F400910

General Info

Members Datasets Scaffolds Average Seq Length
310 227 620 322

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0001139|Ga0501032_0001139_12880_14007
Length 357
Sequence MGLKIGGIFGGGSIFALRIRSRAGTCHVLRDAFDGLASGAVDGAERLGYVCRIMRVIRIHATGGADRLQFEEVINFVDTYKRSGLYPVSLPHILGQEAAGVVSALGPDVTGFAVGDEVAGVNMGGAYAEETLAPAARLVRVPVGVTLETAAALLLQGLTAHYLATDTFPLRPGDTALVHAAAGGVGLLLVQLAKQRGVRVLATVGTEEKATLAREAGADEVCLYTREDFSVAARRFTEGRGVDVVYDAVGQSTFEGSLNSLRPRGMLVSYGNASGPVPPFSPLVLSQKGSLFLTRPSLGDYTQTPEELQMRAAELLEAVRSGALHVRIGARFPLAEAAAAHRALEGRKTTGKVLLVV

Samples

Sample ID Description Type Environment
1 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
5 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
6 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
7 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
8 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
9 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
10 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
11 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
20 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
21 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
22 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
23 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
24 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
25 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
51 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
56 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
57 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
58 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
69 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
75 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
76 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
78 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
120 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
123 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
124 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
125 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
126 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
127 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
128 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
129 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
130 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
131 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
132 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
133 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
134 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
135 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
136 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
137 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
138 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
139 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
140 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
141 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
142 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
143 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
144 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
145 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
146 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
147 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
148 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
149 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
150 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
151 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
152 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
153 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
154 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
155 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
156 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
157 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
158 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
159 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
160 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
161 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
162 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
163 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
164 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
165 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
166 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
167 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
168 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
169 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
170 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
171 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
172 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
173 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
174 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
175 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
176 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
177 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
178 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
179 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
180 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
181 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
182 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
183 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
184 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
185 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
186 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
187 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
188 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
189 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
190 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
191 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
192 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
193 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
194 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
195 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
196 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
197 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
198 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
199 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
200 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
201 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
202 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
203 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
204 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
205 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
206 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
207 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
208 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
209 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
210 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
211 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
212 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
213 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
214 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
215 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
216 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
217 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
218 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
219 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
220 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
221 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
222 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
223 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
224 2643221629 Devosia sp. Root105 Isolate Unclassified
225 2643221662 Devosia sp. Root413D1 Isolate Unclassified
226 2806310737 Pseudomonas mosselii BS011 Isolate Unclassified
227 2806310745 Pseudomonas mosselii PtA1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.39
Metatranscriptomes 0.32
Isolates 1.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.45
Nodule 0
Rhizoplane 3.55
Rhizosphere 86.13
Stem 0
Stem Tuber 0
Unclassified 2.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501032_0001139 3300049569 Bacteria 21277
2 JGI25152J39213_1000440 3300002773 Bacteria 24791
3 rootL2_10323218 3300003322 Unclassified 1626
4 JGI25161J50226_1000889 3300003374 Bacteria 10855
5 Ga0055526_1003228 3300003771 Bacteria 10511
6 Ga0055537_1002947 3300003773 Bacteria 5408
7 Ga0055524_1003734 3300003775 Bacteria 7280
8 Ga0055524_1006010 3300003775 Bacteria 5330
9 Ga0055530_10002241 3300003791 Bacteria 12731
10 Ga0055543_1001646 3300004625 Bacteria 8509
11 Ga0065165_1002807 3300005262 Bacteria 13663
12 Ga0065707_10130339 3300005295 Bacteria 1931
13 Ga0070658_10032157 3300005327 Bacteria 4219
14 Ga0070683_100000270 3300005329 Bacteria 35707
15 Ga0070683_100040626 3300005329 Bacteria 4277
16 Ga0070670_100001575 3300005331 Bacteria 18384
17 Ga0070666_10011263 3300005335 Bacteria 5610
18 Ga0070666_10019248 3300005335 Bacteria 4404
19 Ga0070680_100005215 3300005336 Bacteria 9831
20 Ga0070680_100042734 3300005336 Bacteria 3679
21 Ga0070680_100225709 3300005336 Bacteria 1581
22 Ga0070682_100180713 3300005337 Bacteria 1473
23 Ga0070660_100028389 3300005339 Bacteria 4186
24 Ga0070689_100321562 3300005340 Bacteria 1292
25 Ga0070691_10000252 3300005341 Bacteria 18503
26 Ga0070661_100140240 3300005344 Bacteria 1821
27 Ga0070668_100219458 3300005347 Bacteria 1567
28 Ga0070668_100250178 3300005347 Bacteria 1471
29 Ga0070675_100013927 3300005354 Bacteria 6329
30 Ga0070675_100075523 3300005354 Bacteria 2802
31 Ga0070671_100008073 3300005355 Bacteria 8427
32 Ga0070674_100301836 3300005356 Bacteria 1277
33 Ga0070659_100003399 3300005366 Bacteria 11338
34 Ga0070667_100180656 3300005367 Bacteria 1866
35 Ga0070708_100001351 3300005445 Bacteria 18740
36 Ga0070678_100191704 3300005456 Bacteria 1681
37 Ga0070662_100028514 3300005457 Bacteria 3885
38 Ga0070681_10001619 3300005458 Bacteria 20054
39 Ga0070699_100229780 3300005518 Bacteria 1654
40 Ga0070679_100000460 3300005530 Bacteria 34597
41 Ga0070679_100029347 3300005530 Bacteria 5427
42 Ga0070684_100000429 3300005535 Bacteria 28837
43 Ga0070697_100038017 3300005536 Bacteria 3888
44 Ga0068853_100005873 3300005539 Bacteria 9676
45 Ga0070672_100012464 3300005543 Bacteria 5969
46 Ga0070672_100030167 3300005543 Bacteria 4071
47 Ga0070672_100092384 3300005543 Bacteria 2443
48 Ga0070665_100007681 3300005548 Bacteria 10953
49 Ga0070665_100087530 3300005548 Bacteria 3120
50 Ga0068855_100016379 3300005563 Bacteria 8912
51 Ga0070664_100008909 3300005564 Bacteria 8132
52 Ga0068857_100006510 3300005577 Bacteria 10021
53 Ga0068856_100001812 3300005614 Bacteria 22314
54 Ga0068856_100322728 3300005614 Bacteria 1561
55 Ga0068852_100004085 3300005616 Bacteria 10270
56 Ga0068852_100448022 3300005616 Bacteria 1277
57 Ga0068864_100003082 3300005618 Bacteria 13762
58 Ga0068864_100078576 3300005618 Bacteria 2888
59 Ga0068864_100216894 3300005618 Bacteria 1764
60 Ga0068861_100265949 3300005719 Unclassified 1470
61 Ga0068863_100037818 3300005841 Bacteria 4593
62 Ga0068860_100020664 3300005843 Bacteria 6378
63 Ga0081455_10027119 3300005937 Bacteria 5253
64 Ga0081539_10016900 3300005985 Bacteria 5171
65 Ga0075363_100019815 3300006048 Bacteria 3368
66 Ga0070716_100026214 3300006173 Bacteria 3120
67 Ga0097621_100020822 3300006237 Bacteria 5061
68 Ga0075428_100086608 3300006844 Bacteria 3417
69 Ga0075428_100090495 3300006844 Bacteria 3338
70 Ga0075431_100118253 3300006847 Bacteria 2735
71 Ga0075434_100017995 3300006871 Bacteria 6819
72 Ga0075429_100004915 3300006880 Bacteria 11519
73 Ga0075436_100009323 3300006914 Bacteria 6713
74 Ga0075435_100111868 3300007076 Bacteria 2272
75 Ga0105240_10019708 3300009093 Bacteria 9008
76 Ga0111539_10031238 3300009094 Bacteria 6471
77 Ga0105241_10000191 3300009174 Bacteria 45983
78 Ga0105241_10003170 3300009174 Bacteria 12241
79 Ga0105242_10078196 3300009176 Unclassified 2761
80 Ga0105248_10003753 3300009177 Bacteria 16834
81 Ga0105248_10253952 3300009177 Bacteria 1979
82 Ga0105248_10465637 3300009177 Bacteria 1425
83 Ga0105237_10018263 3300009545 Bacteria 7257
84 Ga0105237_10037636 3300009545 Bacteria 4888
85 Ga0105238_10002619 3300009551 Bacteria 17943
86 Ga0105028_102756 3300009993 Bacteria 1848
87 Ga0105239_10001006 3300010375 Bacteria 39492
88 Ga0157371_10170254 3300013102 Bacteria 1556
89 Ga0157370_10006354 3300013104 Bacteria 13050
90 Ga0157369_10001252 3300013105 Bacteria 31596
91 Ga0157369_10206545 3300013105 Bacteria 2060
92 Ga0157378_10287015 3300013297 Bacteria 1588
93 Ga0157372_10003563 3300013307 Bacteria 16762
94 Ga0157375_10208419 3300013308 Bacteria 2111
95 Ga0157380_10298383 3300014326 Bacteria 1483
96 Ga0209436_100800 3300025208 Bacteria 12930
97 Ga0209565_1006361 3300025263 Bacteria 3320
98 Ga0209565_1010528 3300025263 Bacteria 2289
99 Ga0209130_1000549 3300025284 Bacteria 37476
100 Ga0209675_1002362 3300025291 Bacteria 9742
101 Ga0209564_1000134 3300025295 Bacteria 188346
102 Ga0209050_1000092 3300025298 Bacteria 252702
103 Ga0209256_1001563 3300025299 Bacteria 22548
104 Ga0207647_10000517 3300025904 Bacteria 30788
105 Ga0207699_10246478 3300025906 Bacteria 1230
106 Ga0207705_10009533 3300025909 Bacteria 7064
107 Ga0207654_10000075 3300025911 Bacteria 65108
108 Ga0207654_10003739 3300025911 Bacteria 7680
109 Ga0207707_10000710 3300025912 Bacteria 33104
110 Ga0207695_10000736 3300025913 Bacteria 63434
111 Ga0207671_10025654 3300025914 Bacteria 4425
112 Ga0207660_10126855 3300025917 Bacteria 1938
113 Ga0207662_10033585 3300025918 Bacteria 2991
114 Ga0207657_10012595 3300025919 Bacteria 8336
115 Ga0207652_10001452 3300025921 Bacteria 20972
116 Ga0207652_10029185 3300025921 Bacteria 4609
117 Ga0207681_10156067 3300025923 Bacteria 1715
118 Ga0207694_10000519 3300025924 Bacteria 34909
119 Ga0207650_10011477 3300025925 Bacteria 6099
120 Ga0207659_10005465 3300025926 Bacteria 7704
121 Ga0207644_10006464 3300025931 Bacteria 7640
122 Ga0207644_10007466 3300025931 Bacteria 7129
123 Ga0207706_10003259 3300025933 Bacteria 15545
124 Ga0207670_10275228 3300025936 Bacteria 1310
125 Ga0207665_10039989 3300025939 Bacteria 3127
126 Ga0207691_10006900 3300025940 Bacteria 10952
127 Ga0207691_10011264 3300025940 Bacteria 8580
128 Ga0207691_10077970 3300025940 Bacteria 2983
129 Ga0207711_10038306 3300025941 Bacteria 4076
130 Ga0207711_10318665 3300025941 Bacteria 1436
131 Ga0207661_10000942 3300025944 Bacteria 19151
132 Ga0207679_10024428 3300025945 Bacteria 4143
133 Ga0207679_10177214 3300025945 Bacteria 1761
134 Ga0207679_10382439 3300025945 Bacteria 1234
135 Ga0207667_10000286 3300025949 Bacteria 69623
136 Ga0207667_10028808 3300025949 Bacteria 6029
137 Ga0207651_10063278 3300025960 Bacteria 2583
138 Ga0207712_10000572 3300025961 Bacteria 29742
139 Ga0207668_10101441 3300025972 Bacteria 2139
140 Ga0207668_10173344 3300025972 Bacteria 1694
141 Ga0207668_10207799 3300025972 Bacteria 1564
142 Ga0207658_10121922 3300025986 Bacteria 2080
143 Ga0207658_10338715 3300025986 Bacteria 1307
144 Ga0207639_10010804 3300026041 Bacteria 6329
145 Ga0207702_10002807 3300026078 Bacteria 16307
146 Ga0207641_10028786 3300026088 Bacteria 4593
147 Ga0207648_10054941 3300026089 Bacteria 3477
148 Ga0207676_10063464 3300026095 Bacteria 2934
149 Ga0207676_10265340 3300026095 Bacteria 1552
150 Ga0207674_10000598 3300026116 Bacteria 47476
151 Ga0207675_100042723 3300026118 Bacteria 4233
152 Ga0207675_100538959 3300026118 Bacteria 1165
153 Ga0207683_10195547 3300026121 Bacteria 1837
154 Ga0207698_10005665 3300026142 Bacteria 7735
155 Ga0207428_10047095 3300027907 Bacteria 3464
156 Ga0268266_10047956 3300028379 Bacteria 3661
157 Ga0268266_10182993 3300028379 Bacteria 1909
158 Ga0268264_10012113 3300028381 Bacteria 7100
159 Ga0307515_10084772 3300028794 Bacteria 4064
160 Ga0307511_10015071 3300030521 Bacteria 7500
161 Ga0265762_1006892 3300030760 Bacteria 2030
162 Ga0265320_10029704 3300031240 Bacteria 2826
163 Ga0265340_10035428 3300031247 Bacteria 2478
164 Ga0265331_10068399 3300031250 Bacteria 1665
165 Ga0265327_10009550 3300031251 Bacteria 6980
166 Ga0265327_10042583 3300031251 Bacteria 2436
167 Ga0307513_10040824 3300031456 Bacteria 5127
168 Ga0307408_100000094 3300031548 Bacteria 97519
169 Ga0307408_100003675 3300031548 Bacteria 10457
170 Ga0307408_100096668 3300031548 Bacteria 2242
171 Ga0307408_100130112 3300031548 Bacteria 1962
172 Ga0265313_10003575 3300031595 Bacteria 12501
173 Ga0265313_10033914 3300031595 Bacteria 2588
174 Ga0307405_10001919 3300031731 Bacteria 8954
175 Ga0316577_10165397 3300031733 Bacteria 1248
176 Ga0307413_10009399 3300031824 Bacteria 4676
177 Ga0307413_10143673 3300031824 Bacteria 1652
178 Ga0307406_10015659 3300031901 Bacteria 4394
179 Ga0307407_10200433 3300031903 Bacteria 1337
180 Ga0307412_10044920 3300031911 Bacteria 2885
181 Ga0307412_10135110 3300031911 Bacteria 1798
182 Ga0307409_100004164 3300031995 Bacteria 8055
183 Ga0307414_10028693 3300032004 Bacteria 3612
184 Ga0307411_10090888 3300032005 Bacteria 2131
185 Ga0373934_0013217 3300035086 Bacteria 3120
186 Ga0373932_0046251 3300035112 Bacteria 1275
187 Ga0373954_0006347 3300035118 Bacteria 5155
188 Ga0316574_0020761 3300035398 Bacteria 3891
189 Ga0316574_0128689 3300035398 Bacteria 1628
190 Ga0373927_0018768 3300035695 Bacteria 4537
191 Ga0373947_0032733 3300035725 Bacteria 3066
192 Ga0373937_0089499 3300036401 Bacteria 2850
193 Ga0316584_0007636 3300036712 Bacteria 7419
194 Ga0316584_0284421 3300036712 Bacteria 1201
195 Ga0395899_0003103 3300037312 Bacteria 13225
196 Ga0395899_0044418 3300037312 Bacteria 3311
197 Ga0395899_0268735 3300037312 Bacteria 1164
198 Ga0395900_0033158 3300037418 Bacteria 5315
199 Ga0395900_0040717 3300037418 Bacteria 4788
200 Ga0395900_0125213 3300037418 Bacteria 2635
201 Ga0395905_0032725 3300037471 Bacteria 4887
202 Ga0395905_0040409 3300037471 Bacteria 4375
203 Ga0395905_0144347 3300037471 Bacteria 2239
204 Ga0395905_0361544 3300037471 Bacteria 1344
205 Ga0436364_0774344 3300037853 Bacteria 5906
206 Ga0436364_1440480 3300037853 Bacteria 5787
207 Ga0395901_0006034 3300038443 Bacteria 12278
208 Ga0395901_0104510 3300038443 Bacteria 2972
209 Ga0395901_0215310 3300038443 Bacteria 2009
210 Ga0439449_0102432 3300042007 Bacteria 1059
211 Ga0450920_021379 3300042122 Bacteria 1251
212 Ga0451577_0307969 3300042876 Bacteria 1435
213 Ga0453683_0000918 3300044673 Bacteria 28106
214 Ga0453683_0001153 3300044673 Bacteria 23986
215 Ga0453683_0017368 3300044673 Bacteria 4632
216 Ga0466961_0101260 3300044693 Bacteria 1815
217 Ga0466963_0048062 3300044694 Bacteria 2817
218 Ga0453684_0015785 3300044712 Bacteria 11882
219 Ga0466957_0212283 3300044842 Bacteria 1275
220 Ga0466960_0006979 3300044901 Bacteria 4562
221 Ga0451576_0001830 3300045051 Bacteria 34523
222 Ga0451576_0018774 3300045051 Bacteria 7561
223 Ga0451576_0258355 3300045051 Bacteria 1820
224 Ga0495653_0004196 3300046463 Bacteria 11666
225 Ga0495580_0004563 3300046472 Bacteria 11626
226 Ga0495580_0023000 3300046472 Bacteria 4582
227 Ga0495580_0029248 3300046472 Bacteria 4000
228 Ga0495582_0011127 3300046473 Bacteria 4954
229 Ga0495662_0081669 3300046476 Bacteria 1572
230 Ga0495664_0029093 3300046477 Bacteria 3229
231 Ga0495664_0095457 3300046477 Bacteria 1790
232 Ga0495594_0020921 3300046499 Unclassified 3489
233 Ga0495630_0009946 3300046517 Bacteria 6849
234 Ga0495666_0073046 3300046526 Bacteria 1628
235 Ga0495665_0006220 3300046531 Bacteria 6447
236 Ga0495665_0082138 3300046531 Bacteria 1694
237 Ga0495586_0005723 3300046535 Bacteria 6651
238 Ga0495586_0020823 3300046535 Bacteria 3493
239 Ga0495634_0011590 3300046642 Bacteria 6413
240 Ga0495634_0240365 3300046642 Bacteria 1111
241 Ga0495611_0024128 3300046648 Bacteria 2644
242 Ga0495646_0006308 3300046680 Bacteria 7523
243 Ga0495647_0001451 3300046681 Bacteria 7340
244 Ga0495669_0027041 3300046684 Bacteria 2508
245 Ga0495669_0108320 3300046684 Bacteria 1295
246 Ga0495613_0120592 3300046689 Bacteria 1883
247 Ga0495671_0014084 3300046692 Bacteria 4312
248 Ga0495674_0037016 3300047319 Bacteria 4386
249 Ga0495672_0123586 3300047320 Bacteria 1372
250 Ga0495676_0017089 3300047321 Bacteria 6419
251 Ga0495676_0030119 3300047321 Bacteria 4611
252 Ga0495680_0119317 3300047322 Bacteria 1948
253 Ga0495687_001386 3300047443 Bacteria 22379
254 Ga0495593_0003704 3300047673 Bacteria 9126
255 Ga0495614_0027420 3300048089 Bacteria 2456
256 Ga0496100_0091878 3300048903 Bacteria 2073
257 Ga0496102_0486992 3300048905 Bacteria 1155
258 Ga0496108_0003756 3300048911 Bacteria 12169
259 Ga0496109_0010806 3300048912 Bacteria 7816
260 Ga0496109_0079735 3300048912 Bacteria 3016
261 Ga0496110_0015835 3300048913 Bacteria 6287
262 Ga0496111_0093804 3300048914 Bacteria 2201
263 Ga0496111_0105831 3300048914 Bacteria 2070
264 Ga0496112_0247458 3300048915 Bacteria 1734
265 Ga0496113_0024576 3300048916 Bacteria 4284
266 Ga0496113_0054570 3300048916 Bacteria 2991
267 Ga0496116_0011948 3300048919 Unclassified 7135
268 Ga0496122_0163026 3300048925 Unclassified 1356
269 Ga0501031_0051720 3300049568 Bacteria 2676
270 Ga0501032_0208856 3300049569 Bacteria 1273
271 Ga0501033_0003521 3300049570 Bacteria 12816
272 Ga0501033_0065985 3300049570 Bacteria 2662
273 Ga0501033_0126440 3300049570 Bacteria 1853
274 Ga0501034_0016743 3300049571 Bacteria 7516
275 Ga0501034_0098344 3300049571 Bacteria 2922
276 Ga0501034_0110891 3300049571 Bacteria 2734
277 Ga0501034_0215419 3300049571 Bacteria 1874
278 Ga0501040_0058887 3300049576 Bacteria 2639
279 Ga0501042_0039666 3300049578 Bacteria 3347
280 Ga0501046_0020612 3300049580 Bacteria 5450
281 Ga0501046_0027834 3300049580 Bacteria 4607
282 Ga0501047_0005114 3300049581 Bacteria 12306
283 Ga0501047_0076939 3300049581 Bacteria 3211
284 Ga0501047_0108554 3300049581 Bacteria 2657
285 Ga0501047_0353202 3300049581 Bacteria 1306
286 Ga0501074_0049314 3300049590 Bacteria 3040
287 Ga0501076_0119542 3300049592 Bacteria 2133
288 Ga0501077_0274741 3300049593 Bacteria 1072
289 Ga0501080_0479935 3300049742 Bacteria 1112
290 Ga0501083_0179120 3300049744 Bacteria 1384
291 Ga0501035_0037588 3300049822 Bacteria 4383
292 Ga0501035_0045617 3300049822 Bacteria 3943
293 Ga0501044_0005632 3300049823 Bacteria 13905
294 Ga0501044_0074999 3300049823 Bacteria 3435
295 Ga0501045_0249290 3300049824 Bacteria 1322
296 nmdc:mga05p37_46229_c1 3300050507 Bacteria 5353
297 nmdc:mga09592_6265_c1 3300050508 Bacteria 9686
298 nmdc:mga0qj67_156192_c1 3300050509 Unclassified 1852
299 nmdc:mga06r32_38292_c1 3300050510 Bacteria 4542
300 nmdc:mga0n895_364_c1 3300050512 Bacteria 30516
301 nmdc:mga08x19_20885_c1 3300050514 Bacteria 4036
302 nmdc:mga0a205_326822_c1 3300050515 Bacteria 1404
303 Ga0500556_0001542 3300053104 Bacteria 9418
304 Ga0500616_0013315 3300053153 Bacteria 4782
305 Ga0501084_0057401 3300054114 Bacteria 3258
306 Ga0501082_0231617 3300060353 Bacteria 1607
307 2644166126 2643221629 Bacteria 5850260
308 2644346867 2643221662 Bacteria 5851492
309 2807405811 2806310737 Bacteria 5751088
310 2807454146 2806310745 Bacteria 5742165
311 Ga0501032_0001139
312 JGI25152J39213_1000440
313 rootL2_10323218
314 JGI25161J50226_1000889
315 Ga0055526_1003228
316 Ga0055537_1002947
317 Ga0055524_1003734
318 Ga0055524_1006010
319 Ga0055530_10002241
320 Ga0055543_1001646
321 Ga0065165_1002807
322 Ga0065707_10130339
323 Ga0070658_10032157
324 Ga0070683_100000270
325 Ga0070683_100040626
326 Ga0070670_100001575
327 Ga0070666_10011263
328 Ga0070666_10019248
329 Ga0070680_100005215
330 Ga0070680_100042734
331 Ga0070680_100225709
332 Ga0070682_100180713
333 Ga0070660_100028389
334 Ga0070689_100321562
335 Ga0070691_10000252
336 Ga0070661_100140240
337 Ga0070668_100219458
338 Ga0070668_100250178
339 Ga0070675_100013927
340 Ga0070675_100075523
341 Ga0070671_100008073
342 Ga0070674_100301836
343 Ga0070659_100003399
344 Ga0070667_100180656
345 Ga0070708_100001351
346 Ga0070678_100191704
347 Ga0070662_100028514
348 Ga0070681_10001619
349 Ga0070699_100229780
350 Ga0070679_100000460
351 Ga0070679_100029347
352 Ga0070684_100000429
353 Ga0070697_100038017
354 Ga0068853_100005873
355 Ga0070672_100012464
356 Ga0070672_100030167
357 Ga0070672_100092384
358 Ga0070665_100007681
359 Ga0070665_100087530
360 Ga0068855_100016379
361 Ga0070664_100008909
362 Ga0068857_100006510
363 Ga0068856_100001812
364 Ga0068856_100322728
365 Ga0068852_100004085
366 Ga0068852_100448022
367 Ga0068864_100003082
368 Ga0068864_100078576
369 Ga0068864_100216894
370 Ga0068861_100265949
371 Ga0068863_100037818
372 Ga0068860_100020664
373 Ga0081455_10027119
374 Ga0081539_10016900
375 Ga0075363_100019815
376 Ga0070716_100026214
377 Ga0097621_100020822
378 Ga0075428_100086608
379 Ga0075428_100090495
380 Ga0075431_100118253
381 Ga0075434_100017995
382 Ga0075429_100004915
383 Ga0075436_100009323
384 Ga0075435_100111868
385 Ga0105240_10019708
386 Ga0111539_10031238
387 Ga0105241_10000191
388 Ga0105241_10003170
389 Ga0105242_10078196
390 Ga0105248_10003753
391 Ga0105248_10253952
392 Ga0105248_10465637
393 Ga0105237_10018263
394 Ga0105237_10037636
395 Ga0105238_10002619
396 Ga0105028_102756
397 Ga0105239_10001006
398 Ga0157371_10170254
399 Ga0157370_10006354
400 Ga0157369_10001252
401 Ga0157369_10206545
402 Ga0157378_10287015
403 Ga0157372_10003563
404 Ga0157375_10208419
405 Ga0157380_10298383
406 Ga0209436_100800
407 Ga0209565_1006361
408 Ga0209565_1010528
409 Ga0209130_1000549
410 Ga0209675_1002362
411 Ga0209564_1000134
412 Ga0209050_1000092
413 Ga0209256_1001563
414 Ga0207647_10000517
415 Ga0207699_10246478
416 Ga0207705_10009533
417 Ga0207654_10000075
418 Ga0207654_10003739
419 Ga0207707_10000710
420 Ga0207695_10000736
421 Ga0207671_10025654
422 Ga0207660_10126855
423 Ga0207662_10033585
424 Ga0207657_10012595
425 Ga0207652_10001452
426 Ga0207652_10029185
427 Ga0207681_10156067
428 Ga0207694_10000519
429 Ga0207650_10011477
430 Ga0207659_10005465
431 Ga0207644_10006464
432 Ga0207644_10007466
433 Ga0207706_10003259
434 Ga0207670_10275228
435 Ga0207665_10039989
436 Ga0207691_10006900
437 Ga0207691_10011264
438 Ga0207691_10077970
439 Ga0207711_10038306
440 Ga0207711_10318665
441 Ga0207661_10000942
442 Ga0207679_10024428
443 Ga0207679_10177214
444 Ga0207679_10382439
445 Ga0207667_10000286
446 Ga0207667_10028808
447 Ga0207651_10063278
448 Ga0207712_10000572
449 Ga0207668_10101441
450 Ga0207668_10173344
451 Ga0207668_10207799
452 Ga0207658_10121922
453 Ga0207658_10338715
454 Ga0207639_10010804
455 Ga0207702_10002807
456 Ga0207641_10028786
457 Ga0207648_10054941
458 Ga0207676_10063464
459 Ga0207676_10265340
460 Ga0207674_10000598
461 Ga0207675_100042723
462 Ga0207675_100538959
463 Ga0207683_10195547
464 Ga0207698_10005665
465 Ga0207428_10047095
466 Ga0268266_10047956
467 Ga0268266_10182993
468 Ga0268264_10012113
469 Ga0307515_10084772
470 Ga0307511_10015071
471 Ga0265762_1006892
472 Ga0265320_10029704
473 Ga0265340_10035428
474 Ga0265331_10068399
475 Ga0265327_10009550
476 Ga0265327_10042583
477 Ga0307513_10040824
478 Ga0307408_100000094
479 Ga0307408_100003675
480 Ga0307408_100096668
481 Ga0307408_100130112
482 Ga0265313_10003575
483 Ga0265313_10033914
484 Ga0307405_10001919
485 Ga0316577_10165397
486 Ga0307413_10009399
487 Ga0307413_10143673
488 Ga0307406_10015659
489 Ga0307407_10200433
490 Ga0307412_10044920
491 Ga0307412_10135110
492 Ga0307409_100004164
493 Ga0307414_10028693
494 Ga0307411_10090888
495 Ga0373934_0013217
496 Ga0373932_0046251
497 Ga0373954_0006347
498 Ga0316574_0020761
499 Ga0316574_0128689
500 Ga0373927_0018768
501 Ga0373947_0032733
502 Ga0373937_0089499
503 Ga0316584_0007636
504 Ga0316584_0284421
505 Ga0395899_0003103
506 Ga0395899_0044418
507 Ga0395899_0268735
508 Ga0395900_0033158
509 Ga0395900_0040717
510 Ga0395900_0125213
511 Ga0395905_0032725
512 Ga0395905_0040409
513 Ga0395905_0144347
514 Ga0395905_0361544
515 Ga0436364_0774344
516 Ga0436364_1440480
517 Ga0395901_0006034
518 Ga0395901_0104510
519 Ga0395901_0215310
520 Ga0439449_0102432
521 Ga0450920_021379
522 Ga0451577_0307969
523 Ga0453683_0000918
524 Ga0453683_0001153
525 Ga0453683_0017368
526 Ga0466961_0101260
527 Ga0466963_0048062
528 Ga0453684_0015785
529 Ga0466957_0212283
530 Ga0466960_0006979
531 Ga0451576_0001830
532 Ga0451576_0018774
533 Ga0451576_0258355
534 Ga0495653_0004196
535 Ga0495580_0004563
536 Ga0495580_0023000
537 Ga0495580_0029248
538 Ga0495582_0011127
539 Ga0495662_0081669
540 Ga0495664_0029093
541 Ga0495664_0095457
542 Ga0495594_0020921
543 Ga0495630_0009946
544 Ga0495666_0073046
545 Ga0495665_0006220
546 Ga0495665_0082138
547 Ga0495586_0005723
548 Ga0495586_0020823
549 Ga0495634_0011590
550 Ga0495634_0240365
551 Ga0495611_0024128
552 Ga0495646_0006308
553 Ga0495647_0001451
554 Ga0495669_0027041
555 Ga0495669_0108320
556 Ga0495613_0120592
557 Ga0495671_0014084
558 Ga0495674_0037016
559 Ga0495672_0123586
560 Ga0495676_0017089
561 Ga0495676_0030119
562 Ga0495680_0119317
563 Ga0495687_001386
564 Ga0495593_0003704
565 Ga0495614_0027420
566 Ga0496100_0091878
567 Ga0496102_0486992
568 Ga0496108_0003756
569 Ga0496109_0010806
570 Ga0496109_0079735
571 Ga0496110_0015835
572 Ga0496111_0093804
573 Ga0496111_0105831
574 Ga0496112_0247458
575 Ga0496113_0024576
576 Ga0496113_0054570
577 Ga0496116_0011948
578 Ga0496122_0163026
579 Ga0501031_0051720
580 Ga0501032_0208856
581 Ga0501033_0003521
582 Ga0501033_0065985
583 Ga0501033_0126440
584 Ga0501034_0016743
585 Ga0501034_0098344
586 Ga0501034_0110891
587 Ga0501034_0215419
588 Ga0501040_0058887
589 Ga0501042_0039666
590 Ga0501046_0020612
591 Ga0501046_0027834
592 Ga0501047_0005114
593 Ga0501047_0076939
594 Ga0501047_0108554
595 Ga0501047_0353202
596 Ga0501074_0049314
597 Ga0501076_0119542
598 Ga0501077_0274741
599 Ga0501080_0479935
600 Ga0501083_0179120
601 Ga0501035_0037588
602 Ga0501035_0045617
603 Ga0501044_0005632
604 Ga0501044_0074999
605 Ga0501045_0249290
606 nmdc:mga05p37_46229_c1
607 nmdc:mga09592_6265_c1
608 nmdc:mga0qj67_156192_c1
609 nmdc:mga06r32_38292_c1
610 nmdc:mga0n895_364_c1
611 nmdc:mga08x19_20885_c1
612 nmdc:mga0a205_326822_c1
613 Ga0500556_0001542
614 Ga0500616_0013315
615 Ga0501084_0057401
616 Ga0501082_0231617
617 2644166126
618 2644346867
619 2807405811
620 2807454146

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

71

143

0.9

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

184

317

0.89

PF13602

ADH_zinc_N_2

Zinc-binding dehydrogenase

216

355

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
1qor-assembly1.cif.gz_B crystal structure of escherichia coli quinone oxidoreductase complexed with nadph 0.9887 3 324
3jyl-assembly1.cif.gz_A crystal structures of pseudomonas syringae pv. tomato dc3000 quinone oxidoreductase 0.9814 1 324
1qor-assembly1.cif.gz_B crystal structure of escherichia coli quinone oxidoreductase complexed with nadph 0.9797 3 324
3jyl-assembly1.cif.gz_A crystal structures of pseudomonas syringae pv. tomato dc3000 quinone oxidoreductase 0.9784 1 324
4rvu-assembly2.cif.gz_C the native structure of mycobacterial rv1454c complexed with nadph 0.9726 3 324
ID Description Score Start End Superfamily
af_I1LVH0_176_320_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9934 124 268 3.40.50.720
af_Q336S6_1_326_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9902 2 324 3.90.180.10
af_P28304_2_327_2.170.150.20 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Peptide methionine sulfoxide reductase. 0.9888 3 324 2.170.150.20
af_P28304_1_127_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9848 1 125 3.90.180.10
af_A0A0R0I1N1_1_153_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9822 1 134 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A2V8TX75-F1-model_v4 Quinone oxidoreductase 0.9972 1 141 GO:0003960
GO:0005829
GO:0035925
GO:0070402
AF-A0A7U7GCB8-F1-model_v4 Quinone oxidoreductase, NADPH-dependent (EC 1.6.5.5) 0.9967 1 324 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402
AF-A0A536V2R0-F1-model_v4 Zinc-binding dehydrogenase 0.9945 137 324 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402
AF-A0A7U7GCB8-F1-model_v4 Quinone oxidoreductase, NADPH-dependent (EC 1.6.5.5) 0.9936 1 324 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402
AF-A0A0K0Y339-F1-model_v4 Quinone oxidoreductase 1 (EC 1.6.5.5) 0.9922 2 324 GO:0003960
GO:0005829
GO:0035925
GO:0070402

Map