F401368

General Info

Members Datasets Scaffolds Average Seq Length
311 204 622 442

Family's Representative Sequence

Representative Sequence 3300046506|Ga0495583_0013254|Ga0495583_0013254_12_1424
Length 470
Sequence MPSGKNQRNPGASALLSNDNFLKGIPMSRILHRSLRQTLPVAAGGQGIYVRDSQGQTYIDASGGAAVSSLGHGHPDVIAAMHAQIDRCAYAHTAFFTTEPAEQLADRLVAQAPAGIGGVYLVSGGSEAMETALKLARQYFVEGGEEQRTLFIGRRQSYHGNTLGALAVGGNEWRRKPFAPLLMDVPRVAPCYEYRDRLEGQTTAQYTGMLLDELEATILLVDPERVIGFCAEPVVGATGGAIPPTPDYFRGVRTLCDKYGILFIADEVMCGMGRTGTMYAIEQDGVAPDLIAVAKGLGAGYAPIGAVLANGAIVERLRGGSGVFLHGHTYIGHPVAAAAALAVQQVIERDDLLVQVQKRGATLRRMLGDVFGAHPHVGDIRGRGLFMALELVRDRATKEPFAPELKLHAAIKREAMARGLMVYPMGGTIDGRSGDHVLLAPPFIVSAGELSEIVSRLEDAVNSAVKQVAI

Samples

Sample ID Description Type Environment
1 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
21 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
33 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
34 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
35 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
36 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
48 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
49 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
50 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
51 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
52 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
53 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
54 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
55 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
56 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
57 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
58 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
59 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
60 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
61 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
62 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
63 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
64 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
65 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
66 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
67 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
68 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
69 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
70 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
71 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
72 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
73 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
74 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
75 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
76 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
77 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
78 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
79 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
80 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
81 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
82 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
83 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
84 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
85 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
86 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
87 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
88 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
89 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
90 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
91 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
92 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
93 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
94 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
95 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
96 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
97 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
98 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
99 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
100 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
101 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
102 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
103 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
104 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
105 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
106 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
107 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
108 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
109 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
110 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
111 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
112 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
115 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
116 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
117 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
118 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
119 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
120 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
121 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
122 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
123 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
124 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
125 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
126 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
127 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
128 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
129 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
130 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
131 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
132 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
133 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
134 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
135 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
136 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
137 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
138 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
139 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
140 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
141 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
142 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
143 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
144 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
145 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
146 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
147 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
148 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
149 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
150 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
151 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
152 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
153 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
154 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
155 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
156 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
157 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
158 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
159 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
160 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
161 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
162 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
163 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
164 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
165 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
166 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
167 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
170 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
171 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
172 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
173 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
174 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
175 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
176 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
177 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
178 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
179 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
180 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
181 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
182 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
183 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
184 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
185 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
186 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
187 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
188 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
189 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
190 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
191 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
192 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
193 2855730933 Achromobacter sp. HZ28 Isolate Nodule
194 2855767633 Achromobacter sp. HZ34 Isolate Nodule
195 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
196 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
197 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
198 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
199 2924784321 Mesorhizobium sp. M4B.F.Ca.ET.143.01.1.1 Isolate Nodule
200 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
201 8006926726 Bradyrhizobium guangdongense SM32 Isolate Unclassified
202 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
203 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere
204 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.21
Metatranscriptomes 0.32
Isolates 5.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.36
Nodule 3.54
Rhizoplane 4.82
Rhizosphere 78.14
Stem 0
Stem Tuber 0
Unclassified 0.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495583_0013254 3300046506 Bacteria 4609
2 JGI25151J46595_10000131 3300003187 Bacteria 100435
3 JGI25406J46586_10000138 3300003203 Bacteria 31765
4 JGI25406J46586_10012291 3300003203 Bacteria 3723
5 Ga0065165_1016462 3300005262 Bacteria 2767
6 Ga0070683_100008627 3300005329 Bacteria 8661
7 Ga0070680_100150424 3300005336 Bacteria 1954
8 Ga0070667_100199089 3300005367 Bacteria 1777
9 Ga0070711_100173896 3300005439 Bacteria 1643
10 Ga0070711_100190502 3300005439 Bacteria 1576
11 Ga0070681_10077159 3300005458 Bacteria 3289
12 Ga0070706_100001219 3300005467 Bacteria 27538
13 Ga0070698_100109060 3300005471 Bacteria 2735
14 Ga0070679_100092108 3300005530 Bacteria 3019
15 Ga0070684_100014090 3300005535 Bacteria 6465
16 Ga0070684_100016083 3300005535 Bacteria 6111
17 Ga0070672_100115072 3300005543 Bacteria 2196
18 Ga0068855_100073040 3300005563 Bacteria 3986
19 Ga0068852_100011370 3300005616 Bacteria 6698
20 Ga0068851_10001994 3300005834 Bacteria 8990
21 Ga0081455_10002308 3300005937 Bacteria 22737
22 Ga0081539_10000008 3300005985 Bacteria 525071
23 Ga0081539_10000676 3300005985 Bacteria 68392
24 Ga0070716_100074191 3300006173 Bacteria 2009
25 Ga0070712_100018240 3300006175 Bacteria 4554
26 Ga0075367_10030650 3300006178 Bacteria 3084
27 Ga0075366_10080850 3300006195 Bacteria 1940
28 Ga0075428_100000852 3300006844 Bacteria 32086
29 Ga0075429_100106323 3300006880 Bacteria 2451
30 Ga0099794_10016290 3300007265 Bacteria 3292
31 Ga0105240_10011282 3300009093 Bacteria 12454
32 Ga0105240_10044259 3300009093 Bacteria 5658
33 Ga0111539_10041647 3300009094 Bacteria 5520
34 Ga0105248_10080211 3300009177 Bacteria 3668
35 Ga0105237_10032333 3300009545 Bacteria 5297
36 Ga0105238_10006047 3300009551 Bacteria 12001
37 Ga0171463_1002 3300013249 Bacteria 1274851
38 Ga0157374_10039043 3300013296 Bacteria 4367
39 Ga0157379_10119426 3300014968 Bacteria 2371
40 Ga0183363_1256 3300015690 Bacteria 8838
41 Ga0209025_1000028 3300025294 Bacteria 490678
42 Ga0209025_1000133 3300025294 Bacteria 195885
43 Ga0207684_10104193 3300025910 Bacteria 2425
44 Ga0207693_10040376 3300025915 Bacteria 3676
45 Ga0207693_10049082 3300025915 Bacteria 3314
46 Ga0207663_10096008 3300025916 Bacteria 1979
47 Ga0207657_10032188 3300025919 Bacteria 4741
48 Ga0207657_10131949 3300025919 Bacteria 2047
49 Ga0207652_10052915 3300025921 Bacteria 3487
50 Ga0207652_10086757 3300025921 Bacteria 2744
51 Ga0207665_10031628 3300025939 Bacteria 3502
52 Ga0207711_10127028 3300025941 Bacteria 2282
53 Ga0207661_10012799 3300025944 Bacteria 6111
54 Ga0207667_10025604 3300025949 Bacteria 6454
55 Ga0209588_1009897 3300027671 Bacteria 2858
56 Ga0307515_10051817 3300028794 Bacteria 6107
57 Ga0307515_10080931 3300028794 Bacteria 4226
58 Ga0265330_10020242 3300031235 Bacteria 3040
59 Ga0307513_10000037 3300031456 Bacteria 175364
60 Ga0373936_0003384 3300035113 Bacteria 5977
61 Ga0373936_0048073 3300035113 Bacteria 1722
62 Ga0373953_0011726 3300035117 Bacteria 3086
63 Ga0373955_0025594 3300035172 Bacteria 3033
64 Ga0373935_0001072 3300035692 Bacteria 14919
65 Ga0395899_0016188 3300037312 Bacteria 5683
66 Ga0395899_0018559 3300037312 Bacteria 5285
67 Ga0395900_0000851 3300037418 Bacteria 40239
68 Ga0395900_0029361 3300037418 Bacteria 5642
69 Ga0395900_0075892 3300037418 Bacteria 3455
70 Ga0395898_0002686 3300037466 Bacteria 20580
71 Ga0395905_0011465 3300037471 Bacteria 8566
72 Ga0395905_0078866 3300037471 Bacteria 3086
73 Ga0395905_0084394 3300037471 Bacteria 2976
74 Ga0395901_0043241 3300038443 Bacteria 4674
75 Ga0395901_0411988 3300038443 Bacteria 1387
76 Ga0436365_0833878 3300039437 Bacteria 37717
77 Ga0436365_1420072 3300039437 Bacteria 2649
78 Ga0436365_1459316 3300039437 Bacteria 3619
79 Ga0436365_1585518 3300039437 Bacteria 2976
80 Ga0436361_0340128 3300039447 Bacteria 3736
81 Ga0436363_0983416 3300039450 Bacteria 14608
82 Ga0436363_1087787 3300039450 Bacteria 1916
83 Ga0450904_000071 3300042139 Bacteria 22967
84 Ga0466969_0015338 3300044656 Bacteria 4016
85 Ga0466966_0003903 3300044684 Bacteria 9843
86 Ga0466966_0011098 3300044684 Bacteria 5981
87 Ga0466966_0183719 3300044684 Bacteria 1268
88 Ga0466961_0018044 3300044693 Bacteria 4537
89 Ga0466963_0154656 3300044694 Bacteria 1594
90 Ga0466959_0061036 3300045049 Bacteria 2742
91 Ga0466958_0027452 3300045836 Bacteria 3369
92 Ga0466967_0052552 3300045976 Bacteria 3577
93 Ga0466967_0077480 3300045976 Bacteria 2993
94 Ga0495617_000002 3300046452 Bacteria 710121
95 Ga0495627_000176 3300046453 Bacteria 72651
96 Ga0495592_0001168 3300046454 Bacteria 18228
97 Ga0495603_0000777 3300046455 Bacteria 18238
98 Ga0495590_0017137 3300046457 Bacteria 2610
99 Ga0495591_001324 3300046458 Bacteria 15577
100 Ga0495629_0000601 3300046459 Bacteria 29283
101 Ga0495629_0005851 3300046459 Bacteria 9173
102 Ga0495638_0002124 3300046460 Bacteria 16695
103 Ga0495651_0017008 3300046462 Bacteria 5633
104 Ga0495653_0053986 3300046463 Bacteria 3072
105 Ga0495650_0043730 3300046471 Bacteria 1898
106 Ga0495580_0010200 3300046472 Bacteria 7333
107 Ga0495582_0000756 3300046473 Bacteria 17834
108 Ga0495605_0000081 3300046474 Bacteria 125302
109 Ga0495605_0005470 3300046474 Bacteria 7400
110 Ga0495605_0016956 3300046474 Bacteria 3934
111 Ga0495605_0017562 3300046474 Bacteria 3848
112 Ga0495605_0017765 3300046474 Bacteria 3824
113 Ga0495605_0029649 3300046474 Bacteria 2812
114 Ga0495639_0012610 3300046475 Bacteria 3647
115 Ga0495662_0000177 3300046476 Bacteria 25523
116 Ga0495664_0002251 3300046477 Bacteria 10338
117 Ga0495584_0003195 3300046491 Bacteria 9113
118 Ga0495584_0004806 3300046491 Bacteria 7219
119 Ga0495584_0004906 3300046491 Bacteria 7141
120 Ga0495584_0036678 3300046491 Bacteria 2476
121 Ga0495585_0004152 3300046492 Bacteria 9473
122 Ga0495585_0007077 3300046492 Bacteria 6897
123 Ga0495594_0001964 3300046499 Bacteria 10730
124 Ga0495594_0002412 3300046499 Bacteria 9730
125 Ga0495596_0004152 3300046500 Bacteria 7118
126 Ga0495596_0005278 3300046500 Bacteria 6131
127 Ga0495596_0016490 3300046500 Bacteria 3068
128 Ga0495596_0016888 3300046500 Bacteria 3028
129 Ga0495607_0000884 3300046501 Bacteria 27939
130 Ga0495607_0004171 3300046501 Bacteria 10738
131 Ga0495607_0046362 3300046501 Bacteria 2553
132 Ga0495583_0000241 3300046506 Bacteria 90735
133 Ga0495583_0013062 3300046506 Bacteria 4658
134 Ga0495606_0003103 3300046507 Bacteria 18073
135 Ga0495606_0011412 3300046507 Bacteria 7247
136 Ga0495606_0012140 3300046507 Bacteria 6945
137 Ga0495606_0111404 3300046507 Bacteria 1650
138 Ga0495610_0007454 3300046512 Bacteria 7278
139 Ga0495616_0017347 3300046513 Bacteria 3971
140 Ga0495616_0022526 3300046513 Bacteria 3402
141 Ga0495616_0036104 3300046513 Bacteria 2552
142 Ga0495616_0052840 3300046513 Bacteria 2021
143 Ga0495618_0003929 3300046514 Bacteria 9173
144 Ga0495628_0046857 3300046516 Bacteria 3432
145 Ga0495628_0187325 3300046516 Bacteria 1563
146 Ga0495630_0002970 3300046517 Bacteria 11772
147 Ga0495631_0001324 3300046518 Bacteria 15177
148 Ga0495631_0005020 3300046518 Bacteria 6969
149 Ga0495632_0000040 3300046519 Bacteria 149644
150 Ga0495632_0005071 3300046519 Bacteria 8809
151 Ga0495637_0047076 3300046520 Bacteria 1822
152 Ga0495643_0006304 3300046522 Bacteria 7845
153 Ga0495644_0004347 3300046523 Bacteria 5568
154 Ga0495648_0004826 3300046524 Bacteria 11379
155 Ga0495648_0004921 3300046524 Bacteria 11237
156 Ga0495648_0014375 3300046524 Bacteria 5798
157 Ga0495648_0014733 3300046524 Bacteria 5702
158 Ga0495648_0049385 3300046524 Bacteria 2579
159 Ga0495666_0005194 3300046526 Bacteria 6574
160 Ga0495642_0000057 3300046528 Bacteria 66980
161 Ga0495642_0008367 3300046528 Bacteria 3960
162 Ga0495642_0012417 3300046528 Bacteria 3284
163 Ga0495642_0019608 3300046528 Bacteria 2652
164 Ga0495642_0021598 3300046528 Bacteria 2532
165 Ga0495642_0044526 3300046528 Bacteria 1812
166 Ga0495652_0006853 3300046529 Bacteria 10550
167 Ga0495652_0033991 3300046529 Bacteria 4446
168 Ga0495654_0066851 3300046530 Bacteria 1712
169 Ga0495665_0001551 3300046531 Bacteria 12262
170 Ga0495665_0012040 3300046531 Bacteria 4683
171 Ga0495640_0000739 3300046533 Bacteria 24425
172 Ga0495640_0013390 3300046533 Bacteria 6231
173 Ga0495609_0000019 3300046538 Bacteria 297777
174 Ga0495609_0003010 3300046538 Bacteria 9938
175 Ga0495597_0000622 3300046542 Bacteria 28970
176 Ga0495633_0034280 3300046558 Bacteria 2442
177 Ga0495667_0070737 3300046559 Bacteria 2276
178 Ga0495656_0058102 3300046615 Bacteria 1677
179 Ga0495668_0000435 3300046616 Bacteria 53680
180 Ga0495668_0007986 3300046616 Bacteria 6669
181 Ga0495668_0015084 3300046616 Bacteria 4520
182 Ga0495668_0038414 3300046616 Bacteria 2674
183 Ga0495668_0061691 3300046616 Bacteria 2067
184 Ga0495634_0001062 3300046642 Bacteria 25776
185 Ga0495634_0024327 3300046642 Bacteria 4249
186 Ga0495611_0002454 3300046648 Bacteria 8465
187 Ga0495611_0016006 3300046648 Bacteria 3206
188 Ga0495625_0036179 3300046660 Bacteria 3631
189 Ga0495635_0016484 3300046663 Bacteria 5161
190 Ga0495661_0000335 3300046665 Bacteria 51184
191 Ga0495661_0001251 3300046665 Bacteria 21937
192 Ga0495661_0002204 3300046665 Bacteria 15188
193 Ga0495661_0009359 3300046665 Bacteria 6725
194 Ga0495661_0012166 3300046665 Bacteria 5811
195 Ga0495661_0014857 3300046665 Bacteria 5207
196 Ga0495661_0028259 3300046665 Bacteria 3593
197 Ga0495661_0046218 3300046665 Bacteria 2659
198 Ga0495588_0000050 3300046674 Bacteria 335314
199 Ga0495588_0002752 3300046674 Bacteria 7547
200 Ga0495599_0038766 3300046678 Bacteria 2994
201 Ga0495623_0007737 3300046679 Bacteria 6985
202 Ga0495646_0009184 3300046680 Bacteria 6274
203 Ga0495646_0025562 3300046680 Bacteria 3714
204 Ga0495647_0001165 3300046681 Bacteria 8086
205 Ga0495658_0001008 3300046683 Bacteria 14877
206 Ga0495669_0000359 3300046684 Bacteria 23229
207 Ga0495669_0002238 3300046684 Bacteria 7936
208 Ga0495669_0002392 3300046684 Bacteria 7701
209 Ga0495669_0067028 3300046684 Bacteria 1631
210 Ga0495613_0005780 3300046689 Bacteria 9261
211 Ga0495624_0000680 3300046690 Bacteria 26668
212 Ga0495624_0037863 3300046690 Bacteria 3101
213 Ga0495670_0023973 3300046691 Bacteria 3013
214 Ga0495670_0061510 3300046691 Bacteria 1888
215 Ga0495671_0000132 3300046692 Bacteria 67269
216 Ga0495649_0000427 3300046694 Bacteria 36486
217 Ga0495589_0000107 3300046794 Bacteria 80327
218 Ga0495589_0003300 3300046794 Bacteria 8756
219 Ga0495589_0004185 3300046794 Bacteria 7721
220 Ga0495589_0004446 3300046794 Bacteria 7455
221 Ga0495600_0006354 3300046809 Bacteria 7189
222 Ga0495660_0046446 3300046810 Bacteria 2381
223 Ga0495581_0000236 3300047315 Bacteria 26189
224 Ga0495604_0025094 3300047317 Bacteria 4751
225 Ga0495636_0036022 3300047318 Bacteria 2040
226 Ga0495680_0018049 3300047322 Bacteria 6003
227 Ga0495683_0005690 3300047323 Bacteria 6885
228 Ga0495683_0018663 3300047323 Bacteria 3583
229 Ga0495687_000003 3300047443 Bacteria 859509
230 Ga0495687_000028 3300047443 Bacteria 293356
231 Ga0495675_0066613 3300047444 Bacteria 2276
232 Ga0495677_0000021 3300047445 Bacteria 103770
233 Ga0495677_0004603 3300047445 Bacteria 5266
234 Ga0495677_0005666 3300047445 Bacteria 4732
235 Ga0495679_001409 3300047446 Bacteria 13712
236 Ga0495679_006157 3300047446 Bacteria 5220
237 Ga0495679_022809 3300047446 Bacteria 2135
238 Ga0495679_034599 3300047446 Bacteria 1606
239 Ga0495685_015381 3300047447 Bacteria 2608
240 Ga0495681_0001268 3300047470 Bacteria 19172
241 Ga0495684_0010549 3300047471 Bacteria 7141
242 Ga0495684_0053723 3300047471 Bacteria 3074
243 Ga0495593_0001094 3300047673 Bacteria 15828
244 Ga0495626_0000664 3300048091 Bacteria 33110
245 Ga0495626_0009747 3300048091 Bacteria 5176
246 Ga0495626_0011090 3300048091 Bacteria 4778
247 Ga0495626_0048090 3300048091 Bacteria 1980
248 Ga0496100_0000072 3300048903 Bacteria 55542
249 Ga0496101_0000064 3300048904 Bacteria 124993
250 Ga0496102_0000296 3300048905 Bacteria 63971
251 Ga0496102_0150322 3300048905 Bacteria 2188
252 Ga0496103_0000153 3300048906 Bacteria 72323
253 Ga0496104_0161720 3300048907 Bacteria 2147
254 Ga0496105_0122792 3300048908 Bacteria 2141
255 Ga0496106_0027170 3300048909 Bacteria 4262
256 Ga0496106_0181197 3300048909 Bacteria 1672
257 Ga0496107_0107217 3300048910 Bacteria 2052
258 Ga0496110_0000137 3300048913 Bacteria 42167
259 Ga0496110_0004400 3300048913 Bacteria 10911
260 Ga0496111_0009944 3300048914 Bacteria 6361
261 Ga0496115_0096493 3300048918 Bacteria 2421
262 Ga0496115_0168445 3300048918 Bacteria 1811
263 Ga0496117_0000134 3300048920 Bacteria 161270
264 Ga0496118_0000139 3300048921 Bacteria 128723
265 Ga0496121_0000202 3300048924 Bacteria 131089
266 Ga0495678_000467 3300049459 Bacteria 40162
267 Ga0495678_018723 3300049459 Bacteria 3107
268 Ga0495682_0011252 3300049460 Bacteria 3444
269 Ga0495682_0014239 3300049460 Bacteria 3017
270 Ga0501047_0163834 3300049581 Unclassified 2095
271 nmdc:mga09592_27488_c1 3300050508 Bacteria 4720
272 nmdc:mga08y16_29663_c1 3300050511 Bacteria 5761
273 Ga0495619_0019912 3300053085 Bacteria 4270
274 Ga0500647_0011284 3300053091 Bacteria 3983
275 Ga0500647_0025127 3300053091 Bacteria 2806
276 Ga0500566_0000002 3300053094 Bacteria 221889
277 Ga0500640_004362 3300053095 Bacteria 5127
278 Ga0500557_000003 3300053105 Bacteria 228429
279 Ga0500572_000120 3300053111 Bacteria 26188
280 Ga0500572_000728 3300053111 Bacteria 10645
281 Ga0500608_056065 3300053122 Bacteria 1888
282 Ga0500614_000907 3300053123 Bacteria 7461
283 Ga0500618_004438 3300053125 Bacteria 4493
284 Ga0500642_0000051 3300053130 Bacteria 77123
285 Ga0500559_0000601 3300053136 Bacteria 24522
286 Ga0500559_0016113 3300053136 Bacteria 3156
287 Ga0500590_059297 3300053148 Bacteria 1926
288 Ga0500603_001722 3300053150 Bacteria 4924
289 Ga0500630_000612 3300053159 Bacteria 16218
290 Ga0500639_000002 3300053163 Bacteria 233548
291 Ga0500625_004604 3300053729 Bacteria 5662
292 Ga0500645_004226 3300053730 Bacteria 5581
293 Ga0500596_001280 3300053735 Bacteria 5080
294 Ga0587082_000267 3300059504 Bacteria 3842
295 2509148300 2508501128 Bacteria 8613869
296 2513892599 2513237141 Bacteria 8496279
297 2723849450 2721755755 Bacteria 8322773
298 2728752589 2728368998 Bacteria 8720350
299 2842779455 2842775625 Bacteria 5587290
300 2855733288 2855730933 Bacteria 7047938
301 2855772495 2855767633 Bacteria 7049357
302 2874608300 2874604998 Bacteria 7834745
303 2881416096 2881412998 Bacteria 6492157
304 2904547050 2904541872 Bacteria 8915136
305 2922364227 2922361189 Bacteria 7436256
306 2924786056 2924784321 Bacteria 7416538
307 2929164599 2929160207 Bacteria 9075316
308 8006928688 8006926726 Bacteria 6749210
309 8007000074 8006994254 Bacteria 8309700
310 8055227288 8055225921 Bacteria 3341787
311 8056688018 8056681323 Bacteria 8472857
312 Ga0495583_0013254
313 JGI25151J46595_10000131
314 JGI25406J46586_10000138
315 JGI25406J46586_10012291
316 Ga0065165_1016462
317 Ga0070683_100008627
318 Ga0070680_100150424
319 Ga0070667_100199089
320 Ga0070711_100173896
321 Ga0070711_100190502
322 Ga0070681_10077159
323 Ga0070706_100001219
324 Ga0070698_100109060
325 Ga0070679_100092108
326 Ga0070684_100014090
327 Ga0070684_100016083
328 Ga0070672_100115072
329 Ga0068855_100073040
330 Ga0068852_100011370
331 Ga0068851_10001994
332 Ga0081455_10002308
333 Ga0081539_10000008
334 Ga0081539_10000676
335 Ga0070716_100074191
336 Ga0070712_100018240
337 Ga0075367_10030650
338 Ga0075366_10080850
339 Ga0075428_100000852
340 Ga0075429_100106323
341 Ga0099794_10016290
342 Ga0105240_10011282
343 Ga0105240_10044259
344 Ga0111539_10041647
345 Ga0105248_10080211
346 Ga0105237_10032333
347 Ga0105238_10006047
348 Ga0171463_1002
349 Ga0157374_10039043
350 Ga0157379_10119426
351 Ga0183363_1256
352 Ga0209025_1000028
353 Ga0209025_1000133
354 Ga0207684_10104193
355 Ga0207693_10040376
356 Ga0207693_10049082
357 Ga0207663_10096008
358 Ga0207657_10032188
359 Ga0207657_10131949
360 Ga0207652_10052915
361 Ga0207652_10086757
362 Ga0207665_10031628
363 Ga0207711_10127028
364 Ga0207661_10012799
365 Ga0207667_10025604
366 Ga0209588_1009897
367 Ga0307515_10051817
368 Ga0307515_10080931
369 Ga0265330_10020242
370 Ga0307513_10000037
371 Ga0373936_0003384
372 Ga0373936_0048073
373 Ga0373953_0011726
374 Ga0373955_0025594
375 Ga0373935_0001072
376 Ga0395899_0016188
377 Ga0395899_0018559
378 Ga0395900_0000851
379 Ga0395900_0029361
380 Ga0395900_0075892
381 Ga0395898_0002686
382 Ga0395905_0011465
383 Ga0395905_0078866
384 Ga0395905_0084394
385 Ga0395901_0043241
386 Ga0395901_0411988
387 Ga0436365_0833878
388 Ga0436365_1420072
389 Ga0436365_1459316
390 Ga0436365_1585518
391 Ga0436361_0340128
392 Ga0436363_0983416
393 Ga0436363_1087787
394 Ga0450904_000071
395 Ga0466969_0015338
396 Ga0466966_0003903
397 Ga0466966_0011098
398 Ga0466966_0183719
399 Ga0466961_0018044
400 Ga0466963_0154656
401 Ga0466959_0061036
402 Ga0466958_0027452
403 Ga0466967_0052552
404 Ga0466967_0077480
405 Ga0495617_000002
406 Ga0495627_000176
407 Ga0495592_0001168
408 Ga0495603_0000777
409 Ga0495590_0017137
410 Ga0495591_001324
411 Ga0495629_0000601
412 Ga0495629_0005851
413 Ga0495638_0002124
414 Ga0495651_0017008
415 Ga0495653_0053986
416 Ga0495650_0043730
417 Ga0495580_0010200
418 Ga0495582_0000756
419 Ga0495605_0000081
420 Ga0495605_0005470
421 Ga0495605_0016956
422 Ga0495605_0017562
423 Ga0495605_0017765
424 Ga0495605_0029649
425 Ga0495639_0012610
426 Ga0495662_0000177
427 Ga0495664_0002251
428 Ga0495584_0003195
429 Ga0495584_0004806
430 Ga0495584_0004906
431 Ga0495584_0036678
432 Ga0495585_0004152
433 Ga0495585_0007077
434 Ga0495594_0001964
435 Ga0495594_0002412
436 Ga0495596_0004152
437 Ga0495596_0005278
438 Ga0495596_0016490
439 Ga0495596_0016888
440 Ga0495607_0000884
441 Ga0495607_0004171
442 Ga0495607_0046362
443 Ga0495583_0000241
444 Ga0495583_0013062
445 Ga0495606_0003103
446 Ga0495606_0011412
447 Ga0495606_0012140
448 Ga0495606_0111404
449 Ga0495610_0007454
450 Ga0495616_0017347
451 Ga0495616_0022526
452 Ga0495616_0036104
453 Ga0495616_0052840
454 Ga0495618_0003929
455 Ga0495628_0046857
456 Ga0495628_0187325
457 Ga0495630_0002970
458 Ga0495631_0001324
459 Ga0495631_0005020
460 Ga0495632_0000040
461 Ga0495632_0005071
462 Ga0495637_0047076
463 Ga0495643_0006304
464 Ga0495644_0004347
465 Ga0495648_0004826
466 Ga0495648_0004921
467 Ga0495648_0014375
468 Ga0495648_0014733
469 Ga0495648_0049385
470 Ga0495666_0005194
471 Ga0495642_0000057
472 Ga0495642_0008367
473 Ga0495642_0012417
474 Ga0495642_0019608
475 Ga0495642_0021598
476 Ga0495642_0044526
477 Ga0495652_0006853
478 Ga0495652_0033991
479 Ga0495654_0066851
480 Ga0495665_0001551
481 Ga0495665_0012040
482 Ga0495640_0000739
483 Ga0495640_0013390
484 Ga0495609_0000019
485 Ga0495609_0003010
486 Ga0495597_0000622
487 Ga0495633_0034280
488 Ga0495667_0070737
489 Ga0495656_0058102
490 Ga0495668_0000435
491 Ga0495668_0007986
492 Ga0495668_0015084
493 Ga0495668_0038414
494 Ga0495668_0061691
495 Ga0495634_0001062
496 Ga0495634_0024327
497 Ga0495611_0002454
498 Ga0495611_0016006
499 Ga0495625_0036179
500 Ga0495635_0016484
501 Ga0495661_0000335
502 Ga0495661_0001251
503 Ga0495661_0002204
504 Ga0495661_0009359
505 Ga0495661_0012166
506 Ga0495661_0014857
507 Ga0495661_0028259
508 Ga0495661_0046218
509 Ga0495588_0000050
510 Ga0495588_0002752
511 Ga0495599_0038766
512 Ga0495623_0007737
513 Ga0495646_0009184
514 Ga0495646_0025562
515 Ga0495647_0001165
516 Ga0495658_0001008
517 Ga0495669_0000359
518 Ga0495669_0002238
519 Ga0495669_0002392
520 Ga0495669_0067028
521 Ga0495613_0005780
522 Ga0495624_0000680
523 Ga0495624_0037863
524 Ga0495670_0023973
525 Ga0495670_0061510
526 Ga0495671_0000132
527 Ga0495649_0000427
528 Ga0495589_0000107
529 Ga0495589_0003300
530 Ga0495589_0004185
531 Ga0495589_0004446
532 Ga0495600_0006354
533 Ga0495660_0046446
534 Ga0495581_0000236
535 Ga0495604_0025094
536 Ga0495636_0036022
537 Ga0495680_0018049
538 Ga0495683_0005690
539 Ga0495683_0018663
540 Ga0495687_000003
541 Ga0495687_000028
542 Ga0495675_0066613
543 Ga0495677_0000021
544 Ga0495677_0004603
545 Ga0495677_0005666
546 Ga0495679_001409
547 Ga0495679_006157
548 Ga0495679_022809
549 Ga0495679_034599
550 Ga0495685_015381
551 Ga0495681_0001268
552 Ga0495684_0010549
553 Ga0495684_0053723
554 Ga0495593_0001094
555 Ga0495626_0000664
556 Ga0495626_0009747
557 Ga0495626_0011090
558 Ga0495626_0048090
559 Ga0496100_0000072
560 Ga0496101_0000064
561 Ga0496102_0000296
562 Ga0496102_0150322
563 Ga0496103_0000153
564 Ga0496104_0161720
565 Ga0496105_0122792
566 Ga0496106_0027170
567 Ga0496106_0181197
568 Ga0496107_0107217
569 Ga0496110_0000137
570 Ga0496110_0004400
571 Ga0496111_0009944
572 Ga0496115_0096493
573 Ga0496115_0168445
574 Ga0496117_0000134
575 Ga0496118_0000139
576 Ga0496121_0000202
577 Ga0495678_000467
578 Ga0495678_018723
579 Ga0495682_0011252
580 Ga0495682_0014239
581 Ga0501047_0163834
582 nmdc:mga09592_27488_c1
583 nmdc:mga08y16_29663_c1
584 Ga0495619_0019912
585 Ga0500647_0011284
586 Ga0500647_0025127
587 Ga0500566_0000002
588 Ga0500640_004362
589 Ga0500557_000003
590 Ga0500572_000120
591 Ga0500572_000728
592 Ga0500608_056065
593 Ga0500614_000907
594 Ga0500618_004438
595 Ga0500642_0000051
596 Ga0500559_0000601
597 Ga0500559_0016113
598 Ga0500590_059297
599 Ga0500603_001722
600 Ga0500630_000612
601 Ga0500639_000002
602 Ga0500625_004604
603 Ga0500645_004226
604 Ga0500596_001280
605 Ga0587082_000267
606 2509148300
607 2513892599
608 2723849450
609 2728752589
610 2842779455
611 2855733288
612 2855772495
613 2874608300
614 2881416096
615 2904547050
616 2922364227
617 2924786056
618 2929164599
619 8006928688
620 8007000074
621 8055227288
622 8056688018

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00202

Aminotran_3

Aminotransferase class-III

31

461

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3i4j-assembly2.cif.gz_D crystal structure of aminotransferase, class iii from deinococcus radiodurans 0.9483 3 438
4a72-assembly2.cif.gz_C crystal structure of the omega transaminase from chromobacterium violaceum in a mixture of apo and plp-bound states 0.9471 13 444
6io1-assembly1.cif.gz_A crystal structure of a novel thermostable (s)-enantioselective omega-transaminase from thermomicrobium roseum 0.9449 2 438
3i4j-assembly2.cif.gz_D crystal structure of aminotransferase, class iii from deinococcus radiodurans 0.9435 3 438
5kr5-assembly1.cif.gz_B directed evolution of transaminases by ancestral reconstruction. using old proteins for new chemistries 0.9405 3 439
ID Description Score Start End Superfamily
af_O94562_342_458_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.992 328 441 3.90.1150.10
af_Q59ZF3_365_473_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9858 327 432 3.90.1150.10
af_O94562_65_341_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9825 51 324 3.40.640.10
af_O94562_65_341_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9685 51 324 3.40.640.10
af_Q59ZF3_61_357_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9661 51 317 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A455U3S2-F1-model_v4 Aminotransferase class III-fold pyridoxal phosphate-dependent enzyme 0.9904 353 440 GO:0005829
AF-A0A4R7LR87-F1-model_v4 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.988 1 438 GO:0005829
GO:0008483
GO:0030170
AF-X5Z5Z0-F1-model_v4 Aminotransferase 0.9871 56 439 GO:0005829
GO:0008483
GO:0030170
AF-A0A358HR77-F1-model_v4 Aspartate aminotransferase family protein 0.9867 107 272 GO:0005829
GO:0008483
GO:0030170
AF-A0A5N6T8J7-F1-model_v4 Pyridoxal phosphate-dependent transferase 0.9866 1 442 GO:0005829
GO:0008483
GO:0030170

Map