F401409

General Info

Members Datasets Scaffolds Average Seq Length
311 199 622 467

Family's Representative Sequence

Representative Sequence 3300048923|Ga0496120_0035716|Ga0496120_0035716_399_1847
Length 482
Sequence LRRPAEQALEFDPLSRLIVISNRVSAPNGSNSGAQGGLAVALAAALRENGGIWFGWSGEQTDQFTGQISMQRSQGVTTATVDLEEQDIEEYYNGYANRTLWPLFHYRIDLAEYERGFAGGYQRVNERFAETVRPLIEPDDVIWVQDYHMFPLGQELRRRGCRNRIGFFLHIPWPPRRLLSSLPKAHELIETLFAYDVIGFHTQEWMESFIDFARAEMEAVVQPDGVLRIGLKSVKLVACPIGIDAKEFEALAESDAARDTFAQMRTSAVGRSMIVGVDRLDYSKGLEERFLGYERFLTTYPEQRKEVFLLQIAPPSRATVETYQRIRSTLEGLSGKINGAHADLDWVPLRYVNQGYPRDVLAGVYRAARIGLVTPLRDGMNLVAKEYVAAQDPADPGVLILSKFAGAAIQMQEALLVNPYSAEEVSDAICQALNMPLEERIERWQVLKKGVDEQDVTWWLKKFTAELTSVPMETETRLPVEA

Samples

Sample ID Description Type Environment
1 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
4 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
5 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
6 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
7 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
8 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
9 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
10 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
11 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
12 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
16 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
17 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
92 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
93 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
94 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
95 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
99 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
100 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
101 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
102 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
103 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
104 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
105 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
106 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
107 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
108 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
109 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
110 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
111 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
112 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
113 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
114 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
115 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
116 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
117 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
118 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
119 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
120 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
121 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
122 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
123 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
124 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
125 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
126 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
127 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
128 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
129 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
130 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
131 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
132 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
133 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
134 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
135 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
138 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
139 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
140 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
141 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
142 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
143 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
144 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
145 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
146 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
147 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
148 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
149 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
154 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
155 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
156 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
157 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
158 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
159 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
160 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
161 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
162 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
163 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
164 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
165 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
166 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
169 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
170 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
171 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
172 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
173 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
174 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
175 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
176 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
177 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
178 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
179 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
180 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
181 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
182 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
183 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
184 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
185 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
186 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
187 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
188 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
189 2775507255 Sphingobium indicum B90A Isolate Rhizosphere
190 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
191 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
192 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
193 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
194 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
195 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
196 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
197 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
198 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
199 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.53
Metatranscriptomes 0
Isolates 5.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.22
Nodule 0
Rhizoplane 3.54
Rhizosphere 70.42
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496120_0035716 3300048923 Bacteria 2965
2 SwRhRL2b_contig_1006216 2162886007 Bacteria 4643
3 JGI24736J21556_1000285 3300001904 Bacteria 9232
4 JGI24736J21556_1003513 3300001904 Bacteria 2717
5 JGI24741J21665_1000044 3300001915 Bacteria 30118
6 JGI24740J21852_10000438 3300001979 Bacteria 17777
7 JGI24739J22299_10004666 3300001989 Bacteria 5236
8 JGI24737J22298_10001487 3300001990 Bacteria 8355
9 JGI24737J22298_10006823 3300001990 Bacteria 3880
10 JGI24735J21928_10001621 3300002067 Bacteria 7958
11 JGI24735J21928_10003314 3300002067 Bacteria 5494
12 JGI24738J21930_10001237 3300002075 Bacteria 7184
13 Ga0055542_1007267 3300003762 Bacteria 2268
14 Ga0055524_1000095 3300003775 Bacteria 109223
15 Ga0055530_10000044 3300003791 Bacteria 110073
16 Ga0055531_10000072 3300003794 Bacteria 110069
17 Ga0055531_10000338 3300003794 Bacteria 46156
18 Ga0055531_10003147 3300003794 Bacteria 10631
19 Ga0065165_1002973 3300005262 Bacteria 12869
20 Ga0065704_10001606 3300005289 Bacteria 13416
21 Ga0065704_10070888 3300005289 Bacteria 15002
22 Ga0065704_10077467 3300005289 Bacteria 4727
23 Ga0065704_10103796 3300005289 Bacteria 2161
24 Ga0065707_10104109 3300005295 Bacteria 2712
25 Ga0070660_100000017 3300005339 Bacteria 102283
26 Ga0070661_100013209 3300005344 Bacteria 5797
27 Ga0070668_100001881 3300005347 Bacteria 15343
28 Ga0070668_100004448 3300005347 Bacteria 10401
29 Ga0070668_100005215 3300005347 Bacteria 9639
30 Ga0070669_100000061 3300005353 Bacteria 107718
31 Ga0070669_100026630 3300005353 Bacteria 4161
32 Ga0070669_100094808 3300005353 Bacteria 2243
33 Ga0070669_100106687 3300005353 Bacteria 2121
34 Ga0070671_100001588 3300005355 Bacteria 17088
35 Ga0070674_100023945 3300005356 Bacteria 3959
36 Ga0070667_100000014 3300005367 Bacteria 241949
37 Ga0070667_100000276 3300005367 Bacteria 58397
38 Ga0070667_100008649 3300005367 Bacteria 8437
39 Ga0070667_100112460 3300005367 Bacteria 2362
40 Ga0070663_100000560 3300005455 Bacteria 19793
41 Ga0070662_100002285 3300005457 Bacteria 11762
42 Ga0070662_100019179 3300005457 Bacteria 4641
43 Ga0068853_100004367 3300005539 Bacteria 10943
44 Ga0068853_100185321 3300005539 Bacteria 1889
45 Ga0070665_100000871 3300005548 Bacteria 38979
46 Ga0070665_100013875 3300005548 Bacteria 8105
47 Ga0068855_100260209 3300005563 Bacteria 1933
48 Ga0068856_100016880 3300005614 Bacteria 7076
49 Ga0068852_100010238 3300005616 Bacteria 6992
50 Ga0068859_100083174 3300005617 Bacteria 3243
51 Ga0068864_100002224 3300005618 Bacteria 16035
52 Ga0068864_100156613 3300005618 Bacteria 2068
53 Ga0068863_100000006 3300005841 Bacteria 265379
54 Ga0068863_100000114 3300005841 Bacteria 85668
55 Ga0068863_100017005 3300005841 Bacteria 6975
56 Ga0068860_100000386 3300005843 Bacteria 57855
57 Ga0068860_100006289 3300005843 Bacteria 11929
58 Ga0068860_100015167 3300005843 Bacteria 7527
59 Ga0068862_100000251 3300005844 Bacteria 59933
60 Ga0068862_100008165 3300005844 Bacteria 8655
61 Ga0068862_100041276 3300005844 Bacteria 3925
62 Ga0075368_10000269 3300006042 Bacteria 14941
63 Ga0075367_10000067 3300006178 Bacteria 26232
64 Ga0075366_10068794 3300006195 Bacteria 2107
65 Ga0075370_10036814 3300006353 Bacteria 2750
66 Ga0097620_100083177 3300006931 Bacteria 3243
67 Ga0105247_10046418 3300009101 Bacteria 2666
68 Ga0105243_10085230 3300009148 Bacteria 2589
69 Ga0105241_10002180 3300009174 Bacteria 14753
70 Ga0105248_10008158 3300009177 Bacteria 11503
71 Ga0105248_10062295 3300009177 Bacteria 4189
72 Ga0105248_10118567 3300009177 Bacteria 2985
73 Ga0105238_10027745 3300009551 Bacteria 5771
74 Ga0105238_10063975 3300009551 Bacteria 3679
75 Ga0105249_10000086 3300009553 Bacteria 132132
76 Ga0105249_10055302 3300009553 Bacteria 3630
77 Ga0105148_100036 3300009978 Bacteria 19680
78 Ga0105239_10000694 3300010375 Bacteria 47928
79 Ga0157373_10095058 3300013100 Bacteria 2098
80 Ga0157369_10055934 3300013105 Bacteria 4258
81 Ga0157380_10150882 3300014326 Bacteria 2009
82 Ga0183363_1005 3300015690 Bacteria 403020
83 Ga0163161_10085187 3300017792 Bacteria 2331
84 Ga0209147_101506 3300025229 Bacteria 8227
85 Ga0209148_1000160 3300025254 Bacteria 139522
86 Ga0209565_1000008 3300025263 Bacteria 774179
87 Ga0209673_1004523 3300025273 Bacteria 7403
88 Ga0209675_1012982 3300025291 Bacteria 2641
89 Ga0209050_1000014 3300025298 Bacteria 774327
90 Ga0209050_1006288 3300025298 Bacteria 7101
91 Ga0209256_1000009 3300025299 Bacteria 922071
92 Ga0209256_1000010 3300025299 Bacteria 912110
93 Ga0209257_1000019 3300025304 Bacteria 774261
94 Ga0209257_1003192 3300025304 Bacteria 14543
95 Ga0207696_1008366 3300025711 Bacteria 3968
96 Ga0207710_10001111 3300025900 Bacteria 13753
97 Ga0207680_10002893 3300025903 Bacteria 8048
98 Ga0207647_10001567 3300025904 Bacteria 17562
99 Ga0207647_10002697 3300025904 Bacteria 13405
100 Ga0207647_10013358 3300025904 Bacteria 5699
101 Ga0207647_10025399 3300025904 Bacteria 3893
102 Ga0207695_10002114 3300025913 Bacteria 30152
103 Ga0207657_10000455 3300025919 Bacteria 43503
104 Ga0207657_10002424 3300025919 Bacteria 20139
105 Ga0207681_10000019 3300025923 Bacteria 243902
106 Ga0207681_10020955 3300025923 Bacteria 4149
107 Ga0207681_10076754 3300025923 Bacteria 2347
108 Ga0207694_10017456 3300025924 Bacteria 5424
109 Ga0207694_10027457 3300025924 Bacteria 4335
110 Ga0207650_10031448 3300025925 Bacteria 3833
111 Ga0207644_10003349 3300025931 Bacteria 10339
112 Ga0207706_10022332 3300025933 Bacteria 5678
113 Ga0207669_10120027 3300025937 Bacteria 1782
114 Ga0207704_10098383 3300025938 Bacteria 1943
115 Ga0207711_10060130 3300025941 Bacteria 3273
116 Ga0207711_10311471 3300025941 Bacteria 1453
117 Ga0207667_10182906 3300025949 Bacteria 2152
118 Ga0207712_10000026 3300025961 Bacteria 271237
119 Ga0207712_10032213 3300025961 Bacteria 3537
120 Ga0207668_10000531 3300025972 Bacteria 23835
121 Ga0207668_10002452 3300025972 Bacteria 10828
122 Ga0207668_10021016 3300025972 Bacteria 4157
123 Ga0207668_10035189 3300025972 Bacteria 3332
124 Ga0207640_10004391 3300025981 Bacteria 7644
125 Ga0207658_10000017 3300025986 Bacteria 214015
126 Ga0207658_10000262 3300025986 Bacteria 55229
127 Ga0207658_10001459 3300025986 Bacteria 18451
128 Ga0207639_10003276 3300026041 Bacteria 10902
129 Ga0207639_10006542 3300026041 Bacteria 7925
130 Ga0207639_10041939 3300026041 Bacteria 3428
131 Ga0207678_10002436 3300026067 Bacteria 16913
132 Ga0207702_10018339 3300026078 Bacteria 5789
133 Ga0207641_10000054 3300026088 Bacteria 170887
134 Ga0207641_10000092 3300026088 Bacteria 127475
135 Ga0207641_10005570 3300026088 Bacteria 10731
136 Ga0207676_10124845 3300026095 Bacteria 2178
137 Ga0207674_10002653 3300026116 Bacteria 22338
138 Ga0207674_10024706 3300026116 Bacteria 6414
139 Ga0207674_10042976 3300026116 Bacteria 4662
140 Ga0209813_10000041 3300027866 Bacteria 53753
141 Ga0268266_10000675 3300028379 Bacteria 46130
142 Ga0268266_10007919 3300028379 Bacteria 9508
143 Ga0268265_10000256 3300028380 Bacteria 60525
144 Ga0268265_10008757 3300028380 Bacteria 6836
145 Ga0268264_10000040 3300028381 Bacteria 373714
146 Ga0268264_10001540 3300028381 Bacteria 21450
147 Ga0268264_10004598 3300028381 Bacteria 11728
148 Ga0268264_10057066 3300028381 Bacteria 3265
149 Ga0307513_10016928 3300031456 Bacteria 8764
150 Ga0307405_10176276 3300031731 Bacteria 1530
151 Ga0307412_10001228 3300031911 Bacteria 14549
152 Ga0307412_10006619 3300031911 Bacteria 6565
153 Ga0307412_10018844 3300031911 Bacteria 4164
154 Ga0307409_100054008 3300031995 Bacteria 3091
155 Ga0307409_100080579 3300031995 Bacteria 2628
156 Ga0307409_100116742 3300031995 Bacteria 2250
157 Ga0307414_10002859 3300032004 Bacteria 9116
158 Ga0307414_10020829 3300032004 Bacteria 4095
159 Ga0395905_0193913 3300037471 Bacteria 1905
160 Ga0395901_0016550 3300038443 Bacteria 7514
161 Ga0439461_0000035 3300041410 Bacteria 16828
162 Ga0439465_0002240 3300041413 Bacteria 6348
163 Ga0439431_0000494 3300041997 Bacteria 8345
164 Ga0439442_000450 3300042002 Bacteria 9348
165 Ga0439445_0000927 3300042004 Bacteria 6224
166 Ga0439448_0012967 3300042005 Bacteria 2501
167 Ga0439448_0020365 3300042005 Bacteria 2051
168 Ga0439455_0015180 3300042012 Bacteria 1768
169 Ga0439458_0001625 3300042157 Bacteria 5609
170 Ga0439458_0003265 3300042157 Bacteria 3826
171 Ga0439458_0005310 3300042157 Bacteria 2898
172 Ga0439434_0000065 3300042435 Bacteria 25739
173 Ga0466968_0011803 3300044735 Bacteria 3407
174 Ga0495617_006075 3300046452 Bacteria 4254
175 Ga0495627_000079 3300046453 Bacteria 118475
176 Ga0495638_0000018 3300046460 Bacteria 389696
177 Ga0495638_0015038 3300046460 Bacteria 5210
178 Ga0495650_0004817 3300046471 Bacteria 9043
179 Ga0495584_0056894 3300046491 Bacteria 1968
180 Ga0495583_0000027 3300046506 Bacteria 256299
181 Ga0495583_0000455 3300046506 Bacteria 60841
182 Ga0495606_0059335 3300046507 Bacteria 2455
183 Ga0495606_0072580 3300046507 Bacteria 2162
184 Ga0495610_0000095 3300046512 Bacteria 104629
185 Ga0495616_0000007 3300046513 Bacteria 227689
186 Ga0495632_0000875 3300046519 Bacteria 26472
187 Ga0495632_0005089 3300046519 Bacteria 8795
188 Ga0495637_0003798 3300046520 Bacteria 7940
189 Ga0495637_0032923 3300046520 Bacteria 2280
190 Ga0495643_0000014 3300046522 Bacteria 314632
191 Ga0495648_0000144 3300046524 Bacteria 85412
192 Ga0495648_0046722 3300046524 Bacteria 2681
193 Ga0495663_0000007 3300046525 Bacteria 262438
194 Ga0495633_0000818 3300046558 Bacteria 27547
195 Ga0495668_0015767 3300046616 Bacteria 4405
196 Ga0495670_0004615 3300046691 Bacteria 6754
197 Ga0495671_0000058 3300046692 Bacteria 113487
198 Ga0495671_0000148 3300046692 Bacteria 61293
199 Ga0495673_0000088 3300047469 Bacteria 189812
200 Ga0495673_0005413 3300047469 Bacteria 7722
201 Ga0495681_0000008 3300047470 Bacteria 215295
202 Ga0495681_0038236 3300047470 Bacteria 2354
203 Ga0495686_0000132 3300047472 Bacteria 151609
204 Ga0495686_0000201 3300047472 Bacteria 110982
205 Ga0495686_0006272 3300047472 Bacteria 9146
206 Ga0496100_0058521 3300048903 Bacteria 2529
207 Ga0496102_0000634 3300048905 Bacteria 35771
208 Ga0496103_0000269 3300048906 Bacteria 49279
209 Ga0496104_0000682 3300048907 Bacteria 29174
210 Ga0496105_0001681 3300048908 Bacteria 15781
211 Ga0496108_0017583 3300048911 Bacteria 5850
212 Ga0496108_0130995 3300048911 Bacteria 2156
213 Ga0496112_0009604 3300048915 Bacteria 8726
214 Ga0496113_0000349 3300048916 Bacteria 22037
215 Ga0496117_0001496 3300048920 Bacteria 33496
216 Ga0496117_0006488 3300048920 Bacteria 11810
217 Ga0496117_0086242 3300048920 Bacteria 2041
218 Ga0496118_0000863 3300048921 Bacteria 47989
219 Ga0496118_0003498 3300048921 Bacteria 19698
220 Ga0496118_0063687 3300048921 Bacteria 2711
221 Ga0496119_0003117 3300048922 Bacteria 17487
222 Ga0496120_0011370 3300048923 Bacteria 6123
223 Ga0496121_0000175 3300048924 Bacteria 142910
224 Ga0496121_0004117 3300048924 Bacteria 19931
225 Ga0496121_0010882 3300048924 Bacteria 10169
226 Ga0496121_0031183 3300048924 Bacteria 4876
227 Ga0496121_0037062 3300048924 Bacteria 4335
228 Ga0496121_0071939 3300048924 Bacteria 2779
229 Ga0496122_0000385 3300048925 Bacteria 94046
230 Ga0496122_0001118 3300048925 Bacteria 46231
231 Ga0496122_0001342 3300048925 Bacteria 40140
232 Ga0496122_0018286 3300048925 Bacteria 6487
233 Ga0496123_0001709 3300048926 Bacteria 29334
234 Ga0496123_0019870 3300048926 Bacteria 5273
235 Ga0496124_0000897 3300048927 Bacteria 48151
236 Ga0496124_0001421 3300048927 Bacteria 35525
237 Ga0496124_0002579 3300048927 Bacteria 23478
238 Ga0496124_0010217 3300048927 Bacteria 9535
239 Ga0496124_0017579 3300048927 Bacteria 6735
240 Ga0496124_0058626 3300048927 Bacteria 3237
241 Ga0496124_0112387 3300048927 Bacteria 2190
242 Ga0496125_0001325 3300048928 Bacteria 36561
243 Ga0496125_0002195 3300048928 Bacteria 26067
244 Ga0496125_0012625 3300048928 Bacteria 8365
245 Ga0496125_0062205 3300048928 Bacteria 2987
246 Ga0496126_0000051 3300048929 Bacteria 313169
247 Ga0496126_0012625 3300048929 Bacteria 8643
248 Ga0496126_0012875 3300048929 Bacteria 8545
249 Ga0496126_0042411 3300048929 Bacteria 4202
250 Ga0496126_0153921 3300048929 Bacteria 1969
251 Ga0495678_010919 3300049459 Bacteria 4376
252 Ga0495682_0018738 3300049460 Bacteria 2607
253 Ga0501292_000042 3300049515 Bacteria 29474
254 Ga0501294_000466 3300049517 Bacteria 4752
255 Ga0501034_0006499 3300049571 Bacteria 12580
256 Ga0501043_0088975 3300049579 Bacteria 2427
257 Ga0501047_0125781 3300049581 Bacteria 2444
258 Ga0501206_000299 3300049653 Bacteria 5760
259 Ga0501207_002237 3300049654 Bacteria 2488
260 Ga0501211_000650 3300049658 Bacteria 3493
261 Ga0501223_000094 3300049663 Bacteria 25980
262 Ga0501223_000131 3300049663 Bacteria 21002
263 Ga0501224_000016 3300049664 Bacteria 86205
264 Ga0501224_000206 3300049664 Bacteria 6733
265 Ga0501227_001203 3300049665 Bacteria 5798
266 Ga0501235_000322 3300049669 Bacteria 9076
267 Ga0501235_002061 3300049669 Bacteria 4319
268 Ga0501259_001551 3300049688 Bacteria 3823
269 Ga0501261_000021 3300049690 Bacteria 37511
270 Ga0501225_0000016 3300049705 Bacteria 64948
271 Ga0501225_0000053 3300049705 Bacteria 39246
272 Ga0501225_0004547 3300049705 Bacteria 4126
273 Ga0501279_000010 3300049775 Bacteria 103375
274 Ga0501280_000454 3300049776 Bacteria 9805
275 Ga0501281_00391 3300049777 Bacteria 4397
276 Ga0501282_001407 3300049778 Bacteria 2666
277 Ga0501044_0000469 3300049823 Bacteria 49092
278 Ga0501044_0025582 3300049823 Bacteria 6257
279 Ga0501226_000020 3300049853 Bacteria 141193
280 nmdc:mga06z11_9_c1 3300050494 Bacteria 109982
281 nmdc:mga04h51_128_c1 3300050495 Bacteria 22007
282 nmdc:mga07m45_9315_c1 3300050496 Bacteria 5089
283 Ga0500643_000162 3300053087 Bacteria 66736
284 Ga0500643_028340 3300053087 Bacteria 1734
285 Ga0500555_000034 3300053103 Bacteria 82796
286 Ga0500592_007117 3300053116 Bacteria 1780
287 Ga0500559_0004343 3300053136 Bacteria 6754
288 Ga0500568_0007974 3300053139 Bacteria 5144
289 Ga0500590_039013 3300053148 Bacteria 2448
290 Ga0500604_0002448 3300053151 Bacteria 5059
291 Ga0500622_0002213 3300053156 Bacteria 14343
292 Ga0500624_000113 3300053157 Bacteria 38063
293 Ga0500627_0001666 3300053158 Bacteria 6285
294 Ga0500661_000116 3300055283 Bacteria 13116
295 2512641903 2512564014 Bacteria 4639632
296 2585260582 2582581305 Bacteria 4895574
297 2600202921 2599185354 Bacteria 4398675
298 2600228676 2599185359 Bacteria 4772316
299 2644128938 2643221622 Bacteria 4212502
300 2753767285 2751185897 Bacteria 5322941
301 2778123767 2775507255 Bacteria 3945731
302 2809064694 2808606401 Bacteria 4586670
303 2809080637 2808606404 Bacteria 4652788
304 2809085002 2808606405 Bacteria 4586632
305 2819714526 2818991466 Bacteria 4748179
306 2879164964 2879163058 Bacteria 4223965
307 2880519586 2880518877 Bacteria 5012590
308 2885432718 2885429604 Bacteria 3642894
309 2919711585 2919709256 Bacteria 4318106
310 2928529028 2928526807 Bacteria 4760224
311 2928968546 2928968154 Bacteria 4633371
312 Ga0496120_0035716
313 SwRhRL2b_contig_1006216
314 JGI24736J21556_1000285
315 JGI24736J21556_1003513
316 JGI24741J21665_1000044
317 JGI24740J21852_10000438
318 JGI24739J22299_10004666
319 JGI24737J22298_10001487
320 JGI24737J22298_10006823
321 JGI24735J21928_10001621
322 JGI24735J21928_10003314
323 JGI24738J21930_10001237
324 Ga0055542_1007267
325 Ga0055524_1000095
326 Ga0055530_10000044
327 Ga0055531_10000072
328 Ga0055531_10000338
329 Ga0055531_10003147
330 Ga0065165_1002973
331 Ga0065704_10001606
332 Ga0065704_10070888
333 Ga0065704_10077467
334 Ga0065704_10103796
335 Ga0065707_10104109
336 Ga0070660_100000017
337 Ga0070661_100013209
338 Ga0070668_100001881
339 Ga0070668_100004448
340 Ga0070668_100005215
341 Ga0070669_100000061
342 Ga0070669_100026630
343 Ga0070669_100094808
344 Ga0070669_100106687
345 Ga0070671_100001588
346 Ga0070674_100023945
347 Ga0070667_100000014
348 Ga0070667_100000276
349 Ga0070667_100008649
350 Ga0070667_100112460
351 Ga0070663_100000560
352 Ga0070662_100002285
353 Ga0070662_100019179
354 Ga0068853_100004367
355 Ga0068853_100185321
356 Ga0070665_100000871
357 Ga0070665_100013875
358 Ga0068855_100260209
359 Ga0068856_100016880
360 Ga0068852_100010238
361 Ga0068859_100083174
362 Ga0068864_100002224
363 Ga0068864_100156613
364 Ga0068863_100000006
365 Ga0068863_100000114
366 Ga0068863_100017005
367 Ga0068860_100000386
368 Ga0068860_100006289
369 Ga0068860_100015167
370 Ga0068862_100000251
371 Ga0068862_100008165
372 Ga0068862_100041276
373 Ga0075368_10000269
374 Ga0075367_10000067
375 Ga0075366_10068794
376 Ga0075370_10036814
377 Ga0097620_100083177
378 Ga0105247_10046418
379 Ga0105243_10085230
380 Ga0105241_10002180
381 Ga0105248_10008158
382 Ga0105248_10062295
383 Ga0105248_10118567
384 Ga0105238_10027745
385 Ga0105238_10063975
386 Ga0105249_10000086
387 Ga0105249_10055302
388 Ga0105148_100036
389 Ga0105239_10000694
390 Ga0157373_10095058
391 Ga0157369_10055934
392 Ga0157380_10150882
393 Ga0183363_1005
394 Ga0163161_10085187
395 Ga0209147_101506
396 Ga0209148_1000160
397 Ga0209565_1000008
398 Ga0209673_1004523
399 Ga0209675_1012982
400 Ga0209050_1000014
401 Ga0209050_1006288
402 Ga0209256_1000009
403 Ga0209256_1000010
404 Ga0209257_1000019
405 Ga0209257_1003192
406 Ga0207696_1008366
407 Ga0207710_10001111
408 Ga0207680_10002893
409 Ga0207647_10001567
410 Ga0207647_10002697
411 Ga0207647_10013358
412 Ga0207647_10025399
413 Ga0207695_10002114
414 Ga0207657_10000455
415 Ga0207657_10002424
416 Ga0207681_10000019
417 Ga0207681_10020955
418 Ga0207681_10076754
419 Ga0207694_10017456
420 Ga0207694_10027457
421 Ga0207650_10031448
422 Ga0207644_10003349
423 Ga0207706_10022332
424 Ga0207669_10120027
425 Ga0207704_10098383
426 Ga0207711_10060130
427 Ga0207711_10311471
428 Ga0207667_10182906
429 Ga0207712_10000026
430 Ga0207712_10032213
431 Ga0207668_10000531
432 Ga0207668_10002452
433 Ga0207668_10021016
434 Ga0207668_10035189
435 Ga0207640_10004391
436 Ga0207658_10000017
437 Ga0207658_10000262
438 Ga0207658_10001459
439 Ga0207639_10003276
440 Ga0207639_10006542
441 Ga0207639_10041939
442 Ga0207678_10002436
443 Ga0207702_10018339
444 Ga0207641_10000054
445 Ga0207641_10000092
446 Ga0207641_10005570
447 Ga0207676_10124845
448 Ga0207674_10002653
449 Ga0207674_10024706
450 Ga0207674_10042976
451 Ga0209813_10000041
452 Ga0268266_10000675
453 Ga0268266_10007919
454 Ga0268265_10000256
455 Ga0268265_10008757
456 Ga0268264_10000040
457 Ga0268264_10001540
458 Ga0268264_10004598
459 Ga0268264_10057066
460 Ga0307513_10016928
461 Ga0307405_10176276
462 Ga0307412_10001228
463 Ga0307412_10006619
464 Ga0307412_10018844
465 Ga0307409_100054008
466 Ga0307409_100080579
467 Ga0307409_100116742
468 Ga0307414_10002859
469 Ga0307414_10020829
470 Ga0395905_0193913
471 Ga0395901_0016550
472 Ga0439461_0000035
473 Ga0439465_0002240
474 Ga0439431_0000494
475 Ga0439442_000450
476 Ga0439445_0000927
477 Ga0439448_0012967
478 Ga0439448_0020365
479 Ga0439455_0015180
480 Ga0439458_0001625
481 Ga0439458_0003265
482 Ga0439458_0005310
483 Ga0439434_0000065
484 Ga0466968_0011803
485 Ga0495617_006075
486 Ga0495627_000079
487 Ga0495638_0000018
488 Ga0495638_0015038
489 Ga0495650_0004817
490 Ga0495584_0056894
491 Ga0495583_0000027
492 Ga0495583_0000455
493 Ga0495606_0059335
494 Ga0495606_0072580
495 Ga0495610_0000095
496 Ga0495616_0000007
497 Ga0495632_0000875
498 Ga0495632_0005089
499 Ga0495637_0003798
500 Ga0495637_0032923
501 Ga0495643_0000014
502 Ga0495648_0000144
503 Ga0495648_0046722
504 Ga0495663_0000007
505 Ga0495633_0000818
506 Ga0495668_0015767
507 Ga0495670_0004615
508 Ga0495671_0000058
509 Ga0495671_0000148
510 Ga0495673_0000088
511 Ga0495673_0005413
512 Ga0495681_0000008
513 Ga0495681_0038236
514 Ga0495686_0000132
515 Ga0495686_0000201
516 Ga0495686_0006272
517 Ga0496100_0058521
518 Ga0496102_0000634
519 Ga0496103_0000269
520 Ga0496104_0000682
521 Ga0496105_0001681
522 Ga0496108_0017583
523 Ga0496108_0130995
524 Ga0496112_0009604
525 Ga0496113_0000349
526 Ga0496117_0001496
527 Ga0496117_0006488
528 Ga0496117_0086242
529 Ga0496118_0000863
530 Ga0496118_0003498
531 Ga0496118_0063687
532 Ga0496119_0003117
533 Ga0496120_0011370
534 Ga0496121_0000175
535 Ga0496121_0004117
536 Ga0496121_0010882
537 Ga0496121_0031183
538 Ga0496121_0037062
539 Ga0496121_0071939
540 Ga0496122_0000385
541 Ga0496122_0001118
542 Ga0496122_0001342
543 Ga0496122_0018286
544 Ga0496123_0001709
545 Ga0496123_0019870
546 Ga0496124_0000897
547 Ga0496124_0001421
548 Ga0496124_0002579
549 Ga0496124_0010217
550 Ga0496124_0017579
551 Ga0496124_0058626
552 Ga0496124_0112387
553 Ga0496125_0001325
554 Ga0496125_0002195
555 Ga0496125_0012625
556 Ga0496125_0062205
557 Ga0496126_0000051
558 Ga0496126_0012625
559 Ga0496126_0012875
560 Ga0496126_0042411
561 Ga0496126_0153921
562 Ga0495678_010919
563 Ga0495682_0018738
564 Ga0501292_000042
565 Ga0501294_000466
566 Ga0501034_0006499
567 Ga0501043_0088975
568 Ga0501047_0125781
569 Ga0501206_000299
570 Ga0501207_002237
571 Ga0501211_000650
572 Ga0501223_000094
573 Ga0501223_000131
574 Ga0501224_000016
575 Ga0501224_000206
576 Ga0501227_001203
577 Ga0501235_000322
578 Ga0501235_002061
579 Ga0501259_001551
580 Ga0501261_000021
581 Ga0501225_0000016
582 Ga0501225_0000053
583 Ga0501225_0004547
584 Ga0501279_000010
585 Ga0501280_000454
586 Ga0501281_00391
587 Ga0501282_001407
588 Ga0501044_0000469
589 Ga0501044_0025582
590 Ga0501226_000020
591 nmdc:mga06z11_9_c1
592 nmdc:mga04h51_128_c1
593 nmdc:mga07m45_9315_c1
594 Ga0500643_000162
595 Ga0500643_028340
596 Ga0500555_000034
597 Ga0500592_007117
598 Ga0500559_0004343
599 Ga0500568_0007974
600 Ga0500590_039013
601 Ga0500604_0002448
602 Ga0500622_0002213
603 Ga0500624_000113
604 Ga0500627_0001666
605 Ga0500661_000116
606 2512641903
607 2585260582
608 2600202921
609 2600228676
610 2644128938
611 2753767285
612 2778123767
613 2809064694
614 2809080637
615 2809085002
616 2819714526
617 2879164964
618 2880519586
619 2885432718
620 2919711585
621 2928529028
622 2928968546

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00982

Glyco_transf_20

Glycosyltransferase family 20

15

469

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5tvg-assembly5.cif.gz_G crystal structure of an alpha,alpha-trehalose-phosphate synthase (udp-forming) from burkholderia vietnamiensis 0.9752 2 454
5tvg-assembly5.cif.gz_G crystal structure of an alpha,alpha-trehalose-phosphate synthase (udp-forming) from burkholderia vietnamiensis 0.973 2 454
5tvg-assembly4.cif.gz_C crystal structure of an alpha,alpha-trehalose-phosphate synthase (udp-forming) from burkholderia vietnamiensis 0.9719 1 455
5tvg-assembly6.cif.gz_H crystal structure of an alpha,alpha-trehalose-phosphate synthase (udp-forming) from burkholderia vietnamiensis 0.9694 2 453
1uqt-assembly1.cif.gz_B trehalose-6-phosphate from e. coli bound with udp-2-fluoro glucose. 0.9691 2 455
ID Description Score Start End Superfamily
af_Q9Y119_299_464_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9665 255 419 3.40.50.2000
af_Q9Y119_299_464_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9552 255 419 3.40.50.2000
af_I1KSJ3_331_534_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9518 235 436 3.40.50.2000
2wtxC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9489 2 228 3.40.50.2000
af_Q54NU9_301_505_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9472 235 435 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A3C0W7Y9-F1-model_v4 Trehalose-6-phosphate synthase 0.9844 73 455 GO:0003825
GO:0005992
AF-A0A1M3HFC0-F1-model_v4 Trehalose-6-phosphate synthase 0.9825 1 454 GO:0003825
GO:0005992
AF-A0A060BZG4-F1-model_v4 Glyco_transf_20 0.9818 271 420 GO:0003825
GO:0005992
AF-A0A1M3HFC0-F1-model_v4 Trehalose-6-phosphate synthase 0.9803 1 454 GO:0003825
GO:0005992
AF-A0A060BNU4-F1-model_v4 Glyco_transf_20 0.9792 74 239 GO:0003825
GO:0005992

Map