10032468 3300026067 Bacteria 4549
125 Ga0207678_10048707 3300026067 Bacteria 3662
126 Ga0207702_10237675 3300026078 Bacteria 1705
127 Ga0207702_10266706 3300026078 Bacteria 1614
128 Ga0207641_10003071 3300026088 Bacteria 15056
129 Ga0207683_10030857 3300026121 Bacteria 4647
130 Ga0207698_10028143 3300026142 Bacteria 4003
131 Ga0268265_10004255 3300028380 Bacteria 9995
132 Ga0265338_10000118 3300028800 Bacteria 146710
133 Ga0307511_10000851 3300030521 Bacteria 32500
134 Ga0265332_10032767 3300031238 Bacteria 2264
135 Ga0265327_10027167 3300031251 Bacteria 3299
136 Ga0265327_10062254 3300031251 Bacteria 1900
137 Ga0265316_10146703 3300031344 Bacteria 1769
138 Ga0307408_100090262 3300031548 Bacteria 2312
139 Ga0307408_100133067 3300031548 Bacteria 1942
140 Ga0307508_10004852 3300031616 Bacteria 12949
141 Ga0307507_10023456 3300033179 Bacteria 6773
142 Ga0307507_10214496 3300033179 Bacteria 1306
143 Ga0373934_0011303 3300035086 Unclassified 3360
144 Ga0316574_0022445 3300035398 Bacteria 3756
145 Ga0373931_0012339 3300035691 Bacteria 4139
146 Ga0373927_0019780 3300035695 Bacteria 4415
147 Ga0373933_0005344 3300035724 Bacteria 7000
148 Ga0373925_0088401 3300037068 Bacteria 2366
149 Ga0373925_0342002 3300037068 Bacteria 1214
150 Ga0395901_0113933 3300038443 Bacteria 2840
151 Ga0436360_0780167 3300039438 Bacteria 4484
152 Ga0436363_0385326 3300039450 Bacteria 21920
153 Ga0451853_2020901 3300041512 Bacteria 1797
154 Ga0451853_3263281 3300041512 Bacteria 1461
155 Ga0451577_0067379 3300042876 Bacteria 3193
156 Ga0466964_0052851 3300044706 Bacteria 1671
157 Ga0453684_0000814 3300044712 Bacteria 105915
158 Ga0451576_0323252 3300045051 Bacteria 1615
159 Ga0495592_0207119 3300046454 Bacteria 1319
160 Ga0495584_0047710 3300046491 Bacteria 2160
161 Ga0495585_0003563 3300046492 Bacteria 10450
162 Ga0495607_0000009 3300046501 Bacteria 216674
163 Ga0495658_0042125 3300046683 Unclassified 2548
164 Ga0495676_0048515 3300047321 Bacteria 3423
165 Ga0496100_0001649 3300048903 Bacteria 11053
166 Ga0496101_0002658 3300048904 Bacteria 10972
167 Ga0496102_0072454 3300048905 Bacteria 3166
168 Ga0496102_0106514 3300048905 Bacteria 2609
169 Ga0496103_0003169 3300048906 Bacteria 10112
170 Ga0496104_0008007 3300048907 Bacteria 9371
171 Ga0496105_0019361 3300048908 Bacteria 5489
172 Ga0496106_0013472 3300048909 Bacteria 6037
173 Ga0496106_0128730 3300048909 Bacteria 1984
174 Ga0496107_0010414 3300048910 Bacteria 6457
175 Ga0496107_0087315 3300048910 Bacteria 2277
176 Ga0496108_0004149 3300048911 Bacteria 11653
177 Ga0496109_0013646 3300048912 Bacteria 7056
178 Ga0496110_0003407 3300048913 Bacteria 12162
179 Ga0496111_0002697 3300048914 Bacteria 10782
180 Ga0496112_0001416 3300048915 Bacteria 18345
181 Ga0496113_0002987 3300048916 Bacteria 10013
182 Ga0496117_0035445 3300048920 Bacteria 3745
183 Ga0496117_0072881 3300048920 Bacteria 2293
184 Ga0496118_0011074 3300048921 Bacteria 8852
185 Ga0496119_0001898 3300048922 Bacteria 24001
186 Ga0496121_0011858 3300048924 Bacteria 9598
187 Ga0496122_0016813 3300048925 Bacteria 6888
188 Ga0496123_0041157 3300048926 Bacteria 3207
189 Ga0496124_0000007 3300048927 Bacteria 883534
190 Ga0496125_0004427 3300048928 Bacteria 16219
191 Ga0496126_0007422 3300048929 Bacteria 12026
192 Ga0496126_0094851 3300048929 Bacteria 2618
193 Ga0496126_0118144 3300048929 Bacteria 2302
194 Ga0501306_002165 3300049127 Bacteria 1976
195 Ga0501305_000815 3300049161 Bacteria 2767
196 Ga0501307_000894 3300049162 Bacteria 2292
197 Ga0501311_000975 3300049527 Bacteria 2314
198 Ga0501312_001503 3300049528 Bacteria 2306
199 Ga0501315_013850 3300049531 Bacteria 1015
200 Ga0501317_000526 3300049533 Bacteria 2765
201 Ga0501321_008520 3300049537 Bacteria 1090
202 Ga0501324_000415 3300049540 Bacteria 2267
203 Ga0501033_0001795 3300049570 Bacteria 18727
204 Ga0501033_0013658 3300049570 Bacteria 6179
205 Ga0501033_0018280 3300049570 Bacteria 5296
206 Ga0501034_0040612 3300049571 Bacteria 4709
207 Ga0501034_0109233 3300049571 Bacteria 2757
208 Ga0501037_0076174 3300049573 Bacteria 2436
209 Ga0501046_0143420 3300049580 Bacteria 1806
210 Ga0501047_0003401 3300049581 Bacteria 15066
211 Ga0501047_0236344 3300049581 Bacteria 1679
212 Ga0501047_0342497 3300049581 Bacteria 1332
213 Ga0501048_0303340 3300049582 Bacteria 1136
214 Ga0501070_0284140 3300049586 Bacteria 1350
215 Ga0501073_0047276 3300049589 Bacteria 3024
216 Ga0501077_0042494 3300049593 Bacteria 2890
217 Ga0501217_039911 3300049661 Bacteria 1191
218 Ga0501079_0153883 3300049741 Bacteria 1792
219 Ga0501083_0042237 3300049744 Bacteria 3092
220 Ga0501035_0001552 3300049822 Bacteria 23412
221 Ga0501035_0004718 3300049822 Bacteria 12947
222 Ga0501035_0029790 3300049822 Bacteria 4978
223 Ga0501035_0142729 3300049822 Bacteria 2081
224 Ga0501035_0280463 3300049822 Bacteria 1408
225 Ga0501044_0000185 3300049823 Bacteria 77663
226 Ga0501044_0001443 3300049823 Bacteria 27936
227 Ga0501044_0035721 3300049823 Bacteria 5203
228 Ga0501044_0080002 3300049823 Bacteria 3310
229 nmdc:mga03683_70999_c1 3300050489 Bacteria 1489
230 nmdc:mga03n38_31230_c1 3300050490 Bacteria 2246
231 nmdc:mga0yw44_154501_c1 3300050492 Bacteria 1499
232 nmdc:mga0k408_49291_c1 3300050493 Bacteria 2438
233 nmdc:mga06z11_42781_c1 3300050494 Bacteria 2275
234 nmdc:mga04h51_2135_c1 3300050495 Bacteria 4633
235 nmdc:mga07m45_1893_c1 3300050496 Bacteria 9652
236 nmdc:mga05p37_12625_c1 3300050507 Bacteria 10088
237 nmdc:mga05p37_13779_c1 3300050507 Bacteria 8328
238 nmdc:mga05p37_19024_c1 3300050507 Bacteria 8305
239 nmdc:mga05p37_30483_c1 3300050507 Bacteria 6581
240 nmdc:mga05p37_3828_c1 3300050507 Bacteria 17597
241 nmdc:mga0qj67_26317_c1 3300050509 Bacteria 4504
242 nmdc:mga06r32_6384_c1 3300050510 Bacteria 10594
243 nmdc:mga08y16_109410_c1 3300050511 Bacteria 2877
244 nmdc:mga08y16_242518_c1 3300050511 Bacteria 1863
245 nmdc:mga0n895_256265_c1 3300050512 Bacteria 1775
246 Ga0500562_000253 3300053108 Bacteria 13760
247 Ga0500568_0008945 3300053139 Bacteria 4789
248 Ga0500568_0034272 3300053139 Bacteria 2078
249 Ga0500600_0013438 3300053149 Unclassified 4974
250 Ga0500604_0004136 3300053151 Bacteria 3870
251 Ga0501084_0035570 3300054114 Bacteria 4164
252 Ga0501082_0000353 3300060353 Bacteria 40490

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009101 Ga0105247_10003391 Ga0105247_100033912 271
2 3300025900 Ga0207710_10001586 Ga0207710_100015862 271
3 3300005353 Ga0070669_100010935 Ga0070669_1000109354 281
4 3300025936 Ga0207670_10071012 Ga0207670_100710124 281
5 3300028380 Ga0268265_10004255 Ga0268265_100042553 281
6 3300049822 Ga0501035_0280463 Ga0501035_0280463_307_1317 282
7 3300049570 Ga0501033_0018280 Ga0501033_0018280_1163_2173 283
8 3300049580 Ga0501046_0143420 Ga0501046_0143420_478_1488 284
9 3300049581 Ga0501047_0342497 Ga0501047_0342497_89_1099 284
10 3300049822 Ga0501035_0029790 Ga0501035_0029790_3240_4250 284
11 3300053139 Ga0500568_0008945 Ga0500568_0008945_21_908 289
12 3300053149 Ga0500600_0013438 Ga0500600_0013438_1269_2183 290
13 3300049822 Ga0501035_0142729 Ga0501035_0142729_933_1943 291
14 3300049823 Ga0501044_0035721 Ga0501044_0035721_2279_3289 291
15 3300049570 Ga0501033_0013658 Ga0501033_0013658_1089_2099 297
16 3300049586 Ga0501070_0284140 Ga0501070_0284140_176_1186 297
17 iso_pu_bacteria 2895511927 2895515766 301
18 3300009147 Ga0114129_10028163 Ga0114129_1002816310 302
19 3300050507 nmdc:mga05p37_12625_c1 nmdc:mga05p37_12625_c1_376_1380 302
20 3300049582 Ga0501048_0303340 Ga0501048_0303340_17_985 303
21 3300031548 Ga0307408_100090262 Ga0307408_1000902622 304
22 3300039438 Ga0436360_0780167 Ga0436360_0780167_344_1342 305
23 3300006051 Ga0075364_10017875 Ga0075364_100178756 307
24 3300049531 Ga0501315_013850 Ga0501315_013850_11_985 308
25 3300049537 Ga0501321_008520 Ga0501321_008520_12_986 308
26 3300005435 Ga0070714_100000082 Ga0070714_10000008267 311
27 3300006028 Ga0070717_10001067 Ga0070717_100010673 311
28 3300025929 Ga0207664_10000005 Ga0207664_10000005165 311
29 3300005338 Ga0068868_100331180 Ga0068868_1003311802 312
30 3300005455 Ga0070663_100024843 Ga0070663_1000248437 312
31 3300005466 Ga0070685_10000451 Ga0070685_100004518 312
32 3300009093 Ga0105240_10000906 Ga0105240_1000090629 312
33 3300009093 Ga0105240_10082727 Ga0105240_100827274 312
34 3300009551 Ga0105238_10012867 Ga0105238_100128674 312
35 3300010375 Ga0105239_10182570 Ga0105239_101825702 312
36 3300025913 Ga0207695_10000040 Ga0207695_1000004098 312
37 3300025914 Ga0207671_10025183 Ga0207671_100251834 312
38 3300025924 Ga0207694_10002483 Ga0207694_100024834 312
39 3300026067 Ga0207678_10030856 Ga0207678_100308562 312
40 3300026067 Ga0207678_10032468 Ga0207678_100324686 312
41 3300026142 Ga0207698_10028143 Ga0207698_100281434 312
42 3300048909 Ga0496106_0013472 Ga0496106_0013472_496_1476 312
43 3300048910 Ga0496107_0087315 Ga0496107_0087315_265_1245 312
44 3300048920 Ga0496117_0035445 Ga0496117_0035445_2355_3365 312
45 3300048921 Ga0496118_0011074 Ga0496118_0011074_1622_2632 312
46 3300005335 Ga0070666_10130858 Ga0070666_101308581 319
47 3300025903 Ga0207680_10067859 Ga0207680_100678592 319
48 3300049589 Ga0501073_0047276 Ga0501073_0047276_483_1496 320
49 3300049823 Ga0501044_0080002 Ga0501044_0080002_1557_2570 320
50 3300006846 Ga0075430_100000341 Ga0075430_10000034133 321
51 3300006847 Ga0075431_100014404 Ga0075431_1000144049 321
52 3300009147 Ga0114129_10005676 Ga0114129_1000567612 321
53 3300050507 nmdc:mga05p37_3828_c1 nmdc:mga05p37_3828_c1_4233_5231 321
54 3300050509 nmdc:mga0qj67_26317_c1 nmdc:mga0qj67_26317_c1_2110_3108 321
55 3300050510 nmdc:mga06r32_6384_c1 nmdc:mga06r32_6384_c1_4459_5457 321
56 3300006844 Ga0075428_100049213 Ga0075428_1000492134 322
57 3300048909 Ga0496106_0128730 Ga0496106_0128730_800_1789 322
58 3300050507 nmdc:mga05p37_30483_c1 nmdc:mga05p37_30483_c1_1769_2758 322
59 iso_pu_bacteria 2643221731 2644715976 323
60 iso_pu_bacteria 2643221732 2644724154 323
61 iso_pu_bacteria 2818991465 2819709448 323
62 iso_pu_bacteria 2842882022 2842884301 323
63 iso_pu_bacteria 2904524088 2904524670 323
64 iso_pu_bacteria 2919143609 2919146734 323
65 iso_pu_bacteria 2919517244 2919518657 323
66 iso_pu_bacteria 2919720352 2919723025 323
67 iso_pu_bacteria 2928093941 2928096448 323
68 iso_pu_bacteria 2929004312 2929006177 323
69 iso_pu_bacteria 2960319331 2960320648 323
70 iso_pu_bacteria 2960375949 2960380720 323
71 iso_pu_bacteria 8022893055 8022897973 323
72 iso_pu_bacteria 8022914991 8022917156 323
73 3300005617 Ga0068859_100291820 Ga0068859_1002918201 324
74 3300041512 Ga0451853_2020901 Ga0451853_2020901_635_1681 324
75 iso_pu_bacteria 2857576091 2857577988 324
76 iso_pu_bacteria 8022948649 8022949632 324
77 3300005468 Ga0070707_100404940 Ga0070707_1004049402 325
78 3300005471 Ga0070698_100009801 Ga0070698_10000980112 325
79 3300005563 Ga0068855_100000182 Ga0068855_10000018218 325
80 3300021377 Ga0213874_10002647 Ga0213874_100026474 325
81 3300025916 Ga0207663_10169987 Ga0207663_101699872 325
82 3300025922 Ga0207646_10051351 Ga0207646_100513515 325
83 3300025949 Ga0207667_10001749 Ga0207667_100017496 325
84 3300039450 Ga0436363_0385326 Ga0436363_0385326_15812_16816 325
85 3300044712 Ga0453684_0000814 Ga0453684_0000814_100791_101783 325
86 3300053108 Ga0500562_000253 Ga0500562_000253_170_1168 325
87 iso_pu_bacteria 2593339131 2595087736 325
88 iso_pu_bacteria 2757320391 2757565722 325
89 iso_pu_bacteria 2775507177 2777761357 325
90 iso_pu_bacteria 2775507192 2777838812 325
91 iso_pu_bacteria 2788500588 2791212700 325
92 iso_pu_bacteria 2818991451 2819626845 325
93 iso_pu_bacteria 2904606771 2904606962 325
94 iso_pu_bacteria 2936340661 2936341595 325
95 iso_pu_bacteria 2939593269 2939595424 325
96 iso_pu_bacteria 8055531788 8055533437 325
97 3300003187 JGI25151J46595_10012021 JGI25151J46595_100120215 326
98 3300003316 rootH1_10007388 rootH1_1000738815 326
99 3300003320 rootH2_10318840 rootH2_103188403 326
100 3300003322 rootL2_10011855 rootL2_1001185511 326
101 3300003578 Ga0006562J51391_1001554 Ga0006562J51391_10015545 326
102 3300003758 Ga0055532_1002251 Ga0055532_10022512 326
103 3300003790 Ga0055528_1001271 Ga0055528_10012717 326
104 3300005331 Ga0070670_100127266 Ga0070670_1001272661 326
105 3300005355 Ga0070671_100007284 Ga0070671_1000072844 326
106 3300005364 Ga0070673_100075858 Ga0070673_1000758583 326
107 3300005445 Ga0070708_100043909 Ga0070708_1000439094 326
108 3300005467 Ga0070706_100032165 Ga0070706_1000321656 326
109 3300005468 Ga0070707_100045297 Ga0070707_1000452973 326
110 3300005543 Ga0070672_100122574 Ga0070672_1001225742 326
111 3300005617 Ga0068859_100347549 Ga0068859_1003475492 326
112 3300005841 Ga0068863_100004361 Ga0068863_1000043615 326
113 3300006178 Ga0075367_10082964 Ga0075367_100829643 326
114 3300006195 Ga0075366_10043486 Ga0075366_100434863 326
115 3300006195 Ga0075366_10110020 Ga0075366_101100202 326
116 3300006931 Ga0097620_100347536 Ga0097620_1003475362 326
117 3300009098 Ga0105245_10033137 Ga0105245_100331373 326
118 3300009101 Ga0105247_10072497 Ga0105247_100724974 326
119 3300009147 Ga0114129_10008079 Ga0114129_1000807916 326
120 3300009147 Ga0114129_10053054 Ga0114129_100530544 326
121 3300009148 Ga0105243_10001152 Ga0105243_1000115225 326
122 3300009176 Ga0105242_10026337 Ga0105242_100263375 326
123 3300009177 Ga0105248_10036321 Ga0105248_100363212 326
124 3300011119 Ga0105246_10008508 Ga0105246_100085087 326
125 3300013297 Ga0157378_10003912 Ga0157378_100039128 326
126 3300013306 Ga0163162_10000028 Ga0163162_10000028102 326
127 3300014745 Ga0157377_10000698 Ga0157377_1000069811 326
128 3300017792 Ga0163161_10208466 Ga0163161_102084662 326
129 3300025229 Ga0209147_100737 Ga0209147_10073716 326
130 3300025242 Ga0209258_106256 Ga0209258_1062562 326
131 3300025272 Ga0209455_1000820 Ga0209455_100082017 326
132 3300025294 Ga0209025_1032626 Ga0209025_10326263 326
133 3300025294 Ga0209025_1032638 Ga0209025_10326383 326
134 3300025728 Ga0207655_1002088 Ga0207655_10020886 326
135 3300025735 Ga0207713_1001178 Ga0207713_100117819 326
136 3300025900 Ga0207710_10043689 Ga0207710_100436892 326
137 3300025910 Ga0207684_10026880 Ga0207684_100268807 326
138 3300025922 Ga0207646_10174709 Ga0207646_101747093 326
139 3300025931 Ga0207644_10009068 Ga0207644_100090685 326
140 3300025934 Ga0207686_10075419 Ga0207686_100754192 326
141 3300025935 Ga0207709_10016361 Ga0207709_100163612 326
142 3300025940 Ga0207691_10016869 Ga0207691_100168698 326
143 3300025941 Ga0207711_10014300 Ga0207711_100143004 326
144 3300026035 Ga0207703_10267465 Ga0207703_102674652 326
145 3300026067 Ga0207678_10048707 Ga0207678_100487071 326
146 3300026088 Ga0207641_10003071 Ga0207641_1000307114 326
147 3300030521 Ga0307511_10000851 Ga0307511_1000085118 326
148 3300031251 Ga0265327_10027167 Ga0265327_100271672 326
149 3300031251 Ga0265327_10062254 Ga0265327_100622542 326
150 3300031548 Ga0307408_100133067 Ga0307408_1001330672 326
151 3300031616 Ga0307508_10004852 Ga0307508_100048526 326
152 3300033179 Ga0307507_10023456 Ga0307507_100234567 326
153 3300033179 Ga0307507_10214496 Ga0307507_102144962 326
154 3300035086 Ga0373934_0011303 Ga0373934_0011303_292_1287 326
155 3300035724 Ga0373933_0005344 Ga0373933_0005344_5865_6860 326
156 3300046491 Ga0495584_0047710 Ga0495584_0047710_970_2001 326
157 3300046492 Ga0495585_0003563 Ga0495585_0003563_7187_8218 326
158 3300046683 Ga0495658_0042125 Ga0495658_0042125_752_1747 326
159 3300047321 Ga0495676_0048515 Ga0495676_0048515_217_1248 326
160 3300048903 Ga0496100_0001649 Ga0496100_0001649_5106_6146 326
161 3300048904 Ga0496101_0002658 Ga0496101_0002658_809_1849 326
162 3300048905 Ga0496102_0106514 Ga0496102_0106514_1265_2305 326
163 3300048906 Ga0496103_0003169 Ga0496103_0003169_3454_4494 326
164 3300048907 Ga0496104_0008007 Ga0496104_0008007_2346_3386 326
165 3300048908 Ga0496105_0019361 Ga0496105_0019361_4145_5185 326
166 3300048910 Ga0496107_0010414 Ga0496107_0010414_1149_2189 326
167 3300048911 Ga0496108_0004149 Ga0496108_0004149_4144_5184 326
168 3300048912 Ga0496109_0013646 Ga0496109_0013646_4908_5948 326
169 3300048913 Ga0496110_0003407 Ga0496110_0003407_809_1849 326
170 3300048914 Ga0496111_0002697 Ga0496111_0002697_4509_5549 326
171 3300048915 Ga0496112_0001416 Ga0496112_0001416_16041_17081 326
172 3300048916 Ga0496113_0002987 Ga0496113_0002987_4277_5317 326
173 3300048920 Ga0496117_0072881 Ga0496117_0072881_361_1401 326
174 3300048922 Ga0496119_0001898 Ga0496119_0001898_7017_8057 326
175 3300048925 Ga0496122_0016813 Ga0496122_0016813_5747_6787 326
176 3300048926 Ga0496123_0041157 Ga0496123_0041157_1974_3014 326
177 3300048928 Ga0496125_0004427 Ga0496125_0004427_8305_9345 326
178 3300048929 Ga0496126_0007422 Ga0496126_0007422_1546_2586 326
179 3300049127 Ga0501306_002165 Ga0501306_002165_103_1134 326
180 3300049161 Ga0501305_000815 Ga0501305_000815_68_1099 326
181 3300049162 Ga0501307_000894 Ga0501307_000894_1195_2226 326
182 3300049527 Ga0501311_000975 Ga0501311_000975_120_1160 326
183 3300049528 Ga0501312_001503 Ga0501312_001503_102_1142 326
184 3300049533 Ga0501317_000526 Ga0501317_000526_69_1100 326
185 3300049540 Ga0501324_000415 Ga0501324_000415_68_1099 326
186 3300049571 Ga0501034_0109233 Ga0501034_0109233_1303_2340 326
187 3300049581 Ga0501047_0236344 Ga0501047_0236344_337_1350 326
188 3300049661 Ga0501217_039911 Ga0501217_039911_33_1073 326
189 3300049744 Ga0501083_0042237 Ga0501083_0042237_810_1823 326
190 3300049823 Ga0501044_0000185 Ga0501044_0000185_17557_18591 326
191 3300050489 nmdc:mga03683_70999_c1 nmdc:mga03683_70999_c1_16_996 326
192 3300050490 nmdc:mga03n38_31230_c1 nmdc:mga03n38_31230_c1_635_1615 326
193 3300050492 nmdc:mga0yw44_154501_c1 nmdc:mga0yw44_154501_c1_203_1183 326
194 3300050493 nmdc:mga0k408_49291_c1 nmdc:mga0k408_49291_c1_23_1003 326
195 3300050494 nmdc:mga06z11_42781_c1 nmdc:mga06z11_42781_c1_471_1451 326
196 3300050495 nmdc:mga04h51_2135_c1 nmdc:mga04h51_2135_c1_855_1835 326
197 3300050496 nmdc:mga07m45_1893_c1 nmdc:mga07m45_1893_c1_6857_7837 326
198 3300050507 nmdc:mga05p37_13779_c1 nmdc:mga05p37_13779_c1_396_1394 326
199 3300050511 nmdc:mga08y16_242518_c1 nmdc:mga08y16_242518_c1_205_1209 326
200 3300050512 nmdc:mga0n895_256265_c1 nmdc:mga0n895_256265_c1_32_1036 326
201 3300053139 Ga0500568_0034272 Ga0500568_0034272_1013_2005 326
202 3300053151 Ga0500604_0004136 Ga0500604_0004136_2381_3373 326
203 3300054114 Ga0501084_0035570 Ga0501084_0035570_18_1031 326
204 3300060353 Ga0501082_0000353 Ga0501082_0000353_14470_15483 326
205 iso_pu_bacteria 2738543017 2739270059 326
206 iso_pu_bacteria 2857586860 2857587433 326
207 3300005329 Ga0070683_100176648 Ga0070683_1001766482 327
208 3300006028 Ga0070717_10088595 Ga0070717_100885952 327
209 3300031344 Ga0265316_10146703 Ga0265316_101467031 327
210 iso_pu_bacteria 3006826541 3006827964 327
211 3300003187 JGI25151J46595_10000045 JGI25151J46595_1000004595 328
212 3300003187 JGI25151J46595_10001503 JGI25151J46595_100015035 328
213 3300003187 JGI25151J46595_10006445 JGI25151J46595_100064451 328
214 3300003187 JGI25151J46595_10010608 JGI25151J46595_100106082 328
215 3300003187 JGI25151J46595_10010640 JGI25151J46595_100106402 328
216 3300003751 Ga0055538_1000287 Ga0055538_100028726 328
217 3300003758 Ga0055532_1000079 Ga0055532_1000079130 328
218 3300005340 Ga0070689_100006696 Ga0070689_1000066964 328
219 3300005434 Ga0070709_10324327 Ga0070709_103243271 328
220 3300005456 Ga0070678_100153710 Ga0070678_1001537102 328
221 3300005468 Ga0070707_100077390 Ga0070707_1000773902 328
222 3300005539 Ga0068853_100006895 Ga0068853_1000068956 328
223 3300005614 Ga0068856_100374204 Ga0068856_1003742042 328
224 3300006051 Ga0075364_10001457 Ga0075364_100014576 328
225 3300006051 Ga0075364_10022258 Ga0075364_100222584 328
226 3300006844 Ga0075428_100226363 Ga0075428_1002263632 328
227 3300006931 Ga0097620_100291787 Ga0097620_1002917872 328
228 3300009094 Ga0111539_10021043 Ga0111539_100210435 328
229 3300009094 Ga0111539_10149886 Ga0111539_101498862 328
230 3300009147 Ga0114129_10038596 Ga0114129_100385966 328
231 3300013308 Ga0157375_10401814 Ga0157375_104018142 328
232 3300025224 Ga0209784_100031 Ga0209784_100031142 328
233 3300025229 Ga0209147_100014 Ga0209147_100014513 328
234 3300025292 Ga0209676_1002209 Ga0209676_10022092 328
235 3300025292 Ga0209676_1009391 Ga0209676_10093912 328
236 3300025292 Ga0209676_1011529 Ga0209676_10115292 328
237 3300025292 Ga0209676_1029343 Ga0209676_10293432 328
238 3300025294 Ga0209025_1000039 Ga0209025_1000039260 328
239 3300025294 Ga0209025_1000041 Ga0209025_1000041398 328
240 3300025294 Ga0209025_1002176 Ga0209025_10021763 328
241 3300025294 Ga0209025_1009427 Ga0209025_10094275 328
242 3300025294 Ga0209025_1009429 Ga0209025_10094294 328
243 3300025294 Ga0209025_1011521 Ga0209025_10115212 328
244 3300025294 Ga0209025_1028251 Ga0209025_10282514 328
245 3300025932 Ga0207690_10283712 Ga0207690_102837121 328
246 3300025936 Ga0207670_10001434 Ga0207670_100014344 328
247 3300026041 Ga0207639_10017985 Ga0207639_100179856 328
248 3300026078 Ga0207702_10237675 Ga0207702_102376752 328
249 3300026078 Ga0207702_10266706 Ga0207702_102667062 328
250 3300026121 Ga0207683_10030857 Ga0207683_100308573 328
251 3300035398 Ga0316574_0022445 Ga0316574_0022445_380_1390 328
252 3300035691 Ga0373931_0012339 Ga0373931_0012339_285_1283 328
253 3300035695 Ga0373927_0019780 Ga0373927_0019780_2830_3828 328
254 3300037068 Ga0373925_0088401 Ga0373925_0088401_976_1974 328
255 3300037068 Ga0373925_0342002 Ga0373925_0342002_58_1065 328
256 3300038443 Ga0395901_0113933 Ga0395901_0113933_268_1299 328
257 3300041512 Ga0451853_3263281 Ga0451853_3263281_303_1325 328
258 3300042876 Ga0451577_0067379 Ga0451577_0067379_1390_2412 328
259 3300044706 Ga0466964_0052851 Ga0466964_0052851_17_1018 328
260 3300045051 Ga0451576_0323252 Ga0451576_0323252_407_1417 328
261 3300046501 Ga0495607_0000009 Ga0495607_0000009_32882_33913 328
262 3300048905 Ga0496102_0072454 Ga0496102_0072454_1439_2494 328
263 3300048924 Ga0496121_0011858 Ga0496121_0011858_8469_9518 328
264 3300049570 Ga0501033_0001795 Ga0501033_0001795_3670_4743 328
265 3300049571 Ga0501034_0040612 Ga0501034_0040612_1964_3037 328
266 3300049581 Ga0501047_0003401 Ga0501047_0003401_5883_6956 328
267 3300049593 Ga0501077_0042494 Ga0501077_0042494_1831_2859 328
268 3300049741 Ga0501079_0153883 Ga0501079_0153883_59_1087 328
269 3300049822 Ga0501035_0001552 Ga0501035_0001552_3481_4554 328
270 3300049823 Ga0501044_0001443 Ga0501044_0001443_22499_23572 328
271 3300050507 nmdc:mga05p37_19024_c1 nmdc:mga05p37_19024_c1_2673_3689 328
272 3300050511 nmdc:mga08y16_109410_c1 nmdc:mga08y16_109410_c1_1164_2219 328
273 iso_pu_bacteria 2501025501 2501070770 328
274 iso_pu_bacteria 2501025502 2501080296 328
275 iso_pu_bacteria 2501025504 2501413605 328
276 iso_pu_bacteria 2510917013 2511089727 328
277 iso_pu_bacteria 2510917014 2511095124 328
278 iso_pu_bacteria 2510917015 2511104783 328
279 iso_pu_bacteria 2513237082 2513551361 328
280 iso_pu_bacteria 2513237083 2513560003 328
281 iso_pu_bacteria 2515154189 2516016765 328
282 iso_pu_bacteria 2600255067 2600810290 328
283 iso_pu_bacteria 2721755763 2723876206 328
284 iso_pu_bacteria 2739367655 2739611431 328
285 iso_pu_bacteria 2855730933 2855735329 328
286 iso_pu_bacteria 2855767633 2855771113 328
287 iso_pu_bacteria 2856287931 2856293226 328
288 iso_pu_bacteria 2857357740 2857366655 328
289 iso_pu_bacteria 2881412998 2881417037 328
290 iso_pu_bacteria 2881927736 2881929734 328
291 iso_pu_bacteria 2883087390 2883090552 328
292 iso_pu_bacteria 3006826541 3006826986 328
293 iso_pu_bacteria 8002392321 8002395719 328
294 iso_pu_bacteria 8003955200 8003957268 328
295 iso_pu_bacteria 8048746797 8048747331 328
296 iso_pu_bacteria 8055225921 8055228559 328
297 iso_pu_bacteria 8057632132 8057635194 328
298 3300048927 Ga0496124_0000007 Ga0496124_0000007_298556_299665 331
299 3300049573 Ga0501037_0076174 Ga0501037_0076174_424_1482 331
300 3300049822 Ga0501035_0004718 Ga0501035_0004718_248_1306 331
301 iso_pu_bacteria 2857542790 2857543972 331
302 3300001990 JGI24737J22298_10001797 JGI24737J22298_100017977 332
303 3300028800 Ga0265338_10000118 Ga0265338_1000011821 332
304 3300031238 Ga0265332_10032767 Ga0265332_100327672 332
305 3300046454 Ga0495592_0207119 Ga0495592_0207119_168_1166 332
306 3300048929 Ga0496126_0094851 Ga0496126_0094851_363_1376 332
307 3300048929 Ga0496126_0118144 Ga0496126_0118144_784_1797 332
308 iso_pu_bacteria 2751185846 2753566294 332

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07479

NAD_Gly3P_dh_C

NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus

220

360

0.98

PF20618

GPD_NAD_C_bact

Bacterial GPD, NAD-dependent C-terminal

280

345

0.92

PF01210

NAD_Gly3P_dh_N

NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus

29

201

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
6f32-assembly1.cif.gz_A crystal structure of a dual function amine oxidase/cyclase in complex with substrate analogues 0.9712 3 32
1ju2-assembly1.cif.gz_A crystal structure of the hydroxynitrile lyase from almond 0.9692 2 30
6f7l-assembly1.cif.gz_B crystal structure of lkce r326q mutant in complex with its substrate 0.9627 3 32
3k96-assembly1.cif.gz_B 2.1 angstrom resolution crystal structure of glycerol-3-phosphate dehydrogenase (gpsa) from coxiella burnetii 0.9582 3 327
6fjh-assembly1.cif.gz_B crystal structure of the seleniated lkce from streptomyces rochei 0.9554 3 32
ID Description Score Start End Superfamily
af_P9WN75_188_329_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9912 186 326 1.10.1040.10
af_Q2FYG1_190_332_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9895 190 332 1.10.1040.10
af_Q2FYG1_190_332_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9827 190 332 1.10.1040.10
af_P9WN77_188_331_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9802 186 329 1.10.1040.10
af_P9WN75_188_329_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9774 186 326 1.10.1040.10
ID Description Score Start End GO Terms
AF-A0A226WPA4-F1-model_v4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)(+)-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase) 0.999 1 332 GO:0005829
GO:0005975
GO:0006650
GO:0008654
GO:0046167
GO:0046168
GO:0047952
GO:0051287
AF-A0A7H4Q2W8-F1-model_v4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)(+)-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase) 0.9982 1 332 GO:0005829
GO:0005975
GO:0006650
GO:0008654
GO:0046167
GO:0046168
GO:0047952
GO:0051287
AF-A0A328XRY6-F1-model_v4 deleted 0.9956 1 332
AF-B2JC99-F1-model_v4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)(+)-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase) 0.9955 1 332 GO:0005829
GO:0005975
GO:0006650
GO:0008654
GO:0046167
GO:0046168
GO:0047952
GO:0051287
AF-A0A532EH12-F1-model_v4 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC 1.1.1.94) 0.9932 180 327 GO:0005829
GO:0005975
GO:0006072
GO:0006116
GO:0008654
GO:0047952

Feature Viewer

pLDDT pTM Quality
96 0.93 High
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Predicted Structure (AlphaFold2)

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