F401322

General Info

Members Datasets Scaffolds Average Seq Length
311 252 622 493

Family's Representative Sequence

Representative Sequence 3300041405|Ga0439438_000012|Ga0439438_000012_120350_121810
Length 456
Sequence MPYQEMQLLPIAGEWRKGSSGNLLKVTDPFTGETLLEIVQADRDDLDQAYIAAEQAQAAWASMGPGQRSAILLRAVQIFDERREEIVDWIIRESGSTRIKAQIEWGAARGITQESASFPARVHGRILPSNVPGKENRVYREPLGVVGVISPWNFPLHLTQRSVAPALALGNAVVIKPASDTPVTGGLLTARIFEEAGVPKGVISVLVGSGAQIGDAFVEHHIPKFISFTGSTPVGLNIGRIASGGKHLKHVALELGGNSPFVVLADADLDQAVAAAVMGKFLHQGQICMAINRIIVEDALYDRFVELYAAKVRTLKVGNPKDADTVIGPIINRKQLEGLLIKVSRAKEEGARAVVEGEAEGNLLPPHVFADVTADMEYGLSSAVFTKDPERGARFARQIKAGMTHVNDIPVNDEAHAPFGGEKNSGLGRFNGEWAIEEFTTDHWISVQMTPRTYPF

Samples

Sample ID Description Type Environment
1 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
6 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
11 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
12 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
27 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
36 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
45 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
53 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
54 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
55 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
56 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
58 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
59 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
60 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
87 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
88 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
89 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
90 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
91 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
92 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
97 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
98 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
99 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
100 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
101 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
102 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
103 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
106 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
107 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
108 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
109 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
110 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
111 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
112 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
113 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
114 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
115 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
116 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
117 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
118 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
119 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
120 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
121 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
122 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
123 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
124 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
125 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
126 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
127 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
128 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
129 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
130 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
131 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
132 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
133 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
134 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
135 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
136 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
137 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
138 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
139 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
140 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
141 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
142 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
143 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
144 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
145 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
148 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
149 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
150 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
151 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
165 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
166 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
167 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
168 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
171 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
172 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
173 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
174 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
175 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
176 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
177 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
178 2511231006 Pseudomonas sp. GM17 Isolate Nodule
179 2511231018 Pseudomonas sp. GM60 Isolate Nodule
180 2511231021 Pseudomonas sp. GM78 Isolate Nodule
181 2512047018 Pseudomonas chlororaphis chlororaphis GP72 Isolate Rhizosphere
182 2554235132 Pseudomonas aeruginosa PGPR2 Isolate Unclassified
183 2554235341 Pseudomonas protegens CHA0 Isolate Rhizosphere
184 2582580891 Pseudomonas chlororaphis YL-1 Isolate Unclassified
185 2597489887 Pseudomonas chlororaphis aureofaciens 30-84 Isolate Rhizosphere
186 2599185160 Pseudomonas sp. NFPP25 Isolate Rhizoplane
187 2599185161 Pseudomonas sp. NFPP09 Isolate Rhizoplane
188 2599185162 Pseudomonas sp. NFPP10 Isolate Rhizoplane
189 2599185163 Pseudomonas sp. NFPP12 Isolate Rhizoplane
190 2599185164 Pseudomonas sp. NFPP13 Isolate Rhizoplane
191 2599185165 Pseudomonas sp. NFPP18 Isolate Rhizoplane
192 2599185166 Pseudomonas sp. NFPP08 Isolate Rhizoplane
193 2599185168 Pseudomonas sp. NFPP05 Isolate Rhizoplane
194 2599185181 Pseudomonas sp. NFPP17 Isolate Rhizoplane
195 2599185182 Pseudomonas sp. NFPP19 Isolate Rhizoplane
196 2599185185 Pseudomonas sp. NFPP07 Isolate Rhizoplane
197 2599185186 Pseudomonas sp. NFPP15 Isolate Rhizoplane
198 2599185212 Pseudomonas sp. NFACC15-1 Isolate Rhizoplane
199 2599185257 Pseudomonas sp. NFACC41-3 Isolate Rhizoplane
200 2599185317 Pseudomonas sp. NFACC06-1 Isolate Rhizoplane
201 2599185322 Pseudomonas sp. NFACC14 Isolate Rhizoplane
202 2599185356 Pseudomonas sp. NFPP14 Isolate Rhizoplane
203 2600254930 Pseudomonas sp. NFIX10 Isolate Rhizoplane
204 2600255256 Enterobacter sp. NFIX08 Isolate Rhizoplane
205 2600255257 Enterobacter sp. NFIX03 Isolate Rhizoplane
206 2600255310 Enterobacter sp. NFIX06 Isolate Rhizoplane
207 2600255311 Enterobacter sp. NFIX04 Isolate Rhizoplane
208 2600255313 Pseudomonas sp. NFPP16 Isolate Rhizoplane
209 2602042046 Enterobacter sp. NFIX09 Isolate Rhizoplane
210 2606217733 Pseudomonas aeruginosa NFHH01 Isolate Rhizoplane
211 2667528171 Pseudomonas sp. NFPP22 Isolate Rhizoplane
212 2671180172 Pseudomonas sp. NFIX51 Isolate Rhizoplane
213 2740892503 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
214 2773857673 Pseudomonas sp. 443 Isolate Unclassified
215 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
216 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
217 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
218 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
219 2814123068 Kosakonia radicincitans GXGL-4A Isolate Rhizosphere
220 2818991464 Pseudomonas protegens 3295 Isolate Rhizosphere
221 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
222 2844665904 Pseudomonas protegens H1F10C Isolate Unclassified
223 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
224 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
225 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
226 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
227 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
228 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
229 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
230 2917070673 Pseudomonas protegens CHA0 Isolate Rhizosphere
231 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
232 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
233 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
234 2919108558 Klebsiella sp. 1400 Isolate Rhizosphere
235 2919697872 Pseudomonas frederiksbergensis 4169 Isolate Unclassified
236 2923153595 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
237 2923586266 Pseudomonas fluorescens 1550 Isolate Rhizosphere
238 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
239 2935353572 Pseudomonas protegens TECH19 Isolate Unclassified
240 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
241 2984286254 Pseudomonas chlororaphis aurantiaca JD37 Isolate Rhizosphere
242 2984559226 Klebsiella variicola SORGH_AS834 Isolate Aerial Root
243 2984568884 Acinetobacter baylyi SORGH_AS893 Isolate Aerial Root
244 2984595703 Klebsiella variicola SORGH_AS1070 Isolate Aerial Root
245 3007395558 Pseudomonas chlororaphis PCL1601 Isolate Rhizosphere
246 637000220 Pseudomonas protegens Pf-5 Isolate Rhizoplane
247 8015687852 Pseudomonas chlororaphis aurantiaca RP4 Isolate Rhizosphere
248 8019769354 Pseudomonas sp. MSSRFD41 Isolate Rhizosphere
249 8019775933 Pseudomonas sp. PvR083 Isolate Rhizosphere
250 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule
251 8055770955 Pseudomonas chlororaphis qlu-1 Isolate Rhizosphere
252 8056131705 Pseudomonas asgharzadehiana SWRI132 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75.88
Metatranscriptomes 0
Isolates 24.12

Biome Distribution

Category Percentage (%)
Aerial Root 0.96
Bulb 0
Endosphere 4.82
Nodule 1.61
Rhizoplane 9.32
Rhizosphere 72.99
Stem 0
Stem Tuber 0
Unclassified 0.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439438_000012 3300041405 Bacteria 132114
2 LJQas_1000002 3300000549 Bacteria 48568
3 JGI24751J29686_10000082 3300002459 Bacteria 53568
4 JGI25162J39368_1000030 3300002737 Bacteria 218717
5 JGI25163J39215_1000247 3300002771 Bacteria 19799
6 JGI25164J39214_1000123 3300002772 Bacteria 74810
7 JGI25165J46597_1000056 3300003214 Bacteria 218721
8 rootL2_10057068 3300003322 Bacteria 21869
9 rootH1_10019360 3300003323 Bacteria 13001
10 Ga0055530_10000087 3300003791 Bacteria 79565
11 Ga0055540_1000297 3300003792 Bacteria 43953
12 Ga0065714_10002571 3300005288 Bacteria 15200
13 Ga0065712_10067925 3300005290 Bacteria 20547
14 Ga0068869_100051783 3300005334 Unclassified 2979
15 Ga0070689_100040164 3300005340 Bacteria 3586
16 Ga0070659_100006517 3300005366 Bacteria 8429
17 Ga0070659_100048132 3300005366 Bacteria 3348
18 Ga0070703_10016284 3300005406 Bacteria 2133
19 Ga0070705_100015187 3300005440 Bacteria 3975
20 Ga0070694_100025314 3300005444 Bacteria 3838
21 Ga0070708_100145279 3300005445 Bacteria 2202
22 Ga0070662_100097651 3300005457 Bacteria 2217
23 Ga0070681_10069773 3300005458 Bacteria 3480
24 Ga0070698_100013763 3300005471 Bacteria 8563
25 Ga0070698_100186281 3300005471 Bacteria 2013
26 Ga0070704_100009101 3300005549 Bacteria 5992
27 Ga0070664_100006208 3300005564 Bacteria 9656
28 Ga0081538_10023955 3300005981 Bacteria 4367
29 Ga0075432_10000718 3300006058 Bacteria 10227
30 Ga0075432_10000755 3300006058 Bacteria 10036
31 Ga0075366_10001749 3300006195 Bacteria 10928
32 Ga0068871_100115755 3300006358 Bacteria 2260
33 Ga0075430_100087647 3300006846 Bacteria 2605
34 Ga0075431_100034033 3300006847 Bacteria 5251
35 Ga0075433_10124681 3300006852 Bacteria 2288
36 Ga0075434_100122197 3300006871 Bacteria 2620
37 Ga0075434_100126890 3300006871 Unclassified 2568
38 Ga0068865_100125129 3300006881 Bacteria 1918
39 Ga0105251_10002390 3300009011 Bacteria 14833
40 Ga0105244_10003012 3300009036 Bacteria 12359
41 Ga0111539_10000281 3300009094 Bacteria 61050
42 Ga0111539_10017176 3300009094 Bacteria 8957
43 Ga0111539_10055953 3300009094 Bacteria 4690
44 Ga0105245_10167565 3300009098 Bacteria 2089
45 Ga0114129_10028611 3300009147 Bacteria 7895
46 Ga0114129_10103626 3300009147 Bacteria 3934
47 Ga0105243_10004199 3300009148 Bacteria 11415
48 Ga0105243_10006835 3300009148 Bacteria 8792
49 Ga0105243_10009150 3300009148 Bacteria 7564
50 Ga0105242_10000024 3300009176 Bacteria 111115
51 Ga0105242_10036303 3300009176 Bacteria 3953
52 Ga0105242_10086916 3300009176 Bacteria 2625
53 Ga0105237_10066486 3300009545 Bacteria 3600
54 Ga0105249_10205568 3300009553 Bacteria 1929
55 Ga0105246_10012367 3300011119 Bacteria 5322
56 Ga0157371_10000198 3300013102 Bacteria 88364
57 Ga0157369_10007866 3300013105 Bacteria 12260
58 Ga0157374_10221074 3300013296 Bacteria 1858
59 Ga0157378_10146115 3300013297 Bacteria 2199
60 Ga0157372_10134892 3300013307 Bacteria 2842
61 Ga0182008_10001998 3300014497 Bacteria 13092
62 Ga0157379_10157539 3300014968 Bacteria 2049
63 Ga0182006_1001516 3300015261 Bacteria 13904
64 Ga0182007_10006585 3300015262 Bacteria 4976
65 Ga0182005_1001415 3300015265 Bacteria 9708
66 Ga0213876_10000121 3300021384 Bacteria 84704
67 Ga0209760_100261 3300025207 Bacteria 19924
68 Ga0207427_100022 3300025231 Bacteria 469701
69 Ga0209437_100002 3300025233 Bacteria 1574801
70 Ga0209233_1000004 3300025261 Bacteria 1574798
71 Ga0209676_1000003 3300025292 Bacteria 1454178
72 Ga0209050_1000004 3300025298 Bacteria 1600040
73 Ga0209051_1000052 3300025303 Bacteria 283346
74 Ga0207713_1010498 3300025735 Bacteria 5120
75 Ga0207653_10008524 3300025885 Bacteria 3194
76 Ga0207710_10000838 3300025900 Bacteria 16570
77 Ga0207688_10025329 3300025901 Bacteria 3257
78 Ga0207647_10013753 3300025904 Bacteria 5604
79 Ga0207645_10020122 3300025907 Bacteria 4369
80 Ga0207643_10016984 3300025908 Bacteria 3972
81 Ga0207684_10167790 3300025910 Bacteria 1892
82 Ga0207662_10005888 3300025918 Bacteria 6576
83 Ga0207657_10013897 3300025919 Bacteria 7878
84 Ga0207646_10009290 3300025922 Bacteria 9727
85 Ga0207650_10000010 3300025925 Bacteria 454110
86 Ga0207706_10044763 3300025933 Bacteria 3922
87 Ga0207686_10000756 3300025934 Bacteria 19880
88 Ga0207709_10002990 3300025935 Bacteria 10287
89 Ga0207709_10003255 3300025935 Bacteria 9736
90 Ga0207691_10026930 3300025940 Bacteria 5394
91 Ga0207689_10001314 3300025942 Bacteria 23937
92 Ga0207689_10022079 3300025942 Bacteria 5352
93 Ga0207708_10010412 3300026075 Bacteria 6903
94 Ga0207648_10054886 3300026089 Bacteria 3479
95 Ga0207674_10065904 3300026116 Bacteria 3650
96 Ga0207675_100068399 3300026118 Bacteria 3319
97 Ga0209371_1000002 3300027312 Bacteria 1551985
98 Ga0207428_10019710 3300027907 Bacteria 5747
99 Ga0207428_10038309 3300027907 Bacteria 3898
100 Ga0268256_1000002 3300030500 Bacteria 1535763
101 Ga0307408_100023080 3300031548 Bacteria 4234
102 Ga0307408_100028066 3300031548 Bacteria 3886
103 Ga0307516_10091499 3300031730 Bacteria 2870
104 Ga0307405_10013478 3300031731 Bacteria 4363
105 Ga0307405_10036111 3300031731 Bacteria 2958
106 Ga0307410_10037349 3300031852 Bacteria 3172
107 Ga0307407_10019019 3300031903 Bacteria 3489
108 Ga0307412_10001218 3300031911 Bacteria 14632
109 Ga0307412_10012094 3300031911 Bacteria 5018
110 Ga0307409_100038206 3300031995 Bacteria 3548
111 Ga0307416_100002661 3300032002 Bacteria 10349
112 Ga0307416_100007917 3300032002 Bacteria 6804
113 Ga0307416_100021641 3300032002 Bacteria 4622
114 Ga0395898_0084326 3300037466 Bacteria 3063
115 Ga0436365_0571259 3300039437 Bacteria 81924
116 Ga0436365_1771768 3300039437 Bacteria 1816
117 Ga0439442_001017 3300042002 Bacteria 5669
118 Ga0439463_000094 3300042016 Bacteria 20846
119 Ga0439463_000284 3300042016 Bacteria 14023
120 Ga0450903_006746 3300042138 Bacteria 1901
121 Ga0450907_005686 3300042146 Bacteria 2099
122 Ga0450908_011864 3300042184 Bacteria 1588
123 Ga0439460_0000016 3300042461 Bacteria 24833
124 Ga0466959_0103230 3300045049 Unclassified 2040
125 Ga0451576_0012670 3300045051 Bacteria 9466
126 Ga0451576_0384398 3300045051 Bacteria 1471
127 Ga0495617_000066 3300046452 Bacteria 92026
128 Ga0495617_007555 3300046452 Bacteria 3769
129 Ga0495638_0000625 3300046460 Bacteria 39160
130 Ga0495638_0000806 3300046460 Bacteria 33072
131 Ga0495638_0005374 3300046460 Bacteria 9553
132 Ga0495580_0026965 3300046472 Bacteria 4184
133 Ga0495605_0005635 3300046474 Bacteria 7277
134 Ga0495639_0000097 3300046475 Bacteria 42919
135 Ga0495639_0011247 3300046475 Bacteria 3855
136 Ga0495584_0039994 3300046491 Bacteria 2368
137 Ga0495585_0034186 3300046492 Bacteria 2874
138 Ga0495594_0000258 3300046499 Bacteria 25800
139 Ga0495607_0001626 3300046501 Bacteria 19473
140 Ga0495620_0000104 3300046515 Bacteria 67620
141 Ga0495632_0000213 3300046519 Bacteria 58845
142 Ga0495632_0004724 3300046519 Bacteria 9189
143 Ga0495632_0008711 3300046519 Bacteria 6188
144 Ga0495637_0000196 3300046520 Bacteria 47174
145 Ga0495637_0001564 3300046520 Bacteria 13323
146 Ga0495643_0000527 3300046522 Bacteria 47772
147 Ga0495643_0012695 3300046522 Bacteria 5073
148 Ga0495644_0000006 3300046523 Bacteria 113088
149 Ga0495648_0000178 3300046524 Bacteria 73793
150 Ga0495648_0000667 3300046524 Bacteria 36648
151 Ga0495648_0010394 3300046524 Bacteria 7092
152 Ga0495666_0019904 3300046526 Bacteria 3329
153 Ga0495654_0024132 3300046530 Bacteria 3145
154 Ga0495654_0077147 3300046530 Bacteria 1569
155 Ga0495586_0007733 3300046535 Bacteria 5732
156 Ga0495586_0033405 3300046535 Bacteria 2761
157 Ga0495609_0000288 3300046538 Bacteria 46408
158 Ga0495597_0049364 3300046542 Bacteria 1859
159 Ga0495622_0000239 3300046557 Bacteria 42783
160 Ga0495611_0001656 3300046648 Bacteria 10809
161 Ga0495611_0029315 3300046648 Bacteria 2413
162 Ga0495625_0001234 3300046660 Bacteria 32301
163 Ga0495661_0007115 3300046665 Bacteria 7812
164 Ga0495588_0014093 3300046674 Bacteria 3821
165 Ga0495588_0046497 3300046674 Bacteria 2226
166 Ga0495671_0007213 3300046692 Bacteria 6355
167 Ga0495671_0032621 3300046692 Bacteria 2658
168 Ga0495649_0000304 3300046694 Bacteria 43073
169 Ga0495649_0012786 3300046694 Bacteria 4868
170 Ga0495660_0003731 3300046810 Bacteria 9351
171 Ga0495660_0006054 3300046810 Bacteria 7183
172 Ga0495672_0000271 3300047320 Bacteria 71554
173 Ga0495672_0001770 3300047320 Bacteria 20766
174 Ga0495680_0004357 3300047322 Bacteria 13559
175 Ga0495683_0014716 3300047323 Bacteria 4075
176 Ga0495687_001282 3300047443 Bacteria 23671
177 Ga0495687_003867 3300047443 Bacteria 10525
178 Ga0495677_0013218 3300047445 Bacteria 3004
179 Ga0495673_0000551 3300047469 Bacteria 38267
180 Ga0495673_0009936 3300047469 Bacteria 5216
181 Ga0495673_0018805 3300047469 Bacteria 3476
182 Ga0495681_0003832 3300047470 Bacteria 10407
183 Ga0495681_0004067 3300047470 Bacteria 10060
184 Ga0495593_0013620 3300047673 Bacteria 4635
185 Ga0495626_0000847 3300048091 Bacteria 27355
186 Ga0496110_0028708 3300048913 Bacteria 4781
187 Ga0496116_0000010 3300048919 Bacteria 665608
188 Ga0496116_0022607 3300048919 Bacteria 4708
189 Ga0496116_0044405 3300048919 Bacteria 3019
190 Ga0496117_0001039 3300048920 Bacteria 42336
191 Ga0496117_0002152 3300048920 Bacteria 25713
192 Ga0496118_0018432 3300048921 Bacteria 6300
193 Ga0496121_0000050 3300048924 Bacteria 318295
194 Ga0496122_0007569 3300048925 Bacteria 12017
195 Ga0496123_0003756 3300048926 Bacteria 16651
196 Ga0496124_0001825 3300048927 Bacteria 29428
197 Ga0495678_006478 3300049459 Bacteria 6226
198 Ga0501031_0066062 3300049568 Bacteria 2357
199 Ga0501032_0003991 3300049569 Bacteria 11196
200 Ga0501032_0062972 3300049569 Bacteria 2484
201 Ga0501033_0005359 3300049570 Bacteria 10164
202 Ga0501036_0000998 3300049572 Bacteria 21378
203 Ga0501036_0001964 3300049572 Bacteria 15954
204 Ga0501037_0024585 3300049573 Bacteria 4454
205 Ga0501038_0003382 3300049574 Bacteria 14871
206 Ga0501038_0024823 3300049574 Bacteria 5344
207 Ga0501038_0127738 3300049574 Bacteria 2090
208 Ga0501039_0002628 3300049575 Bacteria 13412
209 Ga0501039_0052561 3300049575 Bacteria 3152
210 Ga0501040_0006958 3300049576 Bacteria 7326
211 Ga0501042_0011572 3300049578 Bacteria 5957
212 Ga0501043_0004582 3300049579 Bacteria 11213
213 Ga0501046_0018811 3300049580 Bacteria 5738
214 Ga0501047_0048967 3300049581 Bacteria 4080
215 Ga0501048_0011364 3300049582 Bacteria 6640
216 Ga0501068_0016150 3300049584 Bacteria 4300
217 Ga0501075_0127289 3300049591 Bacteria 1940
218 Ga0501077_0113736 3300049593 Bacteria 1716
219 Ga0501240_000037 3300049673 Bacteria 8633
220 Ga0501035_0000673 3300049822 Bacteria 37395
221 Ga0501035_0028607 3300049822 Bacteria 5087
222 Ga0501044_0003021 3300049823 Bacteria 19037
223 Ga0501044_0042697 3300049823 Bacteria 4714
224 Ga0501045_0002353 3300049824 Bacteria 12838
225 nmdc:mga0k408_6145_c1 3300050493 Bacteria 6406
226 nmdc:mga05p37_109019_c1 3300050507 Bacteria 3406
227 nmdc:mga05p37_330559_c1 3300050507 Bacteria 1801
228 nmdc:mga05p37_333084_c1 3300050507 Bacteria 1792
229 nmdc:mga06r32_28347_c1 3300050510 Bacteria 5238
230 nmdc:mga06r32_47220_c1 3300050510 Bacteria 4112
231 nmdc:mga08y16_1879_c1 3300050511 Bacteria 21364
232 nmdc:mga08y16_74423_c1 3300050511 Bacteria 3539
233 nmdc:mga0n895_119310_c1 3300050512 Bacteria 2658
234 nmdc:mga0n895_55446_c1 3300050512 Bacteria 3901
235 nmdc:mga0a205_79636_c1 3300050515 Bacteria 3166
236 Ga0501084_0044255 3300054114 Bacteria 3727
237 2511268360 2511231006 Bacteria 6794709
238 2511335752 2511231018 Bacteria 6436256
239 2511359750 2511231021 Bacteria 7302637
240 2512329334 2512047018 Bacteria 6663241
241 2554817927 2554235132 Bacteria 6772433
242 2555670452 2554235341 Bacteria 6867980
243 2583791877 2582580891 Bacteria 6800976
244 2597857709 2597489887 Bacteria 6666321
245 2599352516 2599185160 Bacteria 6844013
246 2599358864 2599185161 Bacteria 6960462
247 2599365615 2599185162 Bacteria 6957254
248 2599371507 2599185163 Bacteria 6995158
249 2599377624 2599185164 Bacteria 6841688
250 2599384999 2599185165 Bacteria 6843250
251 2599390416 2599185166 Bacteria 6959206
252 2599402550 2599185168 Bacteria 6997636
253 2599459350 2599185181 Bacteria 6844519
254 2599466362 2599185182 Bacteria 6883168
255 2599484366 2599185185 Bacteria 6652270
256 2599488371 2599185186 Bacteria 6831633
257 2599615770 2599185212 Bacteria 6765997
258 2599802366 2599185257 Bacteria 6492581
259 2600031762 2599185317 Bacteria 6435722
260 2600061420 2599185322 Bacteria 6763055
261 2600211952 2599185356 Bacteria 6843884
262 2600361467 2600254930 Bacteria 6431253
263 2601535964 2600255256 Bacteria 5597742
264 2601540488 2600255257 Bacteria 5597196
265 2601758958 2600255310 Bacteria 5600903
266 2601764860 2600255311 Bacteria 5598766
267 2601772120 2600255313 Bacteria 6842543
268 2603637158 2602042046 Bacteria 5483348
269 2608380759 2606217733 Bacteria 6360972
270 2671095959 2667528171 Bacteria 6900659
271 2671770016 2671180172 Bacteria 6495783
272 2743737126 2740892503 Bacteria 6855563
273 2774135938 2773857673 Bacteria 6513460
274 2775655786 2775506735 Bacteria 4556596
275 2776910918 2775507049 Bacteria 6284736
276 2809128575 2808606415 Bacteria 4576710
277 2809148196 2808606419 Bacteria 4576925
278 2814695716 2814123068 Bacteria 5687681
279 2819700606 2818991464 Bacteria 6907494
280 2842203312 2842198810 Bacteria 6608673
281 2844671068 2844665904 Bacteria 6817974
282 2852620385 2852618963 Bacteria 4577824
283 2852685307 2852684882 Bacteria 5463342
284 2899804742 2899803654 Bacteria 5577784
285 2904497219 2904497146 Bacteria 4731781
286 2904589615 2904584206 Bacteria 6028872
287 2904595264 2904589729 Bacteria 6113573
288 2904606340 2904601388 Bacteria 5884906
289 2917074278 2917070673 Bacteria 6868303
290 2919037836 2919034639 Bacteria 4763403
291 2919050129 2919046199 Bacteria 5567169
292 2919084983 2919079590 Bacteria 5946433
293 2919111140 2919108558 Bacteria 5897419
294 2919698459 2919697872 Bacteria 6553725
295 2923156159 2923153595 Bacteria 6870622
296 2923588654 2923586266 Bacteria 6565975
297 2928134177 2928130867 Bacteria 5467269
298 2935355659 2935353572 Unclassified 6955622
299 2945958666 2945956166 Bacteria 5110334
300 2984289863 2984286254 Bacteria 6702062
301 2984563391 2984559226 Bacteria 5683096
302 2984571315 2984568884 Bacteria 3884413
303 2984596125 2984595703 Bacteria 5682994
304 3007401683 3007395558 Bacteria 6755444
305 637320813 637000220 Bacteria 7074893
306 8015690383 8015687852 Bacteria 6613826
307 8019775433 8019769354 Bacteria 6924660
308 8019781706 8019775933 Bacteria 6858656
309 8023683593 8023680758 Bacteria 7729763
310 8055773510 8055770955 Bacteria 6827675
311 8056133995 8056131705 Bacteria 6107031
312 Ga0439438_000012
313 LJQas_1000002
314 JGI24751J29686_10000082
315 JGI25162J39368_1000030
316 JGI25163J39215_1000247
317 JGI25164J39214_1000123
318 JGI25165J46597_1000056
319 rootL2_10057068
320 rootH1_10019360
321 Ga0055530_10000087
322 Ga0055540_1000297
323 Ga0065714_10002571
324 Ga0065712_10067925
325 Ga0068869_100051783
326 Ga0070689_100040164
327 Ga0070659_100006517
328 Ga0070659_100048132
329 Ga0070703_10016284
330 Ga0070705_100015187
331 Ga0070694_100025314
332 Ga0070708_100145279
333 Ga0070662_100097651
334 Ga0070681_10069773
335 Ga0070698_100013763
336 Ga0070698_100186281
337 Ga0070704_100009101
338 Ga0070664_100006208
339 Ga0081538_10023955
340 Ga0075432_10000718
341 Ga0075432_10000755
342 Ga0075366_10001749
343 Ga0068871_100115755
344 Ga0075430_100087647
345 Ga0075431_100034033
346 Ga0075433_10124681
347 Ga0075434_100122197
348 Ga0075434_100126890
349 Ga0068865_100125129
350 Ga0105251_10002390
351 Ga0105244_10003012
352 Ga0111539_10000281
353 Ga0111539_10017176
354 Ga0111539_10055953
355 Ga0105245_10167565
356 Ga0114129_10028611
357 Ga0114129_10103626
358 Ga0105243_10004199
359 Ga0105243_10006835
360 Ga0105243_10009150
361 Ga0105242_10000024
362 Ga0105242_10036303
363 Ga0105242_10086916
364 Ga0105237_10066486
365 Ga0105249_10205568
366 Ga0105246_10012367
367 Ga0157371_10000198
368 Ga0157369_10007866
369 Ga0157374_10221074
370 Ga0157378_10146115
371 Ga0157372_10134892
372 Ga0182008_10001998
373 Ga0157379_10157539
374 Ga0182006_1001516
375 Ga0182007_10006585
376 Ga0182005_1001415
377 Ga0213876_10000121
378 Ga0209760_100261
379 Ga0207427_100022
380 Ga0209437_100002
381 Ga0209233_1000004
382 Ga0209676_1000003
383 Ga0209050_1000004
384 Ga0209051_1000052
385 Ga0207713_1010498
386 Ga0207653_10008524
387 Ga0207710_10000838
388 Ga0207688_10025329
389 Ga0207647_10013753
390 Ga0207645_10020122
391 Ga0207643_10016984
392 Ga0207684_10167790
393 Ga0207662_10005888
394 Ga0207657_10013897
395 Ga0207646_10009290
396 Ga0207650_10000010
397 Ga0207706_10044763
398 Ga0207686_10000756
399 Ga0207709_10002990
400 Ga0207709_10003255
401 Ga0207691_10026930
402 Ga0207689_10001314
403 Ga0207689_10022079
404 Ga0207708_10010412
405 Ga0207648_10054886
406 Ga0207674_10065904
407 Ga0207675_100068399
408 Ga0209371_1000002
409 Ga0207428_10019710
410 Ga0207428_10038309
411 Ga0268256_1000002
412 Ga0307408_100023080
413 Ga0307408_100028066
414 Ga0307516_10091499
415 Ga0307405_10013478
416 Ga0307405_10036111
417 Ga0307410_10037349
418 Ga0307407_10019019
419 Ga0307412_10001218
420 Ga0307412_10012094
421 Ga0307409_100038206
422 Ga0307416_100002661
423 Ga0307416_100007917
424 Ga0307416_100021641
425 Ga0395898_0084326
426 Ga0436365_0571259
427 Ga0436365_1771768
428 Ga0439442_001017
429 Ga0439463_000094
430 Ga0439463_000284
431 Ga0450903_006746
432 Ga0450907_005686
433 Ga0450908_011864
434 Ga0439460_0000016
435 Ga0466959_0103230
436 Ga0451576_0012670
437 Ga0451576_0384398
438 Ga0495617_000066
439 Ga0495617_007555
440 Ga0495638_0000625
441 Ga0495638_0000806
442 Ga0495638_0005374
443 Ga0495580_0026965
444 Ga0495605_0005635
445 Ga0495639_0000097
446 Ga0495639_0011247
447 Ga0495584_0039994
448 Ga0495585_0034186
449 Ga0495594_0000258
450 Ga0495607_0001626
451 Ga0495620_0000104
452 Ga0495632_0000213
453 Ga0495632_0004724
454 Ga0495632_0008711
455 Ga0495637_0000196
456 Ga0495637_0001564
457 Ga0495643_0000527
458 Ga0495643_0012695
459 Ga0495644_0000006
460 Ga0495648_0000178
461 Ga0495648_0000667
462 Ga0495648_0010394
463 Ga0495666_0019904
464 Ga0495654_0024132
465 Ga0495654_0077147
466 Ga0495586_0007733
467 Ga0495586_0033405
468 Ga0495609_0000288
469 Ga0495597_0049364
470 Ga0495622_0000239
471 Ga0495611_0001656
472 Ga0495611_0029315
473 Ga0495625_0001234
474 Ga0495661_0007115
475 Ga0495588_0014093
476 Ga0495588_0046497
477 Ga0495671_0007213
478 Ga0495671_0032621
479 Ga0495649_0000304
480 Ga0495649_0012786
481 Ga0495660_0003731
482 Ga0495660_0006054
483 Ga0495672_0000271
484 Ga0495672_0001770
485 Ga0495680_0004357
486 Ga0495683_0014716
487 Ga0495687_001282
488 Ga0495687_003867
489 Ga0495677_0013218
490 Ga0495673_0000551
491 Ga0495673_0009936
492 Ga0495673_0018805
493 Ga0495681_0003832
494 Ga0495681_0004067
495 Ga0495593_0013620
496 Ga0495626_0000847
497 Ga0496110_0028708
498 Ga0496116_0000010
499 Ga0496116_0022607
500 Ga0496116_0044405
501 Ga0496117_0001039
502 Ga0496117_0002152
503 Ga0496118_0018432
504 Ga0496121_0000050
505 Ga0496122_0007569
506 Ga0496123_0003756
507 Ga0496124_0001825
508 Ga0495678_006478
509 Ga0501031_0066062
510 Ga0501032_0003991
511 Ga0501032_0062972
512 Ga0501033_0005359
513 Ga0501036_0000998
514 Ga0501036_0001964
515 Ga0501037_0024585
516 Ga0501038_0003382
517 Ga0501038_0024823
518 Ga0501038_0127738
519 Ga0501039_0002628
520 Ga0501039_0052561
521 Ga0501040_0006958
522 Ga0501042_0011572
523 Ga0501043_0004582
524 Ga0501046_0018811
525 Ga0501047_0048967
526 Ga0501048_0011364
527 Ga0501068_0016150
528 Ga0501075_0127289
529 Ga0501077_0113736
530 Ga0501240_000037
531 Ga0501035_0000673
532 Ga0501035_0028607
533 Ga0501044_0003021
534 Ga0501044_0042697
535 Ga0501045_0002353
536 nmdc:mga0k408_6145_c1
537 nmdc:mga05p37_109019_c1
538 nmdc:mga05p37_330559_c1
539 nmdc:mga05p37_333084_c1
540 nmdc:mga06r32_28347_c1
541 nmdc:mga06r32_47220_c1
542 nmdc:mga08y16_1879_c1
543 nmdc:mga08y16_74423_c1
544 nmdc:mga0n895_119310_c1
545 nmdc:mga0n895_55446_c1
546 nmdc:mga0a205_79636_c1
547 Ga0501084_0044255
548 2511268360
549 2511335752
550 2511359750
551 2512329334
552 2554817927
553 2555670452
554 2583791877
555 2597857709
556 2599352516
557 2599358864
558 2599365615
559 2599371507
560 2599377624
561 2599384999
562 2599390416
563 2599402550
564 2599459350
565 2599466362
566 2599484366
567 2599488371
568 2599615770
569 2599802366
570 2600031762
571 2600061420
572 2600211952
573 2600361467
574 2601535964
575 2601540488
576 2601758958
577 2601764860
578 2601772120
579 2603637158
580 2608380759
581 2671095959
582 2671770016
583 2743737126
584 2774135938
585 2775655786
586 2776910918
587 2809128575
588 2809148196
589 2814695716
590 2819700606
591 2842203312
592 2844671068
593 2852620385
594 2852685307
595 2899804742
596 2904497219
597 2904589615
598 2904595264
599 2904606340
600 2917074278
601 2919037836
602 2919050129
603 2919084983
604 2919111140
605 2919698459
606 2923156159
607 2923588654
608 2928134177
609 2935355659
610 2945958666
611 2984289863
612 2984563391
613 2984571315
614 2984596125
615 3007401683
616 637320813
617 8015690383
618 8019775433
619 8019781706
620 8023683593
621 8055773510
622 8056133995

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

15

377

0.98

PF00171

Aldedh

Aldehyde dehydrogenase family

375

445

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3r64-assembly1.cif.gz_C crystal structure of a nad-dependent benzaldehyde dehydrogenase from corynebacterium glutamicum 0.9832 20 492
3r64-assembly1.cif.gz_A crystal structure of a nad-dependent benzaldehyde dehydrogenase from corynebacterium glutamicum 0.9815 20 492
3r64-assembly1.cif.gz_B crystal structure of a nad-dependent benzaldehyde dehydrogenase from corynebacterium glutamicum 0.9814 20 492
3r64-assembly1.cif.gz_D crystal structure of a nad-dependent benzaldehyde dehydrogenase from corynebacterium glutamicum 0.9803 20 491
4dng-assembly1.cif.gz_B crystal structure of putative aldehyde dehydrogenase from bacillus subtilis subsp. subtilis str. 168 0.9802 20 492
ID Description Score Start End Superfamily
3r64D01 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9849 20 270 3.40.605.10
4dngB02 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9784 271 452 3.40.309.10
4dngB01 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9778 20 270 3.40.605.10
4dngB02 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.973 271 452 3.40.309.10
af_Q4DYS1_27_279_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9724 22 273 3.40.605.10
ID Description Score Start End GO Terms
AF-A0A371MRL2-F1-model_v4 Aldehyde dehydrogenase 0.9848 45 245 GO:0016491
AF-A0A3E2NVX9-F1-model_v4 Aldehyde dehydrogenase family protein 0.9835 17 500 GO:0016620
AF-A0A5C7F4K6-F1-model_v4 Aldehyde dehydrogenase family protein 0.9792 17 500 GO:0016620
AF-A0A5C7F4K6-F1-model_v4 Aldehyde dehydrogenase family protein 0.9772 17 500 GO:0016620
AF-A0A3M8HBX0-F1-model_v4 Aldehyde dehydrogenase family protein 0.977 18 500 GO:0016620

Map