F401240
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 311 | 171 | 586 | 436 |
Family's Representative Sequence
| Representative Sequence | 3300025932|Ga0207690_10000439|Ga0207690_1000043921 |
| Length | 482 |
| Sequence | MIQAGIIGFLTAKCLIICSRNVFIGILYSFFRLLKIHTFIGNMSNKNNKKIIRSWAMFDWANSAYNLVITSTIFPAYYVIITTNANTKDKVAFFGHYFVNTALQDYALAAAYMLIVLLLPILTSIADYRGNKKAFMMFFTWLGSLACCGLFKFDIHHLEFGIICFALAAIGYSGGFVFYNSYLPEIATLDKQDSVSAKGFTYGYIGSVLLQLICFAFVLSPKTFGITDASLPARLSFLLVGIWWISFAYIPFTILPKGSPNAVVHNHHIIKGGFIELGNVFAKVKTMPLLKRFLPAIFFYSMGVQTIMLVATGFGAKILHLPTSALISIILIIQLVAIGGANLMSKLSARYGNIPVLAGVVVVWIFTCIAAYFITNATEFYLLAIVVGLVMGGIQSLSRSTYSKYLPQDIPDTASFFSFYDVTEKLAIVTGLLTFGYIEELTGSMRNSTLALCGFFIIGLILLLSLLAAEKKDRNFSQISSR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 2 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 3 | 3300001904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 | Metagenome | Rhizosphere |
| 4 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 5 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 6 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 7 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 8 | 3300002772 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS | Metagenome | Endosphere |
| 9 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 10 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 11 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 12 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 13 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 14 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 15 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 16 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 17 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 18 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 19 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 20 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 22 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 27 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 28 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 29 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 30 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 31 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 32 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 33 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 34 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 35 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 36 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 37 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 38 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 52 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 53 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 54 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 55 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300025208 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 60 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 65 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 66 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 81 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 82 | 3300030731 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 | Metagenome | Rhizosphere |
| 83 | 3300030732 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 | Metagenome | Rhizosphere |
| 84 | 3300030742 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 | Metagenome | Rhizosphere |
| 85 | 3300030744 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 | Metagenome | Rhizosphere |
| 86 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 87 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 88 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 89 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 90 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 91 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 92 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 93 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 94 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 95 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 96 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 97 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 98 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 99 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 100 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 101 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 102 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 123 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 124 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 125 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 127 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 128 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 129 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 130 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 131 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 132 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 133 | 2522125168 | Dyadobacter beijingensis DSM 21582 | Isolate | Rhizosphere |
| 134 | 2585427687 | Pedobacter borealis DSM 19626 | Isolate | Rhizosphere |
| 135 | 2599185184 | Mucilaginibacter sp. NFR10 | Isolate | Rhizoplane |
| 136 | 2738541283 | Pedobacter sp. OK701 | Isolate | Unclassified |
| 137 | 2738541284 | Pedobacter sp. YR016 | Isolate | Unclassified |
| 138 | 2738543023 | Pedobacter sp. OK628 | Isolate | Unclassified |
| 139 | 2739367651 | Pedobacter sp. OK291 | Isolate | Unclassified |
| 140 | 2739367663 | Pedobacter sp. YR510 | Isolate | Unclassified |
| 141 | 2739367866 | Hymenobacter sp. YR204 | Isolate | Unclassified |
| 142 | 2818991437 | Pedobacter terrae 518 | Isolate | Unclassified |
| 143 | 2818991442 | Chitinophaga pinensis 1204 | Isolate | Unclassified |
| 144 | 2818991444 | Filimonas endophytica 3197 | Isolate | Unclassified |
| 145 | 2818991460 | Chitinophaga polysaccharea 1209 | Isolate | Unclassified |
| 146 | 2840677318 | Chitinophaga alhagiae T22 | Isolate | Unclassified |
| 147 | 2842722452 | Pedobacter sp. R-72249 | Isolate | Unclassified |
| 148 | 2842903701 | Olivibacter sp. R-72191 | Isolate | Unclassified |
| 149 | 2842909656 | Pedobacter sp. R-72393 | Isolate | Unclassified |
| 150 | 2849281842 | Pedobacter sp. AK013 | Isolate | Rhizosphere |
| 151 | 2852623160 | Mucilaginibacter sp. AK015 | Isolate | Rhizosphere |
| 152 | 2852627209 | Pedobacter sp. AK017 | Isolate | Rhizosphere |
| 153 | 2857627736 | Pedobacter sp. R-74587 | Isolate | Unclassified |
| 154 | 2884634485 | Algoriphagus kandeliae XY-J91 | Isolate | Unclassified |
| 155 | 2884933994 | Mucilaginibacter sp. 14171R-50 | Isolate | Rhizosphere |
| 156 | 2890737413 | Parapedobacter sp. SGR-10 | Isolate | Rhizosphere |
| 157 | 2896085136 | Chitinophaga alhagiae T22 | Isolate | Unclassified |
| 158 | 2896317667 | Sphingobacterium sp. SGR-19 | Isolate | Rhizosphere |
| 159 | 2898713307 | Sphingobacterium sp. SGG-5 | Isolate | Rhizosphere |
| 160 | 2904445276 | Pedobacter terrae 1734 | Isolate | Rhizosphere |
| 161 | 2919186247 | Pedobacter africanus 2697 | Isolate | Rhizosphere |
| 162 | 2919437846 | Mucilaginibacter pocheonensis 3262 | Isolate | Rhizosphere |
| 163 | 2919692658 | Algoriphagus sp. 4150 | Isolate | Rhizosphere |
| 164 | 2928078545 | Mucilaginibacter rubeus 1215 | Isolate | Unclassified |
| 165 | 2928147474 | Mucilaginibacter rubeus 2025 | Isolate | Unclassified |
| 166 | 2932082852 | Mucilaginibacter sp. 3215 | Isolate | Rhizosphere |
| 167 | 2939664404 | Pedobacter africanus 2990 | Isolate | Rhizosphere |
| 168 | 2945997725 | Pedobacter sp. W3I1 | Isolate | Rhizosphere |
| 169 | 2954016120 | Flavobacterium sp. W4I14 | Isolate | Rhizosphere |
| 170 | 2977232053 | Mucilaginibacter terrae SORGH_AS 422 | Isolate | Unclassified |
| 171 | 3003233435 | Sphingobacterium shayense CrR18 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 86.17 |
| Metatranscriptomes | 0 |
| Isolates | 13.83 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 12.54 |
| Nodule | 0 |
| Rhizoplane | 0.64 |
| Rhizosphere | 72.35 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.32 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0207690_10000439 | 3300025932 | Bacteria | 27079 |
| 2 | SwRhRL2b_contig_344929 | 2162886007 | Bacteria | 12928 |
| 3 | JGI24736J21556_1003964 | 3300001904 | Bacteria | 2548 |
| 4 | JGI24737J22298_10001175 | 3300001990 | Bacteria | 9214 |
| 5 | JGI24735J21928_10000001 | 3300002067 | Bacteria | 650042 |
| 6 | JGI25162J39368_1000020 | 3300002737 | Bacteria | 254723 |
| 7 | JGI25162J39368_1001463 | 3300002737 | Bacteria | 12419 |
| 8 | JGI25157J39369_1003954 | 3300002741 | Bacteria | 2837 |
| 9 | JGI25164J39214_1003137 | 3300002772 | Bacteria | 2196 |
| 10 | JGI25165J46597_1000436 | 3300003214 | Bacteria | 42359 |
| 11 | JGI25165J46597_1003768 | 3300003214 | Bacteria | 3569 |
| 12 | rootH1_10017465 | 3300003316 | Bacteria | 3327 |
| 13 | rootH1_10070458 | 3300003316 | Bacteria | 10680 |
| 14 | rootH2_10044421 | 3300003320 | Bacteria | 8661 |
| 15 | rootH2_10242626 | 3300003320 | Bacteria | 1425 |
| 16 | rootH2_10251160 | 3300003320 | Bacteria | 1924 |
| 17 | rootL2_10121916 | 3300003322 | Bacteria | 2085 |
| 18 | rootH1_10003193 | 3300003323 | Bacteria | 10411 |
| 19 | rootH1_10005674 | 3300003323 | Bacteria | 14366 |
| 20 | rootH1_10006920 | 3300003323 | Bacteria | 63684 |
| 21 | rootH1_10122186 | 3300003323 | Bacteria | 10587 |
| 22 | Ga0055536_1000030 | 3300003781 | Bacteria | 153926 |
| 23 | Ga0055536_1007039 | 3300003781 | Bacteria | 5111 |
| 24 | Ga0055530_10000723 | 3300003791 | Bacteria | 27721 |
| 25 | Ga0065165_1000104 | 3300005262 | Bacteria | 140410 |
| 26 | Ga0065165_1008776 | 3300005262 | Bacteria | 4658 |
| 27 | Ga0065714_10002217 | 3300005288 | Bacteria | 49867 |
| 28 | Ga0065714_10102260 | 3300005288 | Bacteria | 1626 |
| 29 | Ga0065704_10001614 | 3300005289 | Bacteria | 7401 |
| 30 | Ga0065712_10134491 | 3300005290 | Bacteria | 1512 |
| 31 | Ga0070658_10003203 | 3300005327 | Bacteria | 13509 |
| 32 | Ga0070658_10035134 | 3300005327 | Bacteria | 4036 |
| 33 | Ga0070658_10152213 | 3300005327 | Bacteria | 1937 |
| 34 | Ga0070680_100013718 | 3300005336 | Bacteria | 6320 |
| 35 | Ga0070680_100024855 | 3300005336 | Bacteria | 4788 |
| 36 | Ga0070660_100094115 | 3300005339 | Bacteria | 2367 |
| 37 | Ga0070674_100010871 | 3300005356 | Bacteria | 5520 |
| 38 | Ga0070659_100001750 | 3300005366 | Bacteria | 15590 |
| 39 | Ga0070659_100005340 | 3300005366 | Bacteria | 9218 |
| 40 | Ga0070678_100050255 | 3300005456 | Bacteria | 3015 |
| 41 | Ga0070681_10023463 | 3300005458 | Bacteria | 6204 |
| 42 | Ga0070679_100006294 | 3300005530 | Bacteria | 11051 |
| 43 | Ga0070684_100182881 | 3300005535 | Bacteria | 1906 |
| 44 | Ga0068853_100084794 | 3300005539 | Bacteria | 2776 |
| 45 | Ga0068855_100000042 | 3300005563 | Bacteria | 149332 |
| 46 | Ga0068855_100000073 | 3300005563 | Bacteria | 121126 |
| 47 | Ga0068855_100001107 | 3300005563 | Bacteria | 33518 |
| 48 | Ga0068855_100012388 | 3300005563 | Bacteria | 10301 |
| 49 | Ga0068855_100099161 | 3300005563 | Bacteria | 3356 |
| 50 | Ga0068855_100107043 | 3300005563 | Bacteria | 3213 |
| 51 | Ga0068857_100003056 | 3300005577 | Bacteria | 13843 |
| 52 | Ga0068854_100034428 | 3300005578 | Bacteria | 3538 |
| 53 | Ga0068856_100000683 | 3300005614 | Bacteria | 36859 |
| 54 | Ga0068856_100026762 | 3300005614 | Bacteria | 5624 |
| 55 | Ga0068852_100057741 | 3300005616 | Bacteria | 3359 |
| 56 | Ga0068852_100142049 | 3300005616 | Bacteria | 2223 |
| 57 | Ga0068858_100122784 | 3300005842 | Bacteria | 2430 |
| 58 | Ga0068860_100038001 | 3300005843 | Bacteria | 4607 |
| 59 | Ga0075366_10002075 | 3300006195 | Bacteria | 10175 |
| 60 | Ga0075366_10006984 | 3300006195 | Bacteria | 6216 |
| 61 | Ga0105240_10020702 | 3300009093 | Bacteria | 8765 |
| 62 | Ga0105240_10055491 | 3300009093 | Bacteria | 4960 |
| 63 | Ga0105240_10261397 | 3300009093 | Bacteria | 1997 |
| 64 | Ga0105237_10001345 | 3300009545 | Bacteria | 32570 |
| 65 | Ga0105237_10002353 | 3300009545 | Bacteria | 23506 |
| 66 | Ga0105237_10033355 | 3300009545 | Bacteria | 5215 |
| 67 | Ga0105237_10052100 | 3300009545 | Bacteria | 4109 |
| 68 | Ga0105237_10085123 | 3300009545 | Bacteria | 3151 |
| 69 | Ga0105238_10265810 | 3300009551 | Bacteria | 1695 |
| 70 | Ga0105239_10000002 | 3300010375 | Bacteria | 610298 |
| 71 | Ga0105239_10000006 | 3300010375 | Bacteria | 442319 |
| 72 | Ga0105239_10000010 | 3300010375 | Bacteria | 341545 |
| 73 | Ga0105239_10001749 | 3300010375 | Bacteria | 28619 |
| 74 | Ga0105239_10009801 | 3300010375 | Bacteria | 10762 |
| 75 | Ga0105239_10213336 | 3300010375 | Bacteria | 2164 |
| 76 | Ga0157373_10000075 | 3300013100 | Bacteria | 85818 |
| 77 | Ga0157373_10000240 | 3300013100 | Bacteria | 44977 |
| 78 | Ga0157373_10001098 | 3300013100 | Bacteria | 20825 |
| 79 | Ga0157373_10017760 | 3300013100 | Bacteria | 5179 |
| 80 | Ga0157371_10000382 | 3300013102 | Bacteria | 55677 |
| 81 | Ga0157371_10004354 | 3300013102 | Bacteria | 12404 |
| 82 | Ga0157371_10015801 | 3300013102 | Bacteria | 5647 |
| 83 | Ga0157371_10029065 | 3300013102 | Bacteria | 4001 |
| 84 | Ga0157370_10014728 | 3300013104 | Bacteria | 7985 |
| 85 | Ga0157370_10019111 | 3300013104 | Bacteria | 6888 |
| 86 | Ga0157370_10028249 | 3300013104 | Bacteria | 5521 |
| 87 | Ga0157370_10087982 | 3300013104 | Bacteria | 2917 |
| 88 | Ga0157370_10114271 | 3300013104 | Bacteria | 2522 |
| 89 | Ga0157370_10115501 | 3300013104 | Bacteria | 2507 |
| 90 | Ga0157370_10127513 | 3300013104 | Bacteria | 2375 |
| 91 | Ga0157369_10000002 | 3300013105 | Bacteria | 524510 |
| 92 | Ga0157369_10003999 | 3300013105 | Bacteria | 17485 |
| 93 | Ga0157374_10004828 | 3300013296 | Bacteria | 11312 |
| 94 | Ga0163162_10000066 | 3300013306 | Bacteria | 100009 |
| 95 | Ga0163162_10003228 | 3300013306 | Bacteria | 15604 |
| 96 | Ga0163162_10014175 | 3300013306 | Bacteria | 7790 |
| 97 | Ga0163162_10022952 | 3300013306 | Bacteria | 6154 |
| 98 | Ga0163162_10221095 | 3300013306 | Bacteria | 2024 |
| 99 | Ga0157372_10000001 | 3300013307 | Bacteria | 791349 |
| 100 | Ga0157372_10001588 | 3300013307 | Bacteria | 24735 |
| 101 | Ga0157372_10005386 | 3300013307 | Bacteria | 13603 |
| 102 | Ga0157372_10094473 | 3300013307 | Bacteria | 3405 |
| 103 | Ga0157375_10005221 | 3300013308 | Bacteria | 11272 |
| 104 | Ga0157375_10123416 | 3300013308 | Bacteria | 2702 |
| 105 | Ga0157380_10003435 | 3300014326 | Bacteria | 10878 |
| 106 | Ga0182008_10000193 | 3300014497 | Bacteria | 48215 |
| 107 | Ga0182008_10001693 | 3300014497 | Bacteria | 14490 |
| 108 | Ga0182008_10043859 | 3300014497 | Bacteria | 2226 |
| 109 | Ga0182006_1000239 | 3300015261 | Bacteria | 51541 |
| 110 | Ga0182006_1001056 | 3300015261 | Bacteria | 17790 |
| 111 | Ga0182006_1004307 | 3300015261 | Bacteria | 7042 |
| 112 | Ga0182007_10000001 | 3300015262 | Bacteria | 1127301 |
| 113 | Ga0182007_10023935 | 3300015262 | Unclassified | 2142 |
| 114 | Ga0182005_1000042 | 3300015265 | Bacteria | 146854 |
| 115 | Ga0163161_10000843 | 3300017792 | Bacteria | 23929 |
| 116 | Ga0163161_10001017 | 3300017792 | Bacteria | 21369 |
| 117 | Ga0163161_10001191 | 3300017792 | Bacteria | 19552 |
| 118 | Ga0163161_10003003 | 3300017792 | Bacteria | 11917 |
| 119 | Ga0209436_102663 | 3300025208 | Bacteria | 5194 |
| 120 | Ga0207427_100163 | 3300025231 | Bacteria | 74501 |
| 121 | Ga0207427_100359 | 3300025231 | Bacteria | 28547 |
| 122 | Ga0209437_100034 | 3300025233 | Bacteria | 494007 |
| 123 | Ga0209437_100085 | 3300025233 | Bacteria | 254790 |
| 124 | Ga0209437_100101 | 3300025233 | Bacteria | 226668 |
| 125 | Ga0209026_1000279 | 3300025250 | Bacteria | 59283 |
| 126 | Ga0209026_1002888 | 3300025250 | Bacteria | 6052 |
| 127 | Ga0209233_1000038 | 3300025261 | Bacteria | 548972 |
| 128 | Ga0209233_1000124 | 3300025261 | Bacteria | 226743 |
| 129 | Ga0209233_1006693 | 3300025261 | Bacteria | 3696 |
| 130 | Ga0209455_1004242 | 3300025272 | Bacteria | 4773 |
| 131 | Ga0209130_1006047 | 3300025284 | Bacteria | 4023 |
| 132 | Ga0209676_1000001 | 3300025292 | Bacteria | 1852142 |
| 133 | Ga0209676_1000656 | 3300025292 | Bacteria | 49578 |
| 134 | Ga0209050_1000018 | 3300025298 | Bacteria | 723263 |
| 135 | Ga0207426_1000250 | 3300025302 | Bacteria | 117492 |
| 136 | Ga0207426_1005879 | 3300025302 | Bacteria | 5463 |
| 137 | Ga0207647_10000187 | 3300025904 | Bacteria | 50028 |
| 138 | Ga0207705_10000015 | 3300025909 | Bacteria | 382901 |
| 139 | Ga0207705_10068643 | 3300025909 | Bacteria | 2567 |
| 140 | Ga0207705_10068761 | 3300025909 | Bacteria | 2565 |
| 141 | Ga0207707_10005411 | 3300025912 | Bacteria | 11165 |
| 142 | Ga0207707_10014259 | 3300025912 | Bacteria | 6924 |
| 143 | Ga0207695_10023251 | 3300025913 | Bacteria | 7011 |
| 144 | Ga0207695_10083061 | 3300025913 | Bacteria | 3236 |
| 145 | Ga0207695_10097264 | 3300025913 | Bacteria | 2945 |
| 146 | Ga0207671_10001206 | 3300025914 | Bacteria | 30711 |
| 147 | Ga0207671_10002208 | 3300025914 | Bacteria | 21121 |
| 148 | Ga0207671_10002238 | 3300025914 | Bacteria | 20952 |
| 149 | Ga0207671_10008032 | 3300025914 | Bacteria | 9022 |
| 150 | Ga0207671_10093595 | 3300025914 | Bacteria | 2267 |
| 151 | Ga0207671_10170489 | 3300025914 | Bacteria | 1690 |
| 152 | Ga0207660_10025500 | 3300025917 | Bacteria | 4013 |
| 153 | Ga0207652_10005975 | 3300025921 | Bacteria | 9851 |
| 154 | Ga0207650_10190921 | 3300025925 | Bacteria | 1637 |
| 155 | Ga0207644_10005800 | 3300025931 | Bacteria | 8039 |
| 156 | Ga0207690_10001899 | 3300025932 | Bacteria | 12826 |
| 157 | Ga0207690_10023347 | 3300025932 | Bacteria | 3859 |
| 158 | Ga0207691_10201559 | 3300025940 | Bacteria | 1732 |
| 159 | Ga0207667_10000009 | 3300025949 | Bacteria | 603135 |
| 160 | Ga0207667_10000037 | 3300025949 | Bacteria | 297252 |
| 161 | Ga0207667_10002393 | 3300025949 | Bacteria | 23487 |
| 162 | Ga0207667_10050730 | 3300025949 | Bacteria | 4377 |
| 163 | Ga0207702_10000855 | 3300026078 | Bacteria | 31810 |
| 164 | Ga0207674_10118572 | 3300026116 | Bacteria | 2616 |
| 165 | Ga0207698_10042880 | 3300026142 | Bacteria | 3385 |
| 166 | Ga0307517_10009463 | 3300028786 | Bacteria | 13803 |
| 167 | Ga0307515_10000001 | 3300028794 | Bacteria | 4259510 |
| 168 | Ga0307515_10000078 | 3300028794 | Bacteria | 227988 |
| 169 | Ga0307515_10000993 | 3300028794 | Bacteria | 64832 |
| 170 | Ga0307515_10041625 | 3300028794 | Bacteria | 7214 |
| 171 | Ga0316177_1070671 | 3300030731 | Bacteria | 11022 |
| 172 | Ga0316176_1189563 | 3300030732 | Bacteria | 41660 |
| 173 | Ga0316183_1005857 | 3300030742 | Bacteria | 32210 |
| 174 | Ga0316181_1017914 | 3300030744 | Bacteria | 31063 |
| 175 | Ga0307408_100005838 | 3300031548 | Bacteria | 8189 |
| 176 | Ga0307405_10000026 | 3300031731 | Bacteria | 118954 |
| 177 | Ga0307407_10000032 | 3300031903 | Bacteria | 87003 |
| 178 | Ga0307412_10000018 | 3300031911 | Bacteria | 284374 |
| 179 | Ga0307412_10003147 | 3300031911 | Bacteria | 9165 |
| 180 | Ga0307416_100000045 | 3300032002 | Bacteria | 126832 |
| 181 | Ga0307414_10000037 | 3300032004 | Bacteria | 164474 |
| 182 | Ga0307414_10002019 | 3300032004 | Bacteria | 10547 |
| 183 | Ga0307414_10028928 | 3300032004 | Bacteria | 3600 |
| 184 | Ga0307414_10045580 | 3300032004 | Bacteria | 3004 |
| 185 | Ga0307414_10096701 | 3300032004 | Bacteria | 2210 |
| 186 | Ga0307507_10000015 | 3300033179 | Bacteria | 237419 |
| 187 | Ga0395899_0000061 | 3300037312 | Bacteria | 212002 |
| 188 | Ga0395899_0000402 | 3300037312 | Bacteria | 50694 |
| 189 | Ga0395900_0000330 | 3300037418 | Bacteria | 69819 |
| 190 | Ga0395900_0045655 | 3300037418 | Bacteria | 4513 |
| 191 | Ga0395905_0000769 | 3300037471 | Bacteria | 42306 |
| 192 | Ga0395901_0002005 | 3300038443 | Bacteria | 20948 |
| 193 | Ga0439431_0000479 | 3300041997 | Bacteria | 8484 |
| 194 | Ga0451577_0000260 | 3300042876 | Bacteria | 104156 |
| 195 | Ga0453684_0005500 | 3300044712 | Bacteria | 25025 |
| 196 | Ga0453684_0014676 | 3300044712 | Bacteria | 12493 |
| 197 | Ga0466959_0103055 | 3300045049 | Bacteria | 2042 |
| 198 | Ga0466958_0003915 | 3300045836 | Bacteria | 7801 |
| 199 | Ga0495650_0000013 | 3300046471 | Bacteria | 611135 |
| 200 | Ga0495585_0000408 | 3300046492 | Bacteria | 41651 |
| 201 | Ga0495585_0001310 | 3300046492 | Bacteria | 19822 |
| 202 | Ga0495583_0014723 | 3300046506 | Bacteria | 4296 |
| 203 | Ga0495606_0000010 | 3300046507 | Bacteria | 299893 |
| 204 | Ga0495606_0018051 | 3300046507 | Bacteria | 5306 |
| 205 | Ga0495606_0033980 | 3300046507 | Bacteria | 3508 |
| 206 | Ga0495606_0047581 | 3300046507 | Bacteria | 2826 |
| 207 | Ga0495610_0000370 | 3300046512 | Bacteria | 46662 |
| 208 | Ga0495610_0000472 | 3300046512 | Bacteria | 41524 |
| 209 | Ga0495610_0002683 | 3300046512 | Bacteria | 14668 |
| 210 | Ga0495616_0005831 | 3300046513 | Bacteria | 7521 |
| 211 | Ga0495616_0009716 | 3300046513 | Bacteria | 5607 |
| 212 | Ga0495637_0041172 | 3300046520 | Bacteria | 1984 |
| 213 | Ga0495648_0006808 | 3300046524 | Bacteria | 9234 |
| 214 | Ga0495609_0099584 | 3300046538 | Bacteria | 1260 |
| 215 | Ga0495633_0000044 | 3300046558 | Bacteria | 171185 |
| 216 | Ga0495633_0007082 | 3300046558 | Bacteria | 6522 |
| 217 | Ga0495668_0000012 | 3300046616 | Bacteria | 458817 |
| 218 | Ga0495625_0000100 | 3300046660 | Bacteria | 139983 |
| 219 | Ga0495625_0003478 | 3300046660 | Bacteria | 15644 |
| 220 | Ga0495625_0013457 | 3300046660 | Bacteria | 6575 |
| 221 | Ga0495625_0051426 | 3300046660 | Bacteria | 2954 |
| 222 | Ga0495625_0053410 | 3300046660 | Bacteria | 2889 |
| 223 | Ga0495625_0070447 | 3300046660 | Bacteria | 2455 |
| 224 | Ga0495661_0003399 | 3300046665 | Bacteria | 11768 |
| 225 | Ga0495661_0031591 | 3300046665 | Bacteria | 3358 |
| 226 | Ga0495649_0000002 | 3300046694 | Bacteria | 1093458 |
| 227 | Ga0495589_0031051 | 3300046794 | Bacteria | 2690 |
| 228 | Ga0495660_0036552 | 3300046810 | Bacteria | 2739 |
| 229 | Ga0495660_0059941 | 3300046810 | Bacteria | 2046 |
| 230 | Ga0495683_0054912 | 3300047323 | Bacteria | 1984 |
| 231 | Ga0495687_000875 | 3300047443 | Bacteria | 31919 |
| 232 | Ga0495687_004328 | 3300047443 | Bacteria | 9661 |
| 233 | Ga0495686_0000264 | 3300047472 | Bacteria | 93838 |
| 234 | Ga0495686_0004195 | 3300047472 | Bacteria | 11969 |
| 235 | Ga0495686_0064970 | 3300047472 | Bacteria | 2257 |
| 236 | Ga0495614_0023247 | 3300048089 | Bacteria | 2674 |
| 237 | Ga0496122_0005753 | 3300048925 | Bacteria | 14605 |
| 238 | Ga0496123_0003415 | 3300048926 | Bacteria | 17873 |
| 239 | Ga0496125_0035466 | 3300048928 | Bacteria | 4374 |
| 240 | Ga0501034_0000007 | 3300049571 | Bacteria | 357805 |
| 241 | nmdc:mga0k408_41_c1 | 3300050493 | Bacteria | 56836 |
| 242 | nmdc:mga0k408_8517_c1 | 3300050493 | Bacteria | 5508 |
| 243 | Ga0500635_0001784 | 3300053080 | Bacteria | 5242 |
| 244 | Ga0500651_0000173 | 3300053093 | Bacteria | 41524 |
| 245 | Ga0500562_000086 | 3300053108 | Bacteria | 38952 |
| 246 | Ga0500608_007252 | 3300053122 | Bacteria | 4575 |
| 247 | Ga0500618_000002 | 3300053125 | Bacteria | 370822 |
| 248 | Ga0500622_0000706 | 3300053156 | Bacteria | 29322 |
| 249 | Ga0500622_0000948 | 3300053156 | Bacteria | 24673 |
| 250 | Ga0500622_0005363 | 3300053156 | Bacteria | 7719 |
| 251 | 2522551946 | 2522125168 | Bacteria | 7376607 |
| 252 | 2586210340 | 2585427687 | Bacteria | 5544917 |
| 253 | 2599477494 | 2599185184 | Bacteria | 6430550 |
| 254 | 2599477498 | 2599185184 | Bacteria | 6430550 |
| 255 | 2738757621 | 2738541283 | Bacteria | 7222293 |
| 256 | 2738760881 | 2738541284 | Bacteria | 5199923 |
| 257 | 2739303962 | 2738543023 | Bacteria | 6767879 |
| 258 | 2739588850 | 2739367651 | Bacteria | 6359826 |
| 259 | 2739645235 | 2739367663 | Bacteria | 5040914 |
| 260 | 2740033340 | 2739367866 | Bacteria | 4215900 |
| 261 | 2819548828 | 2818991437 | Bacteria | 5805520 |
| 262 | 2819577218 | 2818991442 | Bacteria | 8318214 |
| 263 | 2819586353 | 2818991444 | Bacteria | 6968812 |
| 264 | 2819676362 | 2818991460 | Bacteria | 7595395 |
| 265 | 2840679292 | 2840677318 | Bacteria | 2664183 |
| 266 | 2842726302 | 2842722452 | Bacteria | 6263924 |
| 267 | 2842906997 | 2842903701 | Bacteria | 6986368 |
| 268 | 2842910556 | 2842909656 | Bacteria | 6185908 |
| 269 | 2849282192 | 2849281842 | Bacteria | 6065644 |
| 270 | 2852623715 | 2852623160 | Bacteria | 4376875 |
| 271 | 2852627309 | 2852627209 | Bacteria | 5896285 |
| 272 | 2857629005 | 2857627736 | Bacteria | 5625397 |
| 273 | 2884637180 | 2884634485 | Bacteria | 3928637 |
| 274 | 2884937380 | 2884933994 | Bacteria | 4535041 |
| 275 | 2890740461 | 2890737413 | Bacteria | 4269751 |
| 276 | 2896087103 | 2896085136 | Bacteria | 6129793 |
| 277 | 2896317924 | 2896317667 | Bacteria | 4606601 |
| 278 | 2898715050 | 2898713307 | Bacteria | 4110805 |
| 279 | 2904445530 | 2904445276 | Bacteria | 5310396 |
| 280 | 2919187343 | 2919186247 | Bacteria | 6244071 |
| 281 | 2919441148 | 2919437846 | Bacteria | 6199444 |
| 282 | 2919695379 | 2919692658 | Bacteria | 5943958 |
| 283 | 2928079407 | 2928078545 | Bacteria | 6534839 |
| 284 | 2928079411 | 2928078545 | Bacteria | 6534839 |
| 285 | 2928148107 | 2928147474 | Bacteria | 6512076 |
| 286 | 2928148111 | 2928147474 | Bacteria | 6512076 |
| 287 | 2932083999 | 2932082852 | Bacteria | 6563563 |
| 288 | 2932084003 | 2932082852 | Bacteria | 6563563 |
| 289 | 2939665389 | 2939664404 | Bacteria | 6364494 |
| 290 | 2946000867 | 2945997725 | Bacteria | 6404843 |
| 291 | 2954017777 | 2954016120 | Bacteria | 6446024 |
| 292 | 2977232066 | 2977232053 | Bacteria | 5485925 |
| 293 | 3003235378 | 3003233435 | Bacteria | 4458031 |
| 294 | Ga0207690_10000439 | |||
| 295 | SwRhRL2b_contig_344929 | |||
| 296 | JGI24736J21556_1003964 | |||
| 297 | JGI24737J22298_10001175 | |||
| 298 | JGI24735J21928_10000001 | |||
| 299 | JGI25162J39368_1000020 | |||
| 300 | JGI25162J39368_1001463 | |||
| 301 | JGI25157J39369_1003954 | |||
| 302 | JGI25164J39214_1003137 | |||
| 303 | JGI25165J46597_1000436 | |||
| 304 | JGI25165J46597_1003768 | |||
| 305 | rootH1_10017465 | |||
| 306 | rootH1_10070458 | |||
| 307 | rootH2_10044421 | |||
| 308 | rootH2_10242626 | |||
| 309 | rootH2_10251160 | |||
| 310 | rootL2_10121916 | |||
| 311 | rootH1_10003193 | |||
| 312 | rootH1_10005674 | |||
| 313 | rootH1_10006920 | |||
| 314 | rootH1_10122186 | |||
| 315 | Ga0055536_1000030 | |||
| 316 | Ga0055536_1007039 | |||
| 317 | Ga0055530_10000723 | |||
| 318 | Ga0065165_1000104 | |||
| 319 | Ga0065165_1008776 | |||
| 320 | Ga0065714_10002217 | |||
| 321 | Ga0065714_10102260 | |||
| 322 | Ga0065704_10001614 | |||
| 323 | Ga0065712_10134491 | |||
| 324 | Ga0070658_10003203 | |||
| 325 | Ga0070658_10035134 | |||
| 326 | Ga0070658_10152213 | |||
| 327 | Ga0070680_100013718 | |||
| 328 | Ga0070680_100024855 | |||
| 329 | Ga0070660_100094115 | |||
| 330 | Ga0070674_100010871 | |||
| 331 | Ga0070659_100001750 | |||
| 332 | Ga0070659_100005340 | |||
| 333 | Ga0070678_100050255 | |||
| 334 | Ga0070681_10023463 | |||
| 335 | Ga0070679_100006294 | |||
| 336 | Ga0070684_100182881 | |||
| 337 | Ga0068853_100084794 | |||
| 338 | Ga0068855_100000042 | |||
| 339 | Ga0068855_100000073 | |||
| 340 | Ga0068855_100001107 | |||
| 341 | Ga0068855_100012388 | |||
| 342 | Ga0068855_100099161 | |||
| 343 | Ga0068855_100107043 | |||
| 344 | Ga0068857_100003056 | |||
| 345 | Ga0068854_100034428 | |||
| 346 | Ga0068856_100000683 | |||
| 347 | Ga0068856_100026762 | |||
| 348 | Ga0068852_100057741 | |||
| 349 | Ga0068852_100142049 | |||
| 350 | Ga0068858_100122784 | |||
| 351 | Ga0068860_100038001 | |||
| 352 | Ga0075366_10002075 | |||
| 353 | Ga0075366_10006984 | |||
| 354 | Ga0105240_10020702 | |||
| 355 | Ga0105240_10055491 | |||
| 356 | Ga0105240_10261397 | |||
| 357 | Ga0105237_10001345 | |||
| 358 | Ga0105237_10002353 | |||
| 359 | Ga0105237_10033355 | |||
| 360 | Ga0105237_10052100 | |||
| 361 | Ga0105237_10085123 | |||
| 362 | Ga0105238_10265810 | |||
| 363 | Ga0105239_10000002 | |||
| 364 | Ga0105239_10000006 | |||
| 365 | Ga0105239_10000010 | |||
| 366 | Ga0105239_10001749 | |||
| 367 | Ga0105239_10009801 | |||
| 368 | Ga0105239_10213336 | |||
| 369 | Ga0157373_10000075 | |||
| 370 | Ga0157373_10000240 | |||
| 371 | Ga0157373_10001098 | |||
| 372 | Ga0157373_10017760 | |||
| 373 | Ga0157371_10000382 | |||
| 374 | Ga0157371_10004354 | |||
| 375 | Ga0157371_10015801 | |||
| 376 | Ga0157371_10029065 | |||
| 377 | Ga0157370_10014728 | |||
| 378 | Ga0157370_10019111 | |||
| 379 | Ga0157370_10028249 | |||
| 380 | Ga0157370_10087982 | |||
| 381 | Ga0157370_10114271 | |||
| 382 | Ga0157370_10115501 | |||
| 383 | Ga0157370_10127513 | |||
| 384 | Ga0157369_10000002 | |||
| 385 | Ga0157369_10003999 | |||
| 386 | Ga0157374_10004828 | |||
| 387 | Ga0163162_10000066 | |||
| 388 | Ga0163162_10003228 | |||
| 389 | Ga0163162_10014175 | |||
| 390 | Ga0163162_10022952 | |||
| 391 | Ga0163162_10221095 | |||
| 392 | Ga0157372_10000001 | |||
| 393 | Ga0157372_10001588 | |||
| 394 | Ga0157372_10005386 | |||
| 395 | Ga0157372_10094473 | |||
| 396 | Ga0157375_10005221 | |||
| 397 | Ga0157375_10123416 | |||
| 398 | Ga0157380_10003435 | |||
| 399 | Ga0182008_10000193 | |||
| 400 | Ga0182008_10001693 | |||
| 401 | Ga0182008_10043859 | |||
| 402 | Ga0182006_1000239 | |||
| 403 | Ga0182006_1001056 | |||
| 404 | Ga0182006_1004307 | |||
| 405 | Ga0182007_10000001 | |||
| 406 | Ga0182007_10023935 | |||
| 407 | Ga0182005_1000042 | |||
| 408 | Ga0163161_10000843 | |||
| 409 | Ga0163161_10001017 | |||
| 410 | Ga0163161_10001191 | |||
| 411 | Ga0163161_10003003 | |||
| 412 | Ga0209436_102663 | |||
| 413 | Ga0207427_100163 | |||
| 414 | Ga0207427_100359 | |||
| 415 | Ga0209437_100034 | |||
| 416 | Ga0209437_100085 | |||
| 417 | Ga0209437_100101 | |||
| 418 | Ga0209026_1000279 | |||
| 419 | Ga0209026_1002888 | |||
| 420 | Ga0209233_1000038 | |||
| 421 | Ga0209233_1000124 | |||
| 422 | Ga0209233_1006693 | |||
| 423 | Ga0209455_1004242 | |||
| 424 | Ga0209130_1006047 | |||
| 425 | Ga0209676_1000001 | |||
| 426 | Ga0209676_1000656 | |||
| 427 | Ga0209050_1000018 | |||
| 428 | Ga0207426_1000250 | |||
| 429 | Ga0207426_1005879 | |||
| 430 | Ga0207647_10000187 | |||
| 431 | Ga0207705_10000015 | |||
| 432 | Ga0207705_10068643 | |||
| 433 | Ga0207705_10068761 | |||
| 434 | Ga0207707_10005411 | |||
| 435 | Ga0207707_10014259 | |||
| 436 | Ga0207695_10023251 | |||
| 437 | Ga0207695_10083061 | |||
| 438 | Ga0207695_10097264 | |||
| 439 | Ga0207671_10001206 | |||
| 440 | Ga0207671_10002208 | |||
| 441 | Ga0207671_10002238 | |||
| 442 | Ga0207671_10008032 | |||
| 443 | Ga0207671_10093595 | |||
| 444 | Ga0207671_10170489 | |||
| 445 | Ga0207660_10025500 | |||
| 446 | Ga0207652_10005975 | |||
| 447 | Ga0207650_10190921 | |||
| 448 | Ga0207644_10005800 | |||
| 449 | Ga0207690_10001899 | |||
| 450 | Ga0207690_10023347 | |||
| 451 | Ga0207691_10201559 | |||
| 452 | Ga0207667_10000009 | |||
| 453 | Ga0207667_10000037 | |||
| 454 | Ga0207667_10002393 | |||
| 455 | Ga0207667_10050730 | |||
| 456 | Ga0207702_10000855 | |||
| 457 | Ga0207674_10118572 | |||
| 458 | Ga0207698_10042880 | |||
| 459 | Ga0307517_10009463 | |||
| 460 | Ga0307515_10000001 | |||
| 461 | Ga0307515_10000078 | |||
| 462 | Ga0307515_10000993 | |||
| 463 | Ga0307515_10041625 | |||
| 464 | Ga0316177_1070671 | |||
| 465 | Ga0316176_1189563 | |||
| 466 | Ga0316183_1005857 | |||
| 467 | Ga0316181_1017914 | |||
| 468 | Ga0307408_100005838 | |||
| 469 | Ga0307405_10000026 | |||
| 470 | Ga0307407_10000032 | |||
| 471 | Ga0307412_10000018 | |||
| 472 | Ga0307412_10003147 | |||
| 473 | Ga0307416_100000045 | |||
| 474 | Ga0307414_10000037 | |||
| 475 | Ga0307414_10002019 | |||
| 476 | Ga0307414_10028928 | |||
| 477 | Ga0307414_10045580 | |||
| 478 | Ga0307414_10096701 | |||
| 479 | Ga0307507_10000015 | |||
| 480 | Ga0395899_0000061 | |||
| 481 | Ga0395899_0000402 | |||
| 482 | Ga0395900_0000330 | |||
| 483 | Ga0395900_0045655 | |||
| 484 | Ga0395905_0000769 | |||
| 485 | Ga0395901_0002005 | |||
| 486 | Ga0439431_0000479 | |||
| 487 | Ga0451577_0000260 | |||
| 488 | Ga0453684_0005500 | |||
| 489 | Ga0453684_0014676 | |||
| 490 | Ga0466959_0103055 | |||
| 491 | Ga0466958_0003915 | |||
| 492 | Ga0495650_0000013 | |||
| 493 | Ga0495585_0000408 | |||
| 494 | Ga0495585_0001310 | |||
| 495 | Ga0495583_0014723 | |||
| 496 | Ga0495606_0000010 | |||
| 497 | Ga0495606_0018051 | |||
| 498 | Ga0495606_0033980 | |||
| 499 | Ga0495606_0047581 | |||
| 500 | Ga0495610_0000370 | |||
| 501 | Ga0495610_0000472 | |||
| 502 | Ga0495610_0002683 | |||
| 503 | Ga0495616_0005831 | |||
| 504 | Ga0495616_0009716 | |||
| 505 | Ga0495637_0041172 | |||
| 506 | Ga0495648_0006808 | |||
| 507 | Ga0495609_0099584 | |||
| 508 | Ga0495633_0000044 | |||
| 509 | Ga0495633_0007082 | |||
| 510 | Ga0495668_0000012 | |||
| 511 | Ga0495625_0000100 | |||
| 512 | Ga0495625_0003478 | |||
| 513 | Ga0495625_0013457 | |||
| 514 | Ga0495625_0051426 | |||
| 515 | Ga0495625_0053410 | |||
| 516 | Ga0495625_0070447 | |||
| 517 | Ga0495661_0003399 | |||
| 518 | Ga0495661_0031591 | |||
| 519 | Ga0495649_0000002 | |||
| 520 | Ga0495589_0031051 | |||
| 521 | Ga0495660_0036552 | |||
| 522 | Ga0495660_0059941 | |||
| 523 | Ga0495683_0054912 | |||
| 524 | Ga0495687_000875 | |||
| 525 | Ga0495687_004328 | |||
| 526 | Ga0495686_0000264 | |||
| 527 | Ga0495686_0004195 | |||
| 528 | Ga0495686_0064970 | |||
| 529 | Ga0495614_0023247 | |||
| 530 | Ga0496122_0005753 | |||
| 531 | Ga0496123_0003415 | |||
| 532 | Ga0496125_0035466 | |||
| 533 | Ga0501034_0000007 | |||
| 534 | nmdc:mga0k408_41_c1 | |||
| 535 | nmdc:mga0k408_8517_c1 | |||
| 536 | Ga0500635_0001784 | |||
| 537 | Ga0500651_0000173 | |||
| 538 | Ga0500562_000086 | |||
| 539 | Ga0500608_007252 | |||
| 540 | Ga0500618_000002 | |||
| 541 | Ga0500622_0000706 | |||
| 542 | Ga0500622_0000948 | |||
| 543 | Ga0500622_0005363 | |||
| 544 | 2522551946 | |||
| 545 | 2586210340 | |||
| 546 | 2599477494 | |||
| 547 | 2599477498 | |||
| 548 | 2738757621 | |||
| 549 | 2738760881 | |||
| 550 | 2739303962 | |||
| 551 | 2739588850 | |||
| 552 | 2739645235 | |||
| 553 | 2740033340 | |||
| 554 | 2819548828 | |||
| 555 | 2819577218 | |||
| 556 | 2819586353 | |||
| 557 | 2819676362 | |||
| 558 | 2840679292 | |||
| 559 | 2842726302 | |||
| 560 | 2842906997 | |||
| 561 | 2842910556 | |||
| 562 | 2849282192 | |||
| 563 | 2852623715 | |||
| 564 | 2852627309 | |||
| 565 | 2857629005 | |||
| 566 | 2884637180 | |||
| 567 | 2884937380 | |||
| 568 | 2890740461 | |||
| 569 | 2896087103 | |||
| 570 | 2896317924 | |||
| 571 | 2898715050 | |||
| 572 | 2904445530 | |||
| 573 | 2919187343 | |||
| 574 | 2919441148 | |||
| 575 | 2919695379 | |||
| 576 | 2928079407 | |||
| 577 | 2928079411 | |||
| 578 | 2928148107 | |||
| 579 | 2928148111 | |||
| 580 | 2932083999 | |||
| 581 | 2932084003 | |||
| 582 | 2939665389 | |||
| 583 | 2946000867 | |||
| 584 | 2954017777 | |||
| 585 | 2977232066 | |||
| 586 | 3003235378 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6kkj-assembly1.cif.gz_B | crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation | 0.8231 | 6 | 424 |
| 6kkj-assembly1.cif.gz_B | crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation | 0.8127 | 6 | 424 |
| 6kki-assembly1.cif.gz_A | crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward-occluded conformation | 0.7872 | 8 | 424 |
| 8thr-assembly1.cif.gz_A | structure of the human vesicular monoamine transporter 2 (vmat2) bound to tetrabenazine in an occluded conformation | 0.7804 | 8 | 424 |
| 8hpk-assembly1.cif.gz_A | crystal structure of the bacterial oxalate transporter oxlt in an oxalate-bound occluded form | 0.7776 | 9 | 421 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_O06171_250_435_1.20.1250.20 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.9178 | 243 | 422 | 1.20.1250.20 |
| af_Q2FXH1_4_180_1.20.1250.20 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.893 | 246 | 422 | 1.20.1250.20 |
| af_P25568_311_508_1.20.1250.20 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.8893 | 243 | 421 | 1.20.1250.20 |
| af_P77589_213_398_1.20.1250.20 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.8837 | 247 | 430 | 1.20.1250.20 |
| af_A0A1D8PQ72_272_455_1.20.1250.20 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.8836 | 247 | 426 | 1.20.1250.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A832VPX7-F1-model_v4 | MFS transporter | 0.8874 | 3 | 329 |
GO:0012505
GO:0016020 |
| AF-A0A3L6JK06-F1-model_v4 | Major facilitator superfamily (MFS) profile domain-containing protein | 0.8754 | 145 | 424 |
GO:0012505
GO:0016020 GO:0022857 |
| AF-A0A127SW18-F1-model_v4 | MFS_1 | 0.8607 | 249 | 430 |
GO:0005886
GO:0006811 GO:0022857 |
| AF-A0A7J5C3T4-F1-model_v4 | MFS transporter | 0.8529 | 7 | 422 |
GO:0012505
GO:0016020 GO:0022857 |
| AF-A0A127SW18-F1-model_v4 | MFS_1 | 0.848 | 249 | 430 |
GO:0005886
GO:0006811 GO:0022857 |