F401476

General Info

Members Datasets Scaffolds Average Seq Length
311 182 622 590

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2857564685|2857565992
Length 593
Sequence SLILLTVFLAVLLALAWPLGKLLTRVGEGAGCRIPGMGWLARVEQLIYRVAGVNPAEGQGWKAYAASLLLFSVIGALVTYGLQRVQAWLPLNPQAMANVSPDSAFDTAVSFVANTNWQGYSGEQTMSYLTQMLVLAGQNFFSAATGIAVAYALIRGFASRSAKSIGNFWVDLTRSTLYVLLPLSLLLAVFLMAQGVIQNFQPYQQVQLLDPVSYSQPKTGADGQPLKDAQGQPVLENLSTSTQTIAMGPVASQEAIKVLGTNGGGFFNANSAHPYENPTALSNFVQMLAIFLIPTALCFAFGRMVGDQRQGWAVLGAMTVLFVICTCVVMGAEQTAHPGLQALNIDQSAGYMEGKETRFGVSASALFVAVTTAASCGAVNAMHDSLTPLGGLVPMLLMQFGEVIFGGVGSGLYGMLVFAIMAVFIAGLMIGRTPEYLGKKIQSHEMKMTAIAILVTPTLVLAGTAIAVLCEAGRAGIANPGAHGFAEILYAFSSAANNNGSAFAGLSANTPFYNTLLAIAMWFGRFAMIVPILAIAGSLAGKQRLEANAGTMPTHGGMFIGLLCGVVVLVGVLNYVPALALGPVVEHLQLYAQ

Samples

Sample ID Description Type Environment
1 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
2 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
7 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
8 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
9 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
10 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
11 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
12 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
13 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
16 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
34 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
35 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
36 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
37 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
39 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
41 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
42 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
43 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
44 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
48 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
68 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
69 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
70 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
71 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
72 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
73 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
79 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
80 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
81 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
82 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
83 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
84 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
85 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
86 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
87 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
88 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
89 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
90 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
91 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
92 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
93 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
94 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
95 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
96 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
97 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
98 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
99 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
100 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
101 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
102 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
103 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
104 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
105 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
106 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
107 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
108 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
111 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
112 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
113 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
114 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
115 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
116 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
117 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
118 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
119 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
120 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
121 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
122 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
123 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
124 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
125 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
126 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
127 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
128 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
129 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
130 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
131 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
132 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
133 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
134 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
135 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
136 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
137 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
138 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
139 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
140 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
141 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
142 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
145 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
146 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
149 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
150 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
151 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
152 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
153 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
154 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
155 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
156 2857564685 Duganella sp. R-74599 Isolate Unclassified
157 2512047030 Paraburkholderia tuberum STM678 Isolate Nodule
158 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
159 2547132374 Acidovorax radicis N35 Isolate Unclassified
160 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
161 2643221556 Massilia sp. Root1485 Isolate Unclassified
162 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
163 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
164 2643221638 Duganella sp. Root336D2 Isolate Unclassified
165 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
166 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
167 2643221664 Massilia sp. Root418 Isolate Unclassified
168 2643221684 Massilia sp. Root133 Isolate Unclassified
169 2643221717 Acidovorax sp. Root267 Isolate Unclassified
170 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
171 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
172 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
173 2818991436 Collimonas arenae 515 Isolate Unclassified
174 2842711865 Duganella sp. R-73148 Isolate Unclassified
175 2857553236 Duganella sp. R-74557 Isolate Unclassified
176 2857558681 Duganella sp. R-74565 Isolate Unclassified
177 2858688981 Cupriavidus sp. UYMMa02A Isolate Unclassified
178 2901300506 Cupriavidus sp. UYMSc13B Isolate Unclassified
179 2904424332 Duganella sp. 1411 Isolate Rhizosphere
180 2919476304 Duganella sp. 3397 Isolate Unclassified
181 2921643360 Paraburkholderia steynii HC1.1ba Isolate Nodule
182 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91
Metatranscriptomes 0.32
Isolates 8.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.22
Nodule 0.96
Rhizoplane 0.64
Rhizosphere 66.56
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1001174 3300002738 Bacteria 10024
2 JGI25164J39214_1001672 3300002772 Bacteria 4549
3 JGI25152J39213_1000097 3300002773 Bacteria 61941
4 JGI25150J39212_1000896 3300002774 Bacteria 9772
5 JGI25153J46596_10000998 3300003215 Bacteria 17178
6 JGI25161J50226_1000939 3300003374 Bacteria 10419
7 Ga0055525_1000006 3300003759 Bacteria 642912
8 Ga0055529_1000327 3300003763 Bacteria 53426
9 Ga0055526_1000033 3300003771 Bacteria 138249
10 Ga0055526_1000059 3300003771 Bacteria 108161
11 Ga0055526_1002196 3300003771 Bacteria 13373
12 Ga0055526_1010024 3300003771 Bacteria 4467
13 Ga0055537_1000255 3300003773 Bacteria 38866
14 Ga0055537_1010965 3300003773 Bacteria 1872
15 Ga0055524_1001897 3300003775 Bacteria 11345
16 Ga0055524_1002968 3300003775 Bacteria 8455
17 Ga0055524_1003190 3300003775 Bacteria 8051
18 Ga0055524_1007812 3300003775 Bacteria 4510
19 Ga0055534_1000130 3300003784 Bacteria 56637
20 Ga0055528_1000043 3300003790 Bacteria 103664
21 Ga0055530_10008811 3300003791 Bacteria 3977
22 Ga0055531_10000931 3300003794 Bacteria 23665
23 Ga0055543_1001257 3300004625 Bacteria 10457
24 Ga0065165_1004378 3300005262 Bacteria 8820
25 Ga0070682_100012180 3300005337 Bacteria 4924
26 Ga0070673_100040277 3300005364 Bacteria 3583
27 Ga0070709_10037705 3300005434 Bacteria 2954
28 Ga0070695_100000831 3300005545 Bacteria 16671
29 Ga0070665_100002315 3300005548 Bacteria 21145
30 Ga0068855_100006551 3300005563 Bacteria 14154
31 Ga0068858_100024294 3300005842 Bacteria 5648
32 Ga0105244_10005951 3300009036 Bacteria 7997
33 Ga0105244_10011942 3300009036 Bacteria 5170
34 Ga0105240_10008730 3300009093 Bacteria 14448
35 Ga0105241_10019089 3300009174 Bacteria 5056
36 Ga0105248_10002576 3300009177 Bacteria 20139
37 Ga0105237_10003466 3300009545 Bacteria 18708
38 Ga0105237_10064480 3300009545 Bacteria 3659
39 Ga0105238_10017184 3300009551 Bacteria 7348
40 Ga0105239_10034958 3300010375 Bacteria 5519
41 Ga0157369_10000067 3300013105 Bacteria 144506
42 Ga0182006_1009776 3300015261 Bacteria 4288
43 Ga0182007_10004304 3300015262 Bacteria 6481
44 Ga0182007_10018801 3300015262 Bacteria 2497
45 Ga0182005_1000003 3300015265 Bacteria 683269
46 Ga0182005_1000117 3300015265 Bacteria 57578
47 Ga0213872_10000135 3300021361 Bacteria 67262
48 Ga0213872_10000938 3300021361 Bacteria 20482
49 Ga0213872_10009282 3300021361 Bacteria 4722
50 Ga0213872_10023415 3300021361 Bacteria 2841
51 Ga0224712_10000086 3300022467 Bacteria 14399
52 Ga0209436_100257 3300025208 Bacteria 24379
53 Ga0209436_101072 3300025208 Bacteria 10292
54 Ga0209436_101113 3300025208 Bacteria 9964
55 Ga0209563_100022 3300025230 Bacteria 643318
56 Ga0207427_100368 3300025231 Bacteria 27652
57 Ga0207425_1000006 3300025245 Bacteria 808854
58 Ga0207425_1000062 3300025245 Bacteria 136118
59 Ga0207425_1008589 3300025245 Bacteria 2600
60 Ga0209646_1000047 3300025246 Bacteria 323416
61 Ga0209129_1000009 3300025258 Bacteria 633100
62 Ga0209565_1000006 3300025263 Bacteria 897294
63 Ga0209565_1000622 3300025263 Bacteria 23367
64 Ga0209565_1000784 3300025263 Bacteria 18444
65 Ga0209565_1001298 3300025263 Bacteria 11562
66 Ga0209455_1000051 3300025272 Bacteria 369818
67 Ga0209673_1000004 3300025273 Bacteria 896155
68 Ga0209130_1000927 3300025284 Bacteria 23469
69 Ga0209130_1002139 3300025284 Bacteria 10471
70 Ga0209675_1000006 3300025291 Bacteria 732267
71 Ga0209675_1000280 3300025291 Bacteria 48644
72 Ga0209675_1002100 3300025291 Bacteria 10558
73 Ga0209564_1000006 3300025295 Bacteria 1100927
74 Ga0209564_1000026 3300025295 Bacteria 519154
75 Ga0209564_1000085 3300025295 Bacteria 251509
76 Ga0209564_1000146 3300025295 Bacteria 174811
77 Ga0209564_1001080 3300025295 Bacteria 32728
78 Ga0209564_1011797 3300025295 Bacteria 3879
79 Ga0209758_1000047 3300025297 Bacteria 360971
80 Ga0209758_1000456 3300025297 Bacteria 68269
81 Ga0209050_1000064 3300025298 Bacteria 314803
82 Ga0209050_1000171 3300025298 Bacteria 150524
83 Ga0209050_1001144 3300025298 Bacteria 31864
84 Ga0209256_1000037 3300025299 Bacteria 377661
85 Ga0209256_1000376 3300025299 Bacteria 71561
86 Ga0209256_1000507 3300025299 Bacteria 57359
87 Ga0209256_1001972 3300025299 Bacteria 18495
88 Ga0209256_1002523 3300025299 Bacteria 14707
89 Ga0207426_1001027 3300025302 Bacteria 26714
90 Ga0209051_1027028 3300025303 Bacteria 2297
91 Ga0209257_1000010 3300025304 Bacteria 1158682
92 Ga0209257_1003990 3300025304 Bacteria 11915
93 Ga0207655_1009299 3300025728 Bacteria 6119
94 Ga0207655_1016208 3300025728 Bacteria 4090
95 Ga0207705_10000771 3300025909 Bacteria 26342
96 Ga0207705_10000866 3300025909 Bacteria 24804
97 Ga0207695_10015960 3300025913 Bacteria 8816
98 Ga0207671_10015817 3300025914 Bacteria 5888
99 Ga0207657_10016555 3300025919 Bacteria 7106
100 Ga0207694_10043256 3300025924 Bacteria 3476
101 Ga0207691_10038378 3300025940 Bacteria 4433
102 Ga0207711_10004187 3300025941 Bacteria 12356
103 Ga0207667_10000347 3300025949 Bacteria 63149
104 Ga0207674_10075362 3300026116 Bacteria 3384
105 Ga0207683_10001622 3300026121 Bacteria 20162
106 Ga0207683_10063792 3300026121 Bacteria 3246
107 Ga0307515_10048523 3300028794 Bacteria 6418
108 Ga0307515_10077263 3300028794 Bacteria 4400
109 Ga0265331_10011136 3300031250 Bacteria 4933
110 Ga0265327_10003295 3300031251 Bacteria 15642
111 Ga0307513_10001087 3300031456 Bacteria 39457
112 Ga0307408_100000971 3300031548 Bacteria 22238
113 Ga0307408_100001592 3300031548 Bacteria 16755
114 Ga0307408_100002803 3300031548 Bacteria 12100
115 Ga0307408_100016198 3300031548 Bacteria 4970
116 Ga0307516_10002337 3300031730 Bacteria 25506
117 Ga0373931_0001406 3300035691 Bacteria 10299
118 Ga0373937_0046038 3300036401 Bacteria 3988
119 Ga0395899_0000012 3300037312 Bacteria 517561
120 Ga0395899_0019035 3300037312 Bacteria 5217
121 Ga0395900_0004000 3300037418 Bacteria 15747
122 Ga0395900_0026706 3300037418 Bacteria 5910
123 Ga0395901_0173594 3300038443 Bacteria 2261
124 Ga0436361_0285806 3300039447 Bacteria 16514
125 Ga0436361_0875123 3300039447 Bacteria 21340
126 Ga0436361_0985114 3300039447 Bacteria 16998
127 Ga0436361_1040529 3300039447 Bacteria 13461
128 Ga0436361_1149634 3300039447 Bacteria 3158
129 Ga0466969_0007125 3300044656 Bacteria 5951
130 Ga0466972_0013225 3300044658 Bacteria 4144
131 Ga0466965_0008003 3300044683 Bacteria 4877
132 Ga0466965_0018910 3300044683 Bacteria 3306
133 Ga0466966_0000005 3300044684 Bacteria 193939
134 Ga0466966_0003504 3300044684 Bacteria 10350
135 Ga0466966_0020084 3300044684 Bacteria 4395
136 Ga0466966_0027410 3300044684 Bacteria 3715
137 Ga0466961_0000908 3300044693 Bacteria 18384
138 Ga0466961_0004690 3300044693 Bacteria 8590
139 Ga0466961_0044867 3300044693 Bacteria 2828
140 Ga0466963_0046839 3300044694 Bacteria 2852
141 Ga0466964_0008626 3300044706 Bacteria 3832
142 Ga0453684_0001700 3300044712 Bacteria 59293
143 Ga0466957_0021570 3300044842 Bacteria 3797
144 Ga0466957_0063566 3300044842 Bacteria 2269
145 Ga0466959_0001275 3300045049 Bacteria 15240
146 Ga0466958_0024492 3300045836 Bacteria 3552
147 Ga0466958_0037441 3300045836 Bacteria 2906
148 Ga0466967_0023334 3300045976 Bacteria 5067
149 Ga0495617_000958 3300046452 Bacteria 13415
150 Ga0495617_002021 3300046452 Bacteria 8449
151 Ga0495627_000066 3300046453 Bacteria 130363
152 Ga0495590_0000036 3300046457 Bacteria 129241
153 Ga0495590_0000667 3300046457 Bacteria 15871
154 Ga0495638_0000114 3300046460 Bacteria 129141
155 Ga0495638_0045625 3300046460 Bacteria 2756
156 Ga0495651_0002954 3300046462 Bacteria 13138
157 Ga0495653_0004618 3300046463 Bacteria 11140
158 Ga0495653_0013431 3300046463 Bacteria 6673
159 Ga0495650_0000105 3300046471 Bacteria 205855
160 Ga0495650_0000200 3300046471 Bacteria 130223
161 Ga0495650_0000884 3300046471 Bacteria 35361
162 Ga0495650_0012997 3300046471 Bacteria 4438
163 Ga0495605_0000015 3300046474 Bacteria 300227
164 Ga0495605_0002106 3300046474 Bacteria 12472
165 Ga0495584_0000091 3300046491 Bacteria 62543
166 Ga0495584_0000671 3300046491 Bacteria 22725
167 Ga0495584_0001943 3300046491 Bacteria 11890
168 Ga0495584_0005620 3300046491 Bacteria 6630
169 Ga0495585_0000013 3300046492 Bacteria 195993
170 Ga0495585_0000020 3300046492 Bacteria 156639
171 Ga0495585_0000025 3300046492 Bacteria 148326
172 Ga0495585_0002834 3300046492 Bacteria 12075
173 Ga0495585_0007166 3300046492 Bacteria 6846
174 Ga0495585_0011331 3300046492 Bacteria 5280
175 Ga0495585_0034159 3300046492 Bacteria 2875
176 Ga0495594_0002295 3300046499 Bacteria 9957
177 Ga0495596_0005184 3300046500 Bacteria 6201
178 Ga0495607_0020709 3300046501 Bacteria 4150
179 Ga0495607_0021512 3300046501 Bacteria 4057
180 Ga0495583_0000004 3300046506 Bacteria 655287
181 Ga0495583_0000259 3300046506 Bacteria 87422
182 Ga0495606_0000007 3300046507 Bacteria 323713
183 Ga0495606_0000744 3300046507 Bacteria 50355
184 Ga0495606_0003167 3300046507 Bacteria 17804
185 Ga0495606_0003736 3300046507 Bacteria 15860
186 Ga0495606_0004504 3300046507 Bacteria 13881
187 Ga0495606_0015564 3300046507 Bacteria 5852
188 Ga0495606_0030778 3300046507 Bacteria 3742
189 Ga0495608_0024081 3300046511 Bacteria 4166
190 Ga0495610_0003062 3300046512 Bacteria 13360
191 Ga0495610_0005668 3300046512 Bacteria 8803
192 Ga0495616_0000699 3300046513 Bacteria 24846
193 Ga0495616_0001847 3300046513 Bacteria 14335
194 Ga0495616_0007434 3300046513 Bacteria 6556
195 Ga0495616_0026584 3300046513 Bacteria 3078
196 Ga0495628_0000623 3300046516 Bacteria 32379
197 Ga0495632_0012366 3300046519 Bacteria 4926
198 Ga0495643_0000646 3300046522 Bacteria 41289
199 Ga0495643_0001182 3300046522 Bacteria 25428
200 Ga0495648_0000031 3300046524 Bacteria 213136
201 Ga0495648_0000035 3300046524 Bacteria 196251
202 Ga0495648_0000434 3300046524 Bacteria 45425
203 Ga0495666_0002926 3300046526 Bacteria 8554
204 Ga0495642_0003525 3300046528 Bacteria 6167
205 Ga0495652_0002243 3300046529 Bacteria 20215
206 Ga0495587_0001570 3300046536 Bacteria 15194
207 Ga0495609_0000236 3300046538 Bacteria 52539
208 Ga0495609_0000299 3300046538 Bacteria 45808
209 Ga0495609_0006693 3300046538 Bacteria 5847
210 Ga0495609_0008019 3300046538 Bacteria 5210
211 Ga0495597_0001219 3300046542 Bacteria 19132
212 Ga0495597_0001367 3300046542 Bacteria 17636
213 Ga0495622_0000032 3300046557 Bacteria 125538
214 Ga0495622_0002008 3300046557 Bacteria 9955
215 Ga0495622_0006239 3300046557 Bacteria 5534
216 Ga0495633_0000452 3300046558 Bacteria 42120
217 Ga0495633_0000601 3300046558 Bacteria 34582
218 Ga0495633_0006786 3300046558 Bacteria 6716
219 Ga0495633_0011807 3300046558 Bacteria 4685
220 Ga0495633_0016893 3300046558 Bacteria 3745
221 Ga0495633_0026306 3300046558 Bacteria 2856
222 Ga0495656_0001505 3300046615 Bacteria 7616
223 Ga0495668_0000008 3300046616 Bacteria 498364
224 Ga0495668_0001868 3300046616 Bacteria 18872
225 Ga0495668_0007085 3300046616 Bacteria 7217
226 Ga0495611_0000788 3300046648 Bacteria 17620
227 Ga0495625_0000273 3300046660 Bacteria 80579
228 Ga0495625_0009739 3300046660 Bacteria 7999
229 Ga0495625_0018830 3300046660 Bacteria 5376
230 Ga0495625_0036375 3300046660 Bacteria 3619
231 Ga0495625_0089954 3300046660 Bacteria 2124
232 Ga0495659_0001502 3300046664 Bacteria 7912
233 Ga0495588_0000139 3300046674 Bacteria 109955
234 Ga0495588_0007737 3300046674 Bacteria 4909
235 Ga0495646_0000348 3300046680 Bacteria 23747
236 Ga0495669_0001777 3300046684 Bacteria 8807
237 Ga0495670_0003995 3300046691 Bacteria 7237
238 Ga0495671_0010235 3300046692 Bacteria 5207
239 Ga0495649_0046384 3300046694 Bacteria 2366
240 Ga0495600_0021155 3300046809 Bacteria 4165
241 Ga0495660_0002666 3300046810 Bacteria 11301
242 Ga0495660_0003341 3300046810 Bacteria 9950
243 Ga0495660_0003471 3300046810 Bacteria 9744
244 Ga0495660_0005853 3300046810 Bacteria 7335
245 Ga0495581_0061948 3300047315 Bacteria 2161
246 Ga0495636_0000892 3300047318 Bacteria 11076
247 Ga0495672_0000427 3300047320 Bacteria 50460
248 Ga0495672_0005911 3300047320 Bacteria 9589
249 Ga0495672_0023784 3300047320 Bacteria 3958
250 Ga0495683_0000005 3300047323 Bacteria 287871
251 Ga0495683_0012333 3300047323 Bacteria 4491
252 Ga0495683_0014652 3300047323 Bacteria 4085
253 Ga0495687_000311 3300047443 Bacteria 63605
254 Ga0495687_000979 3300047443 Bacteria 28873
255 Ga0495687_001575 3300047443 Bacteria 20711
256 Ga0495687_011435 3300047443 Bacteria 4774
257 Ga0495677_0005083 3300047445 Bacteria 5006
258 Ga0495677_0020752 3300047445 Bacteria 2380
259 Ga0495685_000005 3300047447 Bacteria 112142
260 Ga0495673_0000027 3300047469 Bacteria 475440
261 Ga0495673_0000135 3300047469 Bacteria 135338
262 Ga0495681_0005260 3300047470 Bacteria 8693
263 Ga0495686_0001265 3300047472 Bacteria 28641
264 Ga0495686_0001401 3300047472 Bacteria 26636
265 Ga0495686_0014693 3300047472 Bacteria 5382
266 Ga0495593_0014290 3300047673 Bacteria 4515
267 Ga0496103_0003049 3300048906 Bacteria 10303
268 Ga0496103_0022655 3300048906 Bacteria 3782
269 Ga0496116_0056947 3300048919 Bacteria 2559
270 Ga0496124_0022464 3300048927 Bacteria 5781
271 Ga0496124_0058756 3300048927 Bacteria 3233
272 Ga0496126_0019200 3300048929 Bacteria 6737
273 Ga0495678_000001 3300049459 Bacteria 1060340
274 Ga0495678_000803 3300049459 Bacteria 28133
275 Ga0495678_003111 3300049459 Bacteria 10518
276 Ga0495678_012960 3300049459 Bacteria 3932
277 Ga0495682_0000543 3300049460 Bacteria 26102
278 Ga0495682_0000830 3300049460 Bacteria 19361
279 Ga0495682_0018197 3300049460 Bacteria 2647
280 Ga0501080_0007600 3300049742 Bacteria 9797
281 Ga0501269_000068 3300049766 Bacteria 32230
282 Ga0500618_000831 3300053125 Bacteria 16848
283 Ga0500561_0008479 3300053137 Bacteria 2049
284 Ga0500586_001675 3300053145 Bacteria 4774
285 2857565992 2857564685 Bacteria 6290584
286 2512353236 2512047030 Bacteria 9031815
287 2514043807 2513237165 Bacteria 6771773
288 2548497424 2547132374 Bacteria 5530232
289 2643788741 2643221554 Bacteria 6603920
290 2643801530 2643221556 Bacteria 7251154
291 2643968219 2643221592 Bacteria 6608788
292 2644143628 2643221625 Bacteria 6512927
293 2644211406 2643221638 Bacteria 6579467
294 2644271997 2643221648 Bacteria 6521465
295 2644304329 2643221654 Bacteria 5273570
296 2644359704 2643221664 Bacteria 7272945
297 2644471408 2643221684 Bacteria 7145183
298 2644646104 2643221717 Bacteria 5676132
299 2739612512 2739367655 Bacteria 4051151
300 2746091414 2744054900 Bacteria 8399525
301 2746097308 2744054901 Bacteria 8397047
302 2819542839 2818991436 Bacteria 5376622
303 2842712002 2842711865 Bacteria 7155354
304 2857554770 2857553236 Bacteria 6166726
305 2857559514 2857558681 Bacteria 6617694
306 2858699783 2858688981 Bacteria 8184122
307 2901305256 2901300506 Bacteria 8463898
308 2904429008 2904424332 Bacteria 7633521
309 2919479149 2919476304 Bacteria 5888696
310 2921655663 2921643360 Bacteria 11448031
311 8001526932 8001522603 Bacteria 4726425
312 JGI25154J39366_1001174
313 JGI25164J39214_1001672
314 JGI25152J39213_1000097
315 JGI25150J39212_1000896
316 JGI25153J46596_10000998
317 JGI25161J50226_1000939
318 Ga0055525_1000006
319 Ga0055529_1000327
320 Ga0055526_1000033
321 Ga0055526_1000059
322 Ga0055526_1002196
323 Ga0055526_1010024
324 Ga0055537_1000255
325 Ga0055537_1010965
326 Ga0055524_1001897
327 Ga0055524_1002968
328 Ga0055524_1003190
329 Ga0055524_1007812
330 Ga0055534_1000130
331 Ga0055528_1000043
332 Ga0055530_10008811
333 Ga0055531_10000931
334 Ga0055543_1001257
335 Ga0065165_1004378
336 Ga0070682_100012180
337 Ga0070673_100040277
338 Ga0070709_10037705
339 Ga0070695_100000831
340 Ga0070665_100002315
341 Ga0068855_100006551
342 Ga0068858_100024294
343 Ga0105244_10005951
344 Ga0105244_10011942
345 Ga0105240_10008730
346 Ga0105241_10019089
347 Ga0105248_10002576
348 Ga0105237_10003466
349 Ga0105237_10064480
350 Ga0105238_10017184
351 Ga0105239_10034958
352 Ga0157369_10000067
353 Ga0182006_1009776
354 Ga0182007_10004304
355 Ga0182007_10018801
356 Ga0182005_1000003
357 Ga0182005_1000117
358 Ga0213872_10000135
359 Ga0213872_10000938
360 Ga0213872_10009282
361 Ga0213872_10023415
362 Ga0224712_10000086
363 Ga0209436_100257
364 Ga0209436_101072
365 Ga0209436_101113
366 Ga0209563_100022
367 Ga0207427_100368
368 Ga0207425_1000006
369 Ga0207425_1000062
370 Ga0207425_1008589
371 Ga0209646_1000047
372 Ga0209129_1000009
373 Ga0209565_1000006
374 Ga0209565_1000622
375 Ga0209565_1000784
376 Ga0209565_1001298
377 Ga0209455_1000051
378 Ga0209673_1000004
379 Ga0209130_1000927
380 Ga0209130_1002139
381 Ga0209675_1000006
382 Ga0209675_1000280
383 Ga0209675_1002100
384 Ga0209564_1000006
385 Ga0209564_1000026
386 Ga0209564_1000085
387 Ga0209564_1000146
388 Ga0209564_1001080
389 Ga0209564_1011797
390 Ga0209758_1000047
391 Ga0209758_1000456
392 Ga0209050_1000064
393 Ga0209050_1000171
394 Ga0209050_1001144
395 Ga0209256_1000037
396 Ga0209256_1000376
397 Ga0209256_1000507
398 Ga0209256_1001972
399 Ga0209256_1002523
400 Ga0207426_1001027
401 Ga0209051_1027028
402 Ga0209257_1000010
403 Ga0209257_1003990
404 Ga0207655_1009299
405 Ga0207655_1016208
406 Ga0207705_10000771
407 Ga0207705_10000866
408 Ga0207695_10015960
409 Ga0207671_10015817
410 Ga0207657_10016555
411 Ga0207694_10043256
412 Ga0207691_10038378
413 Ga0207711_10004187
414 Ga0207667_10000347
415 Ga0207674_10075362
416 Ga0207683_10001622
417 Ga0207683_10063792
418 Ga0307515_10048523
419 Ga0307515_10077263
420 Ga0265331_10011136
421 Ga0265327_10003295
422 Ga0307513_10001087
423 Ga0307408_100000971
424 Ga0307408_100001592
425 Ga0307408_100002803
426 Ga0307408_100016198
427 Ga0307516_10002337
428 Ga0373931_0001406
429 Ga0373937_0046038
430 Ga0395899_0000012
431 Ga0395899_0019035
432 Ga0395900_0004000
433 Ga0395900_0026706
434 Ga0395901_0173594
435 Ga0436361_0285806
436 Ga0436361_0875123
437 Ga0436361_0985114
438 Ga0436361_1040529
439 Ga0436361_1149634
440 Ga0466969_0007125
441 Ga0466972_0013225
442 Ga0466965_0008003
443 Ga0466965_0018910
444 Ga0466966_0000005
445 Ga0466966_0003504
446 Ga0466966_0020084
447 Ga0466966_0027410
448 Ga0466961_0000908
449 Ga0466961_0004690
450 Ga0466961_0044867
451 Ga0466963_0046839
452 Ga0466964_0008626
453 Ga0453684_0001700
454 Ga0466957_0021570
455 Ga0466957_0063566
456 Ga0466959_0001275
457 Ga0466958_0024492
458 Ga0466958_0037441
459 Ga0466967_0023334
460 Ga0495617_000958
461 Ga0495617_002021
462 Ga0495627_000066
463 Ga0495590_0000036
464 Ga0495590_0000667
465 Ga0495638_0000114
466 Ga0495638_0045625
467 Ga0495651_0002954
468 Ga0495653_0004618
469 Ga0495653_0013431
470 Ga0495650_0000105
471 Ga0495650_0000200
472 Ga0495650_0000884
473 Ga0495650_0012997
474 Ga0495605_0000015
475 Ga0495605_0002106
476 Ga0495584_0000091
477 Ga0495584_0000671
478 Ga0495584_0001943
479 Ga0495584_0005620
480 Ga0495585_0000013
481 Ga0495585_0000020
482 Ga0495585_0000025
483 Ga0495585_0002834
484 Ga0495585_0007166
485 Ga0495585_0011331
486 Ga0495585_0034159
487 Ga0495594_0002295
488 Ga0495596_0005184
489 Ga0495607_0020709
490 Ga0495607_0021512
491 Ga0495583_0000004
492 Ga0495583_0000259
493 Ga0495606_0000007
494 Ga0495606_0000744
495 Ga0495606_0003167
496 Ga0495606_0003736
497 Ga0495606_0004504
498 Ga0495606_0015564
499 Ga0495606_0030778
500 Ga0495608_0024081
501 Ga0495610_0003062
502 Ga0495610_0005668
503 Ga0495616_0000699
504 Ga0495616_0001847
505 Ga0495616_0007434
506 Ga0495616_0026584
507 Ga0495628_0000623
508 Ga0495632_0012366
509 Ga0495643_0000646
510 Ga0495643_0001182
511 Ga0495648_0000031
512 Ga0495648_0000035
513 Ga0495648_0000434
514 Ga0495666_0002926
515 Ga0495642_0003525
516 Ga0495652_0002243
517 Ga0495587_0001570
518 Ga0495609_0000236
519 Ga0495609_0000299
520 Ga0495609_0006693
521 Ga0495609_0008019
522 Ga0495597_0001219
523 Ga0495597_0001367
524 Ga0495622_0000032
525 Ga0495622_0002008
526 Ga0495622_0006239
527 Ga0495633_0000452
528 Ga0495633_0000601
529 Ga0495633_0006786
530 Ga0495633_0011807
531 Ga0495633_0016893
532 Ga0495633_0026306
533 Ga0495656_0001505
534 Ga0495668_0000008
535 Ga0495668_0001868
536 Ga0495668_0007085
537 Ga0495611_0000788
538 Ga0495625_0000273
539 Ga0495625_0009739
540 Ga0495625_0018830
541 Ga0495625_0036375
542 Ga0495625_0089954
543 Ga0495659_0001502
544 Ga0495588_0000139
545 Ga0495588_0007737
546 Ga0495646_0000348
547 Ga0495669_0001777
548 Ga0495670_0003995
549 Ga0495671_0010235
550 Ga0495649_0046384
551 Ga0495600_0021155
552 Ga0495660_0002666
553 Ga0495660_0003341
554 Ga0495660_0003471
555 Ga0495660_0005853
556 Ga0495581_0061948
557 Ga0495636_0000892
558 Ga0495672_0000427
559 Ga0495672_0005911
560 Ga0495672_0023784
561 Ga0495683_0000005
562 Ga0495683_0012333
563 Ga0495683_0014652
564 Ga0495687_000311
565 Ga0495687_000979
566 Ga0495687_001575
567 Ga0495687_011435
568 Ga0495677_0005083
569 Ga0495677_0020752
570 Ga0495685_000005
571 Ga0495673_0000027
572 Ga0495673_0000135
573 Ga0495681_0005260
574 Ga0495686_0001265
575 Ga0495686_0001401
576 Ga0495686_0014693
577 Ga0495593_0014290
578 Ga0496103_0003049
579 Ga0496103_0022655
580 Ga0496116_0056947
581 Ga0496124_0022464
582 Ga0496124_0058756
583 Ga0496126_0019200
584 Ga0495678_000001
585 Ga0495678_000803
586 Ga0495678_003111
587 Ga0495678_012960
588 Ga0495682_0000543
589 Ga0495682_0000830
590 Ga0495682_0018197
591 Ga0501080_0007600
592 Ga0501269_000068
593 Ga0500618_000831
594 Ga0500561_0008479
595 Ga0500586_001675
596 2857565992
597 2512353236
598 2514043807
599 2548497424
600 2643788741
601 2643801530
602 2643968219
603 2644143628
604 2644211406
605 2644271997
606 2644304329
607 2644359704
608 2644471408
609 2644646104
610 2739612512
611 2746091414
612 2746097308
613 2819542839
614 2842712002
615 2857554770
616 2857559514
617 2858699783
618 2901305256
619 2904429008
620 2919479149
621 2921655663
622 8001526932

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03814

KdpA

Potassium-transporting ATPase A subunit

6

588

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
5mrw-assembly2.cif.gz_E structure of the kdpfabc complex 0.9588 1 600
7nnl-assembly1.cif.gz_A cryo-em structure of the kdpfabc complex in an e1-atp conformation loaded with k+ 0.9585 1 600
7nnp-assembly1.cif.gz_A rb-loaded cryo-em structure of the e1-atp kdpfabc complex. 0.9581 1 600
5mrw-assembly2.cif.gz_E structure of the kdpfabc complex 0.9555 1 600
7nnl-assembly1.cif.gz_A cryo-em structure of the kdpfabc complex in an e1-atp conformation loaded with k+ 0.9552 1 600
ID Description Score Start End Superfamily
af_B8A573_13_290_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.3614 383 547 1.10.287.70
af_F1QFA3_1_258_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.3387 383 549 1.10.287.70
af_Q9BTE6_2_97_2.40.30.130 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.322 207 252 2.40.30.130
af_Q9W189_41_417_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2897 67 318 1.20.1070.10
af_P9WGN9_168_366_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.2874 289 552 1.20.1640.10
ID Description Score Start End GO Terms
AF-A0A527FSV5-F1-model_v4 deleted 0.9828 67 163
AF-A0A7X5N520-F1-model_v4 Potassium-transporting ATPase subunit KdpA 0.9729 73 144 GO:0005886
GO:0008556
AF-A0A5R2N6Y6-F1-model_v4 Potassium-transporting ATPase subunit KdpA 0.9726 1 198 GO:0005886
GO:0008556
AF-A0A1J0A4M4-F1-model_v4 Uncharacterized protein 0.9673 75 163 GO:0005886
GO:0008556
AF-A0A2V2G0V3-F1-model_v4 Potassium-transporting ATPase subunit KdpA 0.9671 3 178 GO:0005886
GO:0008556

Map