F401202

General Info

Members Datasets Scaffolds Average Seq Length
311 187 622 357

Family's Representative Sequence

Representative Sequence 3300013306|Ga0163162_10161098|Ga0163162_101610982
Length 381
Sequence VNDSPQPRDESDAPTEAMKTLSVGLADRAYPIHIGSGLLERAADLLALDARVRGVIVTNAVVAAHYLAPLKASLRRSGAQVDVVLMPDGEAHKNWSTLDDLLTRLLELRVERSTLLIALGGGVIGDITGFAAAICQRGIPFVQVPTTLLAQVDSSVGGKTGVNHALGENMIGAFWQPRCVLIDTNCLRTLPDRELRAGIAEVIKYGAIRDVEFFAWLEHEMHALLAKDPTALAHAIHRSCAIKAEIVAADERESGERALLNFGHTFGHAIEAAQGYGAWLHGEAVAAGMVCAAILSERVSGLTRADASRLTALIGAAGLPIAPPKMPAERWLDLMRRDKKVERGAMRFVLLNRLGFAAVRADVPERDVIFAISPTVTTSER

Samples

Sample ID Description Type Environment
1 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
49 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
68 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
70 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
114 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
117 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
118 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
119 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
120 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
121 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
122 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
123 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
124 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
125 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
126 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
127 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
128 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
129 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
130 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
131 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
132 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
133 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
134 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
135 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
136 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
137 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
138 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
139 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
140 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
141 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
142 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
143 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
144 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
145 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
146 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
147 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
148 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
149 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
150 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
151 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
152 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
153 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
154 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
155 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
156 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
157 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
158 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
159 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
160 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
161 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
162 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
163 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
164 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
165 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
166 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
167 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
168 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
169 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
170 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
171 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
172 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
173 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
174 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
175 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
176 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
177 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
181 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
182 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
183 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
184 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
185 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
186 2671180139 Chelativorans sp. A52C2 Isolate Unclassified
187 2990196909 Pseudomonas mangrovi TC-11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.21
Metatranscriptomes 5.14
Isolates 0.64

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.61
Rhizosphere 95.5
Stem 0
Stem Tuber 0
Unclassified 0.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0163162_10161098 3300013306 Bacteria 2365
2 Ga0070658_10009071 3300005327 Bacteria 8002
3 Ga0070676_10135792 3300005328 Bacteria 1560
4 Ga0070683_100106112 3300005329 Bacteria 2648
5 Ga0070670_100079713 3300005331 Bacteria 2814
6 Ga0070670_100191347 3300005331 Bacteria 1777
7 Ga0068869_100019137 3300005334 Bacteria 4672
8 Ga0068869_100220900 3300005334 Bacteria 1502
9 Ga0070680_100013522 3300005336 Bacteria 6357
10 Ga0070682_100029222 3300005337 Bacteria 3318
11 Ga0068868_100131337 3300005338 Bacteria 2049
12 Ga0070660_100013781 3300005339 Bacteria 5815
13 Ga0070660_100032745 3300005339 Bacteria 3914
14 Ga0070660_100124311 3300005339 Bacteria 2061
15 Ga0070689_100205358 3300005340 Bacteria 1610
16 Ga0070661_100005437 3300005344 Bacteria 8781
17 Ga0070661_100163348 3300005344 Bacteria 1687
18 Ga0070675_100014771 3300005354 Bacteria 6162
19 Ga0070675_100046478 3300005354 Bacteria 3554
20 Ga0070675_100057789 3300005354 Bacteria 3198
21 Ga0070675_100152579 3300005354 Bacteria 1981
22 Ga0070671_100002423 3300005355 Bacteria 14419
23 Ga0070671_100077621 3300005355 Bacteria 2776
24 Ga0070674_100099744 3300005356 Bacteria 2113
25 Ga0070673_100018843 3300005364 Bacteria 4945
26 Ga0070673_100115356 3300005364 Bacteria 2233
27 Ga0070659_100006595 3300005366 Bacteria 8383
28 Ga0070659_100070524 3300005366 Bacteria 2776
29 Ga0070659_100128577 3300005366 Bacteria 2056
30 Ga0070714_100051835 3300005435 Bacteria 3499
31 Ga0070714_100340092 3300005435 Bacteria 1407
32 Ga0070700_100006350 3300005441 Bacteria 6316
33 Ga0070663_100060690 3300005455 Bacteria 2721
34 Ga0070678_100017893 3300005456 Bacteria 4577
35 Ga0070678_100216052 3300005456 Bacteria 1591
36 Ga0070662_100001027 3300005457 Bacteria 17072
37 Ga0070662_100021855 3300005457 Bacteria 4373
38 Ga0070662_100039100 3300005457 Bacteria 3373
39 Ga0070681_10011444 3300005458 Bacteria 8781
40 Ga0068867_100101371 3300005459 Bacteria 2199
41 Ga0070679_100032704 3300005530 Bacteria 5147
42 Ga0070679_100082016 3300005530 Bacteria 3215
43 Ga0070684_100002389 3300005535 Bacteria 13833
44 Ga0068853_100004619 3300005539 Bacteria 10686
45 Ga0068853_100007716 3300005539 Bacteria 8629
46 Ga0068853_100139147 3300005539 Bacteria 2178
47 Ga0070672_100036202 3300005543 Bacteria 3759
48 Ga0070693_100227823 3300005547 Bacteria 1225
49 Ga0070665_100178490 3300005548 Bacteria 2125
50 Ga0070704_100196011 3300005549 Bacteria 1627
51 Ga0068855_100007599 3300005563 Bacteria 13117
52 Ga0068855_100208882 3300005563 Bacteria 2195
53 Ga0070664_100002891 3300005564 Bacteria 13902
54 Ga0070664_100045427 3300005564 Bacteria 3709
55 Ga0070664_100272336 3300005564 Bacteria 1525
56 Ga0068854_100001870 3300005578 Bacteria 12831
57 Ga0068854_100046990 3300005578 Bacteria 3075
58 Ga0068854_100074588 3300005578 Bacteria 2489
59 Ga0068856_100003250 3300005614 Bacteria 16544
60 Ga0068856_100021260 3300005614 Bacteria 6303
61 Ga0068856_100182749 3300005614 Bacteria 2110
62 Ga0068856_100595213 3300005614 Bacteria 1127
63 Ga0068852_100021431 3300005616 Bacteria 5160
64 Ga0068852_100158393 3300005616 Bacteria 2111
65 Ga0068859_100095454 3300005617 Bacteria 3026
66 Ga0068859_100191846 3300005617 Bacteria 2127
67 Ga0068864_100083064 3300005618 Bacteria 2812
68 Ga0068864_100150993 3300005618 Bacteria 2104
69 Ga0068861_100044375 3300005719 Bacteria 3343
70 Ga0068861_100071524 3300005719 Bacteria 2689
71 Ga0068851_10061997 3300005834 Bacteria 1918
72 Ga0068870_10060290 3300005840 Bacteria 2037
73 Ga0068870_10132369 3300005840 Bacteria 1450
74 Ga0068863_100117074 3300005841 Bacteria 2539
75 Ga0068858_100067246 3300005842 Bacteria 3319
76 Ga0068858_100125130 3300005842 Bacteria 2406
77 Ga0068860_100151457 3300005843 Bacteria 2233
78 Ga0068860_100159000 3300005843 Bacteria 2178
79 Ga0068871_100009489 3300006358 Bacteria 7055
80 Ga0068871_100009626 3300006358 Bacteria 7016
81 Ga0068865_100118078 3300006881 Bacteria 1967
82 Ga0068865_100263449 3300006881 Bacteria 1365
83 Ga0097620_100095451 3300006931 Bacteria 3026
84 Ga0097620_100191859 3300006931 Bacteria 2127
85 Ga0099794_10014697 3300007265 Bacteria 3436
86 Ga0099795_10045911 3300007788 Bacteria 1572
87 Ga0105240_10020752 3300009093 Bacteria 8752
88 Ga0111539_10032693 3300009094 Bacteria 6317
89 Ga0111539_10082854 3300009094 Bacteria 3773
90 Ga0105241_10014604 3300009174 Bacteria 5751
91 Ga0105241_10044189 3300009174 Bacteria 3375
92 Ga0105242_10119631 3300009176 Bacteria 2258
93 Ga0105248_10007755 3300009177 Bacteria 11784
94 Ga0105248_10119137 3300009177 Bacteria 2977
95 Ga0105237_10132692 3300009545 Bacteria 2485
96 Ga0105238_10079660 3300009551 Bacteria 3266
97 Ga0105249_10056685 3300009553 Bacteria 3587
98 Ga0105249_10369763 3300009553 Bacteria 1457
99 Ga0105239_10079530 3300010375 Bacteria 3607
100 Ga0157373_10001349 3300013100 Bacteria 18818
101 Ga0157371_10000787 3300013102 Bacteria 36521
102 Ga0157371_10068652 3300013102 Bacteria 2509
103 Ga0157370_10065986 3300013104 Bacteria 3424
104 Ga0157378_10019252 3300013297 Bacteria 5999
105 Ga0157378_10486537 3300013297 Bacteria 1230
106 Ga0163162_10319028 3300013306 Bacteria 1686
107 Ga0157372_10038289 3300013307 Bacteria 5291
108 Ga0157372_10038348 3300013307 Bacteria 5287
109 Ga0157372_10043684 3300013307 Bacteria 4963
110 Ga0157372_10082100 3300013307 Bacteria 3649
111 Ga0157372_10110460 3300013307 Bacteria 3149
112 Ga0157375_10018659 3300013308 Bacteria 6296
113 Ga0157375_10301339 3300013308 Bacteria 1766
114 Ga0157375_10349764 3300013308 Bacteria 1644
115 Ga0163163_10065238 3300014325 Bacteria 3614
116 Ga0157380_10068448 3300014326 Bacteria 2861
117 Ga0157377_10022794 3300014745 Bacteria 3311
118 Ga0206353_10842256 3300020082 Bacteria 2440
119 Ga0224572_1005853 3300024225 Unclassified 2208
120 Ga0207656_10112931 3300025321 Bacteria 1257
121 Ga0207682_10001092 3300025893 Bacteria 12531
122 Ga0207682_10007645 3300025893 Bacteria 4301
123 Ga0207642_10068683 3300025899 Bacteria 1677
124 Ga0207642_10113487 3300025899 Bacteria 1384
125 Ga0207688_10000286 3300025901 Bacteria 23042
126 Ga0207645_10000437 3300025907 Bacteria 34598
127 Ga0207645_10069249 3300025907 Bacteria 2257
128 Ga0207643_10001528 3300025908 Bacteria 13206
129 Ga0207643_10001998 3300025908 Bacteria 11251
130 Ga0207707_10099366 3300025912 Bacteria 2543
131 Ga0207707_10250130 3300025912 Bacteria 1540
132 Ga0207695_10014087 3300025913 Bacteria 9495
133 Ga0207671_10081687 3300025914 Bacteria 2424
134 Ga0207693_10274526 3300025915 Bacteria 1321
135 Ga0207662_10044340 3300025918 Bacteria 2626
136 Ga0207657_10000258 3300025919 Bacteria 56256
137 Ga0207657_10011582 3300025919 Bacteria 8749
138 Ga0207652_10021300 3300025921 Bacteria 5350
139 Ga0207652_10076328 3300025921 Bacteria 2922
140 Ga0207681_10023231 3300025923 Bacteria 3963
141 Ga0207681_10192521 3300025923 Bacteria 1561
142 Ga0207694_10005206 3300025924 Bacteria 10044
143 Ga0207650_10032608 3300025925 Bacteria 3768
144 Ga0207650_10049122 3300025925 Bacteria 3114
145 Ga0207659_10016597 3300025926 Bacteria 4795
146 Ga0207659_10052272 3300025926 Bacteria 2910
147 Ga0207659_10058183 3300025926 Bacteria 2774
148 Ga0207659_10219240 3300025926 Bacteria 1529
149 Ga0207664_10011535 3300025929 Bacteria 6289
150 Ga0207644_10025729 3300025931 Bacteria 4048
151 Ga0207644_10031504 3300025931 Bacteria 3694
152 Ga0207644_10113206 3300025931 Bacteria 2054
153 Ga0207690_10009126 3300025932 Bacteria 5886
154 Ga0207690_10074456 3300025932 Bacteria 2352
155 Ga0207690_10131658 3300025932 Bacteria 1831
156 Ga0207706_10000023 3300025933 Bacteria 153979
157 Ga0207706_10000774 3300025933 Bacteria 33156
158 Ga0207706_10032708 3300025933 Bacteria 4630
159 Ga0207706_10143300 3300025933 Bacteria 2102
160 Ga0207704_10064221 3300025938 Bacteria 2292
161 Ga0207704_10205499 3300025938 Bacteria 1445
162 Ga0207691_10001463 3300025940 Bacteria 23542
163 Ga0207691_10002304 3300025940 Bacteria 18711
164 Ga0207691_10048196 3300025940 Bacteria 3907
165 Ga0207711_10436716 3300025941 Bacteria 1218
166 Ga0207689_10014229 3300025942 Bacteria 6770
167 Ga0207689_10030308 3300025942 Bacteria 4508
168 Ga0207689_10207077 3300025942 Bacteria 1620
169 Ga0207679_10019742 3300025945 Bacteria 4535
170 Ga0207667_10002136 3300025949 Bacteria 24781
171 Ga0207667_10045015 3300025949 Bacteria 4674
172 Ga0207651_10022951 3300025960 Bacteria 3828
173 Ga0207640_10009098 3300025981 Bacteria 5547
174 Ga0207640_10044300 3300025981 Bacteria 2850
175 Ga0207658_10056514 3300025986 Bacteria 2913
176 Ga0207658_10133118 3300025986 Bacteria 2000
177 Ga0207703_10150559 3300026035 Bacteria 2028
178 Ga0207639_10024001 3300026041 Bacteria 4407
179 Ga0207639_10145525 3300026041 Bacteria 1979
180 Ga0207678_10005112 3300026067 Bacteria 11768
181 Ga0207678_10013739 3300026067 Bacteria 7111
182 Ga0207708_10000864 3300026075 Bacteria 22828
183 Ga0207702_10000523 3300026078 Bacteria 43069
184 Ga0207702_10041860 3300026078 Bacteria 3841
185 Ga0207702_10156560 3300026078 Bacteria 2077
186 Ga0207641_10062206 3300026088 Bacteria 3185
187 Ga0207641_10315316 3300026088 Bacteria 1481
188 Ga0207648_10000608 3300026089 Bacteria 40199
189 Ga0207648_10107996 3300026089 Bacteria 2442
190 Ga0207674_10000429 3300026116 Bacteria 54858
191 Ga0207675_100057844 3300026118 Bacteria 3618
192 Ga0207675_100084641 3300026118 Bacteria 2976
193 Ga0207675_100252141 3300026118 Bacteria 1708
194 Ga0207683_10213894 3300026121 Bacteria 1755
195 Ga0207698_10015711 3300026142 Bacteria 5080
196 Ga0209998_10007144 3300027717 Bacteria 2317
197 Ga0209974_10000642 3300027876 Bacteria 11791
198 Ga0209974_10006415 3300027876 Bacteria 4107
199 Ga0207428_10076608 3300027907 Bacteria 2619
200 Ga0268266_10086368 3300028379 Bacteria 2743
201 Ga0268264_10058137 3300028381 Bacteria 3237
202 Ga0265316_10100348 3300031344 Bacteria 2201
203 Ga0307408_100000908 3300031548 Bacteria 23248
204 Ga0307408_100002636 3300031548 Bacteria 12470
205 Ga0316575_10005340 3300031665 Bacteria 4577
206 Ga0316575_10007825 3300031665 Bacteria 3878
207 Ga0316575_10027947 3300031665 Bacteria 2196
208 Ga0316579_10001485 3300031691 Bacteria 8524
209 Ga0316576_10002064 3300031727 Bacteria 11275
210 Ga0316576_10003739 3300031727 Bacteria 8982
211 Ga0316576_10019281 3300031727 Bacteria 4672
212 Ga0316576_10022848 3300031727 Bacteria 4349
213 Ga0316576_10027394 3300031727 Bacteria 4008
214 Ga0316578_10011298 3300031728 Bacteria 4665
215 Ga0316578_10014746 3300031728 Bacteria 4185
216 Ga0316578_10030117 3300031728 Bacteria 3083
217 Ga0316578_10044280 3300031728 Bacteria 2588
218 Ga0316578_10065224 3300031728 Bacteria 2150
219 Ga0307405_10011737 3300031731 Bacteria 4609
220 Ga0316577_10020511 3300031733 Bacteria 3662
221 Ga0316577_10033291 3300031733 Bacteria 2879
222 Ga0316577_10104415 3300031733 Bacteria 1589
223 Ga0307406_10006583 3300031901 Bacteria 6422
224 Ga0307407_10006879 3300031903 Bacteria 5104
225 Ga0307412_10032658 3300031911 Bacteria 3301
226 Ga0307409_100000380 3300031995 Bacteria 18816
227 Ga0307416_100022661 3300032002 Bacteria 4538
228 Ga0307414_10043119 3300032004 Bacteria 3071
229 Ga0307415_100004391 3300032126 Bacteria 7309
230 Ga0316583_10001959 3300032133 Bacteria 7031
231 Ga0316583_10007187 3300032133 Bacteria 4004
232 Ga0316585_10002201 3300032137 Bacteria 5229
233 Ga0316580_10034064 3300032139 Bacteria 1576
234 Ga0316593_10000494 3300032168 Bacteria 7326
235 Ga0316593_10023679 3300032168 Bacteria 1941
236 Ga0316593_10051259 3300032168 Bacteria 1395
237 Ga0316592_1000015 3300033524 Bacteria 12606
238 Ga0316592_1008748 3300033524 Bacteria 2010
239 Ga0316586_1000242 3300033527 Bacteria 4735
240 Ga0316586_1009366 3300033527 Bacteria 1466
241 Ga0316588_1000498 3300033528 Bacteria 5380
242 Ga0316588_1000545 3300033528 Bacteria 5251
243 Ga0316588_1003725 3300033528 Bacteria 2817
244 Ga0316588_1005601 3300033528 Bacteria 2458
245 Ga0316587_1002182 3300033529 Bacteria 2576
246 Ga0316596_1002598 3300033541 Bacteria 3872
247 Ga0316596_1003182 3300033541 Bacteria 3576
248 Ga0316596_1003245 3300033541 Bacteria 3545
249 Ga0316574_0000268 3300035398 Bacteria 19292
250 Ga0316574_0000315 3300035398 Bacteria 18448
251 Ga0316574_0006363 3300035398 Bacteria 6379
252 Ga0316574_0014193 3300035398 Bacteria 4595
253 Ga0316574_0019414 3300035398 Bacteria 4009
254 Ga0316574_0073820 3300035398 Bacteria 2157
255 Ga0316574_0171769 3300035398 Bacteria 1395
256 Ga0373937_0006988 3300036401 Bacteria 9741
257 Ga0373937_0072670 3300036401 Bacteria 3173
258 Ga0316582_0013742 3300036647 Bacteria 4567
259 Ga0316582_0108408 3300036647 Bacteria 1846
260 Ga0316582_0109468 3300036647 Bacteria 1837
261 Ga0316584_0003459 3300036712 Bacteria 10259
262 Ga0316584_0014849 3300036712 Bacteria 5563
263 Ga0316584_0044348 3300036712 Bacteria 3316
264 Ga0395899_0138223 3300037312 Bacteria 1735
265 Ga0395900_0197005 3300037418 Bacteria 2040
266 Ga0316581_0045652 3300037588 Bacteria 1339
267 Ga0400484_15928 3300038725 Bacteria 28386
268 Ga0400490_02176 3300038726 Bacteria 11223
269 Ga0400488_10208 3300038741 Bacteria 8322
270 Ga0400488_55174 3300038741 Bacteria 3577
271 Ga0400483_197721 3300039062 Bacteria 1626
272 Ga0400483_216636 3300039062 Bacteria 13726
273 Ga0466963_0195493 3300044694 Bacteria 1414
274 Ga0495592_0000208 3300046454 Bacteria 50220
275 Ga0495662_0037823 3300046476 Bacteria 2331
276 Ga0495608_0000215 3300046511 Bacteria 41692
277 Ga0495618_0017894 3300046514 Bacteria 4348
278 Ga0495628_0000828 3300046516 Bacteria 28693
279 Ga0495630_0007062 3300046517 Bacteria 8001
280 Ga0495640_0004866 3300046533 Bacteria 10684
281 Ga0495586_0000295 3300046535 Bacteria 31568
282 Ga0495587_0038173 3300046536 Bacteria 2881
283 Ga0495587_0165869 3300046536 Bacteria 1256
284 Ga0495621_0002058 3300046539 Bacteria 5323
285 Ga0495667_0013194 3300046559 Bacteria 5596
286 Ga0495634_0009815 3300046642 Bacteria 7043
287 Ga0495658_0009536 3300046683 Bacteria 4840
288 Ga0495613_0008282 3300046689 Bacteria 7717
289 Ga0495624_0037351 3300046690 Bacteria 3126
290 Ga0495600_0034077 3300046809 Bacteria 3306
291 Ga0495604_0004946 3300047317 Bacteria 10566
292 Ga0495680_0000180 3300047322 Bacteria 66863
293 Ga0495675_0076272 3300047444 Bacteria 2113
294 Ga0496101_0250630 3300048904 Bacteria 1379
295 Ga0496104_0172616 3300048907 Bacteria 2073
296 Ga0496106_0002076 3300048909 Bacteria 15006
297 Ga0496107_0035641 3300048910 Bacteria 3567
298 Ga0496114_0110166 3300048917 Bacteria 2358
299 Ga0496124_0013500 3300048927 Bacteria 7970
300 Ga0501040_0000005 3300049576 Bacteria 99976
301 Ga0501042_0015001 3300049578 Bacteria 5298
302 Ga0501047_0032676 3300049581 Bacteria 5025
303 Ga0501073_0059359 3300049589 Bacteria 2672
304 Ga0501044_0066708 3300049823 Bacteria 3668
305 nmdc:mga0qj67_155029_c1 3300050509 Bacteria 1859
306 nmdc:mga08y16_287556_c1 3300050511 Bacteria 1695
307 nmdc:mga08y16_90207_c1 3300050511 Bacteria 3195
308 Ga0495601_0018591 3300053077 Bacteria 4230
309 Ga0495619_0229875 3300053085 Bacteria 1285
310 2671692528 2671180139 Bacteria 4196045
311 2990199596 2990196909 Bacteria 4054280
312 Ga0163162_10161098
313 Ga0070658_10009071
314 Ga0070676_10135792
315 Ga0070683_100106112
316 Ga0070670_100079713
317 Ga0070670_100191347
318 Ga0068869_100019137
319 Ga0068869_100220900
320 Ga0070680_100013522
321 Ga0070682_100029222
322 Ga0068868_100131337
323 Ga0070660_100013781
324 Ga0070660_100032745
325 Ga0070660_100124311
326 Ga0070689_100205358
327 Ga0070661_100005437
328 Ga0070661_100163348
329 Ga0070675_100014771
330 Ga0070675_100046478
331 Ga0070675_100057789
332 Ga0070675_100152579
333 Ga0070671_100002423
334 Ga0070671_100077621
335 Ga0070674_100099744
336 Ga0070673_100018843
337 Ga0070673_100115356
338 Ga0070659_100006595
339 Ga0070659_100070524
340 Ga0070659_100128577
341 Ga0070714_100051835
342 Ga0070714_100340092
343 Ga0070700_100006350
344 Ga0070663_100060690
345 Ga0070678_100017893
346 Ga0070678_100216052
347 Ga0070662_100001027
348 Ga0070662_100021855
349 Ga0070662_100039100
350 Ga0070681_10011444
351 Ga0068867_100101371
352 Ga0070679_100032704
353 Ga0070679_100082016
354 Ga0070684_100002389
355 Ga0068853_100004619
356 Ga0068853_100007716
357 Ga0068853_100139147
358 Ga0070672_100036202
359 Ga0070693_100227823
360 Ga0070665_100178490
361 Ga0070704_100196011
362 Ga0068855_100007599
363 Ga0068855_100208882
364 Ga0070664_100002891
365 Ga0070664_100045427
366 Ga0070664_100272336
367 Ga0068854_100001870
368 Ga0068854_100046990
369 Ga0068854_100074588
370 Ga0068856_100003250
371 Ga0068856_100021260
372 Ga0068856_100182749
373 Ga0068856_100595213
374 Ga0068852_100021431
375 Ga0068852_100158393
376 Ga0068859_100095454
377 Ga0068859_100191846
378 Ga0068864_100083064
379 Ga0068864_100150993
380 Ga0068861_100044375
381 Ga0068861_100071524
382 Ga0068851_10061997
383 Ga0068870_10060290
384 Ga0068870_10132369
385 Ga0068863_100117074
386 Ga0068858_100067246
387 Ga0068858_100125130
388 Ga0068860_100151457
389 Ga0068860_100159000
390 Ga0068871_100009489
391 Ga0068871_100009626
392 Ga0068865_100118078
393 Ga0068865_100263449
394 Ga0097620_100095451
395 Ga0097620_100191859
396 Ga0099794_10014697
397 Ga0099795_10045911
398 Ga0105240_10020752
399 Ga0111539_10032693
400 Ga0111539_10082854
401 Ga0105241_10014604
402 Ga0105241_10044189
403 Ga0105242_10119631
404 Ga0105248_10007755
405 Ga0105248_10119137
406 Ga0105237_10132692
407 Ga0105238_10079660
408 Ga0105249_10056685
409 Ga0105249_10369763
410 Ga0105239_10079530
411 Ga0157373_10001349
412 Ga0157371_10000787
413 Ga0157371_10068652
414 Ga0157370_10065986
415 Ga0157378_10019252
416 Ga0157378_10486537
417 Ga0163162_10319028
418 Ga0157372_10038289
419 Ga0157372_10038348
420 Ga0157372_10043684
421 Ga0157372_10082100
422 Ga0157372_10110460
423 Ga0157375_10018659
424 Ga0157375_10301339
425 Ga0157375_10349764
426 Ga0163163_10065238
427 Ga0157380_10068448
428 Ga0157377_10022794
429 Ga0206353_10842256
430 Ga0224572_1005853
431 Ga0207656_10112931
432 Ga0207682_10001092
433 Ga0207682_10007645
434 Ga0207642_10068683
435 Ga0207642_10113487
436 Ga0207688_10000286
437 Ga0207645_10000437
438 Ga0207645_10069249
439 Ga0207643_10001528
440 Ga0207643_10001998
441 Ga0207707_10099366
442 Ga0207707_10250130
443 Ga0207695_10014087
444 Ga0207671_10081687
445 Ga0207693_10274526
446 Ga0207662_10044340
447 Ga0207657_10000258
448 Ga0207657_10011582
449 Ga0207652_10021300
450 Ga0207652_10076328
451 Ga0207681_10023231
452 Ga0207681_10192521
453 Ga0207694_10005206
454 Ga0207650_10032608
455 Ga0207650_10049122
456 Ga0207659_10016597
457 Ga0207659_10052272
458 Ga0207659_10058183
459 Ga0207659_10219240
460 Ga0207664_10011535
461 Ga0207644_10025729
462 Ga0207644_10031504
463 Ga0207644_10113206
464 Ga0207690_10009126
465 Ga0207690_10074456
466 Ga0207690_10131658
467 Ga0207706_10000023
468 Ga0207706_10000774
469 Ga0207706_10032708
470 Ga0207706_10143300
471 Ga0207704_10064221
472 Ga0207704_10205499
473 Ga0207691_10001463
474 Ga0207691_10002304
475 Ga0207691_10048196
476 Ga0207711_10436716
477 Ga0207689_10014229
478 Ga0207689_10030308
479 Ga0207689_10207077
480 Ga0207679_10019742
481 Ga0207667_10002136
482 Ga0207667_10045015
483 Ga0207651_10022951
484 Ga0207640_10009098
485 Ga0207640_10044300
486 Ga0207658_10056514
487 Ga0207658_10133118
488 Ga0207703_10150559
489 Ga0207639_10024001
490 Ga0207639_10145525
491 Ga0207678_10005112
492 Ga0207678_10013739
493 Ga0207708_10000864
494 Ga0207702_10000523
495 Ga0207702_10041860
496 Ga0207702_10156560
497 Ga0207641_10062206
498 Ga0207641_10315316
499 Ga0207648_10000608
500 Ga0207648_10107996
501 Ga0207674_10000429
502 Ga0207675_100057844
503 Ga0207675_100084641
504 Ga0207675_100252141
505 Ga0207683_10213894
506 Ga0207698_10015711
507 Ga0209998_10007144
508 Ga0209974_10000642
509 Ga0209974_10006415
510 Ga0207428_10076608
511 Ga0268266_10086368
512 Ga0268264_10058137
513 Ga0265316_10100348
514 Ga0307408_100000908
515 Ga0307408_100002636
516 Ga0316575_10005340
517 Ga0316575_10007825
518 Ga0316575_10027947
519 Ga0316579_10001485
520 Ga0316576_10002064
521 Ga0316576_10003739
522 Ga0316576_10019281
523 Ga0316576_10022848
524 Ga0316576_10027394
525 Ga0316578_10011298
526 Ga0316578_10014746
527 Ga0316578_10030117
528 Ga0316578_10044280
529 Ga0316578_10065224
530 Ga0307405_10011737
531 Ga0316577_10020511
532 Ga0316577_10033291
533 Ga0316577_10104415
534 Ga0307406_10006583
535 Ga0307407_10006879
536 Ga0307412_10032658
537 Ga0307409_100000380
538 Ga0307416_100022661
539 Ga0307414_10043119
540 Ga0307415_100004391
541 Ga0316583_10001959
542 Ga0316583_10007187
543 Ga0316585_10002201
544 Ga0316580_10034064
545 Ga0316593_10000494
546 Ga0316593_10023679
547 Ga0316593_10051259
548 Ga0316592_1000015
549 Ga0316592_1008748
550 Ga0316586_1000242
551 Ga0316586_1009366
552 Ga0316588_1000498
553 Ga0316588_1000545
554 Ga0316588_1003725
555 Ga0316588_1005601
556 Ga0316587_1002182
557 Ga0316596_1002598
558 Ga0316596_1003182
559 Ga0316596_1003245
560 Ga0316574_0000268
561 Ga0316574_0000315
562 Ga0316574_0006363
563 Ga0316574_0014193
564 Ga0316574_0019414
565 Ga0316574_0073820
566 Ga0316574_0171769
567 Ga0373937_0006988
568 Ga0373937_0072670
569 Ga0316582_0013742
570 Ga0316582_0108408
571 Ga0316582_0109468
572 Ga0316584_0003459
573 Ga0316584_0014849
574 Ga0316584_0044348
575 Ga0395899_0138223
576 Ga0395900_0197005
577 Ga0316581_0045652
578 Ga0400484_15928
579 Ga0400490_02176
580 Ga0400488_10208
581 Ga0400488_55174
582 Ga0400483_197721
583 Ga0400483_216636
584 Ga0466963_0195493
585 Ga0495592_0000208
586 Ga0495662_0037823
587 Ga0495608_0000215
588 Ga0495618_0017894
589 Ga0495628_0000828
590 Ga0495630_0007062
591 Ga0495640_0004866
592 Ga0495586_0000295
593 Ga0495587_0038173
594 Ga0495587_0165869
595 Ga0495621_0002058
596 Ga0495667_0013194
597 Ga0495634_0009815
598 Ga0495658_0009536
599 Ga0495613_0008282
600 Ga0495624_0037351
601 Ga0495600_0034077
602 Ga0495604_0004946
603 Ga0495680_0000180
604 Ga0495675_0076272
605 Ga0496101_0250630
606 Ga0496104_0172616
607 Ga0496106_0002076
608 Ga0496107_0035641
609 Ga0496114_0110166
610 Ga0496124_0013500
611 Ga0501040_0000005
612 Ga0501042_0015001
613 Ga0501047_0032676
614 Ga0501073_0059359
615 Ga0501044_0066708
616 nmdc:mga0qj67_155029_c1
617 nmdc:mga08y16_287556_c1
618 nmdc:mga08y16_90207_c1
619 Ga0495601_0018591
620 Ga0495619_0229875
621 2671692528
622 2990199596

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF24621

198

341

0.99

PF01761

DHQ_synthase

3-dehydroquinate synthase

83

197

0.98

PF13685

Fe-ADH_2

Iron-containing alcohol dehydrogenase

33

191

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
3okf-assembly1.cif.gz_B 2.5 angstrom resolution crystal structure of 3-dehydroquinate synthase (arob) from vibrio cholerae 0.965 1 355
3zok-assembly2.cif.gz_C structure of 3-dehydroquinate synthase from actinidia chinensis in complex with nad 0.964 1 355
6lk2-assembly1.cif.gz_C crystal structure of providencia alcalifaciens 3-dehydroquinate synthase (dhqs) in complex with mg2+, nad and chlorogenic acid 0.9595 1 355
6lk2-assembly2.cif.gz_D crystal structure of providencia alcalifaciens 3-dehydroquinate synthase (dhqs) in complex with mg2+, nad and chlorogenic acid 0.9587 1 355
6lk2-assembly1.cif.gz_C crystal structure of providencia alcalifaciens 3-dehydroquinate synthase (dhqs) in complex with mg2+, nad and chlorogenic acid 0.9568 1 355
ID Description Score Start End Superfamily
3okfB02 Mainly Alpha;Up-down Bundle;Dehydroquinate synthase-like, alpha domain;Dehydroquinate synthase-like - alpha domain 0.9717 173 355 1.20.1090.10
af_A0A1D6IPW7_249_439_1.20.1090.10 Mainly Alpha;Up-down Bundle;Dehydroquinate synthase-like, alpha domain;Dehydroquinate synthase-like - alpha domain 0.9622 173 355 1.20.1090.10
af_A0A0R0HLZ4_60_246_3.40.50.1970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9565 2 172 3.40.50.1970
3okfB02 Mainly Alpha;Up-down Bundle;Dehydroquinate synthase-like, alpha domain;Dehydroquinate synthase-like - alpha domain 0.9347 173 355 1.20.1090.10
3qbdB02 Mainly Alpha;Up-down Bundle;Dehydroquinate synthase-like, alpha domain;Dehydroquinate synthase-like - alpha domain 0.9333 173 355 1.20.1090.10
ID Description Score Start End GO Terms
AF-A0A2X1PI66-F1-model_v4 3-dehydroquinate synthase (EC 4.2.3.4) 0.9953 93 204 GO:0003856
GO:0009073
AF-A0A1Y1MIS5-F1-model_v4 3-dehydroquinate synthase domain-containing protein 0.9935 67 166 GO:0003856
GO:0009073
AF-A0A7S1KI02-F1-model_v4 3-dehydroquinate synthase domain-containing protein 0.9918 77 189 GO:0003856
GO:0009073
GO:0016020
AF-A0A658NMV2-F1-model_v4 3-dehydroquinate synthase 0.9914 77 163 GO:0003856
GO:0009073
AF-X1F355-F1-model_v4 3-dehydroquinate synthase domain-containing protein 0.988 112 211 GO:0003856
GO:0009073

Map