F401473

General Info

Members Datasets Scaffolds Average Seq Length
311 222 622 485

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2739367654|2739604751
Length 517
Sequence QNVAAGFAVVLEPTNLLYCLVGVVIGMLIGVLPGLGPAATIAILLPLTYGVEPVTAIIMLAGIFYGAQYGGTITSVLLRLPGEASSVVTVLDGHALARKGKAGTALGVAAVGSFIGGTVAIVGLTFLAPVVAGFALDFGPPEYAALALLGILLVSTIASGAKVKALIAAAIGLLLATVGRDAFTGAERFTFDSLSLADGIDFVPVAMGLFGLGEILYNLEERHRAVHAPGKVANVWPSRKDLKESSGAVTRGSVLGFFLGILPGGGATIASMAAYAAEKKRAKDPSRFGKGAIEGVAGPETANNAAATSSFIPLLTLGIPANATMALMFGALLIQGITPGPQLVSEHPELFWGVVNSMYIGNVLLLIMSIPLVGVFVRILRVRAAILAPVTALITMIGAYTINNSVFDVLLVVVFGAVGYLMKKFGFEPGPLVLAFVLGSLLESSLRRSLLMFDGSAAGFFTRPISATLLVVFVVVAALPLIRAVRERRAAVPAGVAAAADGSSDGASAKNREEESV

Samples

Sample ID Description Type Environment
1 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
6 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
7 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
8 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
9 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
11 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
31 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
32 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
43 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
47 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
50 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
68 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
69 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
70 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
71 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
72 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
73 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
74 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
75 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
78 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
79 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
80 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
84 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
85 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
86 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
87 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
88 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
89 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
90 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
91 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
92 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
93 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
94 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
95 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
96 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
97 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
98 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
99 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
100 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
101 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
102 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
110 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
113 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
114 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
115 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
116 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
117 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
118 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
119 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
120 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
121 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
122 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
123 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
124 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
130 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
131 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
132 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
135 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
138 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
139 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
140 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
141 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
142 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
143 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
144 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
145 2516143018 Ensifer sp. BR816 Isolate Nodule
146 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
147 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
148 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
149 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
150 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
151 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
152 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
153 2643221569 Achromobacter sp. Root565 Isolate Unclassified
154 2643221594 Achromobacter sp. Root170 Isolate Unclassified
155 2643221621 Achromobacter sp. Root83 Isolate Unclassified
156 2643221733 Bosea sp. Root381 Isolate Unclassified
157 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
158 2671180694 Paenibacillus sp. A3 Isolate Unclassified
159 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
160 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
161 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
162 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
163 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
164 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
165 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
166 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
167 2773857925 Microvirga vignae BR3299 Isolate Unclassified
168 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
169 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
170 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
171 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
172 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
173 2808606372 Agromyces sp. 23-23 Isolate Unclassified
174 2808606394 Promicromonospora sp. C35 Isolate Unclassified
175 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
176 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
177 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
178 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
179 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
180 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
181 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
182 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
183 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
184 2855730933 Achromobacter sp. HZ28 Isolate Nodule
185 2855767633 Achromobacter sp. HZ34 Isolate Nodule
186 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
187 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
188 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
189 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
190 2858868258 Micromonospora sp. MH33 Isolate Unclassified
191 2858950400 Achromobacter sp. K91 Isolate Unclassified
192 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
193 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
194 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
195 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
196 2881927736 Candidimonas sp. SYP-B2681 Isolate Rhizosphere
197 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
198 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
199 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
200 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
201 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
202 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
203 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
204 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
205 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
206 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
207 2941479691
208 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
209 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
210 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
211 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
212 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
213 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
214 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
215 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
216 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
217 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere
218 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
219 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
220 8005688590 Rhizobium bangladeshense 1024 Isolate Nodule
221 8048746797 Alcaligenes endophyticus DSM 100498 Isolate Unclassified
222 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 70.1
Metatranscriptomes 0
Isolates 29.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.72
Nodule 5.79
Rhizoplane 11.25
Rhizosphere 50.16
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1000340 3300000549 Bacteria 8077
2 JGI25156J39149_1002427 3300002705 Bacteria 6690
3 JGI25154J39366_1001040 3300002738 Bacteria 11091
4 JGI25406J46586_10002873 3300003203 Bacteria 8117
5 Ga0055542_1001697 3300003762 Bacteria 9602
6 Ga0055536_1001109 3300003781 Bacteria 16921
7 Ga0055541_1001569 3300003841 Bacteria 4905
8 Ga0058692_1013197 3300003856 Bacteria 1933
9 Ga0065714_10067671 3300005288 Bacteria 5297
10 Ga0065712_10104311 3300005290 Bacteria 1964
11 Ga0070676_10074869 3300005328 Bacteria 2040
12 Ga0070670_100000725 3300005331 Bacteria 25600
13 Ga0070668_100023540 3300005347 Bacteria 4659
14 Ga0070668_100074670 3300005347 Bacteria 2646
15 Ga0070669_100027605 3300005353 Bacteria 4086
16 Ga0070675_100002711 3300005354 Bacteria 13312
17 Ga0070671_100021298 3300005355 Bacteria 5296
18 Ga0070711_100098771 3300005439 Bacteria 2120
19 Ga0070708_100136752 3300005445 Bacteria 2270
20 Ga0070678_100007660 3300005456 Bacteria 6419
21 Ga0070672_100043545 3300005543 Bacteria 3462
22 Ga0081455_10003823 3300005937 Bacteria 17186
23 Ga0081538_10001432 3300005981 Bacteria 24526
24 Ga0081538_10001972 3300005981 Bacteria 20525
25 Ga0081539_10000944 3300005985 Bacteria 54445
26 Ga0075365_10026335 3300006038 Bacteria 3691
27 Ga0075365_10051191 3300006038 Bacteria 2727
28 Ga0075364_10000017 3300006051 Bacteria 57005
29 Ga0075364_10006600 3300006051 Bacteria 6832
30 Ga0075364_10026196 3300006051 Bacteria 3718
31 Ga0075364_10038308 3300006051 Bacteria 3106
32 Ga0075432_10001861 3300006058 Bacteria 6970
33 Ga0070712_100020930 3300006175 Bacteria 4287
34 Ga0070712_100041811 3300006175 Bacteria 3149
35 Ga0075428_100024727 3300006844 Bacteria 6646
36 Ga0075434_100170609 3300006871 Bacteria 2195
37 Ga0079104_1000029 3300006946 Bacteria 207648
38 Ga0105244_10023786 3300009036 Bacteria 3354
39 Ga0105247_10036959 3300009101 Bacteria 2978
40 Ga0114129_10008524 3300009147 Bacteria 14611
41 Ga0105243_10080666 3300009148 Bacteria 2654
42 Ga0105246_10004702 3300011119 Bacteria 8312
43 Ga0105246_10158734 3300011119 Bacteria 1721
44 Ga0157371_10035398 3300013102 Bacteria 3577
45 Ga0157369_10138033 3300013105 Bacteria 2580
46 Ga0157378_10240621 3300013297 Bacteria 1729
47 Ga0163162_10214238 3300013306 Bacteria 2056
48 Ga0157372_10164850 3300013307 Bacteria 2562
49 Ga0157379_10216060 3300014968 Bacteria 1737
50 Ga0163161_10066886 3300017792 Bacteria 2624
51 Ga0209784_100687 3300025224 Bacteria 9415
52 Ga0209566_100519 3300025225 Bacteria 26446
53 Ga0209674_100456 3300025226 Bacteria 18609
54 Ga0209646_1000022 3300025246 Bacteria 446621
55 Ga0209677_106401 3300025253 Bacteria 2789
56 Ga0209148_1000158 3300025254 Bacteria 140830
57 Ga0209759_1003453 3300025256 Bacteria 6282
58 Ga0209050_1003679 3300025298 Bacteria 11057
59 Ga0207697_10017098 3300025315 Bacteria 2981
60 Ga0207642_10040287 3300025899 Bacteria 2037
61 Ga0207647_10007267 3300025904 Bacteria 8018
62 Ga0207645_10055136 3300025907 Bacteria 2538
63 Ga0207643_10040981 3300025908 Bacteria 2609
64 Ga0207693_10003847 3300025915 Bacteria 12785
65 Ga0207693_10030007 3300025915 Bacteria 4292
66 Ga0207650_10016318 3300025925 Bacteria 5190
67 Ga0207706_10049810 3300025933 Bacteria 3701
68 Ga0207691_10000865 3300025940 Bacteria 30095
69 Ga0207679_10146146 3300025945 Bacteria 1918
70 Ga0207668_10022538 3300025972 Bacteria 4034
71 Ga0207678_10013871 3300026067 Bacteria 7079
72 Ga0207674_10074071 3300026116 Bacteria 3417
73 Ga0207683_10021771 3300026121 Bacteria 5496
74 Ga0209281_1000118 3300027111 Bacteria 208448
75 Ga0207428_10020419 3300027907 Bacteria 5629
76 Ga0307515_10017033 3300028794 Bacteria 13273
77 Ga0307515_10054020 3300028794 Bacteria 5908
78 Ga0307515_10196209 3300028794 Bacteria 1910
79 Ga0307408_100009285 3300031548 Bacteria 6483
80 Ga0307408_100009510 3300031548 Bacteria 6413
81 Ga0307408_100011255 3300031548 Bacteria 5908
82 Ga0307408_100016448 3300031548 Bacteria 4938
83 Ga0307408_100042948 3300031548 Bacteria 3214
84 Ga0307408_100125881 3300031548 Bacteria 1992
85 Ga0307405_10004721 3300031731 Bacteria 6486
86 Ga0307405_10043268 3300031731 Bacteria 2746
87 Ga0307413_10024648 3300031824 Bacteria 3283
88 Ga0307413_10036441 3300031824 Bacteria 2831
89 Ga0307413_10049829 3300031824 Bacteria 2512
90 Ga0307413_10136989 3300031824 Bacteria 1685
91 Ga0307410_10009846 3300031852 Bacteria 5384
92 Ga0307410_10016415 3300031852 Bacteria 4417
93 Ga0307410_10036944 3300031852 Bacteria 3186
94 Ga0307410_10039459 3300031852 Bacteria 3100
95 Ga0307410_10052430 3300031852 Bacteria 2755
96 Ga0307410_10064639 3300031852 Bacteria 2514
97 Ga0307410_10138509 3300031852 Bacteria 1797
98 Ga0307406_10009685 3300031901 Bacteria 5417
99 Ga0307407_10000968 3300031903 Bacteria 9793
100 Ga0307407_10100617 3300031903 Bacteria 1793
101 Ga0307412_10003030 3300031911 Bacteria 9302
102 Ga0307412_10006920 3300031911 Bacteria 6433
103 Ga0307412_10010900 3300031911 Bacteria 5248
104 Ga0307412_10017962 3300031911 Bacteria 4243
105 Ga0307412_10059153 3300031911 Bacteria 2567
106 Ga0307412_10165758 3300031911 Bacteria 1647
107 Ga0307409_100015351 3300031995 Bacteria 5024
108 Ga0307409_100071614 3300031995 Bacteria 2757
109 Ga0307409_100075477 3300031995 Bacteria 2699
110 Ga0307409_100078393 3300031995 Bacteria 2658
111 Ga0307416_100009014 3300032002 Bacteria 6492
112 Ga0307416_100017212 3300032002 Bacteria 5049
113 Ga0307416_100033186 3300032002 Bacteria 3910
114 Ga0307416_100034584 3300032002 Bacteria 3847
115 Ga0307416_100054949 3300032002 Bacteria 3203
116 Ga0307416_100077450 3300032002 Bacteria 2793
117 Ga0307416_100156620 3300032002 Bacteria 2098
118 Ga0307414_10015024 3300032004 Bacteria 4664
119 Ga0307414_10020873 3300032004 Bacteria 4092
120 Ga0307414_10096129 3300032004 Bacteria 2216
121 Ga0307415_100010349 3300032126 Bacteria 5279
122 Ga0307415_100034975 3300032126 Bacteria 3277
123 Ga0307415_100077962 3300032126 Bacteria 2355
124 Ga0307415_100174151 3300032126 Bacteria 1681
125 Ga0307415_100191227 3300032126 Bacteria 1615
126 Ga0373946_0032688 3300035171 Bacteria 2091
127 Ga0373927_0064668 3300035695 Bacteria 2366
128 Ga0395900_0174464 3300037418 Bacteria 2187
129 Ga0395898_0021657 3300037466 Bacteria 6515
130 Ga0395905_0310673 3300037471 Bacteria 1465
131 Ga0439436_0000771 3300041404 Bacteria 8670
132 Ga0439436_0015212 3300041404 Bacteria 2315
133 Ga0439465_0011354 3300041413 Bacteria 2795
134 Ga0451797_0567160 3300041453 Bacteria 1914
135 Ga0439433_0005661 3300041999 Bacteria 2682
136 Ga0439433_0016161 3300041999 Bacteria 1651
137 Ga0439449_0000543 3300042007 Bacteria 14119
138 Ga0439449_0005620 3300042007 Bacteria 4795
139 Ga0439434_0007974 3300042435 Bacteria 3104
140 Ga0453684_0107847 3300044712 Bacteria 3390
141 Ga0495641_0058842 3300046461 Bacteria 1738
142 Ga0495642_0013325 3300046528 Bacteria 3179
143 Ga0495642_0039729 3300046528 Bacteria 1910
144 Ga0495656_0001041 3300046615 Bacteria 8951
145 Ga0495668_0039134 3300046616 Bacteria 2648
146 Ga0495588_0002772 3300046674 Bacteria 7529
147 Ga0495670_0001465 3300046691 Bacteria 11528
148 Ga0495581_0020072 3300047315 Bacteria 3879
149 Ga0495636_0001437 3300047318 Bacteria 9007
150 Ga0495593_0033212 3300047673 Bacteria 2811
151 Ga0496101_0137038 3300048904 Bacteria 1863
152 Ga0496102_0008427 3300048905 Bacteria 8836
153 Ga0496102_0032006 3300048905 Bacteria 4723
154 Ga0496103_0005242 3300048906 Bacteria 7786
155 Ga0496103_0008252 3300048906 Bacteria 6184
156 Ga0496103_0011009 3300048906 Bacteria 5353
157 Ga0496104_0001808 3300048907 Bacteria 18537
158 Ga0496104_0002463 3300048907 Bacteria 15951
159 Ga0496104_0011280 3300048907 Bacteria 8000
160 Ga0496104_0011322 3300048907 Bacteria 7986
161 Ga0496104_0118923 3300048907 Bacteria 2537
162 Ga0496105_0013402 3300048908 Bacteria 6506
163 Ga0496105_0021323 3300048908 Bacteria 5242
164 Ga0496105_0204191 3300048908 Bacteria 1612
165 Ga0496106_0065944 3300048909 Bacteria 2756
166 Ga0496107_0012187 3300048910 Bacteria 5999
167 Ga0496108_0000521 3300048911 Bacteria 30116
168 Ga0496109_0000193 3300048912 Bacteria 60451
169 Ga0496109_0150291 3300048912 Bacteria 2180
170 Ga0496110_0007650 3300048913 Bacteria 8646
171 Ga0496110_0022597 3300048913 Bacteria 5342
172 Ga0496110_0193290 3300048913 Bacteria 1848
173 Ga0496111_0012877 3300048914 Bacteria 5675
174 Ga0496111_0089729 3300048914 Bacteria 2251
175 Ga0496112_0112016 3300048915 Bacteria 2698
176 Ga0496113_0000245 3300048916 Bacteria 25607
177 Ga0496114_0060679 3300048917 Bacteria 3161
178 Ga0496115_0006599 3300048918 Bacteria 8505
179 Ga0496117_0040634 3300048920 Bacteria 3417
180 Ga0496118_0033889 3300048921 Bacteria 4179
181 Ga0496119_0026955 3300048922 Bacteria 3967
182 Ga0496119_0065587 3300048922 Bacteria 2150
183 Ga0496120_0005138 3300048923 Bacteria 10575
184 Ga0496121_0000174 3300048924 Bacteria 143186
185 Ga0496122_0003228 3300048925 Bacteria 21667
186 Ga0496122_0026210 3300048925 Bacteria 5034
187 Ga0496123_0001818 3300048926 Bacteria 28065
188 Ga0496123_0011485 3300048926 Bacteria 7671
189 Ga0496123_0056728 3300048926 Bacteria 2556
190 Ga0496124_0000013 3300048927 Bacteria 484884
191 Ga0496124_0047178 3300048927 Bacteria 3686
192 Ga0496125_0000093 3300048928 Bacteria 210896
193 Ga0496125_0021837 3300048928 Bacteria 5956
194 Ga0496125_0038730 3300048928 Bacteria 4118
195 Ga0501032_0007933 3300049569 Bacteria 7731
196 Ga0501033_0026025 3300049570 Bacteria 4403
197 Ga0501038_0017889 3300049574 Bacteria 6404
198 Ga0501039_0163980 3300049575 Bacteria 1747
199 Ga0501043_0042306 3300049579 Bacteria 3580
200 Ga0501043_0140127 3300049579 Bacteria 1894
201 Ga0501070_0030040 3300049586 Bacteria 4554
202 Ga0501071_0057743 3300049587 Bacteria 2805
203 Ga0501072_0001346 3300049588 Bacteria 18408
204 Ga0501072_0055963 3300049588 Bacteria 3109
205 Ga0501073_0013617 3300049589 Bacteria 5916
206 Ga0501044_0074270 3300049823 Bacteria 3455
207 nmdc:mga00v17_10911_c1 3300050491 Bacteria 4978
208 nmdc:mga00v17_290_c1 3300050491 Bacteria 29332
209 nmdc:mga00v17_522_c1 3300050491 Bacteria 21549
210 nmdc:mga00v17_7133_c1 3300050491 Bacteria 5954
211 nmdc:mga0yw44_2154_c1 3300050492 Bacteria 8264
212 nmdc:mga0yw44_65364_c1 3300050492 Bacteria 2241
213 nmdc:mga05p37_7504_c2 3300050507 Bacteria 5937
214 Ga0495655_0009359 3300053083 Bacteria 1897
215 Ga0500616_0019891 3300053153 Bacteria 3777
216 Ga0500636_0000267 3300053177 Bacteria 28795
217 Ga0500636_0000882 3300053177 Bacteria 16069
218 Ga0590077_007596 3300059426 Bacteria 2216
219 2739604751 2739367654 Bacteria 6049412
220 2510843848 2510461069 Bacteria 5505000
221 2513911584 2513237144 Bacteria 7530820
222 2514000022 2513237159 Bacteria 6810126
223 2516207231 2516143018 Bacteria 6951533
224 2537900970 2537561592 Bacteria 4348607
225 2555230890 2554235227 Bacteria 3637389
226 2585203827 2582581294 Bacteria 6626667
227 2599335268 2599185156 Bacteria 5403036
228 2599719748 2599185236 Bacteria 6875203
229 2599904486 2599185292 Bacteria 6290804
230 2599907195 2599185292 Bacteria 6290804
231 2600375960 2600254933 Bacteria 4750527
232 2643861075 2643221569 Bacteria 6064337
233 2643862481 2643221569 Bacteria 6064337
234 2643980507 2643221594 Bacteria 5811388
235 2643983474 2643221594 Bacteria 5811388
236 2644124376 2643221621 Bacteria 6212786
237 2644124785 2643221621 Bacteria 6212786
238 2644729942 2643221733 Bacteria 5690728
239 2655033759 2654587600 Bacteria 3911798
240 2673822464 2671180694 Bacteria 7506943
241 2676482262 2675903059 Bacteria 8644972
242 2691511910 2690315906 Bacteria 4517044
243 2738697869 2738541272 Bacteria 6848551
244 2739326718 2738543027 Bacteria 6409078
245 2739610164 2739367655 Bacteria 4051151
246 2739610246 2739367655 Bacteria 4051151
247 2739611888 2739367655 Bacteria 4051151
248 2760308227 2758568522 Bacteria 5953541
249 2760623190 2758568621 Bacteria 5967089
250 2770199395 2767802442 Bacteria 5747986
251 2774868815 2773857925 Bacteria 6472445
252 2775657899 2775506735 Bacteria 4556596
253 2791916369 2791354901 Bacteria 8322202
254 2792623484 2791355091 Bacteria 6135441
255 2808829513 2808606357 Bacteria 4466944
256 2808893822 2808606370 Bacteria 4942454
257 2808900083 2808606372 Bacteria 4649509
258 2808900104 2808606372 Bacteria 4649509
259 2809027938 2808606394 Bacteria 6248540
260 2809032176 2808606395 Bacteria 6020352
261 2809032613 2808606395 Bacteria 6020352
262 2812318789 2811994871 Bacteria 4497550
263 2821126898 2821123053 Bacteria 7836056
264 2832007866 2832004796 Bacteria 6538017
265 2838740505 2838736955 Bacteria 5760694
266 2841843371 2841840854 Bacteria 5761912
267 2842143092 2842140634 Bacteria 5759631
268 2842523795 2842521101 Bacteria 6569494
269 2842927109 2842922631 Bacteria 5824079
270 2855733765 2855730933 Bacteria 7047938
271 2855772018 2855767633 Bacteria 7049357
272 2857469558 2857465823 Bacteria 6772595
273 2857470417 2857465823 Bacteria 6772595
274 2857535318 2857531043 Bacteria 6754041
275 2857538638 2857537821 Bacteria 5248181
276 2857542303 2857537821 Bacteria 5248181
277 2857542801 2857542790 Bacteria 5326616
278 2857543292 2857542790 Bacteria 5326616
279 2858875382 2858868258 Bacteria 7683772
280 2858955374 2858950400 Bacteria 6783797
281 2866065655 2866065130 Bacteria 6518152
282 2867317565 2867312974 Bacteria 7058875
283 2867325631 2867319477 Bacteria 7069771
284 2881417607 2881412998 Bacteria 6492157
285 2881931366 2881927736 Bacteria 3993927
286 2882462297 2882456835 Bacteria 6863978
287 2895429817 2895427314 Bacteria 13147766
288 2898907965 2898907183 Bacteria 4067722
289 2899795568 2899792073 Bacteria 4926588
290 2899805824 2899803654 Bacteria 5577784
291 2905929964 2905926851 Bacteria 4423176
292 2919392514 2919391150 Bacteria 4884741
293 2929143833 2929138655 Bacteria 5810547
294 2936371110 2936367885 Bacteria 7324495
295 2939601669 2939598168 Bacteria 4687164
296 2941485457
297 2945923372 2945920336 Bacteria 4501603
298 2945945194 2945941187 Bacteria 4682474
299 2945956436 2945956166 Bacteria 5110334
300 2946040910 2946037020 Bacteria 4900426
301 2954002156 2953998280 Bacteria 4812144
302 2974304530 2974302888 Bacteria 4369871
303 2979103401 2979100975 Bacteria 5423623
304 2980127410 2980125574 Bacteria 5567337
305 643826837 643692032 Bacteria 6891900
306 8002395344 8002392321 Bacteria 4159911
307 8005306476 8005301065 Bacteria 6614431
308 8005380309 8005376324 Bacteria 6590079
309 8005693827 8005688590 Bacteria 6610080
310 8048748455 8048746797 Bacteria 3557226
311 8054464208 8054460903 Bacteria 4872905
312 LJQas_1000340
313 JGI25156J39149_1002427
314 JGI25154J39366_1001040
315 JGI25406J46586_10002873
316 Ga0055542_1001697
317 Ga0055536_1001109
318 Ga0055541_1001569
319 Ga0058692_1013197
320 Ga0065714_10067671
321 Ga0065712_10104311
322 Ga0070676_10074869
323 Ga0070670_100000725
324 Ga0070668_100023540
325 Ga0070668_100074670
326 Ga0070669_100027605
327 Ga0070675_100002711
328 Ga0070671_100021298
329 Ga0070711_100098771
330 Ga0070708_100136752
331 Ga0070678_100007660
332 Ga0070672_100043545
333 Ga0081455_10003823
334 Ga0081538_10001432
335 Ga0081538_10001972
336 Ga0081539_10000944
337 Ga0075365_10026335
338 Ga0075365_10051191
339 Ga0075364_10000017
340 Ga0075364_10006600
341 Ga0075364_10026196
342 Ga0075364_10038308
343 Ga0075432_10001861
344 Ga0070712_100020930
345 Ga0070712_100041811
346 Ga0075428_100024727
347 Ga0075434_100170609
348 Ga0079104_1000029
349 Ga0105244_10023786
350 Ga0105247_10036959
351 Ga0114129_10008524
352 Ga0105243_10080666
353 Ga0105246_10004702
354 Ga0105246_10158734
355 Ga0157371_10035398
356 Ga0157369_10138033
357 Ga0157378_10240621
358 Ga0163162_10214238
359 Ga0157372_10164850
360 Ga0157379_10216060
361 Ga0163161_10066886
362 Ga0209784_100687
363 Ga0209566_100519
364 Ga0209674_100456
365 Ga0209646_1000022
366 Ga0209677_106401
367 Ga0209148_1000158
368 Ga0209759_1003453
369 Ga0209050_1003679
370 Ga0207697_10017098
371 Ga0207642_10040287
372 Ga0207647_10007267
373 Ga0207645_10055136
374 Ga0207643_10040981
375 Ga0207693_10003847
376 Ga0207693_10030007
377 Ga0207650_10016318
378 Ga0207706_10049810
379 Ga0207691_10000865
380 Ga0207679_10146146
381 Ga0207668_10022538
382 Ga0207678_10013871
383 Ga0207674_10074071
384 Ga0207683_10021771
385 Ga0209281_1000118
386 Ga0207428_10020419
387 Ga0307515_10017033
388 Ga0307515_10054020
389 Ga0307515_10196209
390 Ga0307408_100009285
391 Ga0307408_100009510
392 Ga0307408_100011255
393 Ga0307408_100016448
394 Ga0307408_100042948
395 Ga0307408_100125881
396 Ga0307405_10004721
397 Ga0307405_10043268
398 Ga0307413_10024648
399 Ga0307413_10036441
400 Ga0307413_10049829
401 Ga0307413_10136989
402 Ga0307410_10009846
403 Ga0307410_10016415
404 Ga0307410_10036944
405 Ga0307410_10039459
406 Ga0307410_10052430
407 Ga0307410_10064639
408 Ga0307410_10138509
409 Ga0307406_10009685
410 Ga0307407_10000968
411 Ga0307407_10100617
412 Ga0307412_10003030
413 Ga0307412_10006920
414 Ga0307412_10010900
415 Ga0307412_10017962
416 Ga0307412_10059153
417 Ga0307412_10165758
418 Ga0307409_100015351
419 Ga0307409_100071614
420 Ga0307409_100075477
421 Ga0307409_100078393
422 Ga0307416_100009014
423 Ga0307416_100017212
424 Ga0307416_100033186
425 Ga0307416_100034584
426 Ga0307416_100054949
427 Ga0307416_100077450
428 Ga0307416_100156620
429 Ga0307414_10015024
430 Ga0307414_10020873
431 Ga0307414_10096129
432 Ga0307415_100010349
433 Ga0307415_100034975
434 Ga0307415_100077962
435 Ga0307415_100174151
436 Ga0307415_100191227
437 Ga0373946_0032688
438 Ga0373927_0064668
439 Ga0395900_0174464
440 Ga0395898_0021657
441 Ga0395905_0310673
442 Ga0439436_0000771
443 Ga0439436_0015212
444 Ga0439465_0011354
445 Ga0451797_0567160
446 Ga0439433_0005661
447 Ga0439433_0016161
448 Ga0439449_0000543
449 Ga0439449_0005620
450 Ga0439434_0007974
451 Ga0453684_0107847
452 Ga0495641_0058842
453 Ga0495642_0013325
454 Ga0495642_0039729
455 Ga0495656_0001041
456 Ga0495668_0039134
457 Ga0495588_0002772
458 Ga0495670_0001465
459 Ga0495581_0020072
460 Ga0495636_0001437
461 Ga0495593_0033212
462 Ga0496101_0137038
463 Ga0496102_0008427
464 Ga0496102_0032006
465 Ga0496103_0005242
466 Ga0496103_0008252
467 Ga0496103_0011009
468 Ga0496104_0001808
469 Ga0496104_0002463
470 Ga0496104_0011280
471 Ga0496104_0011322
472 Ga0496104_0118923
473 Ga0496105_0013402
474 Ga0496105_0021323
475 Ga0496105_0204191
476 Ga0496106_0065944
477 Ga0496107_0012187
478 Ga0496108_0000521
479 Ga0496109_0000193
480 Ga0496109_0150291
481 Ga0496110_0007650
482 Ga0496110_0022597
483 Ga0496110_0193290
484 Ga0496111_0012877
485 Ga0496111_0089729
486 Ga0496112_0112016
487 Ga0496113_0000245
488 Ga0496114_0060679
489 Ga0496115_0006599
490 Ga0496117_0040634
491 Ga0496118_0033889
492 Ga0496119_0026955
493 Ga0496119_0065587
494 Ga0496120_0005138
495 Ga0496121_0000174
496 Ga0496122_0003228
497 Ga0496122_0026210
498 Ga0496123_0001818
499 Ga0496123_0011485
500 Ga0496123_0056728
501 Ga0496124_0000013
502 Ga0496124_0047178
503 Ga0496125_0000093
504 Ga0496125_0021837
505 Ga0496125_0038730
506 Ga0501032_0007933
507 Ga0501033_0026025
508 Ga0501038_0017889
509 Ga0501039_0163980
510 Ga0501043_0042306
511 Ga0501043_0140127
512 Ga0501070_0030040
513 Ga0501071_0057743
514 Ga0501072_0001346
515 Ga0501072_0055963
516 Ga0501073_0013617
517 Ga0501044_0074270
518 nmdc:mga00v17_10911_c1
519 nmdc:mga00v17_290_c1
520 nmdc:mga00v17_522_c1
521 nmdc:mga00v17_7133_c1
522 nmdc:mga0yw44_2154_c1
523 nmdc:mga0yw44_65364_c1
524 nmdc:mga05p37_7504_c2
525 Ga0495655_0009359
526 Ga0500616_0019891
527 Ga0500636_0000267
528 Ga0500636_0000882
529 Ga0590077_007596
530 2739604751
531 2510843848
532 2513911584
533 2514000022
534 2516207231
535 2537900970
536 2555230890
537 2585203827
538 2599335268
539 2599719748
540 2599904486
541 2599907195
542 2600375960
543 2643861075
544 2643862481
545 2643980507
546 2643983474
547 2644124376
548 2644124785
549 2644729942
550 2655033759
551 2673822464
552 2676482262
553 2691511910
554 2738697869
555 2739326718
556 2739610164
557 2739610246
558 2739611888
559 2760308227
560 2760623190
561 2770199395
562 2774868815
563 2775657899
564 2791916369
565 2792623484
566 2808829513
567 2808893822
568 2808900083
569 2808900104
570 2809027938
571 2809032176
572 2809032613
573 2812318789
574 2821126898
575 2832007866
576 2838740505
577 2841843371
578 2842143092
579 2842523795
580 2842927109
581 2855733765
582 2855772018
583 2857469558
584 2857470417
585 2857535318
586 2857538638
587 2857542303
588 2857542801
589 2857543292
590 2858875382
591 2858955374
592 2866065655
593 2867317565
594 2867325631
595 2881417607
596 2881931366
597 2882462297
598 2895429817
599 2898907965
600 2899795568
601 2899805824
602 2905929964
603 2919392514
604 2929143833
605 2936371110
606 2939601669
607 2941485457
608 2945923372
609 2945945194
610 2945956436
611 2946040910
612 2954002156
613 2974304530
614 2979103401
615 2980127410
616 643826837
617 8002395344
618 8005306476
619 8005380309
620 8005693827
621 8048748455
622 8054464208

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01970

TctA

Tripartite tricarboxylate transporter TctA family

16

434

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7z6n-assembly1.cif.gz_A crystal structure of zn2+-transporter bbzip in a metal-stripped state 0.254 55 443
7z6n-assembly1.cif.gz_A crystal structure of zn2+-transporter bbzip in a metal-stripped state 0.2505 55 443
7uv0-assembly1.cif.gz_A structure of the sodium/iodide symporter (nis) in complex with iodide and sodium 0.2336 24 446
7sun-assembly1.cif.gz_B atomic model of prestin from gerbil (meriones unguiculatus) 0.2298 23 393
8csl-assembly1.cif.gz_Y sub-tomogram averaging of erythrocyte ankyrin-1 complex 0.2185 6 424
ID Description Score Start End Superfamily
af_A0A1D8PLY7_278_479_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2948 186 403 1.20.1250.20
af_Q4DAY3_330_514_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2921 185 410 1.20.1250.20
af_A4I7C5_38_257_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.292 186 442 1.20.1250.20
af_Q4DAY3_330_514_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2897 185 410 1.20.1250.20
af_A4I7C5_38_257_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2801 186 442 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A260RAP4-F1-model_v4 deleted 0.8055 6 453
AF-A0A366DV98-F1-model_v4 Putative tricarboxylic transport membrane protein 0.8052 6 456 GO:0016020
AF-A0A410HBN9-F1-model_v4 deleted 0.804 6 456
AF-A0A200H7Z9-F1-model_v4 Tripartite tricarboxylate transporter TctA 0.8038 8 457 GO:0016020
AF-A0A5C5RW84-F1-model_v4 Tripartite tricarboxylate transporter permease 0.8034 8 457 GO:0016020

Map