F401095

General Info

Members Datasets Scaffolds Average Seq Length
311 175 622 314

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100068721|Ga0070708_1000687214
Length 339
Sequence MNAVEKVKKVEKAKNGAAHKSGFVAVVGRPNAGKSTLVNRLVGQKIAIVTSKPQTTRNRIQGIVSNENAQVVLIDTPGLHDAKTALNKQMMREVAAALEGIDVLVLMVDATILNSGFGSLPAQAGTNPEARAHVDNLLMDKSKRFVGKTILVLNKIDKLPRPKLAPLLETFGKAQDFAAIVPVSAMKGEGCDALMDEVVKLLPEGAAYFPEDQVTDQPERFLASEIVREKAIALTYHEVPHALAVTVEKWEETPKLLRIEMTLTVERASQKKILIGRKGDMLKKIGTQARIELEEILNAKIYLGLFVKVAENWRENPMAVRELDWHTQMEALSENEDDK

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
54 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
55 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
56 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
57 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
78 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
79 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
80 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
81 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
82 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
83 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
84 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
85 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
88 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
89 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
90 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
91 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
92 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
93 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
94 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
95 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
96 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
99 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
100 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
101 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
102 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
103 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
104 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
105 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
106 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
107 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
108 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
109 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
110 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
111 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
112 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
113 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
114 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
115 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
116 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
117 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
120 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
121 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
122 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
123 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
124 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
125 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
126 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
127 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
128 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
129 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
130 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
131 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
132 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
133 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
134 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
135 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
136 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
137 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
138 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
139 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
140 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
141 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
142 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
143 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
144 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
145 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
146 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
147 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
148 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
149 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
150 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
151 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
152 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
153 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
154 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
155 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
156 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
157 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
158 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
159 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
160 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
161 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
162 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
164 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
165 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
166 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
167 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
168 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
169 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
170 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
171 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
172 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
173 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
174 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
175 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.36
Metatranscriptomes 0.64
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.25
Nodule 0
Rhizoplane 0.64
Rhizosphere 96.46
Stem 0
Stem Tuber 0
Unclassified 9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100068721 3300005445 Bacteria 3184
2 JGI25162J39368_1001493 3300002737 Bacteria 12196
3 JGI25164J39214_1001768 3300002772 Bacteria 4228
4 JGI25165J46597_1001232 3300003214 Bacteria 15203
5 Ga0070703_10001018 3300005406 Bacteria 8789
6 Ga0070709_10038751 3300005434 Bacteria 2921
7 Ga0070709_10132904 3300005434 Bacteria 1701
8 Ga0070713_100055422 3300005436 Bacteria 3294
9 Ga0070713_100247006 3300005436 Bacteria 1626
10 Ga0070711_100005809 3300005439 Bacteria 7410
11 Ga0070711_100133769 3300005439 Unclassified 1850
12 Ga0070711_100172199 3300005439 Bacteria 1651
13 Ga0070705_100002963 3300005440 Bacteria 8392
14 Ga0070705_100195859 3300005440 Bacteria 1381
15 Ga0070694_100007183 3300005444 Bacteria 6781
16 Ga0070694_100172946 3300005444 Bacteria 1592
17 Ga0070708_100018076 3300005445 Bacteria 5897
18 Ga0070708_100121046 3300005445 Bacteria 2414
19 Ga0070708_100201606 3300005445 Bacteria 1863
20 Ga0070685_10052741 3300005466 Bacteria 2354
21 Ga0070706_100004061 3300005467 Bacteria 14228
22 Ga0070706_100041011 3300005467 Bacteria 4274
23 Ga0070706_100227863 3300005467 Bacteria 1740
24 Ga0070707_100001301 3300005468 Bacteria 24512
25 Ga0070707_100009449 3300005468 Bacteria 9052
26 Ga0070707_100070890 3300005468 Bacteria 3357
27 Ga0070698_100018105 3300005471 Bacteria 7417
28 Ga0070698_100026740 3300005471 Bacteria 6003
29 Ga0070699_100038918 3300005518 Bacteria 4117
30 Ga0070679_100214766 3300005530 Bacteria 1886
31 Ga0070697_100004828 3300005536 Bacteria 10334
32 Ga0070697_100013931 3300005536 Bacteria 6313
33 Ga0070697_100055446 3300005536 Bacteria 3222
34 Ga0068853_100134455 3300005539 Bacteria 2216
35 Ga0068853_100212144 3300005539 Unclassified 1765
36 Ga0070686_100193732 3300005544 Bacteria 1452
37 Ga0070695_100011693 3300005545 Bacteria 5253
38 Ga0070695_100019635 3300005545 Bacteria 4117
39 Ga0070696_100002064 3300005546 Bacteria 13174
40 Ga0070696_100214106 3300005546 Bacteria 1443
41 Ga0070693_100000761 3300005547 Bacteria 14214
42 Ga0070693_100003985 3300005547 Bacteria 6935
43 Ga0070665_100024093 3300005548 Bacteria 6129
44 Ga0070704_100013488 3300005549 Bacteria 5071
45 Ga0070704_100027163 3300005549 Bacteria 3792
46 Ga0068856_100016546 3300005614 Bacteria 7139
47 Ga0068856_100231894 3300005614 Bacteria 1861
48 Ga0068863_100002559 3300005841 Bacteria 18054
49 Ga0068860_100119301 3300005843 Bacteria 2525
50 Ga0081538_10005461 3300005981 Bacteria 11418
51 Ga0081538_10016168 3300005981 Bacteria 5736
52 Ga0070717_10120889 3300006028 Bacteria 2244
53 Ga0070717_10234162 3300006028 Bacteria 1617
54 Ga0070717_10295141 3300006028 Bacteria 1440
55 Ga0070716_100004445 3300006173 Bacteria 6703
56 Ga0070716_100154634 3300006173 Bacteria 1479
57 Ga0097621_100008428 3300006237 Bacteria 7426
58 Ga0068871_100026172 3300006358 Bacteria 4550
59 Ga0075433_10000334 3300006852 Bacteria 29106
60 Ga0075434_100007249 3300006871 Bacteria 10259
61 Ga0075434_100008492 3300006871 Bacteria 9555
62 Ga0075434_100012904 3300006871 Bacteria 7936
63 Ga0075434_100365247 3300006871 Bacteria 1464
64 Ga0075436_100003578 3300006914 Bacteria 10646
65 Ga0075436_100020244 3300006914 Bacteria 4566
66 Ga0075435_100001429 3300007076 Bacteria 15385
67 Ga0075435_100023335 3300007076 Bacteria 4783
68 Ga0075435_100053531 3300007076 Bacteria 3255
69 Ga0099794_10001264 3300007265 Bacteria 8745
70 Ga0099794_10004243 3300007265 Bacteria 5598
71 Ga0099794_10004627 3300007265 Bacteria 5436
72 Ga0099794_10005506 3300007265 Bacteria 5080
73 Ga0099794_10015005 3300007265 Bacteria 3408
74 Ga0099794_10027705 3300007265 Bacteria 2629
75 Ga0099794_10060507 3300007265 Bacteria 1839
76 Ga0099794_10079079 3300007265 Unclassified 1620
77 Ga0099794_10105910 3300007265 Bacteria 1406
78 Ga0099794_10128244 3300007265 Bacteria 1280
79 Ga0105240_10002389 3300009093 Bacteria 30277
80 Ga0105240_10524400 3300009093 Bacteria 1314
81 Ga0105245_10023269 3300009098 Bacteria 5439
82 Ga0114129_10033447 3300009147 Bacteria 7266
83 Ga0114129_10293064 3300009147 Bacteria 2171
84 Ga0105242_10024930 3300009176 Bacteria 4727
85 Ga0105248_10006866 3300009177 Bacteria 12481
86 Ga0105237_10001228 3300009545 Bacteria 34145
87 Ga0105237_10104468 3300009545 Bacteria 2825
88 Ga0105238_10032934 3300009551 Bacteria 5275
89 Ga0099796_10017219 3300010159 Bacteria 2148
90 Ga0105239_10000942 3300010375 Bacteria 41042
91 Ga0105239_10002828 3300010375 Bacteria 21705
92 Ga0157374_10035330 3300013296 Unclassified 4573
93 Ga0157374_10061148 3300013296 Bacteria 3527
94 Ga0157374_10103399 3300013296 Bacteria 2733
95 Ga0157378_10000110 3300013297 Bacteria 78459
96 Ga0157378_10015939 3300013297 Bacteria 6582
97 Ga0157378_10020280 3300013297 Bacteria 5846
98 Ga0163162_10014911 3300013306 Bacteria 7589
99 Ga0157372_10051358 3300013307 Bacteria 4588
100 Ga0157375_10158180 3300013308 Bacteria 2406
101 Ga0157376_10000065 3300014969 Bacteria 86390
102 Ga0157376_10006875 3300014969 Bacteria 8055
103 Ga0228598_1008840 3300024227 Unclassified 2026
104 Ga0207427_100110 3300025231 Bacteria 113735
105 Ga0209437_100093 3300025233 Bacteria 239733
106 Ga0209233_1000089 3300025261 Bacteria 316381
107 Ga0207653_10002153 3300025885 Bacteria 6270
108 Ga0207692_10157571 3300025898 Unclassified 1306
109 Ga0207685_10034676 3300025905 Bacteria 1835
110 Ga0207699_10012595 3300025906 Bacteria 4306
111 Ga0207699_10117726 3300025906 Bacteria 1713
112 Ga0207684_10002874 3300025910 Bacteria 17091
113 Ga0207684_10041380 3300025910 Bacteria 3907
114 Ga0207684_10052057 3300025910 Bacteria 3474
115 Ga0207695_10011810 3300025913 Bacteria 10537
116 Ga0207695_10335356 3300025913 Bacteria 1400
117 Ga0207671_10003332 3300025914 Bacteria 16139
118 Ga0207693_10019978 3300025915 Bacteria 5328
119 Ga0207693_10044764 3300025915 Unclassified 3478
120 Ga0207693_10063717 3300025915 Bacteria 2888
121 Ga0207693_10063860 3300025915 Unclassified 2885
122 Ga0207693_10070636 3300025915 Bacteria 2732
123 Ga0207663_10003450 3300025916 Bacteria 7745
124 Ga0207663_10212592 3300025916 Unclassified 1403
125 Ga0207652_10179382 3300025921 Bacteria 1903
126 Ga0207646_10000019 3300025922 Bacteria 282855
127 Ga0207646_10004258 3300025922 Bacteria 15634
128 Ga0207646_10371542 3300025922 Bacteria 1292
129 Ga0207694_10020990 3300025924 Bacteria 4944
130 Ga0207700_10083971 3300025928 Bacteria 2495
131 Ga0207686_10051841 3300025934 Unclassified 2558
132 Ga0207665_10000518 3300025939 Bacteria 26093
133 Ga0207665_10000807 3300025939 Bacteria 21194
134 Ga0207665_10042595 3300025939 Unclassified 3035
135 Ga0207639_10110519 3300026041 Bacteria 2239
136 Ga0209588_1001334 3300027671 Bacteria 6415
137 Ga0209588_1001780 3300027671 Bacteria 5718
138 Ga0209588_1003195 3300027671 Bacteria 4522
139 Ga0209588_1014620 3300027671 Bacteria 2405
140 Ga0209588_1028614 3300027671 Bacteria 1775
141 Ga0265354_1000376 3300028016 Bacteria 7875
142 Ga0265354_1000633 3300028016 Bacteria 5915
143 Ga0268266_10001200 3300028379 Bacteria 31990
144 Ga0268264_10092294 3300028381 Bacteria 2613
145 Ga0265319_1002065 3300028563 Bacteria 11291
146 Ga0265318_10001203 3300028577 Bacteria 15773
147 Ga0265338_10137007 3300028800 Bacteria 1923
148 Ga0265770_1000175 3300030878 Bacteria 8375
149 Ga0265760_10000001 3300031090 Bacteria 217786
150 Ga0265332_10000445 3300031238 Bacteria 29097
151 Ga0265320_10000070 3300031240 Bacteria 90235
152 Ga0265320_10004082 3300031240 Bacteria 9591
153 Ga0265325_10007959 3300031241 Bacteria 6294
154 Ga0265325_10014864 3300031241 Bacteria 4389
155 Ga0265329_10008624 3300031242 Bacteria 3851
156 Ga0265340_10002981 3300031247 Bacteria 9628
157 Ga0265339_10058816 3300031249 Bacteria 2074
158 Ga0265331_10000076 3300031250 Bacteria 145884
159 Ga0265331_10000329 3300031250 Bacteria 50871
160 Ga0265331_10011340 3300031250 Bacteria 4885
161 Ga0265316_10000006 3300031344 Bacteria 289686
162 Ga0265316_10001689 3300031344 Bacteria 23422
163 Ga0265316_10070580 3300031344 Unclassified 2694
164 Ga0265313_10006770 3300031595 Bacteria 8017
165 Ga0265314_10000056 3300031711 Bacteria 171647
166 Ga0265342_10002151 3300031712 Bacteria 17365
167 Ga0265342_10198723 3300031712 Bacteria 1090
168 Ga0307405_10043657 3300031731 Bacteria 2737
169 Ga0307410_10041365 3300031852 Bacteria 3039
170 Ga0307407_10062495 3300031903 Bacteria 2181
171 Ga0307409_100022081 3300031995 Bacteria 4380
172 Ga0307416_100304834 3300032002 Bacteria 1585
173 Ga0307416_100560165 3300032002 Bacteria 1217
174 Ga0307414_10102478 3300032004 Bacteria 2157
175 Ga0307411_10017782 3300032005 Bacteria 4063
176 Ga0316212_1000485 3300033547 Bacteria 4859
177 Ga0373926_0000167 3300035083 Bacteria 14532
178 Ga0373934_0040890 3300035086 Unclassified 1829
179 Ga0373923_0142653 3300035111 Bacteria 1083
180 Ga0373945_0043577 3300035116 Bacteria 1629
181 Ga0373953_0011376 3300035117 Bacteria 3122
182 Ga0373954_0003085 3300035118 Bacteria 7039
183 Ga0373954_0019778 3300035118 Bacteria 3040
184 Ga0373956_0001266 3300035119 Bacteria 10472
185 Ga0373943_0062763 3300035170 Bacteria 1861
186 Ga0373943_0233446 3300035170 Unclassified 1028
187 Ga0373955_0002996 3300035172 Bacteria 7401
188 Ga0373935_0179772 3300035692 Bacteria 1452
189 Ga0373927_0001203 3300035695 Bacteria 19660
190 Ga0373927_0008486 3300035695 Bacteria 6912
191 Ga0373933_0004930 3300035724 Bacteria 7281
192 Ga0373947_0123256 3300035725 Bacteria 1648
193 Ga0373937_0005762 3300036401 Bacteria 10645
194 Ga0373937_0230483 3300036401 Bacteria 1744
195 Ga0373937_0569530 3300036401 Unclassified 1076
196 Ga0373925_0001328 3300037068 Bacteria 21632
197 Ga0373925_0020718 3300037068 Bacteria 4790
198 Ga0400483_109592 3300039062 Bacteria 2492
199 Ga0453684_0022997 3300044712 Bacteria 9215
200 Ga0453684_0194358 3300044712 Bacteria 2370
201 Ga0451576_0105695 3300045051 Bacteria 2929
202 Ga0451576_0322054 3300045051 Bacteria 1618
203 Ga0495592_0010662 3300046454 Bacteria 6929
204 Ga0495592_0252372 3300046454 Bacteria 1165
205 Ga0495603_0086116 3300046455 Bacteria 1839
206 Ga0495629_0022753 3300046459 Unclassified 4467
207 Ga0495641_0018544 3300046461 Bacteria 3588
208 Ga0495651_0000146 3300046462 Bacteria 51552
209 Ga0495651_0003855 3300046462 Bacteria 11462
210 Ga0495651_0008844 3300046462 Bacteria 7728
211 Ga0495651_0015827 3300046462 Bacteria 5839
212 Ga0495653_0007234 3300046463 Bacteria 9093
213 Ga0495653_0024075 3300046463 Bacteria 4912
214 Ga0495580_0021823 3300046472 Bacteria 4722
215 Ga0495580_0070614 3300046472 Bacteria 2440
216 Ga0495580_0073674 3300046472 Bacteria 2384
217 Ga0495580_0273286 3300046472 Unclassified 1154
218 Ga0495582_0000069 3300046473 Bacteria 52545
219 Ga0495582_0037911 3300046473 Bacteria 2651
220 Ga0495639_0033466 3300046475 Bacteria 2295
221 Ga0495664_0075699 3300046477 Bacteria 2014
222 Ga0495664_0171460 3300046477 Unclassified 1316
223 Ga0495594_0010825 3300046499 Bacteria 4737
224 Ga0495608_0023355 3300046511 Bacteria 4238
225 Ga0495608_0032515 3300046511 Unclassified 3526
226 Ga0495618_0002063 3300046514 Bacteria 13190
227 Ga0495628_0000670 3300046516 Bacteria 31421
228 Ga0495628_0021323 3300046516 Bacteria 5332
229 Ga0495628_0024539 3300046516 Bacteria 4935
230 Ga0495628_0106870 3300046516 Unclassified 2155
231 Ga0495630_0003862 3300046517 Bacteria 10461
232 Ga0495630_0007152 3300046517 Bacteria 7956
233 Ga0495630_0044869 3300046517 Bacteria 3303
234 Ga0495630_0237243 3300046517 Bacteria 1393
235 Ga0495666_0044210 3300046526 Bacteria 2151
236 Ga0495652_0002233 3300046529 Bacteria 20297
237 Ga0495652_0015372 3300046529 Bacteria 6853
238 Ga0495652_0113457 3300046529 Bacteria 2175
239 Ga0495640_0043154 3300046533 Unclassified 3142
240 Ga0495586_0002447 3300046535 Bacteria 10078
241 Ga0495586_0019920 3300046535 Bacteria 3573
242 Ga0495586_0066096 3300046535 Bacteria 1971
243 Ga0495587_0001146 3300046536 Bacteria 17391
244 Ga0495587_0002260 3300046536 Bacteria 12876
245 Ga0495587_0006189 3300046536 Bacteria 7811
246 Ga0495645_0015291 3300046543 Bacteria 5456
247 Ga0495645_0019280 3300046543 Unclassified 4911
248 Ga0495622_0148280 3300046557 Bacteria 1062
249 Ga0495667_0018505 3300046559 Bacteria 4706
250 Ga0495667_0066362 3300046559 Bacteria 2359
251 Ga0495634_0029633 3300046642 Bacteria 3788
252 Ga0495634_0039411 3300046642 Bacteria 3217
253 Ga0495635_0041102 3300046663 Bacteria 3195
254 Ga0495635_0090634 3300046663 Bacteria 2091
255 Ga0495657_0010155 3300046675 Bacteria 7089
256 Ga0495599_0101546 3300046678 Unclassified 1792
257 Ga0495623_0003144 3300046679 Bacteria 10886
258 Ga0495646_0015115 3300046680 Bacteria 4903
259 Ga0495647_0014198 3300046681 Bacteria 2772
260 Ga0495658_0079111 3300046683 Bacteria 1925
261 Ga0495658_0195148 3300046683 Bacteria 1260
262 Ga0495613_0051947 3300046689 Bacteria 3020
263 Ga0495613_0119965 3300046689 Unclassified 1889
264 Ga0495613_0329069 3300046689 Bacteria 1053
265 Ga0495624_0000693 3300046690 Bacteria 26434
266 Ga0495624_0203819 3300046690 Unclassified 1201
267 Ga0495604_0000240 3300047317 Bacteria 49111
268 Ga0495604_0003416 3300047317 Bacteria 12660
269 Ga0495604_0018454 3300047317 Bacteria 5586
270 Ga0495604_0032513 3300047317 Bacteria 4134
271 Ga0495674_0008739 3300047319 Bacteria 9635
272 Ga0495674_0010045 3300047319 Bacteria 8971
273 Ga0495674_0015905 3300047319 Bacteria 7023
274 Ga0495674_0022003 3300047319 Bacteria 5886
275 Ga0495674_0022425 3300047319 Bacteria 5824
276 Ga0495674_0051596 3300047319 Bacteria 3625
277 Ga0495676_0037053 3300047321 Bacteria 4065
278 Ga0495680_0000935 3300047322 Bacteria 32427
279 Ga0495680_0007309 3300047322 Bacteria 10163
280 Ga0495680_0046825 3300047322 Bacteria 3407
281 Ga0495675_0000375 3300047444 Bacteria 30948
282 Ga0495675_0017914 3300047444 Bacteria 4490
283 Ga0495675_0050838 3300047444 Bacteria 2634
284 Ga0495675_0263369 3300047444 Bacteria 1032
285 Ga0495684_0016357 3300047471 Bacteria 5712
286 Ga0495684_0100383 3300047471 Bacteria 2188
287 Ga0495684_0184525 3300047471 Unclassified 1545
288 Ga0495684_0217814 3300047471 Bacteria 1401
289 Ga0495593_0001984 3300047673 Bacteria 12198
290 Ga0495602_0005850 3300048088 Bacteria 12906
291 Ga0495602_0026055 3300048088 Bacteria 5647
292 Ga0496102_0064851 3300048905 Bacteria 3347
293 Ga0496114_0015407 3300048917 Bacteria 6149
294 Ga0501034_0041939 3300049571 Bacteria 4631
295 Ga0501070_0419027 3300049586 Bacteria 1082
296 Ga0501202_001727 3300049652 Bacteria 3551
297 nmdc:mga0n895_1731_c1 3300050512 Bacteria 16498
298 nmdc:mga0n895_356540_c1 3300050512 Bacteria 1481
299 nmdc:mga0n895_4183_c1 3300050512 Bacteria 11787
300 nmdc:mga0n895_93932_c1 3300050512 Bacteria 3003
301 nmdc:mga0rr50_280719_c1 3300050513 Unclassified 1390
302 nmdc:mga08x19_199_c1 3300050514 Bacteria 46271
303 nmdc:mga0a205_4411_c1 3300050515 Bacteria 12625
304 Ga0495601_0008856 3300053077 Bacteria 5939
305 Ga0495612_0006336 3300053078 Bacteria 4879
306 Ga0495619_0016692 3300053085 Bacteria 4647
307 Ga0495619_0033954 3300053085 Unclassified 3315
308 Ga0500608_002260 3300053122 Bacteria 6958
309 Ga0590071_004167 3300059421 Bacteria 3526
310 Ga0590074_009119 3300059423 Bacteria 1654
311 Ga0590075_006034 3300059424 Bacteria 2867
312 Ga0070708_100068721
313 JGI25162J39368_1001493
314 JGI25164J39214_1001768
315 JGI25165J46597_1001232
316 Ga0070703_10001018
317 Ga0070709_10038751
318 Ga0070709_10132904
319 Ga0070713_100055422
320 Ga0070713_100247006
321 Ga0070711_100005809
322 Ga0070711_100133769
323 Ga0070711_100172199
324 Ga0070705_100002963
325 Ga0070705_100195859
326 Ga0070694_100007183
327 Ga0070694_100172946
328 Ga0070708_100018076
329 Ga0070708_100121046
330 Ga0070708_100201606
331 Ga0070685_10052741
332 Ga0070706_100004061
333 Ga0070706_100041011
334 Ga0070706_100227863
335 Ga0070707_100001301
336 Ga0070707_100009449
337 Ga0070707_100070890
338 Ga0070698_100018105
339 Ga0070698_100026740
340 Ga0070699_100038918
341 Ga0070679_100214766
342 Ga0070697_100004828
343 Ga0070697_100013931
344 Ga0070697_100055446
345 Ga0068853_100134455
346 Ga0068853_100212144
347 Ga0070686_100193732
348 Ga0070695_100011693
349 Ga0070695_100019635
350 Ga0070696_100002064
351 Ga0070696_100214106
352 Ga0070693_100000761
353 Ga0070693_100003985
354 Ga0070665_100024093
355 Ga0070704_100013488
356 Ga0070704_100027163
357 Ga0068856_100016546
358 Ga0068856_100231894
359 Ga0068863_100002559
360 Ga0068860_100119301
361 Ga0081538_10005461
362 Ga0081538_10016168
363 Ga0070717_10120889
364 Ga0070717_10234162
365 Ga0070717_10295141
366 Ga0070716_100004445
367 Ga0070716_100154634
368 Ga0097621_100008428
369 Ga0068871_100026172
370 Ga0075433_10000334
371 Ga0075434_100007249
372 Ga0075434_100008492
373 Ga0075434_100012904
374 Ga0075434_100365247
375 Ga0075436_100003578
376 Ga0075436_100020244
377 Ga0075435_100001429
378 Ga0075435_100023335
379 Ga0075435_100053531
380 Ga0099794_10001264
381 Ga0099794_10004243
382 Ga0099794_10004627
383 Ga0099794_10005506
384 Ga0099794_10015005
385 Ga0099794_10027705
386 Ga0099794_10060507
387 Ga0099794_10079079
388 Ga0099794_10105910
389 Ga0099794_10128244
390 Ga0105240_10002389
391 Ga0105240_10524400
392 Ga0105245_10023269
393 Ga0114129_10033447
394 Ga0114129_10293064
395 Ga0105242_10024930
396 Ga0105248_10006866
397 Ga0105237_10001228
398 Ga0105237_10104468
399 Ga0105238_10032934
400 Ga0099796_10017219
401 Ga0105239_10000942
402 Ga0105239_10002828
403 Ga0157374_10035330
404 Ga0157374_10061148
405 Ga0157374_10103399
406 Ga0157378_10000110
407 Ga0157378_10015939
408 Ga0157378_10020280
409 Ga0163162_10014911
410 Ga0157372_10051358
411 Ga0157375_10158180
412 Ga0157376_10000065
413 Ga0157376_10006875
414 Ga0228598_1008840
415 Ga0207427_100110
416 Ga0209437_100093
417 Ga0209233_1000089
418 Ga0207653_10002153
419 Ga0207692_10157571
420 Ga0207685_10034676
421 Ga0207699_10012595
422 Ga0207699_10117726
423 Ga0207684_10002874
424 Ga0207684_10041380
425 Ga0207684_10052057
426 Ga0207695_10011810
427 Ga0207695_10335356
428 Ga0207671_10003332
429 Ga0207693_10019978
430 Ga0207693_10044764
431 Ga0207693_10063717
432 Ga0207693_10063860
433 Ga0207693_10070636
434 Ga0207663_10003450
435 Ga0207663_10212592
436 Ga0207652_10179382
437 Ga0207646_10000019
438 Ga0207646_10004258
439 Ga0207646_10371542
440 Ga0207694_10020990
441 Ga0207700_10083971
442 Ga0207686_10051841
443 Ga0207665_10000518
444 Ga0207665_10000807
445 Ga0207665_10042595
446 Ga0207639_10110519
447 Ga0209588_1001334
448 Ga0209588_1001780
449 Ga0209588_1003195
450 Ga0209588_1014620
451 Ga0209588_1028614
452 Ga0265354_1000376
453 Ga0265354_1000633
454 Ga0268266_10001200
455 Ga0268264_10092294
456 Ga0265319_1002065
457 Ga0265318_10001203
458 Ga0265338_10137007
459 Ga0265770_1000175
460 Ga0265760_10000001
461 Ga0265332_10000445
462 Ga0265320_10000070
463 Ga0265320_10004082
464 Ga0265325_10007959
465 Ga0265325_10014864
466 Ga0265329_10008624
467 Ga0265340_10002981
468 Ga0265339_10058816
469 Ga0265331_10000076
470 Ga0265331_10000329
471 Ga0265331_10011340
472 Ga0265316_10000006
473 Ga0265316_10001689
474 Ga0265316_10070580
475 Ga0265313_10006770
476 Ga0265314_10000056
477 Ga0265342_10002151
478 Ga0265342_10198723
479 Ga0307405_10043657
480 Ga0307410_10041365
481 Ga0307407_10062495
482 Ga0307409_100022081
483 Ga0307416_100304834
484 Ga0307416_100560165
485 Ga0307414_10102478
486 Ga0307411_10017782
487 Ga0316212_1000485
488 Ga0373926_0000167
489 Ga0373934_0040890
490 Ga0373923_0142653
491 Ga0373945_0043577
492 Ga0373953_0011376
493 Ga0373954_0003085
494 Ga0373954_0019778
495 Ga0373956_0001266
496 Ga0373943_0062763
497 Ga0373943_0233446
498 Ga0373955_0002996
499 Ga0373935_0179772
500 Ga0373927_0001203
501 Ga0373927_0008486
502 Ga0373933_0004930
503 Ga0373947_0123256
504 Ga0373937_0005762
505 Ga0373937_0230483
506 Ga0373937_0569530
507 Ga0373925_0001328
508 Ga0373925_0020718
509 Ga0400483_109592
510 Ga0453684_0022997
511 Ga0453684_0194358
512 Ga0451576_0105695
513 Ga0451576_0322054
514 Ga0495592_0010662
515 Ga0495592_0252372
516 Ga0495603_0086116
517 Ga0495629_0022753
518 Ga0495641_0018544
519 Ga0495651_0000146
520 Ga0495651_0003855
521 Ga0495651_0008844
522 Ga0495651_0015827
523 Ga0495653_0007234
524 Ga0495653_0024075
525 Ga0495580_0021823
526 Ga0495580_0070614
527 Ga0495580_0073674
528 Ga0495580_0273286
529 Ga0495582_0000069
530 Ga0495582_0037911
531 Ga0495639_0033466
532 Ga0495664_0075699
533 Ga0495664_0171460
534 Ga0495594_0010825
535 Ga0495608_0023355
536 Ga0495608_0032515
537 Ga0495618_0002063
538 Ga0495628_0000670
539 Ga0495628_0021323
540 Ga0495628_0024539
541 Ga0495628_0106870
542 Ga0495630_0003862
543 Ga0495630_0007152
544 Ga0495630_0044869
545 Ga0495630_0237243
546 Ga0495666_0044210
547 Ga0495652_0002233
548 Ga0495652_0015372
549 Ga0495652_0113457
550 Ga0495640_0043154
551 Ga0495586_0002447
552 Ga0495586_0019920
553 Ga0495586_0066096
554 Ga0495587_0001146
555 Ga0495587_0002260
556 Ga0495587_0006189
557 Ga0495645_0015291
558 Ga0495645_0019280
559 Ga0495622_0148280
560 Ga0495667_0018505
561 Ga0495667_0066362
562 Ga0495634_0029633
563 Ga0495634_0039411
564 Ga0495635_0041102
565 Ga0495635_0090634
566 Ga0495657_0010155
567 Ga0495599_0101546
568 Ga0495623_0003144
569 Ga0495646_0015115
570 Ga0495647_0014198
571 Ga0495658_0079111
572 Ga0495658_0195148
573 Ga0495613_0051947
574 Ga0495613_0119965
575 Ga0495613_0329069
576 Ga0495624_0000693
577 Ga0495624_0203819
578 Ga0495604_0000240
579 Ga0495604_0003416
580 Ga0495604_0018454
581 Ga0495604_0032513
582 Ga0495674_0008739
583 Ga0495674_0010045
584 Ga0495674_0015905
585 Ga0495674_0022003
586 Ga0495674_0022425
587 Ga0495674_0051596
588 Ga0495676_0037053
589 Ga0495680_0000935
590 Ga0495680_0007309
591 Ga0495680_0046825
592 Ga0495675_0000375
593 Ga0495675_0017914
594 Ga0495675_0050838
595 Ga0495675_0263369
596 Ga0495684_0016357
597 Ga0495684_0100383
598 Ga0495684_0184525
599 Ga0495684_0217814
600 Ga0495593_0001984
601 Ga0495602_0005850
602 Ga0495602_0026055
603 Ga0496102_0064851
604 Ga0496114_0015407
605 Ga0501034_0041939
606 Ga0501070_0419027
607 Ga0501202_001727
608 nmdc:mga0n895_1731_c1
609 nmdc:mga0n895_356540_c1
610 nmdc:mga0n895_4183_c1
611 nmdc:mga0n895_93932_c1
612 nmdc:mga0rr50_280719_c1
613 nmdc:mga08x19_199_c1
614 nmdc:mga0a205_4411_c1
615 Ga0495601_0008856
616 Ga0495612_0006336
617 Ga0495619_0016692
618 Ga0495619_0033954
619 Ga0500608_002260
620 Ga0590071_004167
621 Ga0590074_009119
622 Ga0590075_006034

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07650

KH_2

KH domain

238

314

0.98

PF02421

FeoB_N

Ferrous iron transport protein B

23

118

0.86

PF00009

GTP_EFTU

Elongation factor Tu GTP binding domain

50

204

0.78

PF04548

AIG1

AIG1 family

23

116

0.78

PF01926

MMR_HSR1

50S ribosome-binding GTPase

23

155

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
7c1o-assembly1.cif.gz_A crystal structure of aquifex aeolicus era y63a bound to gdp.alf4- 0.9326 4 281
3r9w-assembly1.cif.gz_A crystal structure of era in complex with mggdpnp and nucleotides 1506-1542 of 16s ribosomal rna 0.925 3 281
7c1o-assembly1.cif.gz_A crystal structure of aquifex aeolicus era y63a bound to gdp.alf4- 0.9167 4 281
3r9w-assembly1.cif.gz_A crystal structure of era in complex with mggdpnp and nucleotides 1506-1542 of 16s ribosomal rna 0.9122 3 281
1wf3-assembly1.cif.gz_A crystal structure of gtp-binding protein tt1341 from thermus thermophilus hb8 0.9004 1 282
ID Description Score Start End Superfamily
af_B9FI63_305_419_3.30.300.20 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9827 172 281 3.30.300.20
af_Q2FY06_184_297_3.30.300.20 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9712 172 282 3.30.300.20
af_P9WNK9_187_300_3.30.300.20 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.96 172 281 3.30.300.20
af_Q9VG07_272_372_3.30.300.20 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9507 172 268 3.30.300.20
1wf3A02 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9442 172 282 3.30.300.20
ID Description Score Start End GO Terms
AF-A0A4Q3DXQ7-F1-model_v4 GTPase Era 0.985 200 282 GO:0000028
GO:0005525
GO:0005829
GO:0019843
GO:0043024
AF-A0A3D3JYY3-F1-model_v4 GTPase Era 0.984 176 282 GO:0000028
GO:0005525
GO:0005829
GO:0019843
GO:0043024
AF-A0A533SMJ8-F1-model_v4 GTPase Era 0.9788 201 282 GO:0000028
GO:0005525
GO:0005829
GO:0019843
GO:0043024
AF-A0A7X7SGL2-F1-model_v4 KH domain-containing protein 0.9768 139 282 GO:0000028
GO:0005525
GO:0005829
GO:0019843
GO:0043024
AF-A0A5C0ZUT7-F1-model_v4 GTPase Era 0.9736 1 282 GO:0000028
GO:0003924
GO:0005525
GO:0005829
GO:0005886
GO:0043024
GO:0070181

Map