F400015

General Info

Members Datasets Scaffolds Average Seq Length
309 190 618 808

Family's Representative Sequence

Representative Sequence 3300005289|Ga0065704_10070193|Ga0065704_100701933
Length 873
Sequence VGLHRAFRASLPDAQGTIAPTLPQIAFPRAFYMLHQGDGIAPQPSVPTCPVTGEVDVPPEIAGWFAGRGWRVRSHQQGMLAASDAGHHALLVADTGAGKTLAGFLPTLAAFCPSRIADGARPEGLHTLYVSPLKALATDVQRNLIVPVEEMGLDIRIEARSGDTPSDRKARQRAKPPHILLTTPESLSLLLSYPEAAEMFGGLQRVIIDEVHAFATGKRGDLLALSLARLQAISPTVRRAALSATLADADSYRGWLAPWGDIDTVDLVEGEPGADPEVDILLPREERIPWSGHAATWAIPQLIEQIVAHRTTLVFTNTRFLAEYIFQELWDANEGNLPIGIHHGSLSKEARRKVEAAMARGELRALVCTASLDLGIDWGDIDLVVQMGAPKGSSRLLQRIGRANHRLDQPSEALLVPGNRFEFLEAFAAQQAVREGQRDGDPFRPGGLDVLAQHVMAMVCSGPVREHELLEEVRSAMPYAWVDEAGLARVLDFVATGGYALRSYDRFRRIVREKDGHGGHRWRLAHPEHAARHRLNAGIIVDAEMLDVRFRNGRSLGKVEEGFGASLEPGDTFRFAGMDLEVESLKDLELVVRAAKRSATIPSYMGQRMPISTHLADRVRAMLSDRAGWARFPDDVREWLEAQDWRSRLPAPGRLLVESFPHRGLEYTSYFTFEGWNANQSLGMLVTRRMEDRGLGPLGFVATDYTLVVWGLKGVADPAALLSPDILTHEFVDWVQQSYLLRRAFREVAVISGLVERQFPGKRKSGRQVTFSTDLIFDVLRKYEPDHLLMEAAWADARARMTDVARVADVLDRAAREVDHVMLDRISPLAVPALSMIGRESLPSGAADDDLLMEAESLAAMAMRIDQPDDIDD

Samples

Sample ID Description Type Environment
1 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
35 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
36 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
37 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
38 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
85 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
86 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
87 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
88 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
89 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
90 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
91 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
92 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
93 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
94 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
95 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
96 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
97 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
98 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
99 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
100 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
101 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
102 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
103 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
104 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
105 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
106 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
107 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
108 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
109 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
110 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
111 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
112 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
113 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
114 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
115 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
116 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
117 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
118 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
119 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
120 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
125 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
128 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
129 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
130 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
131 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
132 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
133 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
134 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
135 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
139 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
140 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
141 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
142 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
145 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
146 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
147 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
148 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
149 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
150 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
151 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
152 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
153 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
154 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
155 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
156 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
157 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
158 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
159 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
160 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
161 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
162 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
163 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
164 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
165 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
166 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
167 3300053723 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere Metagenome Endosphere
168 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
169 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
170 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
171 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
172 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
173 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
174 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
175 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
176 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
177 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
178 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
179 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
180 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
181 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
182 2882806704 Pelagerythrobacter rhizovicinus AY-3R Isolate Rhizosphere
183 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
184 2896184354 Aurantiacibacter suaedae GH3-15 Isolate Rhizosphere
185 2896253425 Aurantiacibacter rhizosphaerae GH3-10 Isolate Rhizosphere
186 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
187 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
188 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
189 3000865235 Altericroceibacterium indicum DSM 18604 Isolate Rhizosphere
190 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.2
Metatranscriptomes 0
Isolates 6.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.24
Nodule 0
Rhizoplane 3.88
Rhizosphere 69.58
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065704_10070193 3300005289 Bacteria 98570
2 SwRhRL2b_contig_2535199 2162886007 Bacteria 3261
3 SwRhRL2b_contig_326334 2162886007 Bacteria 8878
4 JGI24749J21850_1000342 3300002076 Bacteria 7015
5 JGI24751J29686_10000365 3300002459 Bacteria 15503
6 Ga0065704_10070772 3300005289 Bacteria 16376
7 Ga0065704_10086213 3300005289 Bacteria 3135
8 Ga0070658_10000068 3300005327 Bacteria 102788
9 Ga0070670_100000024 3300005331 Bacteria 189811
10 Ga0070670_100000653 3300005331 Bacteria 26914
11 Ga0070666_10000054 3300005335 Bacteria 95458
12 Ga0070660_100006415 3300005339 Bacteria 8151
13 Ga0070661_100013897 3300005344 Bacteria 5657
14 Ga0070668_100000011 3300005347 Bacteria 123099
15 Ga0070668_100001305 3300005347 Bacteria 17832
16 Ga0070668_100009421 3300005347 Bacteria 7245
17 Ga0070668_100013160 3300005347 Bacteria 6168
18 Ga0070669_100000031 3300005353 Bacteria 154042
19 Ga0070669_100000052 3300005353 Bacteria 114467
20 Ga0070669_100000097 3300005353 Bacteria 86804
21 Ga0070669_100000227 3300005353 Bacteria 46918
22 Ga0070669_100001448 3300005353 Bacteria 17191
23 Ga0070675_100000168 3300005354 Bacteria 40494
24 Ga0070671_100000005 3300005355 Bacteria 256547
25 Ga0070671_100000041 3300005355 Bacteria 91555
26 Ga0070671_100000262 3300005355 Bacteria 35350
27 Ga0070671_100001269 3300005355 Bacteria 18920
28 Ga0070671_100003972 3300005355 Bacteria 11646
29 Ga0070659_100011045 3300005366 Bacteria 6669
30 Ga0070667_100000269 3300005367 Bacteria 59045
31 Ga0070667_100001585 3300005367 Bacteria 20376
32 Ga0070667_100002185 3300005367 Bacteria 17223
33 Ga0070667_100002952 3300005367 Bacteria 14615
34 Ga0070667_100011392 3300005367 Bacteria 7354
35 Ga0070667_100011612 3300005367 Bacteria 7281
36 Ga0070667_100012324 3300005367 Bacteria 7074
37 Ga0070662_100012242 3300005457 Bacteria 5681
38 Ga0070681_10062210 3300005458 Bacteria 3706
39 Ga0070679_100109814 3300005530 Bacteria 2744
40 Ga0068853_100002855 3300005539 Bacteria 13099
41 Ga0070665_100000079 3300005548 Bacteria 186925
42 Ga0070665_100005332 3300005548 Bacteria 13285
43 Ga0068855_100000667 3300005563 Bacteria 41874
44 Ga0070664_100013239 3300005564 Bacteria 6719
45 Ga0068857_100054079 3300005577 Bacteria 3562
46 Ga0068854_100001081 3300005578 Bacteria 16404
47 Ga0068854_100033009 3300005578 Bacteria 3606
48 Ga0068856_100021503 3300005614 Bacteria 6269
49 Ga0068852_100006681 3300005616 Bacteria 8360
50 Ga0068859_100000270 3300005617 Bacteria 51764
51 Ga0068859_100001606 3300005617 Bacteria 23093
52 Ga0068859_100021208 3300005617 Bacteria 6520
53 Ga0068859_100022991 3300005617 Bacteria 6252
54 Ga0068864_100000036 3300005618 Bacteria 189811
55 Ga0068861_100007836 3300005719 Bacteria 7344
56 Ga0068861_100041540 3300005719 Bacteria 3445
57 Ga0068863_100000090 3300005841 Bacteria 100887
58 Ga0068863_100000186 3300005841 Bacteria 65963
59 Ga0068863_100015637 3300005841 Bacteria 7288
60 Ga0068858_100002366 3300005842 Bacteria 19064
61 Ga0068858_100010829 3300005842 Bacteria 8621
62 Ga0068860_100000089 3300005843 Bacteria 152667
63 Ga0068860_100001847 3300005843 Bacteria 22545
64 Ga0068860_100018922 3300005843 Bacteria 6692
65 Ga0068862_100000043 3300005844 Bacteria 164356
66 Ga0068862_100002553 3300005844 Bacteria 16098
67 Ga0075368_10000845 3300006042 Bacteria 9477
68 Ga0075363_100017955 3300006048 Bacteria 3517
69 Ga0075432_10000082 3300006058 Bacteria 19252
70 Ga0075362_10000029 3300006177 Bacteria 56587
71 Ga0075369_10002435 3300006186 Bacteria 6633
72 Ga0075366_10000233 3300006195 Bacteria 24594
73 Ga0075370_10000011 3300006353 Bacteria 66429
74 Ga0097620_100000270 3300006931 Bacteria 51764
75 Ga0097620_100001606 3300006931 Bacteria 23093
76 Ga0097620_100021208 3300006931 Bacteria 6520
77 Ga0097620_100022991 3300006931 Bacteria 6252
78 Ga0105251_10003208 3300009011 Bacteria 12063
79 Ga0105240_10002141 3300009093 Bacteria 32242
80 Ga0105247_10000895 3300009101 Bacteria 22416
81 Ga0105248_10000081 3300009177 Bacteria 111105
82 Ga0105248_10012058 3300009177 Bacteria 9533
83 Ga0105248_10020935 3300009177 Bacteria 7249
84 Ga0105238_10008864 3300009551 Bacteria 10065
85 Ga0105249_10043050 3300009553 Bacteria 4107
86 Ga0157373_10025905 3300013100 Bacteria 4237
87 Ga0157371_10006044 3300013102 Bacteria 10076
88 Ga0157371_10009131 3300013102 Bacteria 7831
89 Ga0157369_10001048 3300013105 Bacteria 34926
90 Ga0163162_10001754 3300013306 Bacteria 20326
91 Ga0163162_10010472 3300013306 Bacteria 9014
92 Ga0157380_10000193 3300014326 Bacteria 35569
93 Ga0157380_10076205 3300014326 Bacteria 2729
94 Ga0163161_10002236 3300017792 Bacteria 13927
95 Ga0209050_1000937 3300025298 Bacteria 38116
96 Ga0207713_1000673 3300025735 Bacteria 32203
97 Ga0207713_1002484 3300025735 Bacteria 13406
98 Ga0207713_1021104 3300025735 Bacteria 3131
99 Ga0207680_10000183 3300025903 Bacteria 30332
100 Ga0207647_10023211 3300025904 Bacteria 4107
101 Ga0207705_10000124 3300025909 Bacteria 85292
102 Ga0207705_10005031 3300025909 Bacteria 9917
103 Ga0207695_10001916 3300025913 Bacteria 32377
104 Ga0207657_10000227 3300025919 Bacteria 58998
105 Ga0207652_10009509 3300025921 Bacteria 7816
106 Ga0207681_10000014 3300025923 Bacteria 353422
107 Ga0207681_10000030 3300025923 Bacteria 173766
108 Ga0207681_10000188 3300025923 Bacteria 50361
109 Ga0207681_10000241 3300025923 Bacteria 41914
110 Ga0207681_10000279 3300025923 Bacteria 38075
111 Ga0207650_10000015 3300025925 Bacteria 369173
112 Ga0207644_10000008 3300025931 Bacteria 354219
113 Ga0207644_10000017 3300025931 Bacteria 177818
114 Ga0207644_10000032 3300025931 Bacteria 133759
115 Ga0207644_10000167 3300025931 Bacteria 47677
116 Ga0207644_10016481 3300025931 Bacteria 4972
117 Ga0207690_10004763 3300025932 Bacteria 8004
118 Ga0207706_10021860 3300025933 Bacteria 5742
119 Ga0207711_10000162 3300025941 Bacteria 71805
120 Ga0207711_10006022 3300025941 Bacteria 10247
121 Ga0207667_10004514 3300025949 Bacteria 17055
122 Ga0207667_10006068 3300025949 Bacteria 14691
123 Ga0207668_10000034 3300025972 Bacteria 119274
124 Ga0207668_10006069 3300025972 Bacteria 7123
125 Ga0207668_10008170 3300025972 Bacteria 6230
126 Ga0207668_10008448 3300025972 Bacteria 6136
127 Ga0207640_10001262 3300025981 Bacteria 13744
128 Ga0207640_10005180 3300025981 Bacteria 7092
129 Ga0207658_10001181 3300025986 Bacteria 20849
130 Ga0207658_10001645 3300025986 Bacteria 17080
131 Ga0207658_10002271 3300025986 Bacteria 14204
132 Ga0207658_10006413 3300025986 Bacteria 8031
133 Ga0207703_10001806 3300026035 Bacteria 19081
134 Ga0207639_10005164 3300026041 Bacteria 8805
135 Ga0207678_10009107 3300026067 Bacteria 8742
136 Ga0207641_10000031 3300026088 Bacteria 224320
137 Ga0207641_10000069 3300026088 Bacteria 154022
138 Ga0207641_10001612 3300026088 Bacteria 22005
139 Ga0207641_10021126 3300026088 Bacteria 5350
140 Ga0207641_10022227 3300026088 Bacteria 5220
141 Ga0207676_10000021 3300026095 Bacteria 296572
142 Ga0207674_10029234 3300026116 Bacteria 5804
143 Ga0207674_10087255 3300026116 Bacteria 3114
144 Ga0207675_100001954 3300026118 Bacteria 20590
145 Ga0207698_10000067 3300026142 Bacteria 70181
146 Ga0209813_10000283 3300027866 Bacteria 14181
147 Ga0268266_10001007 3300028379 Bacteria 35510
148 Ga0268266_10001760 3300028379 Bacteria 24675
149 Ga0268266_10008710 3300028379 Bacteria 8990
150 Ga0268266_10060251 3300028379 Bacteria 3272
151 Ga0268265_10000013 3300028380 Bacteria 341536
152 Ga0268265_10000074 3300028380 Bacteria 127599
153 Ga0268265_10009154 3300028380 Bacteria 6692
154 Ga0268265_10066566 3300028380 Bacteria 2785
155 Ga0268264_10000160 3300028381 Bacteria 152653
156 Ga0268264_10000288 3300028381 Bacteria 84755
157 Ga0268264_10000785 3300028381 Bacteria 34613
158 Ga0268264_10004277 3300028381 Bacteria 12186
159 Ga0265331_10010714 3300031250 Bacteria 5055
160 Ga0307408_100011664 3300031548 Bacteria 5809
161 Ga0307508_10004107 3300031616 Bacteria 14355
162 Ga0307405_10000411 3300031731 Bacteria 16128
163 Ga0307413_10000406 3300031824 Bacteria 13825
164 Ga0307413_10003233 3300031824 Bacteria 6822
165 Ga0307410_10000260 3300031852 Bacteria 20184
166 Ga0307410_10008096 3300031852 Bacteria 5807
167 Ga0307410_10043757 3300031852 Bacteria 2970
168 Ga0307406_10005722 3300031901 Bacteria 6807
169 Ga0307407_10021142 3300031903 Bacteria 3350
170 Ga0307412_10001290 3300031911 Bacteria 14049
171 Ga0307412_10001536 3300031911 Bacteria 12772
172 Ga0307412_10008966 3300031911 Bacteria 5729
173 Ga0307414_10006569 3300032004 Bacteria 6490
174 Ga0307414_10009322 3300032004 Bacteria 5632
175 Ga0307414_10022836 3300032004 Bacteria 3955
176 Ga0307411_10000768 3300032005 Bacteria 11868
177 Ga0307411_10018867 3300032005 Bacteria 3969
178 Ga0316583_10002013 3300032133 Bacteria 6959
179 Ga0316582_0003282 3300036647 Bacteria 7894
180 Ga0439445_0000369 3300042004 Bacteria 9000
181 Ga0439462_0000298 3300042015 Bacteria 9192
182 Ga0453684_0185044 3300044712 Bacteria 2442
183 Ga0451576_0000024 3300045051 Bacteria 470499
184 Ga0495627_000507 3300046453 Bacteria 32459
185 Ga0495638_0000012 3300046460 Bacteria 435577
186 Ga0495650_0006232 3300046471 Bacteria 7477
187 Ga0495596_0000081 3300046500 Bacteria 65577
188 Ga0495596_0000154 3300046500 Bacteria 47820
189 Ga0495583_0023794 3300046506 Bacteria 3090
190 Ga0495606_0020599 3300046507 Bacteria 4855
191 Ga0495606_0038589 3300046507 Bacteria 3229
192 Ga0495610_0000015 3300046512 Bacteria 391489
193 Ga0495610_0001327 3300046512 Bacteria 21966
194 Ga0495610_0001618 3300046512 Bacteria 19803
195 Ga0495620_0019965 3300046515 Bacteria 3281
196 Ga0495632_0000770 3300046519 Bacteria 28759
197 Ga0495643_0001150 3300046522 Bacteria 25901
198 Ga0495643_0004801 3300046522 Bacteria 9318
199 Ga0495643_0013918 3300046522 Bacteria 4797
200 Ga0495609_0002324 3300046538 Bacteria 11745
201 Ga0495597_0008714 3300046542 Bacteria 5068
202 Ga0495668_0011598 3300046616 Bacteria 5270
203 Ga0495671_0007543 3300046692 Bacteria 6190
204 Ga0495687_026738 3300047443 Bacteria 2711
205 Ga0495681_0000062 3300047470 Bacteria 99851
206 Ga0495615_0000088 3300048090 Bacteria 27165
207 Ga0496101_0015638 3300048904 Bacteria 5119
208 Ga0496102_0001793 3300048905 Bacteria 18614
209 Ga0496103_0001294 3300048906 Bacteria 17057
210 Ga0496103_0026587 3300048906 Bacteria 3502
211 Ga0496104_0003016 3300048907 Bacteria 14501
212 Ga0496105_0000838 3300048908 Bacteria 20915
213 Ga0496105_0015587 3300048908 Bacteria 6060
214 Ga0496106_0000171 3300048909 Bacteria 47281
215 Ga0496107_0000853 3300048910 Bacteria 17891
216 Ga0496113_0024982 3300048916 Bacteria 4254
217 Ga0496113_0026654 3300048916 Bacteria 4135
218 Ga0496114_0043413 3300048917 Bacteria 3728
219 Ga0496116_0000045 3300048919 Bacteria 324307
220 Ga0496118_0023983 3300048921 Bacteria 5279
221 Ga0496118_0025075 3300048921 Bacteria 5126
222 Ga0496118_0036056 3300048921 Bacteria 4004
223 Ga0496119_0021095 3300048922 Bacteria 4721
224 Ga0496120_0002429 3300048923 Bacteria 18858
225 Ga0496121_0000017 3300048924 Bacteria 546415
226 Ga0496121_0001328 3300048924 Bacteria 42372
227 Ga0496121_0001456 3300048924 Bacteria 39986
228 Ga0496121_0041772 3300048924 Bacteria 4002
229 Ga0496121_0082483 3300048924 Bacteria 2541
230 Ga0496122_0000092 3300048925 Bacteria 204463
231 Ga0496122_0003264 3300048925 Bacteria 21512
232 Ga0496122_0003608 3300048925 Bacteria 20161
233 Ga0496123_0000089 3300048926 Bacteria 179941
234 Ga0496123_0001199 3300048926 Bacteria 37943
235 Ga0496123_0002307 3300048926 Bacteria 23963
236 Ga0496124_0001323 3300048927 Bacteria 37314
237 Ga0496124_0018750 3300048927 Bacteria 6468
238 Ga0496125_0015268 3300048928 Bacteria 7433
239 Ga0496125_0025305 3300048928 Bacteria 5438
240 Ga0496125_0029868 3300048928 Bacteria 4888
241 Ga0496126_0000568 3300048929 Bacteria 70707
242 Ga0496126_0001281 3300048929 Bacteria 40336
243 Ga0496126_0006831 3300048929 Bacteria 12660
244 Ga0501034_0013712 3300049571 Bacteria 8336
245 Ga0501223_000058 3300049663 Bacteria 36525
246 Ga0501224_000021 3300049664 Bacteria 68878
247 Ga0501235_002646 3300049669 Bacteria 3856
248 Ga0501225_0000022 3300049705 Bacteria 55780
249 Ga0501234_000595 3300049707 Bacteria 5550
250 Ga0501044_0002435 3300049823 Bacteria 21231
251 Ga0501226_000031 3300049853 Bacteria 74305
252 nmdc:mga03683_52_c1 3300050489 Bacteria 49169
253 nmdc:mga03683_61_c1 3300050489 Bacteria 41527
254 nmdc:mga00v17_1305_c1 3300050491 Bacteria 13063
255 nmdc:mga0k408_12_c1 3300050493 Bacteria 125427
256 nmdc:mga0k408_1890_c1 3300050493 Bacteria 11220
257 nmdc:mga06z11_221_c1 3300050494 Bacteria 22754
258 nmdc:mga04h51_104_c1 3300050495 Bacteria 25060
259 nmdc:mga07m45_11_c1 3300050496 Bacteria 163532
260 nmdc:mga07m45_130_c1 3300050496 Bacteria 29792
261 nmdc:mga07m45_9_c1 3300050496 Bacteria 171776
262 nmdc:mga06r32_8132_c1 3300050510 Bacteria 9438
263 nmdc:mga0sz30_1234_c1 3300050516 Bacteria 9130
264 nmdc:mga0sz30_190_c1 3300050516 Bacteria 22695
265 Ga0500643_000005 3300053087 Bacteria 539775
266 Ga0500643_000722 3300053087 Bacteria 21777
267 Ga0500643_001017 3300053087 Bacteria 17088
268 Ga0500643_004251 3300053087 Bacteria 6556
269 Ga0500556_0000037 3300053104 Bacteria 138433
270 Ga0500594_0003635 3300053118 Bacteria 3399
271 Ga0500607_000060 3300053121 Bacteria 77770
272 Ga0500607_000070 3300053121 Bacteria 73162
273 Ga0500608_000381 3300053122 Bacteria 17140
274 Ga0500618_006389 3300053125 Bacteria 3468
275 Ga0500642_0000002 3300053130 Bacteria 795093
276 Ga0500642_0003263 3300053130 Bacteria 4878
277 Ga0500655_000051 3300053133 Bacteria 32299
278 Ga0500559_0000547 3300053136 Bacteria 26048
279 Ga0500559_0001956 3300053136 Bacteria 11146
280 Ga0500559_0017503 3300053136 Bacteria 3027
281 Ga0500564_000226 3300053138 Bacteria 15670
282 Ga0500616_0008211 3300053153 Bacteria 6511
283 Ga0500622_0000256 3300053156 Bacteria 54136
284 Ga0500624_000254 3300053157 Bacteria 18781
285 Ga0500636_0007316 3300053177 Bacteria 6382
286 Ga0500567_000272 3300053723 Bacteria 16060
287 Ga0500570_000350 3300053724 Bacteria 16874
288 Ga0500625_000004 3300053729 Bacteria 245905
289 2511130587 2510917021 Bacteria 5705459
290 2643950980 2643221588 Bacteria 3692460
291 2738712860 2738541275 Bacteria 4830863
292 2738851284 2738541301 Bacteria 4834102
293 2738867014 2738541304 Bacteria 4833665
294 2739299531 2738543022 Bacteria 4835059
295 2739361210 2738543033 Bacteria 4833336
296 2739650752 2739367664 Bacteria 4114334
297 2740029225 2739367865 Bacteria 4114482
298 2819551268 2818991438 Bacteria 5793701
299 2830075707 2830075706 Bacteria 3855215
300 2848298154 2848297114 Bacteria 3608511
301 2882809438 2882806704 Bacteria 3007728
302 2895881195 2895880812 Bacteria 11255272
303 2896186044 2896184354 Bacteria 3258548
304 2896255951 2896253425 Bacteria 3418029
305 2919143221 2919138771 Bacteria 5281312
306 2928104396 2928100450 Bacteria 4837635
307 2928963100 2928959182 Bacteria 4725774
308 3000867811 3000865235 Bacteria 3106258
309 8054303589 8054302542 Bacteria 5698134
310 Ga0065704_10070193
311 SwRhRL2b_contig_2535199
312 SwRhRL2b_contig_326334
313 JGI24749J21850_1000342
314 JGI24751J29686_10000365
315 Ga0065704_10070772
316 Ga0065704_10086213
317 Ga0070658_10000068
318 Ga0070670_100000024
319 Ga0070670_100000653
320 Ga0070666_10000054
321 Ga0070660_100006415
322 Ga0070661_100013897
323 Ga0070668_100000011
324 Ga0070668_100001305
325 Ga0070668_100009421
326 Ga0070668_100013160
327 Ga0070669_100000031
328 Ga0070669_100000052
329 Ga0070669_100000097
330 Ga0070669_100000227
331 Ga0070669_100001448
332 Ga0070675_100000168
333 Ga0070671_100000005
334 Ga0070671_100000041
335 Ga0070671_100000262
336 Ga0070671_100001269
337 Ga0070671_100003972
338 Ga0070659_100011045
339 Ga0070667_100000269
340 Ga0070667_100001585
341 Ga0070667_100002185
342 Ga0070667_100002952
343 Ga0070667_100011392
344 Ga0070667_100011612
345 Ga0070667_100012324
346 Ga0070662_100012242
347 Ga0070681_10062210
348 Ga0070679_100109814
349 Ga0068853_100002855
350 Ga0070665_100000079
351 Ga0070665_100005332
352 Ga0068855_100000667
353 Ga0070664_100013239
354 Ga0068857_100054079
355 Ga0068854_100001081
356 Ga0068854_100033009
357 Ga0068856_100021503
358 Ga0068852_100006681
359 Ga0068859_100000270
360 Ga0068859_100001606
361 Ga0068859_100021208
362 Ga0068859_100022991
363 Ga0068864_100000036
364 Ga0068861_100007836
365 Ga0068861_100041540
366 Ga0068863_100000090
367 Ga0068863_100000186
368 Ga0068863_100015637
369 Ga0068858_100002366
370 Ga0068858_100010829
371 Ga0068860_100000089
372 Ga0068860_100001847
373 Ga0068860_100018922
374 Ga0068862_100000043
375 Ga0068862_100002553
376 Ga0075368_10000845
377 Ga0075363_100017955
378 Ga0075432_10000082
379 Ga0075362_10000029
380 Ga0075369_10002435
381 Ga0075366_10000233
382 Ga0075370_10000011
383 Ga0097620_100000270
384 Ga0097620_100001606
385 Ga0097620_100021208
386 Ga0097620_100022991
387 Ga0105251_10003208
388 Ga0105240_10002141
389 Ga0105247_10000895
390 Ga0105248_10000081
391 Ga0105248_10012058
392 Ga0105248_10020935
393 Ga0105238_10008864
394 Ga0105249_10043050
395 Ga0157373_10025905
396 Ga0157371_10006044
397 Ga0157371_10009131
398 Ga0157369_10001048
399 Ga0163162_10001754
400 Ga0163162_10010472
401 Ga0157380_10000193
402 Ga0157380_10076205
403 Ga0163161_10002236
404 Ga0209050_1000937
405 Ga0207713_1000673
406 Ga0207713_1002484
407 Ga0207713_1021104
408 Ga0207680_10000183
409 Ga0207647_10023211
410 Ga0207705_10000124
411 Ga0207705_10005031
412 Ga0207695_10001916
413 Ga0207657_10000227
414 Ga0207652_10009509
415 Ga0207681_10000014
416 Ga0207681_10000030
417 Ga0207681_10000188
418 Ga0207681_10000241
419 Ga0207681_10000279
420 Ga0207650_10000015
421 Ga0207644_10000008
422 Ga0207644_10000017
423 Ga0207644_10000032
424 Ga0207644_10000167
425 Ga0207644_10016481
426 Ga0207690_10004763
427 Ga0207706_10021860
428 Ga0207711_10000162
429 Ga0207711_10006022
430 Ga0207667_10004514
431 Ga0207667_10006068
432 Ga0207668_10000034
433 Ga0207668_10006069
434 Ga0207668_10008170
435 Ga0207668_10008448
436 Ga0207640_10001262
437 Ga0207640_10005180
438 Ga0207658_10001181
439 Ga0207658_10001645
440 Ga0207658_10002271
441 Ga0207658_10006413
442 Ga0207703_10001806
443 Ga0207639_10005164
444 Ga0207678_10009107
445 Ga0207641_10000031
446 Ga0207641_10000069
447 Ga0207641_10001612
448 Ga0207641_10021126
449 Ga0207641_10022227
450 Ga0207676_10000021
451 Ga0207674_10029234
452 Ga0207674_10087255
453 Ga0207675_100001954
454 Ga0207698_10000067
455 Ga0209813_10000283
456 Ga0268266_10001007
457 Ga0268266_10001760
458 Ga0268266_10008710
459 Ga0268266_10060251
460 Ga0268265_10000013
461 Ga0268265_10000074
462 Ga0268265_10009154
463 Ga0268265_10066566
464 Ga0268264_10000160
465 Ga0268264_10000288
466 Ga0268264_10000785
467 Ga0268264_10004277
468 Ga0265331_10010714
469 Ga0307408_100011664
470 Ga0307508_10004107
471 Ga0307405_10000411
472 Ga0307413_10000406
473 Ga0307413_10003233
474 Ga0307410_10000260
475 Ga0307410_10008096
476 Ga0307410_10043757
477 Ga0307406_10005722
478 Ga0307407_10021142
479 Ga0307412_10001290
480 Ga0307412_10001536
481 Ga0307412_10008966
482 Ga0307414_10006569
483 Ga0307414_10009322
484 Ga0307414_10022836
485 Ga0307411_10000768
486 Ga0307411_10018867
487 Ga0316583_10002013
488 Ga0316582_0003282
489 Ga0439445_0000369
490 Ga0439462_0000298
491 Ga0453684_0185044
492 Ga0451576_0000024
493 Ga0495627_000507
494 Ga0495638_0000012
495 Ga0495650_0006232
496 Ga0495596_0000081
497 Ga0495596_0000154
498 Ga0495583_0023794
499 Ga0495606_0020599
500 Ga0495606_0038589
501 Ga0495610_0000015
502 Ga0495610_0001327
503 Ga0495610_0001618
504 Ga0495620_0019965
505 Ga0495632_0000770
506 Ga0495643_0001150
507 Ga0495643_0004801
508 Ga0495643_0013918
509 Ga0495609_0002324
510 Ga0495597_0008714
511 Ga0495668_0011598
512 Ga0495671_0007543
513 Ga0495687_026738
514 Ga0495681_0000062
515 Ga0495615_0000088
516 Ga0496101_0015638
517 Ga0496102_0001793
518 Ga0496103_0001294
519 Ga0496103_0026587
520 Ga0496104_0003016
521 Ga0496105_0000838
522 Ga0496105_0015587
523 Ga0496106_0000171
524 Ga0496107_0000853
525 Ga0496113_0024982
526 Ga0496113_0026654
527 Ga0496114_0043413
528 Ga0496116_0000045
529 Ga0496118_0023983
530 Ga0496118_0025075
531 Ga0496118_0036056
532 Ga0496119_0021095
533 Ga0496120_0002429
534 Ga0496121_0000017
535 Ga0496121_0001328
536 Ga0496121_0001456
537 Ga0496121_0041772
538 Ga0496121_0082483
539 Ga0496122_0000092
540 Ga0496122_0003264
541 Ga0496122_0003608
542 Ga0496123_0000089
543 Ga0496123_0001199
544 Ga0496123_0002307
545 Ga0496124_0001323
546 Ga0496124_0018750
547 Ga0496125_0015268
548 Ga0496125_0025305
549 Ga0496125_0029868
550 Ga0496126_0000568
551 Ga0496126_0001281
552 Ga0496126_0006831
553 Ga0501034_0013712
554 Ga0501223_000058
555 Ga0501224_000021
556 Ga0501235_002646
557 Ga0501225_0000022
558 Ga0501234_000595
559 Ga0501044_0002435
560 Ga0501226_000031
561 nmdc:mga03683_52_c1
562 nmdc:mga03683_61_c1
563 nmdc:mga00v17_1305_c1
564 nmdc:mga0k408_12_c1
565 nmdc:mga0k408_1890_c1
566 nmdc:mga06z11_221_c1
567 nmdc:mga04h51_104_c1
568 nmdc:mga07m45_11_c1
569 nmdc:mga07m45_130_c1
570 nmdc:mga07m45_9_c1
571 nmdc:mga06r32_8132_c1
572 nmdc:mga0sz30_1234_c1
573 nmdc:mga0sz30_190_c1
574 Ga0500643_000005
575 Ga0500643_000722
576 Ga0500643_001017
577 Ga0500643_004251
578 Ga0500556_0000037
579 Ga0500594_0003635
580 Ga0500607_000060
581 Ga0500607_000070
582 Ga0500608_000381
583 Ga0500618_006389
584 Ga0500642_0000002
585 Ga0500642_0003263
586 Ga0500655_000051
587 Ga0500559_0000547
588 Ga0500559_0001956
589 Ga0500559_0017503
590 Ga0500564_000226
591 Ga0500616_0008211
592 Ga0500622_0000256
593 Ga0500624_000254
594 Ga0500636_0007316
595 Ga0500567_000272
596 Ga0500570_000350
597 Ga0500625_000004
598 2511130587
599 2643950980
600 2738712860
601 2738851284
602 2738867014
603 2739299531
604 2739361210
605 2739650752
606 2740029225
607 2819551268
608 2830075707
609 2848298154
610 2882809438
611 2895881195
612 2896186044
613 2896255951
614 2919143221
615 2928104396
616 2928963100
617 3000867811
618 8054303589

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08494

DEAD_assoc

DEAD/H associated

649

830

0.97

PF19306

Lhr_WH

Helicase Lhr winged helix domain

431

602

0.93

PF00271

Helicase_C

Helicase conserved C-terminal domain

296

406

0.88

PF00270

DEAD

DEAD/DEAH box helicase

73

252

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
1t6n-assembly1.cif.gz_B crystal structure of the n-terminal domain of human uap56 0.8184 3 193
1vec-assembly1.cif.gz_A crystal structure of the n-terminal domain of rck/p54, a human dead-box protein 0.8086 4 192
3rrn-assembly1.cif.gz_A s. cerevisiae dbp5 l327v bound to gle1 h337r and ip6 0.7966 4 382
7bbb-assembly1.cif.gz_A solution structure of c-terminal reca and rrm domains of the dead box helicase dbpa 0.7937 222 381
2p6n-assembly1.cif.gz_A human dead-box rna helicase ddx41, helicase domain 0.7908 222 385
ID Description Score Start End Superfamily
af_Q9FT69_484_600_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8981 256 362 3.40.50.300
af_P30015_273_429_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8876 244 362 3.40.50.300
af_Q57742_242_404_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8802 222 384 3.40.50.300
af_A0A1P8BBA5_672_798_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8788 242 363 3.40.50.300
af_Q57742_242_404_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8699 222 384 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A5C8W5N2-F1-model_v4 DEAD/DEAH box helicase 0.9334 27 205 GO:0003677
GO:0004386
GO:0005524
GO:0016887
AF-A0A389MJ11-F1-model_v4 Helicase ATP-binding domain-containing protein 0.9328 39 205 GO:0003677
GO:0005524
GO:0016887
AF-A0A0X8WVZ5-F1-model_v4 deleted 0.8962 6 221
AF-A0A843IZS2-F1-model_v4 DEAD/DEAH box helicase 0.8949 4 191 GO:0003677
GO:0004386
GO:0005524
GO:0016887
GO:0071103
GO:0140097
AF-A0A3R7V899-F1-model_v4 DEAD/DEAH box helicase 0.8939 3 303 GO:0003677
GO:0004386
GO:0005524
GO:0016887

Map